ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105531.1| Zea mays PCO113958 mRNA sequence 226 6e-56
2ref|XM_466001.1| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
3dbj|AK102815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence 137 4e-29
8gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein... 137 4e-29
9ref|XM_472343.1| Oryza sativa (japonica cultivar-group), predic... 125 2e-25
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
11dbj|AK059519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
12emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 125 2e-25
13gb|AY109584.1| Zea mays CL2436_1 mRNA sequence 111 2e-21
14gb|L16812.1|TOBFESC Nicotiana tabacum clone 36.14 Rieske iron-su... 105 2e-19
15gb|L16810.1|TOBFESA Nicotiana tabacum clone 17.12 Rieske iron-su... 105 2e-19
16gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence 98 4e-17
17dbj|D21116.1|RICSS126 Oryza sativa mRNA for Rieske Fe-S protein,... 96 1e-16
18gb|L16811.1|TOBFESB Nicotiana tabacum clone 8.8 Rieske iron-sulf... 88 4e-14
19gb|M77225.1|TOBRFESP Nicotiana tabacum mitochondrial Rieske Fe-S... 82 2e-12
20gb|L16813.1|TOBFESD Nicotiana tabacum clone 32.10 Rieske iron-su... 72 2e-09
21ref|NM_121346.2| Arabidopsis thaliana oxidoreductase/ ubiquinol-... 68 3e-08
22emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, B... 68 3e-08
23gb|AF375413.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, co... 68 3e-08
24gb|AY066055.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, co... 68 3e-08
25emb|BX830387.1|CNS0A1JK Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
26emb|BX829878.1|CNS0A1B9 Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
27emb|BX829847.1|CNS0A1CH Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
28emb|BX833733.1|CNS0A0BW Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
29gb|AY085370.1| Arabidopsis thaliana clone 1482 mRNA, complete se... 68 3e-08
30ref|NM_121347.3| Arabidopsis thaliana oxidoreductase/ ubiquinol-... 62 2e-06
31gb|AY081510.1| Arabidopsis thaliana ubiquinol--cytochrome-c redu... 62 2e-06
32gb|AF370533.1|AF370533 Arabidopsis thaliana ubiquinol--cytochrom... 62 2e-06
33emb|BX829960.1|CNS0A1KF Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
34emb|BX829679.1|CNS0A1GR Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
35gb|AY086148.1| Arabidopsis thaliana clone 21819 mRNA, complete s... 62 2e-06
36dbj|AK221169.1| Arabidopsis thaliana mRNA for ubiquinol--cytochr... 58 3e-05
37gb|DQ207870.1| Solanum tuberosum clone 087E11 rieske iron-sulfur... 56 1e-04
38gb|BT014059.1| Lycopersicon esculentum clone 133157F, mRNA sequence 56 1e-04
39emb|BX830982.1|CNS0A0P7 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
40gb|CP000249.1| Frankia sp. CcI3, complete genome 46 0.12
41gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome... 44 0.48
42dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
43dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
44gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, comple... 44 0.48
45gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 42 1.9
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
48gb|AF532115.1| Mus musculus strain 129/SvJ BAC clone citb553n23 ... 42 1.9
49gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 f... 42 1.9
50dbj|AB088974.1| Uncultured Eubacteriaceae bacterium gene for 16S... 42 1.9
51dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
52dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
53dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
54gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 ... 42 1.9
55emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 42 1.9
56emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chrom... 42 1.9
57gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosom... 40 7.5
58ref|XM_480201.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
59ref|XM_517309.1| PREDICTED: Pan troglodytes similar to KIAA1458 ... 40 7.5
60ref|NM_194142.2| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
61gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
62gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.5
63gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
64ref|XM_854345.1| PREDICTED: Canis familiaris similar to SUMO1/se... 40 7.5
65ref|XM_844542.1| PREDICTED: Canis familiaris similar to SUMO1/se... 40 7.5
66emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on ch... 40 7.5
67emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F1... 40 7.5
68emb|AJ720647.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.5
69ref|NM_001007851.1| Gallus gallus Ras association (RalGDS/AF-6) ... 40 7.5
70ref|XM_938882.1| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1... 40 7.5
71ref|XM_044921.6| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1... 40 7.5
72dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
73dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
74dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
75dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
76dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
77gb|AF140553.1|AF140553 Avena sativa DNA-binding protein WRKY3 (w... 40 7.5
78gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
79emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on ch... 40 7.5
80emb|CT030702.11| Mouse DNA sequence from clone RP23-76I16 on chr... 40 7.5
81emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on ch... 40 7.5
82gb|M94265.1|CRESAGLE Chlamydomonas reinhardtii cell wall lytic e... 40 7.5
83dbj|D10542.1|CREGLE C. reinhardtii mRNA for gamete lytic enzyme ... 40 7.5
84dbj|AB058413.1| Chlamydomonas reinhardtii mmp1 mRNA for gametoly... 40 7.5
85dbj|AB058411.1| Chlamydomonas reinhardtii mmp1 gene for gametoly... 40 7.5 
>gb|AY105531.1| Zea mays PCO113958 mRNA sequence
          Length = 1217

 Score =  226 bits (114), Expect = 6e-56
 Identities = 306/370 (82%)
 Strand = Plus / Plus

                                                                       
Query: 187 cgcgcttcgccattgaatcccccttctacgttgctgccagaggcttttcggctgaatctc 246
           |||| |||||||| ||||| ||||||| ||  ||||||||||| ||||| || ||  |||
Sbjct: 277 cgcgtttcgccatcgaatctcccttcttcgccgctgccagagggttttcagcagagactc 336

                                                                       
Query: 247 ttgttccgaggagccaggatgtagggttggctgagctcccagcaactgcggctgctctga 306
           ||| ||| || | ||||||||| || ||  |||||||||||||||||| ||| ||| |||
Sbjct: 337 ttgctccaagaaaccaggatgtgggcttatctgagctcccagcaactgtggcagctgtga 396

                                                                       
Query: 307 agaatccctgtgccaaaattgtctacgacgagtataaccacaagaggtacccacctggtg 366
           |||||||  |||  ||||| || || || |||||||||||  || | ||||||||||| |
Sbjct: 397 agaatccaagtggaaaaatcgtgtatgatgagtataaccatgagcgctacccacctggag 456

                                                                       
Query: 367 accccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtgtatgcct 426
           |||||||||||||||| ||||||||||||||| |||| |||||||| ||  | || || |
Sbjct: 457 accccagcaagcgtgcatttgcctactttgtgctgagtggtgggaggttcatttacgcat 516

                                                                       
Query: 427 cgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgc 486
           | ||| ||||  | |||||| |||| |||||||| || |||||||||||||||||||| |
Sbjct: 517 ctttgctgcgacttctcgtcttaaaatttgtcctaagcatgtcagcaagtaaggatgttc 576

