ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16o07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4 297 2e-80
2R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2 295 7e-80
3R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1 295 1e-79
4R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3 294 2e-79
5RL13A_PICMA (O65055) 60S ribosomal protein L13a 292 7e-79
6RL13A_LUPLU (O49885) 60S ribosomal protein L13a 286 4e-77
7RL13A_CYAPA (P93099) 60S ribosomal protein L13a 218 1e-56
8RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A 204 2e-52
9RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a 203 4e-52
10RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a 202 6e-52
11RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a 202 6e-52
12RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b... 202 6e-52
13RL13A_RAT (P35427) 60S ribosomal protein L13a 202 1e-51
14RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation... 201 1e-51
15RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A 199 5e-51
16RL16A_SCHPO (O42848) 60S ribosomal protein L16-A 199 8e-51
17RL16_NEUCR (Q9P720) 60S ribosomal protein L16 198 1e-50
18RL16B_SCHPO (O42991) 60S ribosomal protein L16-B 197 2e-50
19RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation... 195 1e-49
20RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A 191 2e-48
21RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22) 189 5e-48
22RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23) 188 1e-47
23RL16C_SCHPO (O43004) 60S ribosomal protein L16-C 187 3e-47
24RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment) 184 2e-46
25RL13A_CAEEL (Q27389) 60S ribosomal protein L13a 181 2e-45
26RL13_ARCFU (O29137) 50S ribosomal protein L13P 88 2e-17
27RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50... 86 1e-16
28RL13_PYRAB (Q9V196) 50S ribosomal protein L13P 83 9e-16
29RL13_PYRHO (O59300) 50S ribosomal protein L13P 82 1e-15
30RL13_AERPE (Q9YB50) 50S ribosomal protein L13P 79 1e-14
31RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13) 73 7e-13
32RL13_SULSO (P95991) 50S ribosomal protein L13P 72 1e-12
33RL13_METJA (P54023) 50S ribosomal protein L13P 70 5e-12
34RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P 68 2e-11
35RL13_SULAC (P39473) 50S ribosomal protein L13P 67 4e-11
36RL13_THEMA (Q9X1G5) 50S ribosomal protein L13 47 5e-05
37RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precu... 46 1e-04
38RL13_STRCO (Q53874) 50S ribosomal protein L13 44 3e-04
39RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13 44 3e-04
40RL13_SYNY3 (P73294) 50S ribosomal protein L13 43 8e-04
41RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13 42 0.002
42RL13_MYCLE (P38014) 50S ribosomal protein L13 41 0.003
43RL13_BACSU (P70974) 50S ribosomal protein L13 40 0.005
44RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13 39 0.011
45RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial pre... 39 0.015
46RL13_AQUAE (O67722) 50S ribosomal protein L13 39 0.015
47RL13_STAEQ (Q5HM31) 50S ribosomal protein L13 39 0.015
48RL13_THET8 (P60488) 50S ribosomal protein L13 39 0.019
49RL13_CHLTR (O84127) 50S ribosomal protein L13 38 0.025
50RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13 38 0.033
51RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13) 37 0.056
52RL13_STAES (Q8CRI9) 50S ribosomal protein L13 37 0.056
53RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13 37 0.073
54RL13_HELPY (P56038) 50S ribosomal protein L13 37 0.073
55RL13_TREPA (O83988) 50S ribosomal protein L13 37 0.073
56RL13_STAAW (Q7A089) 50S ribosomal protein L13 36 0.095
57RL13_STAAS (Q6G7A3) 50S ribosomal protein L13 36 0.095
58RL13_STAAR (Q6GEL7) 50S ribosomal protein L13 36 0.095
59RL13_STAAN (Q7A473) 50S ribosomal protein L13 36 0.095
60RL13_STAAM (Q99S51) 50S ribosomal protein L13 36 0.095
61RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13 36 0.095
62RL13_STACA (Q00990) 50S ribosomal protein L13 36 0.12
63RL13_SHIFL (P0AA15) 50S ribosomal protein L13 36 0.12
64RL13_SALTY (P0AA13) 50S ribosomal protein L13 36 0.12
65RL13_SALTI (P0AA14) 50S ribosomal protein L13 36 0.12
66RL13_ECOLI (P0AA10) 50S ribosomal protein L13 36 0.12
67RL13_ECOL6 (P0AA11) 50S ribosomal protein L13 36 0.12
68RL13_ECO57 (P0AA12) 50S ribosomal protein L13 36 0.12
69RL13_HAEIN (P44387) 50S ribosomal protein L13 35 0.16
70RL13_STAHJ (Q4L881) 50S ribosomal protein L13 35 0.28
71IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Ir... 33 0.61
72IER5_MOUSE (O89113) Immediate early response gene 5 protein 32 1.4
73RL13_BUCBP (Q89AE6) 50S ribosomal protein L13 32 2.3
74IF2_METCA (Q609C0) Translation initiation factor IF-2 30 5.2
75ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII... 30 5.2
76APXL_HUMAN (Q13796) Apical-like protein (APXL protein) 30 6.8
77Y2023_MYCBO (P64918) Hypothetical protein Mb2023 30 6.8
78Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056 30 6.8
79WWTR1_MOUSE (Q9EPK5) WW domain-containing transcription regulato... 30 6.8
80RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13 30 6.8
81PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1... 30 8.9 
>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  297 bits (760), Expect = 2e-80
 Identities = 144/202 (71%), Positives = 163/202 (80%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKY+RFLRK
Sbjct: 6   GICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK YEGVP PYD+ KRMVI
Sbjct: 66  RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVI 125

