ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16o07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 1070 bits (540), Expect = 0.0 Identities = 606/624 (97%), Gaps = 3/624 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcc 93 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 153 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 154 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 213 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 cggatgaacaccaagccctcccacggccccatccacttccgcgccccggccaagatcctc 273 Query: 253 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgcc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 274 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgctcgcc 333 Query: 313 aggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcatt 372 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 334 aggctcaaggcgtacgagggcgtcccgccgccgtacgacaggaccaagcgcatggtcatc 393 Query: 373 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggccag 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 394 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctcggccag 453 Query: 433 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagagg 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagaga 513 Query: 493 aaggagaaggccaaggttctcgtacgacaggagaaagcagctggcgaagcttccgcgtca 552 |||||||||||||||| |||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 514 aaggagaaggccaagg-tctcctacgacaggagaaagcaactggcgaagc-tccgcgtca 571 Query: 553 aggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggccccgatc 612 ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 572 aggccgagaaggcggccga-ggagaagttgggaactcagctggagatcctagccccgatc 630 Query: 613 aaatactaagagagatcagagctt 636 |||||||||||||||| ||||||| Sbjct: 631 aaatactaagagagattagagctt 654
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 767 bits (387), Expect = 0.0 Identities = 555/607 (91%), Gaps = 3/607 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 148 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 149 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 208 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 209 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 268 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 269 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 328 Query: 253 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgcc 312 ||||||||| ||||||| ||||| |||||||||||| |||||| ||||| ||||| || Sbjct: 329 tggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggca 388 Query: 313 aggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcatt 372 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 389 aggctgaaggcgtacgagggcgtgccgccgccgtacgacaggaccaagcgcatggtcatc 448 Query: 373 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggccag 432 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 449 cccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggccag 508 Query: 433 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagagg 492 |||||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 509 ctctccaaggaggttggctggaactactatgacaccatcagggagcttgaggagaagagg 568 Query: 493 aaggagaaggccaaggttctcgtacgacaggagaaagcagctggcgaagcttccgcgtca 552 |||||||||||||||||| | || |||||||| ||||| |||||||||| | || |||| Sbjct: 569 aaggagaaggccaaggtt-gcctatgacaggaggaagcaactggcgaagc-tgcgtgtca 626 Query: 553 aggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggccccgatc 612 |||| |||||||||||||| ||||||| |||| ||||||||||||| || || |||||| Sbjct: 627 aggctgagaaggcagccga-ggagaagctgggtcctcagctggagattcttgctccgatc 685 Query: 613 aaatact 619 ||||||| Sbjct: 686 aaatact 692
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 767 bits (387), Expect = 0.0 Identities = 555/607 (91%), Gaps = 3/607 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 158 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 159 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 218 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 219 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 278 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 279 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 338 Query: 253 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgcc 312 ||||||||| ||||||| ||||| |||||||||||| |||||| ||||| ||||| || Sbjct: 339 tggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggca 398 Query: 313 aggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcatt 372 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 