ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur... 218 1e-56
2UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfu... 166 4e-41
3UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfu... 166 5e-41
4UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur... 166 5e-41
5UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfu... 164 1e-40
6UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfu... 157 2e-38
7UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfu... 153 4e-37
8UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur... 45 2e-04
9UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur... 44 2e-04
10UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur... 44 3e-04
11UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur... 43 7e-04
12UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur... 42 0.001
13UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur... 41 0.002
14UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur... 41 0.003
15UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur... 41 0.003
16UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur... 41 0.003
17UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur... 40 0.003
18UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur... 40 0.003
19UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur... 40 0.003
20UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur... 40 0.003
21UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur... 40 0.006
22UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur s... 39 0.008
23UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur... 39 0.008
24UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur... 39 0.010
25UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur... 39 0.010
26UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur... 39 0.013
27UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur... 38 0.017
28UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur... 38 0.022
29UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur... 38 0.022
30KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu... 31 2.1
31KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu... 31 2.1
32KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu... 31 2.1
33KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni... 31 2.1
34KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu... 31 2.1
35KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu... 31 2.1
36KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu... 31 2.1
37DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A ... 30 3.5
38MBHL_RHILV (P18636) Uptake hydrogenase large subunit (EC 1.12.99... 30 6.0
39B2_DAUCA (P37707) B2 protein 29 7.9
40ULK2_MOUSE (Q9QY01) Serine/threonine-protein kinase ULK2 (EC 2.7... 29 7.9
41SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... 29 7.9 
>UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 273

 Score =  218 bits (554), Expect = 1e-56
 Identities = 116/170 (68%), Positives = 133/170 (78%), Gaps = 5/170 (2%)
 Frame = +3

Query: 60  MLRVAGRRISSHLAWRPXXXXXXGRTPLVG-GLPGEDFPWDQN---PRFAIESPFYVAAR 227
           MLRVAGRR+SS L+WRP      G  PL G G+P  D    +    PRF+I+SPF+VA+R
Sbjct: 1   MLRVAGRRLSSSLSWRPAAAVARG--PLAGAGVPDRDDDSARGRSQPRFSIDSPFFVASR 58

Query: 228 GFSA-ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLS 404
           GFS+ E++VPR+QD GLA+LPAT AA+KNP  K+VYDEYNH+RYPPGDPSKRAFAYFVLS
Sbjct: 59  GFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLS 118

Query: 405 GGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           GGRF+YAS           SMSASKDVLALASLEVDLSSIEPGTTVTVKW
Sbjct: 119 GGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKW 168
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>UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfur subunit 3,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 3) (RISP3)
          Length = 268

 Score =  166 bits (420), Expect = 4e-41
 Identities = 94/165 (56%), Positives = 110/165 (66%)
 Frame = +3

Query: 60  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 239
           MLR+AGR++SS  A R        R P              +P  ++ S F    RGFS+
Sbjct: 1   MLRIAGRKLSSSAATRSSSAFFT-RNPFTFTDDSSSPARSPSPA-SLASQFLDQFRGFSS 58

Query: 240 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 419
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 59  NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118

Query: 420 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           YAS           SMSASKDVLALASLEVDLSSIEPGTTVTVKW
Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKW 163
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>UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 5) (RISP5)
          Length = 268

 Score =  166 bits (419), Expect = 5e-41
 Identities = 94/165 (56%), Positives = 110/165 (66%)
 Frame = +3

Query: 60  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 239
           MLR+AGR++SS  A R        R P              +P  ++ S F    RGFS+
Sbjct: 1   MLRIAGRKLSSSAAARSSSAFFT-RNPFTFTDDSSSPTRSPSPT-SLASQFLDQFRGFSS 58

Query: 240 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 419
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 59  NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118

Query: 420 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           YAS           SMSASKDVLALASLEVDLSSIEPGTTVTVKW
Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKW 163
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>UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 265

 Score =  166 bits (419), Expect = 5e-41
 Identities = 93/165 (56%), Positives = 111/165 (67%)
 Frame = +3

Query: 60  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 239
           MLRVAGRR+SS  A             +      +D    ++P  ++ S F    RGFS+
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRSSFTVT-----DDSSPARSPSPSLTSSFLDQIRGFSS 55

Query: 240 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 419
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 56  NSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 115

Query: 420 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           YAS           SMSASKDVLALASLEVDLSSIEPG+TVTVKW
Sbjct: 116 YASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKW 160
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>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 2) (RISP2)
          Length = 272