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQ GH+YCLLG+LS EVGWN+ DTI                ++K   +    
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRV- 184

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +  +   EKLG QL+ILAP+KY
Sbjct: 185 KAEKVAEEKLGAQLDILAPVKY 206
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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  295 bits (756), Expect = 7e-80
 Identities = 144/202 (71%), Positives = 164/202 (81%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+RFLRK
Sbjct: 6   GICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EGVPPPYD+ KRMVI
Sbjct: 66  RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 125

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQ GH+YCLLG+LS EVGWN+ DTI                ++K   +  A 
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLTKLRA- 184

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +  +   EKLG+QL++LA IKY
Sbjct: 185 KAEKVAEEKLGSQLDVLASIKY 206
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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  295 bits (754), Expect = 1e-79
 Identities = 141/202 (69%), Positives = 164/202 (81%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKY+RFLRK
Sbjct: 6   GICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG  ALARLK +EGVP PYD+ KRMV+
Sbjct: 66  RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVV 125

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQ GH+YCLLG+LS EVGWN+ DTI                ++K   +  A 
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRA- 184

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +  +   EKLG+QL++LAP+KY
Sbjct: 185 KAEKVAEEKLGSQLDVLAPVKY 206
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>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  294 bits (752), Expect = 2e-79
 Identities = 141/202 (69%), Positives = 163/202 (80%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+CAKRVVVD RHHMLGRLAS  AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+RFLRK
Sbjct: 6   GICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EG+PPPYD+ KRMVI
Sbjct: 66  RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVI 125

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQ GH+YCLLG+LS EVGWN+ DTI                ++K   +   +
Sbjct: 126 PDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKL-RT 184

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +  +   E+LG+QL++LAP+KY
Sbjct: 185 KAEKVAEERLGSQLDVLAPVKY 206
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>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  292 bits (747), Expect = 7e-79
 Identities = 144/202 (71%), Positives = 164/202 (81%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQKMKYLRFLRK
Sbjct: 6   GICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT RG AALA L+A+EGVPPPYDR KRMVI
Sbjct: 66  RMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRKKRMVI 125

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQPGH+YCLLG+LSKEVGW++ DTI                + K   +   S
Sbjct: 126 PDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKRKAKAQVSYERRKQLAKL-RS 184

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +      ++L  ++E+LA +KY
Sbjct: 185 KAVELAEKQLAPEMELLASLKY 206
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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  286 bits (732), Expect = 4e-77
 Identities = 142/202 (70%), Positives = 163/202 (80%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQKMKYLRFLRK
Sbjct: 6   GIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYLRFLRK 65

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           RMNTKPSHGPIH  AP+KI WRT+RGMIPHKT RGE ALARLK YEG+PPP+D+ KR+V+
Sbjct: 66  RMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQKRLVV 124

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           PDALKVLRLQ GH+YCLLGQLS EVGWNY DTI                ++K   +    
Sbjct: 125 PDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLNKLRV- 183

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           +  +  +EKLG+QL+ILAP+KY
Sbjct: 184 KAEQVAQEKLGSQLDILAPVKY 205
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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  218 bits (555), Expect = 1e-56
 Identities = 103/149 (69%), Positives = 124/149 (83%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 204
           K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R K+K+  FL+KRMNT
Sbjct: 4   KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63

Query: 205 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 384
            P  GP HFR+PA+ILWRTIRGMIPHKT RG AAL RLKA+EGVPPPYD+ KRMVIP AL
Sbjct: 64  NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123

Query: 385 KVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           +VLRL+PG ++C+LG+L+ EVGW ++D +
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHSDLV 152
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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score =  204 bits (519), Expect = 2e-52
 Identities = 90/153 (58%), Positives = 119/153 (77%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG   R K+K++ FLRK
Sbjct: 3   GFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRK 62