                                                                       
Query: 487 ttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccactgtgactg 546
           | |||||||| || |||||||||||||| ||||| |||||||| || ||||| ||||| |
Sbjct: 577 tcgcgcttgcctcacttgaggttgacctctcaagcattgagcctggaaccacggtgacgg 636

                     
Query: 547 taaagtggcg 556
           | ||||||||
Sbjct: 637 tgaagtggcg 646



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 96  ctcgcatggcgccccgccgcggccgcctc 124
           ||||| |||||||||||||| ||||||||
Sbjct: 180 ctcgcctggcgccccgccgccgccgcctc 208
to top
>ref|XM_466001.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1157

 Score =  141 bits (71), Expect = 3e-30
 Identities = 296/371 (79%)
 Strand = Plus / Plus

                                                                       
Query: 186 ccgcgcttcgccattgaatcccccttctacgttgctgccagaggcttttcggctgaatct 245
           |||||||||||| | || ||||| |||| ||  ||| | || ||||||||  | ||| ||
Sbjct: 223 ccgcgcttcgccgtggattccccgttcttcgccgcttcgaggggcttttcctcagaaact 282

                                                                       
Query: 246 cttgttccgaggagccaggatgtagggttggctgagctcccagcaactgcggctgctctg 305
           |||||||| |||| |||||||||| | ||| ||||||| |||||||| | | | ||| ||
Sbjct: 283 cttgttccaaggaaccaggatgtaagcttgactgagcttccagcaacagtgtcagctgtg 342

                                                                       
Query: 306 aagaatccctgtgccaaaattgtctacgacgagtataaccacaagaggtacccacctggt 365
           ||||||||| |||| || ||||| || || || ||||||||  | || ||||  || |||
Sbjct: 343 aagaatcccagtgcaaagattgtatatgatgaatataaccatgaaagataccagccaggt 402

                                                                       
Query: 366 gaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtgtatgcc 425
           ||||| || ||  | || ||||| |||||||||||||| ||||| || ||| | ||||| 
Sbjct: 403 gacccaagtaaaagagcgtttgcatactttgtgttgagtggtggaaggtttatttatgct 462

                                                                       
Query: 426 tcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtg 485
           ||| |  |||| ||||||||  | |||||||| || || ||||| || || |||||||| 
Sbjct: 463 tcgcttctgcgcttgctcgttttgaagtttgttctaagcatgtctgctagcaaggatgtt 522

                                                                       
Query: 486 cttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccactgtgact 545
           ||||| ||||||||||||||||| || || || ||||||||||| || ||||||||||| 
Sbjct: 523 cttgctcttgcttcccttgaggtggatctctctagtattgagcctggcaccactgtgacc 582

                      
Query: 546 gtaaagtggcg 556
           || ||||||||
Sbjct: 583 gtgaagtggcg 593



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  cctcgcatggcgccccgccgcggc 118
           |||||| |||||||||||||||||
Sbjct: 126 cctcgcctggcgccccgccgcggc 149
to top
>dbj|AK102815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M09, full
           insert sequence
          Length = 1157

 Score =  141 bits (71), Expect = 3e-30
 Identities = 296/371 (79%)
 Strand = Plus / Plus

                                                                       
Query: 186 ccgcgcttcgccattgaatcccccttctacgttgctgccagaggcttttcggctgaatct 245
           |||||||||||| | || ||||| |||| ||  ||| | || ||||||||  | ||| ||
Sbjct: 223 ccgcgcttcgccgtggattccccgttcttcgccgcttcgaggggcttttcctcagaaact 282

                                                                       
Query: 246 cttgttccgaggagccaggatgtagggttggctgagctcccagcaactgcggctgctctg 305
           |||||||| |||| |||||||||| | ||| ||||||| |||||||| | | | ||| ||
Sbjct: 283 cttgttccaaggaaccaggatgtaagcttgactgagcttccagcaacagtgtcagctgtg 342

                                                                       
Query: 306 aagaatccctgtgccaaaattgtctacgacgagtataaccacaagaggtacccacctggt 365
           ||||||||| |||| || ||||| || || || ||||||||  | || ||||  || |||
Sbjct: 343 aagaatcccagtgcaaagattgtatatgatgaatataaccatgaaagataccagccaggt 402

                                                                       
Query: 366 gaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtgtatgcc 425
           ||||| || ||  | || ||||| |||||||||||||| ||||| || ||| | ||||| 
Sbjct: 403 gacccaagtaaaagagcgtttgcatactttgtgttgagtggtggaaggtttatttatgct 462

                                                                       
Query: 426 tcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtg 485
           ||| |  |||| ||||||||  | |||||||| || || ||||| || || |||||||| 
Sbjct: 463 tcgcttctgcgcttgctcgttttgaagtttgttctaagcatgtctgctagcaaggatgtt 522

                                                                       
Query: 486 cttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccactgtgact 545
           ||||| ||||||||||||||||| || || || ||||||||||| || ||||||||||| 
Sbjct: 523 cttgctcttgcttcccttgaggtggatctctctagtattgagcctggcaccactgtgacc 582

                      
Query: 546 gtaaagtggcg 556
           || ||||||||
Sbjct: 583 gtgaagtggcg 593



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  cctcgcatggcgccccgccgcggc 118
           |||||| |||||||||||||||||
Sbjct: 126 cctcgcctggcgccccgccgcggc 149
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  139 bits (70), Expect = 1e-29
 Identities = 265/330 (80%)
 Strand = Plus / Minus

                                                                            
Query: 227      aggcttttcggctgaatctcttgttccgaggagccaggatgtagggttggctgagctccc 286
                |||||||||  | ||| |||||||||| |||| |||||||||| | ||| ||||||| ||
Sbjct: 19001236 aggcttttcctcagaaactcttgttccaaggaaccaggatgtaagcttgactgagcttcc 19001177

                                                                            
Query: 287      agcaactgcggctgctctgaagaatccctgtgccaaaattgtctacgacgagtataacca 346
                |||||| | | | ||| ||||||||||| |||| || ||||| || || || ||||||||
Sbjct: 19001176 agcaacagtgtcagctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 19001117

                                                                            
Query: 347      caagaggtacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcgg 406
                  | || ||||  || |||||||| || ||  | || ||||| |||||||||||||| ||
Sbjct: 19001116 tgaaagataccagccaggtgacccaagtaaaagagcgtttgcatactttgtgttgagtgg 19001057

                                                                            
Query: 407      tgggagatttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtat 466
                ||| || ||| | ||||| ||| |  |||| ||||||||  | |||||||| || || ||
Sbjct: 19001056 tggaaggtttatttatgcttcgcttctgcgcttgctcgttttgaagtttgttctaagcat 19000997

                                                                            
Query: 467      gtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattga 526
                ||| || || |||||||| ||||| ||||||||||||||||| || || || ||||||||
Sbjct: 19000996 gtctgctagcaaggatgttcttgctcttgcttcccttgaggtggatctctctagtattga 19000937