aggctgaaggcgtacgagggcgtgccgccgccgtacgacaggaccaagcgcatggtcatc 458 Query: 373 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggccag 432 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 459 cccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggccag 518 Query: 433 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagagg 492 |||||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 519 ctctccaaggaggttggctggaactactatgacaccatcagggagcttgaggagaagagg 578 Query: 493 aaggagaaggccaaggttctcgtacgacaggagaaagcagctggcgaagcttccgcgtca 552 |||||||||||||||||| | || |||||||| ||||| |||||||||| | || |||| Sbjct: 579 aaggagaaggccaaggtt-gcctatgacaggaggaagcaactggcgaagc-tgcgtgtca 636 Query: 553 aggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggccccgatc 612 |||| |||||||||||||| ||||||| |||| ||||||||||||| || || |||||| Sbjct: 637 aggctgagaaggcagccga-ggagaagctgggtcctcagctggagattcttgctccgatc 695 Query: 613 aaatact 619 ||||||| Sbjct: 696 aaatact 702
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 767 bits (387), Expect = 0.0 Identities = 555/607 (91%), Gaps = 3/607 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 158 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 159 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 218 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 219 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 278 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 279 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 338 Query: 253 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgcc 312 ||||||||| ||||||| ||||| |||||||||||| |||||| ||||| ||||| || Sbjct: 339 tggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggca 398 Query: 313 aggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcatt 372 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 aggctgaaggcgtacgagggcgtgccgccgccgtacgacaggaccaagcgcatggtcatc 458 Query: 373 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggccag 432 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 459 cccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggccag 518 Query: 433 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagagg 492 |||||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 519 ctctccaaggaggttggctggaactactatgacaccatcagggagcttgaggagaagagg 578 Query: 493 aaggagaaggccaaggttctcgtacgacaggagaaagcagctggcgaagcttccgcgtca 552 |||||||||||||||||| | || |||||||| ||||| |||||||||| | || |||| Sbjct: 579 aaggagaaggccaaggtt-gcctatgacaggaggaagcaactggcgaagc-tgcgtgtca 636 Query: 553 aggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggccccgatc 612 |||| |||||||||||||| ||||||| |||| ||||||||||||| || || |||||| Sbjct: 637 aggctgagaaggcagccga-ggagaagctgggtcctcagctggagattcttgctccgatc 695 Query: 613 aaatact 619 ||||||| Sbjct: 696 aaatact 702
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 587 bits (296), Expect = e-164 Identities = 533/608 (87%), Gaps = 3/608 (0%) Strand = Plus / Plus Query: 12 gggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggc 71 |||||||||||| |||||| | ||||||||||| |||||||||||||| ||||| || | Sbjct: 74 gggcgtgtgcgcgaagcgcatcgtggtggacgcgcgccaccacatgctgggccgtctctc 133 Query: 72 gtcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgagga 131 |||||| | ||||||||||||||||| |||||| ||||| || |||||||||||||| Sbjct: 134 ctcgatcatagccaaggagctgctcaatgggcagaaggtggtcgtcgtccgctgcgagga 193 Query: 132 gatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaa 191 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 194 gatctgcatgtcgggcggcctcgtccgtcagaagatgaagtacctccgcttcctccgcaa 253 Query: 192 gaggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcct 251 | |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 254 gcggatgaacaccaagccgtcccacgggcccatccacttccgcgcccccgccaagatcct 313 Query: 252 ctggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgc 311 ||||||||||||||||| |||||||||||||||||| |||||| ||||| || || || Sbjct: 314 gtggcgcaccatccgcgggatgattccgcacaagaccaagaggggggaggcggctctggc 373 Query: 312 caggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcat 371 ||||||||| |||||||||| || |||||||||||||||| ||||||||| |||||||| Sbjct: 374 gaggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgtatggtcat 433 Query: 372 tcccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggcca 431 || ||||| || |||||||||||||| |||||||| |||| |||||||||||| ||| | Sbjct: 434 ccctgacgctcttaaggttctgaggctacagcctggacacaagtactgcctcctcggcga 493 Query: 432 gctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagag 491 |||||| ||||||||||| ||||||||| |||||||||||||| || ||||| ||||| Sbjct: 494 gctctctaaggaggtcgggtggaactaccatgacaccatcagggaacttgaggagaagag 553 Query: 492 gaaggagaaggccaaggttctcgtacgacaggagaaagcagctggcgaagcttccgcgtc 551 ||||||||||||||||||| | ||||| |||| ||||| |||| |||| | || ||| Sbjct: 554 gaaggagaaggccaaggtt-gcctacgagaggaagaagcaattggccaagc-tgcgtgtc 611 Query: 552 aaggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggccccgat 611 |||||||||||||||||||| |||||||||||| ||||| ||||||| || ||||| || Sbjct: 612 aaggccgagaaggcagccga-ggagaagttggggtctcagttggagattcttgcccctat 670 Query: 612 caaatact 619 ||| |||| Sbjct: 671 caagtact 678