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           R N  P+ GP HFRAP+KILW+T+RGMIPHKT RG++AL RL+AY+G PPPYD  +R+V+
Sbjct: 63  RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVVV 122

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           P AL+V  L+PG +YC +G+LS EVGW Y D +
Sbjct: 123 PAALRVFCLKPGRKYCHVGRLSHEVGWKYRDVV 155
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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score =  203 bits (516), Expect = 4e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (515), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (515), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score =  202 bits (515), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (513), Expect = 1e-51
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score =  201 bits (512), Expect = 1e-51
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNY 459
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148
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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score =  199 bits (507), Expect = 5e-51
 Identities = 87/153 (56%), Positives = 118/153 (77%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG   R K+K++ FLRK
Sbjct: 3   GFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLRK 62

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           R N  P+ GP HFRAP+KILW+T+RGMIPHKT RG+ AL RL++Y+G PPPYD  +R+V+
Sbjct: 63  RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVVV 122

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           P AL+V  L+PG +YC +G+LS EVGW Y + +
Sbjct: 123 PAALRVFCLKPGRKYCHVGRLSHEVGWKYREVV 155
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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score =  199 bits (505), Expect = 8e-51
 Identities = 90/149 (60%), Positives = 119/149 (79%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 204
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 205 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 384
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125

Query: 385 KVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           +VLRL+PG +YC +G+LS EVGW Y+D +
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKYSDIV 154
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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score =  198 bits (504), Expect = 1e-50
 Identities = 97/191 (50%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG   R K+KY  +LRK     P
Sbjct: 8   VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67

Query: 211 SHG-PIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 387
           + G P HFRAP++I ++ +RGMIPHKTARG AAL RLK +EGVPPPYD+ K+MV+P AL+
Sbjct: 68  TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALR 127

Query: 388 VLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEK-AAGEASASRPRR 564
           VLRLQPG ++C +G+LS EVGW Y D +                ++K AA + S ++   
Sbjct: 128 VLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKAKGAAYYERKKVAARQLSEAKKSA 187

Query: 565 QPREKLGTQLE 597
           +  +K    L+
Sbjct: 188 KVNDKTAEALK 198
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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score =  197 bits (502), Expect = 2e-50
 Identities = 90/149 (60%), Positives = 118/149 (79%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 204
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 205 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 384
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125

Query: 385 KVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           +VLRL+PG +YC +G+LS EVGW Y D +
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKYNDIV 154
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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score =  195 bits (495), Expect = 1e-49
 Identities = 89/135 (65%), Positives = 111/135 (82%)
 Frame = +1

Query: 55  MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 234
           +LGRLA+IVA E+L G +VVVVRCE I +SG   R K+KYL FLRKRMNT PS GP HFR
Sbjct: 1   LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60

Query: 235 APAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHR 414
           AP++I WRT+RGM+PHKT RG+AAL RLK ++GVPPPYD+ KRMV+P ALK++RL+P  +
Sbjct: 61  APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALKIVRLKPTRK 120

Query: 415 YCLLGQLSKEVGWNY 459
           + LLG+L+ EVGW Y
Sbjct: 121 FALLGRLAHEVGWKY 135
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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score =  191 bits (484), Expect = 2e-48
 Identities = 85/153 (55%), Positives = 118/153 (77%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+  + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG   R K+K+L +LRK
Sbjct: 3   GLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRK 62

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           R N  P+ GP HFRAP++I ++ +RGMIPHKT RG+AALARL+ ++G+P PYD+ +R+V+
Sbjct: 63  RCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVV 122

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           P A++VL L+   +YC +G+LS EVGW+Y D I
Sbjct: 123 PIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVI 155
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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score =  189 bits (481), Expect = 5e-48
 Identities = 91/191 (47%), Positives = 125/191 (65%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG   R K+KY  FLRK      
Sbjct: 6   VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           + GP HFRAP++I ++ +RGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+V
Sbjct: 66  TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRV 125

Query: 391 LRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASASRPRRQP 570
           LRL+PG +Y  LG+LS  VGW Y D +                +++A  +  AS      
Sbjct: 126 LRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEAKRKVSSAEYYAKKRAFTKKVASANATAA 185

Query: 571 REKLGTQLEIL 603
              +  QL  L
Sbjct: 186 ESDVAKQLAAL 196
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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score =  188 bits (477), Expect = 1e-47
 Identities = 86/147 (58%), Positives = 114/147 (77%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG   R K+KY  FLRK      
Sbjct: 5   VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           + GP HFRAP++IL++ IRGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+V
Sbjct: 65  TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRV 124