                                              
Query: 527      gcccggtaccactgtgactgtaaagtggcg 556
                ||| || ||||||||||| || ||||||||
Sbjct: 19000936 gcctggcaccactgtgaccgtgaagtggcg 19000907



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 109     ccgccgcggccgcctccgccgg 130
               ||||||||||||||||||||||
Sbjct: 3164695 ccgccgcggccgcctccgccgg 3164674



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 95       cctcgcatggcgccccgccgcggc 118
                |||||| |||||||||||||||||
Sbjct: 19003461 cctcgcctggcgccccgccgcggc 19003438
to top
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0003H22
          Length = 68256

 Score =  139 bits (70), Expect = 1e-29
 Identities = 265/330 (80%)
 Strand = Plus / Minus

                                                                         
Query: 227   aggcttttcggctgaatctcttgttccgaggagccaggatgtagggttggctgagctccc 286
             |||||||||  | ||| |||||||||| |||| |||||||||| | ||| ||||||| ||
Sbjct: 56557 aggcttttcctcagaaactcttgttccaaggaaccaggatgtaagcttgactgagcttcc 56498

                                                                         
Query: 287   agcaactgcggctgctctgaagaatccctgtgccaaaattgtctacgacgagtataacca 346
             |||||| | | | ||| ||||||||||| |||| || ||||| || || || ||||||||
Sbjct: 56497 agcaacagtgtcagctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 56438

                                                                         
Query: 347   caagaggtacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcgg 406
               | || ||||  || |||||||| || ||  | || ||||| |||||||||||||| ||
Sbjct: 56437 tgaaagataccagccaggtgacccaagtaaaagagcgtttgcatactttgtgttgagtgg 56378

                                                                         
Query: 407   tgggagatttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtat 466
             ||| || ||| | ||||| ||| |  |||| ||||||||  | |||||||| || || ||
Sbjct: 56377 tggaaggtttatttatgcttcgcttctgcgcttgctcgttttgaagtttgttctaagcat 56318

                                                                         
Query: 467   gtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattga 526
             ||| || || |||||||| ||||| ||||||||||||||||| || || || ||||||||
Sbjct: 56317 gtctgctagcaaggatgttcttgctcttgcttcccttgaggtggatctctctagtattga 56258

                                           
Query: 527   gcccggtaccactgtgactgtaaagtggcg 556
             ||| || ||||||||||| || ||||||||
Sbjct: 56257 gcctggcaccactgtgaccgtgaagtggcg 56228



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    cctcgcatggcgccccgccgcggc 118
             |||||| |||||||||||||||||
Sbjct: 58782 cctcgcctggcgccccgccgcggc 58759
to top
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0047A17
          Length = 149142

 Score =  139 bits (70), Expect = 1e-29
 Identities = 265/330 (80%)
 Strand = Plus / Minus

                                                                        
Query: 227  aggcttttcggctgaatctcttgttccgaggagccaggatgtagggttggctgagctccc 286
            |||||||||  | ||| |||||||||| |||| |||||||||| | ||| ||||||| ||
Sbjct: 6757 aggcttttcctcagaaactcttgttccaaggaaccaggatgtaagcttgactgagcttcc 6698

                                                                        
Query: 287  agcaactgcggctgctctgaagaatccctgtgccaaaattgtctacgacgagtataacca 346
            |||||| | | | ||| ||||||||||| |||| || ||||| || || || ||||||||
Sbjct: 6697 agcaacagtgtcagctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 6638

                                                                        
Query: 347  caagaggtacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcgg 406
              | || ||||  || |||||||| || ||  | || ||||| |||||||||||||| ||
Sbjct: 6637 tgaaagataccagccaggtgacccaagtaaaagagcgtttgcatactttgtgttgagtgg 6578

                                                                        
Query: 407  tgggagatttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtat 466
            ||| || ||| | ||||| ||| |  |||| ||||||||  | |||||||| || || ||
Sbjct: 6577 tggaaggtttatttatgcttcgcttctgcgcttgctcgttttgaagtttgttctaagcat 6518

                                                                        
Query: 467  gtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattga 526
            ||| || || |||||||| ||||| ||||||||||||||||| || || || ||||||||
Sbjct: 6517 gtctgctagcaaggatgttcttgctcttgcttcccttgaggtggatctctctagtattga 6458

                                          
Query: 527  gcccggtaccactgtgactgtaaagtggcg 556
            ||| || ||||||||||| || ||||||||
Sbjct: 6457 gcctggcaccactgtgaccgtgaagtggcg 6428



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   cctcgcatggcgccccgccgcggc 118
            |||||| |||||||||||||||||
Sbjct: 8982 cctcgcctggcgccccgccgcggc 8959
to top
>gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence
          Length = 971

 Score =  137 bits (69), Expect = 4e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 360 cctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtg 419
           ||||| || |||||||||||||| ||||| ||||||||  |||| |||||||| ||  | 
Sbjct: 274 cctggagatcccagcaagcgtgcatttgcttactttgtcctgagtggtgggaggttcata 333

                                                                       
Query: 420 tatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaag 479
           ||||| ||  |||||||| | |||||  | |||||||||||||| |||||||||||||||
Sbjct: 334 tatgcatcactgttgcgtctcctcgtattgaagtttgtcctgagcatgtcagcaagtaag 393

                                                                       
Query: 480 gatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccact 539
           || |||||||| |||||||| || ||||| ||||| || || |||||||| || ||||| 
Sbjct: 394 gacgtgcttgcccttgcttcactcgaggtggacctctccagcattgagccagggaccacg 453

                            
Query: 540 gtgactgtaaagtggcg 556
           |||||||| ||||||||
Sbjct: 454 gtgactgtgaagtggcg 470



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 276 gctgagctcccagcaactgcggctgctctgaagaatcc 313
           ||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 190 gctgacctcccagcaactgtggctgctgtgaagaatcc 227
to top
>gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein mRNA, complete cds
          Length = 1197

 Score =  137 bits (69), Expect = 4e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 360 cctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtg 419
           ||||| || |||||||||||||||||||| ||||||||  |||| |||||||| ||  | 
Sbjct: 417 cctggagatcccagcaagcgtgcctttgcatactttgtcctgagtggtgggaggttcata 476

                                                                       
Query: 420 tatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaag 479
           ||||| ||  || ||||| | ||||| || |||||||||||||| ||||||||||| |||
Sbjct: 477 tatgcatcactgctgcgtcttctcgtactgaagtttgtcctgagcatgtcagcaagcaag 536

                                                                       
Query: 480 gatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccact 539
           ||||||||||| |||||||| |||||||| ||||| || || || ||||| || ||||| 
Sbjct: 537 gatgtgcttgcccttgcttcacttgaggtggacctctccagcatcgagccagggaccaca 596