 Score =  164 bits (416), Expect = 1e-40
 Identities = 96/169 (56%), Positives = 111/169 (65%), Gaps = 4/169 (2%)
 Frame = +3

Query: 60  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRF---AIESPFYVAARG 230
           MLR+AGRR SS   W P        +  +            +PR    ++ S F    RG
Sbjct: 1   MLRIAGRRASSLSRW-PVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRG 59

Query: 231 FSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSG 407
           FS+ S V  + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDPSKRAFAYFVL+G
Sbjct: 60  FSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 118

Query: 408 GRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           GRFVYAS           SMSASKDVLALASLEVDLSSIEPGTTVTVKW
Sbjct: 119 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKW 167
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>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 1) (RISP1) (Fragment)
          Length = 258

 Score =  157 bits (397), Expect = 2e-38
 Identities = 83/121 (68%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
 Frame = +3

Query: 195 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 371
           ++ S F    RGFS+ S+ P + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDP
Sbjct: 34  SLASVFLHHTRGFSSNSVSP-AHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 92

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           SKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSSIEPGTTVTVK
Sbjct: 93  SKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVK 152

Query: 552 W 554
           W
Sbjct: 153 W 153
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>UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 4) (RISP4)
          Length = 236

 Score =  153 bits (386), Expect = 4e-37
 Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
 Frame = +3

Query: 195 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 371
           ++ S  +    GFS+ S V  + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDP
Sbjct: 12  SVTSNSFSIISGFSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 70

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           SKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSSIEPGTTVTVK
Sbjct: 71  SKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVK 130

Query: 552 W 554
           W
Sbjct: 131 W 131
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>UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 190

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 24/61 (39%), Positives = 34/61 (55%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           ++R F Y+  +G   V A             M+ S DV ALAS++VD+S +E GT +TVK
Sbjct: 14  TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVK 70

Query: 552 W 554
           W
Sbjct: 71  W 71
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>UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 231

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 384 FAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           F+YF++     + A+           +MSAS DVLA+A +EVDL++I  G  V +KW
Sbjct: 70  FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKW 126
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>UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 215

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 21/59 (35%), Positives = 35/59 (59%)
 Frame = +3

Query: 378 RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           R++AYF++     + ++           SM+A+ DVLA+A +EV+L++I  G  V VKW
Sbjct: 53  RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKW 111
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>UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 177

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +3

Query: 462 SMSASKDVLALASLEVDLSSIEPGTTVTVKW 554
           S + S DVLAL+S+EVDLS+I  G TVTVKW
Sbjct: 40  SFNPSADVLALSSIEVDLSNIAIGQTVTVKW 70
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>UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/61 (37%), Positives = 30/61 (49%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G  +T K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMTFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = +3

Query: 327 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 479
           V D Y+++R    D +K         + F+Y V +      A            SMSAS 
Sbjct: 85  VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASA 144

Query: 480 DVLALASLEVDLSSIEPGTTVTVKW 554
           DVLA+A +E++LS I  G  +  KW
Sbjct: 145 DVLAMAKIEINLSDIPEGKNMAFKW 169
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>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +      A            SMSAS DVLALA +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           ++++F+Y V +      A            SMSAS DVLA+A +EV LS I  G  +  K
Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = +3

Query: 327 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 479
           V D Y+++R    D +K         + F+Y V +      A            SMSAS 
Sbjct: 85  VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASA 144

Query: 480 DVLALASLEVDLSSIEPGTTVTVKW 554
           DVLA+A +E++LS I  G  +  KW
Sbjct: 145 DVLAMAKIEINLSDIPEGKNMAFKW 169
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>UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 228

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 27/75 (36%), Positives = 36/75 (48%)
 Frame = +3

Query: 330 YDEYNHKRYPPGDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEV 509
           + EY  K    GD S R  +Y ++     + A+           S SAS DVLA++  EV
Sbjct: 53  FSEYQTKS--TGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEV 109

Query: 510 DLSSIEPGTTVTVKW 554
           DLS I  G  + VKW
Sbjct: 110 DLSKIPEGKNLVVKW 124
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>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) (Liver regeneration-related
           protein LRRGT00195)
          Length = 274

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 187

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 23/61 (37%), Positives = 33/61 (54%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           ++R F Y+  +G   V               M+ S DV ALAS+ VD+SS+EPG  +TVK
Sbjct: 10  TRRDFLYYATAGAGAV---ATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVK 66

Query: 552 W 554
           +
Sbjct: 67  F 67
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>UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) [Contains:
           Ubiquinol-cytochrome c reductase 8 kDa protein (Complex
           III subunit IX)]
          Length = 274