Query: 391 LRLQPGHRYCLLGQLSKEVGWNYADTI 471
           LRL+PG +Y  LG+LS  VGW Y D +
Sbjct: 125 LRLKPGRKYTTLGKLSTSVGWKYEDVV 151
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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score =  187 bits (475), Expect = 3e-47
 Identities = 84/149 (56%), Positives = 113/149 (75%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 204
           K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 205 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 384
            PS G  HFRAP++I  + +RGM+PHKT RG  AL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAAL 125

Query: 385 KVLRLQPGHRYCLLGQLSKEVGWNYADTI 471
           +VLRL+P  +YC +G+LS EVGW Y + +
Sbjct: 126 RVLRLKPSRKYCTIGRLSSEVGWKYKNIV 154
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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score =  184 bits (468), Expect = 2e-46
 Identities = 86/135 (63%), Positives = 111/135 (82%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 3   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 63  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 122

Query: 391 LRLQPGHRYCLLGQL 435
           +RL+   ++  LG+L
Sbjct: 123 VRLKLTGKFXYLGRL 137
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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score =  181 bits (458), Expect = 2e-45
 Identities = 88/202 (43%), Positives = 126/202 (62%)
 Frame = +1

Query: 13  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 192
           G+  + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG   R K+KY+ FLRK
Sbjct: 2   GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61

Query: 193 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 372
           R N  P+ G  H+RAP KI WRT+RGM+PHKT RG  AL  L+AYEGVP  Y +TK +  
Sbjct: 62  RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121

Query: 373 PDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIXXXXXXXXXXXXXXXXQEKAAGEASAS 552
           P A +  RLQP  ++C++G+LS EVGW + D +                Q+K   +  A 
Sbjct: 122 PSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKM-DKLAV 179

Query: 553 RPRRQPREKLGTQLEILAPIKY 618
           + ++    K+    +I+  + Y
Sbjct: 180 QAKKNAAPKIAQYQKIIEALGY 201
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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 213
           V+DA  H+LGRL+S +AK LLNG+R+VVV  E+  ++G    + M + R+  K       
Sbjct: 18  VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74

Query: 214 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 393
            GP   R P +I  RT+RGM+P K++RG  A  RL+ + GVP      +   I DAL + 
Sbjct: 75  KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGREFEKIEDAL-LE 133

Query: 394 RLQPGHRYCLLGQLSKEVGW 453
           ++    +Y  L ++S+ +G+
Sbjct: 134 KVSKTDKYVTLAEVSRYLGF 153
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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           ++++   H+LGRLAS+V+K+LL G+ V+V+  E+I ++G       KY + + +   + P
Sbjct: 4   MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63

Query: 211 SH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 387
              GP + R P  I  RT+RGM+P+K ++G  A   LKAY G+P  +   + + IPDA K
Sbjct: 64  RRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA-K 122

Query: 388 VLRLQPGHRYCLLGQLSKEVG 450
              ++ G     LG++S+ +G
Sbjct: 123 AGSIKKGME---LGEISELLG 140
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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 53/142 (37%), Positives = 79/142 (55%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 213
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 214 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 393
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +   +   I +A  V 
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEA-HVS 121

Query: 394 RLQPGHRYCLLGQLSKEVGWNY 459
           RL    +Y  +G+++K +G  +
Sbjct: 122 RLS-RPKYVTVGEVAKFLGGKF 142
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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 53/142 (37%), Positives = 79/142 (55%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 213
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 214 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 393
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +   +   I +A  V 
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEA-HVS 121

Query: 394 RLQPGHRYCLLGQLSKEVGWNY 459
           RL    +Y  +G+++K +G  +
Sbjct: 122 RLS-RPKYVTVGEVAKFLGGKF 142
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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
 Frame = +1

Query: 22  AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMN 201
           A+ +VVD    ++GRLAS+VAK LL G RV VV  E+I +SG   R  ++  R     + 
Sbjct: 8   AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD-PRMVVESYRTTVLGVK 66

Query: 202 TKPSH--GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 375
           +  SH   P   R P ++    +RGM+P   ARG  ALARL+ Y GVP      + +  P
Sbjct: 67  SHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFP 126

Query: 376 DALKVLRLQPGHRYCLLGQLSKEVGW 453
           +A    RL     Y  LG +++++GW
Sbjct: 127 EA-DASRL--SSHYIELGAVARQLGW 149
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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 50/142 (35%), Positives = 78/142 (54%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           V+VDAR  ++GR+AS VA++ L+G+ V VV  E   ++G   +   KY     KR++   
Sbjct: 10  VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKY----EKRVDIGN 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
            +G  + + P  I  RTIRGM+PHK  RG  A   ++ Y G   PYD    ++  D   +
Sbjct: 66  DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVL--DGTSL 121