                            
Query: 540 gtgactgtaaagtggcg 556
           ||||| || ||||||||
Sbjct: 597 gtgaccgtgaagtggcg 613



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 276 gctgagctcccagcaactgcggctgctctgaagaatcc 313
           ||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 333 gctgacctcccagcaactgtggctgctgtgaagaatcc 370
to top
>ref|XM_472343.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 837

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                       
Query: 358 cacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttg 417
           ||||||| || |||||||||||||| ||||| ||||||||  | || |||||||||||  
Sbjct: 323 cacctggggatcccagcaagcgtgcatttgcttactttgttctaagtggtgggagattca 382

                                                                       
Query: 418 tgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagta 477
           | ||||| |||||| ||||  | |||||  | || || || ||||| ||||| |||||||
Sbjct: 383 tctatgcatcgttgctgcggctcctcgtattgaaattcgtgctgagcatgtctgcaagta 442

                                                                       
Query: 478 aggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacca 537
           |||| |||||||||||||||||||| ||||| || || ||||| |||||||| |||||||
Sbjct: 443 aggacgtgcttgcgcttgcttccctggaggtggatctctcaagcattgagcctggtacca 502

                              
Query: 538 ctgtgactgtaaagtggcg 556
           | ||||| || ||||||||
Sbjct: 503 cagtgacggtgaagtggcg 521
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                            
Query: 358      cacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttg 417
                ||||||| || |||||||||||||| ||||| ||||||||  | || |||||||||||  
Sbjct: 19695746 cacctggggatcccagcaagcgtgcatttgcttactttgttctaagtggtgggagattca 19695805

                                                                            
Query: 418      tgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagta 477
                | ||||| |||||| ||||  | |||||  | || || || ||||| ||||| |||||||
Sbjct: 19695806 tctatgcatcgttgctgcggctcctcgtattgaaattcgtgctgagcatgtctgcaagta 19695865

                                                                            
Query: 478      aggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacca 537
                |||| |||||||||||||||||||| ||||| || || ||||| |||||||| |||||||
Sbjct: 19695866 aggacgtgcttgcgcttgcttccctggaggtggatctctcaagcattgagcctggtacca 19695925

                                   
Query: 538      ctgtgactgtaaagtggcg 556
                | ||||| || ||||||||
Sbjct: 19695926 cagtgacggtgaagtggcg 19695944
to top
>dbj|AK059519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C04, full
           insert sequence
          Length = 1242

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                       
Query: 358 cacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttg 417
           ||||||| || |||||||||||||| ||||| ||||||||  | || |||||||||||  
Sbjct: 452 cacctggggatcccagcaagcgtgcatttgcttactttgttctaagtggtgggagattca 511

                                                                       
Query: 418 tgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagta 477
           | ||||| |||||| ||||  | |||||  | || || || ||||| ||||| |||||||
Sbjct: 512 tctatgcatcgttgctgcggctcctcgtattgaaattcgtgctgagcatgtctgcaagta 571

                                                                       
Query: 478 aggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacca 537
           |||| |||||||||||||||||||| ||||| || || ||||| |||||||| |||||||
Sbjct: 572 aggacgtgcttgcgcttgcttccctggaggtggatctctcaagcattgagcctggtacca 631

                              
Query: 538 ctgtgactgtaaagtggcg 556
           | ||||| || ||||||||
Sbjct: 632 cagtgacggtgaagtggcg 650
to top
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
              complete sequence
          Length = 166410

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                          
Query: 358    cacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttg 417
              ||||||| || |||||||||||||| ||||| ||||||||  | || |||||||||||  
Sbjct: 146472 cacctggggatcccagcaagcgtgcatttgcttactttgttctaagtggtgggagattca 146531

                                                                          
Query: 418    tgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagta 477
              | ||||| |||||| ||||  | |||||  | || || || ||||| ||||| |||||||
Sbjct: 146532 tctatgcatcgttgctgcggctcctcgtattgaaattcgtgctgagcatgtctgcaagta 146591

                                                                          
Query: 478    aggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacca 537
              |||| |||||||||||||||||||| ||||| || || ||||| |||||||| |||||||
Sbjct: 146592 aggacgtgcttgcgcttgcttccctggaggtggatctctcaagcattgagcctggtacca 146651

                                 
Query: 538    ctgtgactgtaaagtggcg 556
              | ||||| || ||||||||
Sbjct: 146652 cagtgacggtgaagtggcg 146670
to top
>gb|AY109584.1| Zea mays CL2436_1 mRNA sequence
          Length = 1746

 Score =  111 bits (56), Expect = 2e-21
 Identities = 161/197 (81%)
 Strand = Plus / Plus

                                                                        
Query: 360  cctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtg 419
            ||||| || |||||||||||||||||||| ||||||||  |||| |||||||| ||  | 
Sbjct: 926  cctggagatcccagcaagcgtgcctttgcatactttgtcctgagtggtgggaggttcata 985

                                                                        
Query: 420  tatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaag 479
            ||||| ||  || ||||| | ||||| || ||||||||||||     ||||||||| |||
Sbjct: 986  tatgcatcactgctgcgtcttctcgtactgaagtttgtcctgnnncagtcagcaagcaag 1045

                                                                        
Query: 480  gatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccact 539
            ||||||||||| |||||||| |||||||| ||||| || || || ||||| || ||||| 
Sbjct: 1046 gatgtgcttgcccttgcttcacttgaggtggacctctccagcatcgagccagggaccaca 1105

                             
Query: 540  gtgactgtaaagtggcg 556
            ||||| || ||||||||
Sbjct: 1106 gtgaccgtgaagtggcg 1122



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 276 gctgagctcccagcaactgcggctgctctgaagaatcc 313
           ||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 842 gctgacctcccagcaactgtggctgctgtgaagaatcc 879
to top
>gb|L16812.1|TOBFESC Nicotiana tabacum clone 36.14 Rieske iron-sulfur protein mRNA,
           complete cds; mitochondrial
          Length = 1286

 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                       
Query: 352 ggtacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtggga 411
           |||| ||||||||||| || ||||| ||||| |||||||||||||| ||||  || || |
Sbjct: 509 ggtatccacctggtgatccaagcaaacgtgcatttgcctactttgtcttgacaggaggta 568

                                                                       
Query: 412 gatttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcag 471
           | ||||| |||||||| ||| ||||| | ||  | || ||||||||  |||| ||||| |
Sbjct: 569 ggtttgtctatgcctcattggtgcgtctcctgattcttaagtttgttttgagcatgtctg 628

                                                                       
Query: 472 caagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccg 531
           | ||||||||||| ||||| |||||||| ||||| || || || || || ||||| || |
Sbjct: 629 ccagtaaggatgttcttgcccttgcttcacttgaagtggatctctccagcattgaacctg 688