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 182

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 26/73 (35%), Positives = 33/73 (45%)
 Frame = +3

Query: 336 EYNHKRYPPGDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDL 515
           E  H    PG  S R    F++ G   V A             M+ + D LALAS EVD+
Sbjct: 2   EAEHTASTPGGESSRRD--FLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDV 59

Query: 516 SSIEPGTTVTVKW 554
           S+I  G  +TV W
Sbjct: 60  SAIAEGQAITVTW 72
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>UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 372 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVK 551
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G  +  K
Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168

Query: 552 W 554
           W
Sbjct: 169 W 169
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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 271 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 326

Query: 239 SRK 231
             K
Sbjct: 327 QNK 329
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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337

Query: 239 SRK 231
             K
Sbjct: 338 QNK 340
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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337

Query: 239 SRK 231
             K
Sbjct: 338 QNK 340
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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 239 SRK 231
             K
Sbjct: 320 QNK 322
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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 239 SRK 231
             K
Sbjct: 320 QNK 322
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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRAALKCYQWLKEKIISEEGRKQ 319

Query: 239 SRK 231
             K
Sbjct: 320 QTK 322
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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -3

Query: 410 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 240
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 239 SRK 231
             K
Sbjct: 320 QNK 322
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>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2207

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +3

Query: 162  EDFPWDQNPRFAIESPFYVAARGFSAESLVPRSQDVGLAELPATAAALKNPCAKIVYDEY 341
            +D P D +PR  I+  +Y+   G   + L+          +PA    ++NP  ++ + E+
Sbjct: 1097 KDDPGDMDPRSVIDWDYYLERLGSVVQKLIT---------IPAALQKIRNPVPRVAHPEW 1147

Query: 342  NHKR 353
              +R
Sbjct: 1148 LQRR 1151
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>MBHL_RHILV (P18636) Uptake hydrogenase large subunit (EC 1.12.99.6)|
           (Hydrogenlyase) (Membrane-bound hydrogenase large
           subunit)
          Length = 596

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
 Frame = -3

Query: 359 WVPLVVILVVDNFGTGILQSSRSCWELSQPYI---LAPRNKRFSRKASGSNVEGGFNGEA 189
           WV +V  L  D   T  L  S S W LS P     +  R K+F         + G+ G A
Sbjct: 130 WVDVVSALSADPKATSALAQSISDWPLSSPGYFKDIQTRLKKFVESGQLGPFKNGYWGNA 189

Query: 188 RILIPGE 168
              +P E
Sbjct: 190 SYKLPPE 196
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>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 412 LPPLNTK*AKARLLGSPGGYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 260
           LPP      +A   G P    L+LY+  T    G F AA+  G++ +PT+W
Sbjct: 97  LPPRYRDSVRAITPGLP----LFLYNYSTHQLHGVFEAASFGGTNIDPTAW 143
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>ULK2_MOUSE (Q9QY01) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)|
           (Unc-51-like kinase 2) (Serine/threonine-protein kinase
           Unc51.2)
          Length = 1037

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
 Frame = -2

Query: 528 AQYLTGQPQGKQAQAH-----PYLLTYSGQTL---GRANATTRHTQISHRSTQSRQRHA- 376
           +Q   G PQG +A++      P   T + Q+L    R  +    T I     + R++H+ 
Sbjct: 489 SQCCCGHPQGHEARSRHSSGSPVPQTQAPQSLLLGARLQSAPTLTDIYQNKQKLRKQHSD 548

Query: 375 --CWGHQVGTSCGYTRRRQFWHRDSSEQPQLLGAQPTLHPGSS 253
             C  H      GY+   Q        +P  LG  PT H GSS
Sbjct: 549 PVCPSH---AGAGYSYSPQ------PSRPGSLGTSPTKHTGSS 582
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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/91 (24%), Positives = 35/91 (38%)
 Frame = -2

Query: 459 GQTLGRANATTRHTQISHRSTQSRQRHACWGHQVGTSCGYTRRRQFWHRDSSEQPQLLGA 280
           G  +   N+T    ++  R  + R RH  +G    T C     RQFW  D  E       
Sbjct: 68  GIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKC----PRQFWGPDCKE------- 116

Query: 279 QPTLHPGSSEQEIQPKSLWQQRRRGIQWRSA 187
           + + HP    +++  +     RR G +   A
Sbjct: 117 RCSCHPHGQCEDVTGQCTCHARRWGARCEHA 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,478,371
Number of Sequences: 219361
Number of extensions: 1523883
Number of successful extensions: 4689
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4680
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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