Query: 391 LRLQPGHRYCLLGQLSKEVGWN 456
            RL    ++  LG++S+ +G N
Sbjct: 122 DRLS-NIKFVTLGEISETLGAN 142
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>RL13_SULSO (P95991) 50S ribosomal protein L13P|
          Length = 149

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           V+++A   +LGR+AS V + L  G++V++V  E+  +SG   R    Y   L  +    P
Sbjct: 10  VIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNP 69

Query: 211 SHGPIHF-RAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 387
               I   R+P  I+ RTIRGM+P K+++G   L  +K Y GVP  ++  + +  PD+  
Sbjct: 70  YRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS-D 127

Query: 388 VLRLQPGHRYCLLGQLSKEVGWN 456
           V RL+   +Y  +  +SKE+GW+
Sbjct: 128 VSRLK--GKYVTVEVVSKELGWS 148
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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 213
           V+DA   +LGRLAS VAK +L G+ +V+V  E + ++G        Y     K+    P 
Sbjct: 3   VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITGNKDWIIKTYQEEREKKNVANPR 62

Query: 214 H-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
             GP   R P  IL RTIR M+P+K  +G  A  R+K Y G P      K + + +  K+
Sbjct: 63  RFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP------KNLTVDE--KI 114

Query: 391 LRLQPGHRYCLLGQLSKEVG 450
                  +Y  L +LSK +G
Sbjct: 115 SHKLNTTKYITLAELSKHLG 134
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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/142 (35%), Positives = 71/142 (50%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 210
           VVVDAR  ++GR+AS VA+  L G RV VV  E+  ++G     +       R R N   
Sbjct: 10  VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65

Query: 211 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 390
             GP + + P  I  R IRGM+P+K   G  AL  ++ Y G P   D      + D   +
Sbjct: 66  DRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDEDGD----VLDGTSL 121

Query: 391 LRLQPGHRYCLLGQLSKEVGWN 456
            RL    R+  L ++S+E+G N
Sbjct: 122 DRLST-IRFVTLSEVSEELGAN 142
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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKY-LRFLRKRMNTK 207
           V+VDA + +LGR+++ +AK L +G++V VV  E+  +SG   R    Y L F  K M   
Sbjct: 8   VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67

Query: 208 PSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 387
              G    R P  I+ RT+RGM+P K   G+     LKAY G+P   +  K M+  D   
Sbjct: 68  YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELE-GKSMIRFDDAD 125

Query: 388 VLRLQPGHRYCLLGQLSKEVG 450
           V RL+   +Y  + +LS+ +G
Sbjct: 126 VSRLK--GKYITVAELSRLLG 144
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>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13|
          Length = 149

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  VVDA   +LGRLA+ +AK L+             G  V+VV  +++ ++G  + QK+
Sbjct: 21  KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKV 80

Query: 169 KY--------LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKA 324
            Y        L+ L  R   +        + P +++W  ++ M+P K  +G   L RLK 
Sbjct: 81  YYWHSGYPGGLKSLTARQMLE--------KHPERLIWLAVKRMLP-KNRKGRKMLKRLKV 131

Query: 325 YEGVPPPYDRTK 360
           Y     P+   K
Sbjct: 132 YASPEHPHQAQK 143
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>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)|
          Length = 250

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQKM 168
           K  VVDA   +LGR+AS +A     K L +       G  V+VV  +++ +SG    QK+
Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
                 R     + +   +  R P +I+   +RGM+P K   G      LK Y+G   P+
Sbjct: 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP-KGRLGRYLFNHLKVYKGAEHPH 231

Query: 349 DRTKRMVIPDALKVLRLQ 402
              + + +P   K +R++
Sbjct: 232 QAQQPIDLPLRDKRIRVE 249
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>RL13_STRCO (Q53874) 50S ribosomal protein L13|
          Length = 147

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 177
           V+DA+  +LGRLA+            I A  +  G  V+++  +++ +SG    QKM Y 
Sbjct: 17  VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAYR 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
                       +  +  + P K + + I+GM+P K + G   L++LK Y+G   P+
Sbjct: 77  HSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLP-KNSLGRQMLSKLKVYKGDQHPH 132
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>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13|
          Length = 174

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQKMKY 174
           VVVDA    LGRLA+++A              ++ G  VVV+   ++ ++G  +  K+ Y
Sbjct: 42  VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100

Query: 175 LRF--LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            R+   +  + T+ +   +  + P +++   + GM+P K  +G A   RLK Y G   P+
Sbjct: 101 TRYTGYQGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHPH 158