                                    
Query: 532 gtaccactgtgactgtaaagtggcg 556
           |||| ||||| ||||||||||||||
Sbjct: 689 gtacaactgttactgtaaagtggcg 713
to top
>gb|L16810.1|TOBFESA Nicotiana tabacum clone 17.12 Rieske iron-sulfur protein mRNA,
           complete cds; mitochondrial
          Length = 1210

 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                       
Query: 352 ggtacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtggga 411
           |||| ||||||||||| || ||||| ||||| |||||||||||||| ||||  || || |
Sbjct: 449 ggtatccacctggtgatccaagcaaacgtgcatttgcctactttgtcttgacaggaggta 508

                                                                       
Query: 412 gatttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcag 471
           | ||||| |||||||| ||| ||||| | ||  | || ||||||||  |||| ||||| |
Sbjct: 509 ggtttgtctatgcctcattggtgcgtctcctgattcttaagtttgttttgagcatgtctg 568

                                                                       
Query: 472 caagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccg 531
           | ||||||||||| ||||| |||||||| ||||| || || || || || ||||| || |
Sbjct: 569 ccagtaaggatgttcttgcccttgcttcacttgaagtggatctctccagcattgaacctg 628

                                    
Query: 532 gtaccactgtgactgtaaagtggcg 556
           |||| ||||| ||||||||||||||
Sbjct: 629 gtacaactgttactgtaaagtggcg 653
to top
>gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence
          Length = 1172

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Plus

                                                                       
Query: 360 cctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtg 419
           ||||| || |||||||||||||| ||||| ||||||||  |||| ||||||||  |  | 
Sbjct: 386 cctggagatcccagcaagcgtgcatttgcttactttgtcctgagtggtgggaggctcata 445

                                                                       
Query: 420 tatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaag 479
           ||||| ||  || ||||| | |||||  | ||||||| |||||| ||||||| |||||||
Sbjct: 446 tatgcatcactgctgcgtctcctcgtattgaagtttgccctgagcatgtcaggaagtaag 505

                                                                       
Query: 480 gatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccact 539
           || |||||||| |||||||| || ||||| ||||| |  || |||||||| || ||||| 
Sbjct: 506 gacgtgcttgcccttgcttcactcgaggtggacctctgcagcattgagccagggaccacg 565

                            
Query: 540 gtgactgtaaagtggcg 556
           |||||||| ||||||||
Sbjct: 566 gtgactgtgaagtggcg 582



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 276 gctgagctcccagcaactgcggctgctctgaagaatcc 313
           ||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 302 gctgacctcccagcaactgtggctgctgtgaagaatcc 339
to top
>dbj|D21116.1|RICSS126 Oryza sativa mRNA for Rieske Fe-S protein, partial sequence
          Length = 299

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 459 ctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacctgtca 518
           ||||| ||||| ||||||||||  |||||||||||||||||||| ||||| || || |||
Sbjct: 19  ctgagcatgtctgcaagtaaggncgtgcttgcgcttgcttccctggaggtggatctctca 78

                                                 
Query: 519 agtattgagcccggtaccactgtgactgtaaagtggcg 556
           || |||||||| |||||||| ||||| || ||||||||
Sbjct: 79  agcattgagcctggtaccacngtgacggtgaagtggcg 116
to top
>gb|L16811.1|TOBFESB Nicotiana tabacum clone 8.8 Rieske iron-sulfur protein mRNA,
           complete cds; mitochondrial
          Length = 1202

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 357 ccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagattt 416
           |||||||||||||||||||| ||||| ||||| |||||||| ||||  || || || |||
Sbjct: 407 ccacctggtgaccccagcaaacgtgcatttgcttactttgttttgacaggaggcaggttt 466

                                                                       
Query: 417 gtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagt 476
           || |||||||| ||| | ||  | ||  | || |||||||| ||||| ||||| || |||
Sbjct: 467 gtctatgcctcattggttcgcctcctgattcttaagtttgttctgagcatgtctgccagt 526

                                                                       
Query: 477 aaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacc 536
           || ||||| ||||| |||||||| |||||||| || || || || ||||| || || || 
Sbjct: 527 aaagatgtccttgcacttgcttctcttgaggtggatctttccagcattgaacctgggaca 586

                               
Query: 537 actgtgactgtaaagtggcg 556
           ||||| ||||| ||||||||
Sbjct: 587 actgttactgtcaagtggcg 606
to top
>gb|M77225.1|TOBRFESP Nicotiana tabacum mitochondrial Rieske Fe-S protein mRNA, complete
           cds
          Length = 956

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 158/197 (80%)
 Strand = Plus / Plus

                                                                       
Query: 360 cctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagatttgtg 419
           |||||||| || ||||| ||||| |||||||||||||| ||||  || || || ||||| 
Sbjct: 265 cctggtgatccaagcaaacgtgcatttgcctactttgtcttgacaggaggcaggtttgtc 324

                                                                       
Query: 420 tatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagtaag 479
           || ||||| ||| ||||| | ||  | || ||||||||  |||| ||||| || ||||||
Sbjct: 325 tacgcctcattgatgcgtctcctgattcttaagtttgttttgagcatgtctgccagtaag 384

                                                                       
Query: 480 gatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtaccact 539
           ||||| ||||| |||||||| ||||| || || || || || ||||| || ||||| |||
Sbjct: 385 gatgttcttgcccttgcttcacttgaagtggatctttccagcattgaacctggtacaact 444

                            
Query: 540 gtgactgtaaagtggcg 556
           || ||||| ||||||||
Sbjct: 445 gttactgtgaagtggcg 461
to top
>gb|L16813.1|TOBFESD Nicotiana tabacum clone 32.10 Rieske iron-sulfur protein mRNA,
           complete cds; mitochondrial
          Length = 1121

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 159/200 (79%)
 Strand = Plus / Plus

                                                                       
Query: 357 ccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagattt 416
           |||||||||||||| ||||| ||||| ||||| |||||||| ||||  || || || |||
Sbjct: 391 ccacctggtgacccgagcaaacgtgcatttgcttactttgtcttgacaggaggcaggttt 450

                                                                       
Query: 417 gtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagt 476
           || |||||||| ||| | ||  | ||  | || |||||||| ||||| ||||| || |||
Sbjct: 451 gtttatgcctcattggttcgcctcctgattcttaagtttgttctgagcatgtctgccagt 510

                                                                       
Query: 477 aaggatgtgcttgcgcttgcttcccttgaggttgacctgtcaagtattgagcccggtacc 536
           || ||||| ||||| ||||| || |||||||| || || || || ||||| || || || 
Sbjct: 511 aaagatgtccttgcacttgcgtctcttgaggtggatctttccagcattgaacctgggacg 570