Query: 349 DRTKRMVI 372
              K  V+
Sbjct: 159 SAQKPQVL 166
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>RL13_SYNY3 (P73294) 50S ribosomal protein L13|
          Length = 151

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRLA+ VA  L              G  V+++  E+I ++G    QK+
Sbjct: 15  KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKL 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
                 R     + +   +  R P +I+   +RGM+P K + G     +LK Y G   P+
Sbjct: 75  YRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLP-KNSLGRKLFTKLKVYAGPSHPH 133
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>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13|
          Length = 145

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G   R KM
Sbjct: 15  KWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHFTGNKERDKM 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            S G +    P ++L  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSISAGELKANNPERLLENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_MYCLE (P38014) 50S ribosomal protein L13|
          Length = 147

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           V+DA   +LGRLA++ A  L              G  V+V+  +++ +SG  V+ KM Y 
Sbjct: 17  VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYR 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 357
                    K + G +  + P +++ + I GM+P K         +L+ Y G  P +  +
Sbjct: 77  HSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLP-KNKLSRQIQRKLRVYAG--PDHPHS 133

Query: 358 KRMVIPDALK 387
            +  +P  +K
Sbjct: 134 AQQPVPFEIK 143
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>RL13_BACSU (P70974) 50S ribosomal protein L13|
          Length = 145

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K +VVDA    LGRL+S VA  L              G  V+++  E+I ++G  +  K+
Sbjct: 15  KCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIELTGKKLTDKI 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRA--PAKILWRTIRGMIPHKTARGEAALARLKAYEGVPP 342
            Y R  +     K S   +  R   P K+L   I+GM+P K + G     +L  Y G   
Sbjct: 75  -YYRHTQHPGGLK-SRTALEMRTNYPEKMLELAIKGMLP-KGSLGRQMFKKLNVYRGSEH 131

Query: 343 PYDRTK 360
           P++  K
Sbjct: 132 PHEAQK 137
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>RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13|
          Length = 143

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM 168
           K  ++DA    LGRLAS  AK L+                +V++  ++I ++G     K 
Sbjct: 15  KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y    +    T  +   +  R P +IL + ++G++P K   G      LK Y G   P+
Sbjct: 75  YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHPH 133

Query: 349 D 351
           +
Sbjct: 134 E 134
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>RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial precursor (YmL23)|
          Length = 163

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
 Frame = +1

Query: 58  LGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLRFLRK-RM 198
           LGRLAS +A  L+             G  VVV  C++I ++G    QK  +    R  ++
Sbjct: 28  LGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQL 87

Query: 199 NTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT------K 360
             +  +  +  +   +IL + + GM+P    R +  L RLK ++G   PY +       +
Sbjct: 88  KLQTMNKVVADKGFGEILKKAVSGMLPKNKLR-KQRLDRLKVFDGSENPYKQNITAFAHE 146

Query: 361 RMVIPDALK 387
           +  IP+ LK
Sbjct: 147 QSSIPEPLK 155
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>RL13_AQUAE (O67722) 50S ribosomal protein L13|
          Length = 144

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLAS +AK L              G  V+V+  E+I ++G  + QK  Y 
Sbjct: 17  VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYW 76

Query: 178 ----------RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 327
                     R L+  +  KP           +++   ++ M+P K   G   L +LK Y
Sbjct: 77  HSRYPGGLKERTLKWMLENKPE----------EVIRLAVKRMLP-KNRLGHRMLKKLKVY 125

Query: 328 EGVPPPYDRTK 360
            G   P+   K
Sbjct: 126 RGPEHPHQAQK 136
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>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13|
          Length = 145

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+++   +I  +G   + KM
Sbjct: 15  KWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEFTGNKEQDKM 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            S G +    P ++L  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_THET8 (P60488) 50S ribosomal protein L13|
          Length = 140

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKY 174
           V++DA    LGRLA+ +A  L              G  VVVV  ++I ++G  + QK+ Y
Sbjct: 14  VLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKI-Y 72

Query: 175 LRF-----------LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 321
            R+           L K + T P           ++L   ++GM+P K   G     RLK
Sbjct: 73  TRYSGYPGGLKKIPLEKMLATHPE----------RVLEHAVKGMLP-KGPLGRRLFKRLK 121

Query: 322 AYEGVPPPYDRTKRMVIPDALKV 390
            Y G   P+   +    P+ L+V
Sbjct: 122 VYAGPDHPHQAQR----PEKLEV 140
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>RL13_CHLTR (O84127) 50S ribosomal protein L13|
          Length = 150

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 174
           VV+A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 175 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134
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>RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13|
          Length = 150

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 174
           V++A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VINAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 175 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVVKG 134
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>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)|
          Length = 154

 Score = 37.0 bits (84), Expect = 0.056
 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
 Frame = +1

Query: 16  VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 159
           V  K V++DA   ++GRLA++VA  L              G  V+++   ++ ++G    
Sbjct: 11  VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70

Query: 160 QKMKYLRF-LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGV 336
            K+ Y        +  + +   +  R P +++ + I  MIP +   G   +  L+ Y G 
Sbjct: 71  NKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIP-RGPLGRVQMGNLRVYPGA 129

Query: 337 PPPYD 351
             P++
Sbjct: 130 EHPHE 134
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>RL13_STAES (Q8CRI9) 50S ribosomal protein L13|
          Length = 145

 Score = 37.0 bits (84), Expect = 0.056
 Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+++   +I  +G   + KM
Sbjct: 15  KWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEFTGNKEQDKM 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            +            S G +    P ++L  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YHRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13|
          Length = 149

 Score = 36.6 bits (83), Expect = 0.073
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 174
           VVDA    LGRL+S VAK L              G  V+V+  E++ ++G    QK+ +Y
Sbjct: 23  VVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRLTGAKKGQKIYRY 82

Query: 175 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                  M   P    +  R P  I+   I+GM+P +T  G+  L  L+  +G
Sbjct: 83  YTGYISGMREIPFEN-MMARKPNYIIEHAIKGMMP-RTRLGKKQLKSLRIVKG 133
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>RL13_HELPY (P56038) 50S ribosomal protein L13|
          Length = 141

 Score = 36.6 bits (83), Expect = 0.073
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
 Frame = +1

Query: 31  VVVDARHHMLGRLASIVAKELLNGQR------------VVVVRCEEICMSGGLVRQKMKY 174
           VV+DA+  + GRL + +A  L    R            VVV+   ++  SG  +  K  +
Sbjct: 15  VVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYF 74

Query: 175 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
                       +   +  +AP K+    +RGM+P KT  G+A + +LK Y     P+
Sbjct: 75  THSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
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>RL13_TREPA (O83988) 50S ribosomal protein L13|
          Length = 142

 Score = 36.6 bits (83), Expect = 0.073
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 177
           ++DA    LGR+A+ VA  L              G  VVV+  E++ +SG   + KM Y 
Sbjct: 17  LIDAAGRPLGRVAARVACLLRGKHKASYTPNQEMGDYVVVINAEKVFLSGTKPKDKMYYR 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 351
                      S   +  R P + L   ++GM+P K   G   +  +K Y G   P++
Sbjct: 77  HSGYPGGLKSVSFSALVKRRPVEPLRHAVKGMLP-KGPLGRKLIKNVKIYAGSVHPHE 133
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>RL13_STAAW (Q7A089) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STAAS (Q6G7A3) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STAAR (Q6GEL7) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STAAN (Q7A473) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STAAM (Q99S51) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13|
          Length = 145

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+V+   +I  +G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P +++  +I+GM+P  T  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLFVYGGAEHPH 133
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>RL13_STACA (Q00990) 50S ribosomal protein L13|
          Length = 145

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L             +G  V+++   +I M+G     K+
Sbjct: 15  KWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEMTGKKASDKV 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +  + P ++L  +I+GM+P  +  GE    +L  Y G   P+
Sbjct: 75  YYRHSNYPGGIKSITAGELREKNPERLLEISIKGMLP-SSRLGEKQGKKLFVYGGAEHPH 133
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>RL13_SHIFL (P0AA15) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_SALTY (P0AA13) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_SALTI (P0AA14) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECOLI (P0AA10) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECOL6 (P0AA11) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECO57 (P0AA12) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_HAEIN (P44387) 50S ribosomal protein L13|
          Length = 142

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
 Frame = +1

Query: 34  VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 177
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYW 76

Query: 178 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 333
                    + +   +  R P  ++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_STAHJ (Q4L881) 50S ribosomal protein L13|
          Length = 145

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
 Frame = +1

Query: 25  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 168
           K  V+DA    LGRL+S VA  L              G  V+++   +I ++G     K+
Sbjct: 15  KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIELTGKKESDKI 74

Query: 169 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 348
            Y            + G +    P ++L  +I+GM+P  +  GE    +L  Y G   P+
Sbjct: 75  YYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLP-SSRLGEKQGKKLFVYGGAEHPH 133
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>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois|
           homeobox protein 4)
          Length = 485

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = +3

Query: 213 PRPHPLPRPGQDPLAHHPRYDSAQDRE----GRGRACQAQGVRGCAAAV 347
           P PHPLP  G  P A  P   +A++ E     R R C       C AA+
Sbjct: 279 PHPHPLPGGGPPPRAAEPPAAAAEEEEEEAAERARGCLKPAAEECEAAL 327
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>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/78 (29%), Positives = 31/78 (39%)
 Frame = +3