                               
Query: 537 actgtgactgtaaagtggcg 556
           ||||| ||||| ||||||||
Sbjct: 571 actgtcactgtcaagtggcg 590
to top
>ref|NM_121346.2| Arabidopsis thaliana oxidoreductase/ ubiquinol-cytochrome-c
           reductase AT5G13430 mRNA, complete cds
          Length = 1222

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 415 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 474

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 475 tttgtttatgcctc 488



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 521 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 575
to top
>emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, BAC clone T22N19 (ESSA project)
          Length = 68948

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                         
Query: 354   tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
             ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 49096 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 49037

                           
Query: 414   tttgtgtatgcctc 427
             ||||| ||||||||
Sbjct: 49036 tttgtttatgcctc 49023



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Minus

                                                                         
Query: 324   attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
             |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 52143 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 52084

                                                                         
Query: 384   tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
             || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 52083 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 52024

                                                                         
Query: 444   gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
             || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 52023 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 51964

                        
Query: 504   gaggttgacct 514
             |||||||||||
Sbjct: 51963 gaggttgacct 51953



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 460   tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
             |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 48990 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 48936
to top
>gb|AF375413.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, complete cds
          Length = 1067

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 381 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 440

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 441 tttgtttatgcctc 454



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 487 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 541
to top
>gb|AY066055.1| Arabidopsis thaliana AT5g13430/T22N19_80 mRNA, complete cds
          Length = 819

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 301 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 360

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 361 tttgtttatgcctc 374



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 407 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 461
to top
>emb|BX830387.1|CNS0A1JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1011

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 333 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 392

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 393 tttgtttatgcctc 406



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 439 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 493
to top
>emb|BX829878.1|CNS0A1B9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB42ZG11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1031

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 370 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 429

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 430 tttgtttatgcctc 443



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 476 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 530
to top
>emb|BX829847.1|CNS0A1CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZE04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1039

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 371 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 430

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 431 tttgtttatgcctc 444



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 477 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 531
to top
>emb|BX833733.1|CNS0A0BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 992

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 371 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 430

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 431 tttgtttatgcctc 444



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 477 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 531
to top
>gb|AY085370.1| Arabidopsis thaliana clone 1482 mRNA, complete sequence
          Length = 1068

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 406 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 465

                         
Query: 414 tttgtgtatgcctc 427
           ||||| ||||||||
Sbjct: 466 tttgtttatgcctc 479



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 460 tgagtatgtcagcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 512 tgagcatgtctgcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 566
to top
>ref|NM_121347.3| Arabidopsis thaliana oxidoreductase/ ubiquinol-cytochrome-c
           reductase AT5G13440 mRNA, complete cds
          Length = 1286

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 436 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 495

                                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
           || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 496 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 555

                                                                       
Query: 444 gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
           || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 556 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 615

                      
Query: 504 gaggttgacct 514
           |||||||||||
Sbjct: 616 gaggttgacct 626
to top
>gb|AY081510.1| Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein
           (At5g13440) mRNA, complete cds
          Length = 932

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 277 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 336

                                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
           || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 337 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 396

                                                                       
Query: 444 gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
           || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 397 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 456

                      
Query: 504 gaggttgacct 514
           |||||||||||
Sbjct: 457 gaggttgacct 467
to top
>gb|AF370533.1|AF370533 Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein
           (T22N19_90) mRNA, complete cds
          Length = 1080

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 333 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 392

                                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
           || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 393 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 452

                                                                       
Query: 444 gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
           || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 453 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 512

                      
Query: 504 gaggttgacct 514
           |||||||||||
Sbjct: 513 gaggttgacct 523
to top
>emb|BX829960.1|CNS0A1KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZG05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1003

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 292 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 351

                                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
           || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 352 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 411

                                                                       
Query: 444 gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
           || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 412 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 471

                      
Query: 504 gaggttgacct 514
           |||||||||||
Sbjct: 472 gaggttgacct 482
to top
>emb|BX829679.1|CNS0A1GR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB29ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1095

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| ||||||||||| || ||||| ||||| |||   |||||||| 
Sbjct: 371 tacccacctggtgaccctagcaagcgtgcattcgcctattttgtcttgtcgggtgggagg 430

                      
Query: 414 tttgtgtatgc 424
           ||||| |||||
Sbjct: 431 tttgtttatgc 441



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 471 gcaagtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           |||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 488 gcaagtaaagatgtccttgcccttgcatcccttgaggttgacct 531
to top
>gb|AY086148.1| Arabidopsis thaliana clone 21819 mRNA, complete sequence
          Length = 1226

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 151/191 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 437 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 496

                                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctcgttgttgcgtttgctc 443
           || ||||| ||||| |||   ||||| || ||||| ||||||||  |  | ||  |||| 
Sbjct: 497 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctctgttctccgcctgctt 556

                                                                       
Query: 444 gtcctaaagtttgtcctgagtatgtcagcaagtaaggatgtgcttgcgcttgcttccctt 503
           || || ||| || |  |||| ||||| |||||||| ||||| ||||| ||||| ||||| 
Sbjct: 557 gttctgaagcttattgtgagcatgtctgcaagtaaagatgtccttgcccttgcatccctc 616

                      
Query: 504 gaggttgacct 514
           |||||||||||
Sbjct: 617 gaggttgacct 627
to top
>dbj|AK221169.1| Arabidopsis thaliana mRNA for ubiquinol--cytochrome-c reductase
           -like protein, partial cds, clone: RAFL22-96-P11
          Length = 800

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 354 tacccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggaga 413
           ||||||||||||||||| |||||||| || || ||||| ||||| |||   ||||| || 
Sbjct: 25  tacccacctggtgaccctagcaagcgggcattcgcctattttgtcttgtcgggtggaagg 84

                                                                       
Query: 414 tttgtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagca 473
           ||||| ||||||||  |  | ||  |||| || || ||| || |  |||| ||||| |||
Sbjct: 85  tttgtttatgcctctgttctccgcctgcttgttctgaagcttattgtgagcatgtctgca 144

                                                    
Query: 474 agtaaggatgtgcttgcgcttgcttcccttgaggttgacct 514
           ||||| ||||| ||||| ||||| ||||| |||||||||||
Sbjct: 145 agtaaagatgtccttgcccttgcatccctcgaggttgacct 185
to top
>gb|DQ207870.1| Solanum tuberosum clone 087E11 rieske iron-sulfur protein-like
           mRNA, complete cds
          Length = 1098

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                       
Query: 357 ccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagattt 416
           ||||||||||| || ||||| ||||| ||||| |||||||| ||||  || || || || 
Sbjct: 341 ccacctggtgatcctagcaaacgtgcttttgcttactttgtcttgacaggaggcaggttc 400

                                                                       
Query: 417 gtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagt 476
           || |||||||| ||| | ||  | ||  | || |||||||| ||||| ||||| || |||
Sbjct: 401 gtctatgcctcattgcttcgcctcctgattctcaagtttgttctgagcatgtctgctagt 460