Query: 213 PRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQAHGHSRRAQGS 392
           P P P P+P +  + H P         G G +     V G   A+R  +        + S
Sbjct: 98  PEPQPQPQPQRPSVCHTP---------GAGSSEPVAAVAGSGEALRGGE--------EDS 140

Query: 393 EAAAWAQVLPPGPALQGG 446
            AAAW +V  P  A  GG
Sbjct: 141 AAAAWGRVERPRAASSGG 158
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>RL13_BUCBP (Q89AE6) 50S ribosomal protein L13|
          Length = 144

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
 Frame = +1

Query: 37  VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 180
           +DA   +LGRLA+ +A  L              G  ++V+  + I ++G     K  Y  
Sbjct: 20  IDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHH 79

Query: 181 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 327
                   K +   +  R P +I+   +RGM+P K   G +   +LK Y
Sbjct: 80  TGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLP-KGPLGRSMFKKLKVY 127
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>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 210 IPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQ 359
           IPRP P PRP   P A  P+ ++ +      R  +A+G +  A   R+D+
Sbjct: 195 IPRPAPEPRPPARPSAGKPKAEAPRAHPAE-RETEARGDKRSAGLSRKDE 243
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>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +3

Query: 213 PRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQG----VRGCAAAVRQDQAHGHSRR 380
           P   P  R    P+   P      ++ GRG A  AQG     +GC    + +    HS+ 
Sbjct: 167 PHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKG 226

Query: 381 AQGSEAAAWAQVLPPGPALQGGRME 455
            + S  A+ AQ  PP    Q  R++
Sbjct: 227 HKSSRGAS-AQKSPPVQESQSERLQ 250
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>APXL_HUMAN (Q13796) Apical-like protein (APXL protein)|
          Length = 1616

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 225 PLPRPGQDPLAHHPRYDSAQDREGRGRACQA-QGVRGCAAAVRQDQAHGHSRRAQGSEAA 401
           P P  GQ P  H P+ +   D    GR     +G  GC+A  ++      + +A    AA
Sbjct: 508 PPPTVGQSPRHHLPQPEGPPDARETGRCYPLDKGAEGCSAGAQEPPRASRAEKASQRLAA 567

Query: 402 A--WA 410
           +  WA
Sbjct: 568 SITWA 572
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>Y2023_MYCBO (P64918) Hypothetical protein Mb2023|
          Length = 537

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 411 VPRLQPQNLERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPE 250
           V  L+ + L R+ +   +G V R   T + L+ G     P  L  + TADGAP+
Sbjct: 348 VSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQ 401
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>Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056|
          Length = 537

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 411 VPRLQPQNLERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPE 250
           V  L+ + L R+ +   +G V R   T + L+ G     P  L  + TADGAP+
Sbjct: 348 VSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQ 401
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>WWTR1_MOUSE (Q9EPK5) WW domain-containing transcription regulator protein 1|
           (Transcriptional coactivator with PDZ-binding motif)
          Length = 395

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
 Frame = +3

Query: 219 PHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAV------RQDQAHGHSRR 380
           PHPLP PGQ  +  H   D   D E    +            +      ++  +  HSR+
Sbjct: 7   PHPLPPPGQQVI--HVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGSHSRQ 64

Query: 381 AQGSEAAAWAQVLPPGPALQGGRMELRRH 467
           +    +        PGP L GG   +R H
Sbjct: 65  SSTDSSGG-----HPGPRLAGGAQHVRSH 88
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>RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13|
          Length = 142

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
 Frame = +1

Query: 37  VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 180
           VDA + +LGR AS ++  L              G  ++V+   +I ++G     K+ Y  
Sbjct: 18  VDATNKILGRFASAISIRLRGKHKIEYTPHLDTGDYIIVLNASKILVTGQKKINKVYYHH 77

Query: 181 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 327
                   +     I  + PAK++   ++GM+P K + G +   +LK +
Sbjct: 78  TGYIGGIKQLRFEEIMLKNPAKVIEIAVKGMLP-KGSLGRSMFKKLKVF 125
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>PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP)
          Length = 448

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 294 GRGRACQAQGVRGC-AAAVRQDQAHGHSRRAQGSEAAAWAQVLPPGPALQGG 446
           G GRA    G  G  A  V Q  AH  +  AQGS A      + P P   GG
Sbjct: 96  GTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGG 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,848,052
Number of Sequences: 219361
Number of extensions: 1792508
Number of successful extensions: 6883
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 6378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6822
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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