                                           
Query: 477 aaggatgtgcttgcgcttgcttcccttgaggt 508
           || ||||| ||||| |||||||| ||||||||
Sbjct: 461 aaagatgtccttgcacttgcttctcttgaggt 492
to top
>gb|BT014059.1| Lycopersicon esculentum clone 133157F, mRNA sequence
          Length = 1087

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                       
Query: 357 ccacctggtgaccccagcaagcgtgcctttgcctactttgtgttgagcggtgggagattt 416
           ||||||||||| || ||||| ||||| ||||| |||||||| ||||  || || || || 
Sbjct: 353 ccacctggtgatccaagcaaacgtgcttttgcttactttgtcttgacaggaggtaggttc 412

                                                                       
Query: 417 gtgtatgcctcgttgttgcgtttgctcgtcctaaagtttgtcctgagtatgtcagcaagt 476
           || |||||||| ||| | ||  | ||  | || |||||||| ||||| ||||| || |||
Sbjct: 413 gtctatgcctcattgcttcgcctcctgattctcaagtttgttctgagcatgtctgctagt 472

                                           
Query: 477 aaggatgtgcttgcgcttgcttcccttgaggt 508
           || ||||| ||||| |||||||| ||||||||
Sbjct: 473 aaagatgtccttgcacttgcttctcttgaggt 504
to top
>emb|BX830982.1|CNS0A0P7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS45ZG07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1231

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 324 attgtctacgacgagtataaccacaagaggtacccacctggtgaccccagcaagcgtgcc 383
           |||||||| |||||  |||||||  || | ||||||||||||||||| |||||||| || 
Sbjct: 381 attgtctatgacgaccataaccatgagcgttacccacctggtgaccctagcaagcgggca 440

                                                       
Query: 384 tttgcctactttgtgttgagcggtgggagatttgtgtatgcctc 427
           || ||||| ||||| |||   ||||| || ||||| ||||||||
Sbjct: 441 ttcgcctattttgtcttgtcgggtggaaggtttgtttatgcctc 484
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 110    cgccgcggccgcctccgccggcaggac 136
              |||||||||| ||||||||||||||||
Sbjct: 564906 cgccgcggccccctccgccggcaggac 564880
to top
>gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome 18, complete sequence
          Length = 193523

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 108   cccgccgcggccgcctccgccg 129
             ||||||||||||||||||||||
Sbjct: 25904 cccgccgcggccgcctccgccg 25925
to top
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419H03
          Length = 129020

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 109   ccgccgcggccgcctccgccgg 130
             ||||||||||||||||||||||
Sbjct: 92849 ccgccgcggccgcctccgccgg 92828
to top
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1103G11
          Length = 182931

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 109   ccgccgcggccgcctccgccgg 130
             ||||||||||||||||||||||
Sbjct: 36882 ccgccgcggccgcctccgccgg 36861
to top
>gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, complete sequence
          Length = 198440

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   cccgccgcggccgcctccgccg 129
             ||||||||||||||||||||||
Sbjct: 35259 cccgccgcggccgcctccgccg 35238
to top
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
            cluster, complete sequence
          Length = 84868

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  cccgccgcggccgcctccgcc 128
            |||||||||||||||||||||
Sbjct: 7768 cccgccgcggccgcctccgcc 7748
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 20       agcgaacgagcgaggcgaagcggcg 44
                |||||||||||| ||||||||||||
Sbjct: 20308794 agcgaacgagcgtggcgaagcggcg 20308770
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 88       cctcccacctcgcatggcgcc 108
                |||||||||||||||||||||
Sbjct: 10447461 cctcccacctcgcatggcgcc 10447481



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     ccgccgcggccgcctccgcc 128
               ||||||||||||||||||||
Sbjct: 3504990 ccgccgcggccgcctccgcc 3504971
to top
>gb|AF532115.1| Mus musculus strain 129/SvJ BAC clone citb553n23 from the MHC region,
              complete sequence
          Length = 161729

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    caactgcggctgctctgaaga 309
              |||||||||||||||||||||
Sbjct: 124166 caactgcggctgctctgaaga 124186
to top
>gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 from the MHC region,
             complete sequence
          Length = 172199

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   caactgcggctgctctgaaga 309
             |||||||||||||||||||||
Sbjct: 51474 caactgcggctgctctgaaga 51494
to top
>dbj|AB088974.1| Uncultured Eubacteriaceae bacterium gene for 16S rRNA, partial
            sequence, clone:Rs-K41
          Length = 1301

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   agcgaggcgaagcggcgacgc 48
            |||||||||||||||||||||
Sbjct: 1165 agcgaggcgaagcggcgacgc 1185
to top
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 20    agcgaacgagcgaggcgaagcggcg 44
             |||||||||||| ||||||||||||
Sbjct: 87921 agcgaacgagcgtggcgaagcggcg 87897
to top
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091D16
          Length = 174222

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     cctcccacctcgcatggcgcc 108
              |||||||||||||||||||||
Sbjct: 148419 cctcccacctcgcatggcgcc 148439
to top
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0053M06
          Length = 175416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    cctcccacctcgcatggcgcc 108
             |||||||||||||||||||||
Sbjct: 70052 cctcccacctcgcatggcgcc 70072
to top
>gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 from the MHC region, complete
             sequence
          Length = 158414

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   caactgcggctgctctgaaga 309
             |||||||||||||||||||||
Sbjct: 51456 caactgcggctgctctgaaga 51476
to top
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene,
            ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9,
            ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17,
            ORF18 and ORF19
          Length = 86080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  cccgccgcggccgcctccgcc 128
            |||||||||||||||||||||
Sbjct: 7686 cccgccgcggccgcctccgcc 7666
to top
>emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chromosome 17, complete
              sequence
          Length = 202624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    caactgcggctgctctgaaga 309
              |||||||||||||||||||||
Sbjct: 134101 caactgcggctgctctgaaga 134081
to top
>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete sequence
          Length = 193418

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 444    gtcctaaagtttgtcctgagtatg 467
              |||||||||||| |||||||||||
Sbjct: 134992 gtcctaaagtttctcctgagtatg 134969
to top
>ref|XM_480201.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 ccgccgcggccgcctccgcc 128
           ||||||||||||||||||||
Sbjct: 674 ccgccgcggccgcctccgcc 693
to top
>ref|XM_517309.1| PREDICTED: Pan troglodytes similar to KIAA1458 protein (LOC461342),
           mRNA
          Length = 1325

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 gccccgccgcggccgcctccgccg 129
           |||||||||| |||||||||||||
Sbjct: 280 gccccgccgccgccgcctccgccg 257
to top
>ref|NM_194142.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 681

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 104 gcgccccgccgcggccgcctccgccggcagga 135
           ||||| |||||| |||||| ||||||||||||
Sbjct: 270 gcgccacgccgccgccgccgccgccggcagga 301
to top
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ccgccgcggccgcctccgcc 128
              ||||||||||||||||||||
Sbjct: 192561 ccgccgcggccgcctccgcc 192542
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     gcttttcggctgaatctctt 248
               ||||||||||||||||||||
Sbjct: 2998943 gcttttcggctgaatctctt 2998962
to top
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ccgccgcggccgcctccgcc 128
             ||||||||||||||||||||
Sbjct: 31916 ccgccgcggccgcctccgcc 31897
to top
>ref|XM_854345.1| PREDICTED: Canis familiaris similar to SUMO1/sentrin/SMT3 specific
           protease 3, transcript variant 3 (LOC607655), mRNA
          Length = 2017

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 cgccccgccgcggccgcctc 124
           ||||||||||||||||||||
Sbjct: 32  cgccccgccgcggccgcctc 13
to top
>ref|XM_844542.1| PREDICTED: Canis familiaris similar to SUMO1/sentrin/SMT3 specific
           protease 3, transcript variant 1 (LOC607655), mRNA
          Length = 2423

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 cgccccgccgcggccgcctc 124
           ||||||||||||||||||||
Sbjct: 79  cgccccgccgcggccgcctc 60
to top
>emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on chromosome 10 Contains the
             3' end of a 44kDA polymerase (RNA) III (DNA directed)
             polypeptide D (POLR3D) pseudogene, the 3' end of the ADK
             gene for adenosine kinase and a novel pseudogene, complete
             sequence
          Length = 165773

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   tttgcctactttgtgttgag 403
             ||||||||||||||||||||
Sbjct: 72343 tttgcctactttgtgttgag 72362
to top
>emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F19 on chromosome 20p12.3-13
            Contains the gene for a novel protein (KIAA1442), the
            RPL19P1 gene for ribosomal protein L19 pseudogene 1, the
            CPX-1 gene for metallocarboxypeptidase, the C20orf141
            gene, a novel gene and four CpG islands, complete
            sequence
          Length = 135005

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 105  cgccccgccgcggccgcctccgcc 128
            |||||||||||||||||| |||||
Sbjct: 8490 cgccccgccgcggccgccgccgcc 8467
to top
>emb|AJ720647.1| Gallus gallus mRNA for hypothetical protein, clone 22l4
          Length = 3399

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 98  cgcatggcgccccgccgcggccgc 121
           ||||||| ||||||||||||||||
Sbjct: 33  cgcatggggccccgccgcggccgc 10
to top
>ref|NM_001007851.1| Gallus gallus Ras association (RalGDS/AF-6) domain family 3
           (RASSF3), mRNA
          Length = 3399

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 98  cgcatggcgccccgccgcggccgc 121
           ||||||| ||||||||||||||||
Sbjct: 33  cgcatggggccccgccgcggccgc 10
to top
>ref|XM_938882.1| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1442), mRNA
          Length = 3007

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 105 cgccccgccgcggccgcctccgcc 128
           |||||||||||||||||| |||||
Sbjct: 235 cgccccgccgcggccgccgccgcc 212
to top
>ref|XM_044921.6| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1442), mRNA
          Length = 3007

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 105 cgccccgccgcggccgcctccgcc 128
           |||||||||||||||||| |||||
Sbjct: 235 cgccccgccgcggccgccgccgcc 212
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      ccgccgcggccgcctccgcc 128
                ||||||||||||||||||||
Sbjct: 18928545 ccgccgcggccgcctccgcc 18928526
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 104    gcgccccgccgcggccgcctccgccggcagga 135
              ||||| |||||| |||||| ||||||||||||
Sbjct: 848350 gcgccacgccgccgccgccgccgccggcagga 848381
to top
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498E12
          Length = 153523

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ccgccgcggccgcctccgcc 128
              ||||||||||||||||||||
Sbjct: 138409 ccgccgcggccgcctccgcc 138390
to top
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0672D01
          Length = 146954

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ccgccgcggccgcctccgcc 128
             ||||||||||||||||||||
Sbjct: 60707 ccgccgcggccgcctccgcc 60688
to top
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1138_B05
          Length = 113982

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 104   gcgccccgccgcggccgcctccgccggcagga 135
             ||||| |||||| |||||| ||||||||||||
Sbjct: 47106 gcgccacgccgccgccgccgccgccggcagga 47137
to top
>gb|AF140553.1|AF140553 Avena sativa DNA-binding protein WRKY3 (wrky3) mRNA, complete cds
          Length = 1206

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 gccccgccgcggccgcctcc 125
           ||||||||||||||||||||
Sbjct: 117 gccccgccgcggccgcctcc 98
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      ccgccgcggccgcctccgcc 128
                ||||||||||||||||||||
Sbjct: 19087367 ccgccgcggccgcctccgcc 19087348
to top
>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete
              sequence
          Length = 118199

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    cgccgcggccgcctccgccg 129
              ||||||||||||||||||||
Sbjct: 104550 cgccgcggccgcctccgccg 104531
to top
>emb|CT030702.11| Mouse DNA sequence from clone RP23-76I16 on chromosome 17, complete
             sequence
          Length = 222733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 444   gtcctaaagtttgtcctgagtatg 467
             |||||||||||| |||||||||||
Sbjct: 46778 gtcctaaagtttctcctgagtatg 46755
to top
>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete
             sequence
          Length = 175563

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   cgccgcggccgcctccgccg 129
             ||||||||||||||||||||
Sbjct: 42396 cgccgcggccgcctccgccg 42415
to top
>gb|M94265.1|CRESAGLE Chlamydomonas reinhardtii cell wall lytic enzyme mRNA, complete cds
          Length = 2389

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cccgccgcggccgcctccgc 127
           ||||||||||||||||||||
Sbjct: 862 cccgccgcggccgcctccgc 881
to top
>dbj|D10542.1|CREGLE C. reinhardtii mRNA for gamete lytic enzyme (GLE), complete cds
          Length = 2379

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cccgccgcggccgcctccgc 127
           ||||||||||||||||||||
Sbjct: 862 cccgccgcggccgcctccgc 881
to top
>dbj|AB058413.1| Chlamydomonas reinhardtii mmp1 mRNA for gametolysin, complete cds
          Length = 2452

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cccgccgcggccgcctccgc 127
           ||||||||||||||||||||
Sbjct: 895 cccgccgcggccgcctccgc 914
to top
>dbj|AB058411.1| Chlamydomonas reinhardtii mmp1 gene for gametolysin, complete cds
          Length = 6100

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  cccgccgcggccgcctccgc 127
            ||||||||||||||||||||
Sbjct: 2850 cccgccgcggccgcctccgc 2869


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,505,174
Number of Sequences: 3902068
Number of extensions: 3505174
Number of successful extensions: 82175
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81470
Number of HSP's gapped (non-prelim): 691
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top