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 496 bits (250), Expect = e-137 Identities = 410/465 (88%) Strand = Plus / Plus Query: 12 gggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggc 71 |||||||||||| |||||| | ||||||||||| |||||||||||||| ||||| || | Sbjct: 562 gggcgtgtgcgcgaagcgcatcgtggtggacgcgcgccaccacatgctgggccgtctctc 621 Query: 72 gtcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgagga 131 |||||| | ||||||||||||||||| |||||| |||||||| |||||||||||||| Sbjct: 622 ctcgatcatagccaaggagctgctcaatgggcagaaggtggtggtcgtccgctgcgagga 681 Query: 132 gatctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaa 191 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 682 gatctgcatgtcgggcggcctcgtccgtcagaagatgaagtacctccgcttcctccgcaa 741 Query: 192 gaggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcct 251 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gcggatgaacaccaagccgtcccacggccccatccacttccgcgccccggccaagatcct 801 Query: 252 ctggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgc 311 ||||||||||||||||| |||||||||||||||||| | |||| || || || Sbjct: 802 gtggcgcaccatccgcgggatgattccgcacaagaccaaaannnnnaaggcggctctggc 861 Query: 312 caggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcat 371 ||||||||| |||||||||| || |||||||||||||||| ||||||||| |||||||| Sbjct: 862 gaggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgtatggtcat 921 Query: 372 tcccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggcca 431 || ||||| || |||||||||||||| |||||||| |||| |||||||||||| ||| | Sbjct: 922 ccctgacgctcttaaggttctgaggctacagcctggacacaagtactgcctcctcggcga 981 Query: 432 gctctccaaggaggtcggatggaactacgccgacaccatcaggga 476 |||||| ||||||||||| ||||||||| |||||||||||||| Sbjct: 982 gctctctaaggaggtcgggtggaactaccatgacaccatcaggga 1026 Score = 69.9 bits (35), Expect = 1e-08 Identities = 63/71 (88%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 549 gtcaaggccgagaaggcagccgagggagaagttgggaactcagctggagatcctggcccc 608 ||||||||||||||||||||||| |||||||||||| ||||| ||||||| || ||||| Sbjct: 1097 gtcaaggccgagaaggcagccga-ggagaagttggggtctcagttggagattcttgcccc 1155 Query: 609 gatcaaatact 619 ||||| |||| Sbjct: 1156 tatcaagtact 1166
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 494 bits (249), Expect = e-136 Identities = 435/497 (87%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||| ||||| |||||| | ||||||||||| |||||||||||||| ||||||||| || Sbjct: 64 ggcgtatgcgcgaagcgcatcgtggtggacgcgcgccaccacatgctgggccgcctgtcg 123 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || || | |||||||| |||||||| |||||| ||||| || ||||||||||||||| Sbjct: 124 tccattattgccaaggaactgctcaatgggcagaaggtggtcgtcgtccgctgcgaggag 183 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 ||||| ||||| || || ||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 184 atctgtatgtcgggtgggctcgtacgccagaagatgaagtacctccgctttctccgcaag 243 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| Sbjct: 244 cggatgaacaccaagccatcccatgggcccatccacttccgcgccccgtccaagatcctg 303 Query: 253 tggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgcc 312 ||||||||||||||||| |||||||||||||||||| |||||| ||||| || || || Sbjct: 304 tggcgcaccatccgcgggatgattccgcacaagaccaagaggggggaggcggctctggcg 363 Query: 313 aggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcatt 372 ||||||||| |||||||||| || |||||||||||||||| |||||||||| ||||||| Sbjct: 364 aggctcaagacgtacgagggcgtcccgccgccgtacgacaagaccaagcgcctggtcatc 423 Query: 373 cccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggccag 432 || ||||| || ||||||||||||||||| || || |||| |||||||||||| || || Sbjct: 424 cctgacgctcttaaggttctgaggctgcaaccaggacacaagtactgcctccttggggag 483 Query: 433 ctctccaaggaggtcggatggaactacgccgacaccatcagggagctggaggaaaagagg 492 || || ||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 484 ctttctaaggaggtcggatggaactaccatgacaccatcagggagcttgaggagaagagg 543 Query: 493 aaggagaaggccaaggt 509 ||||||||||| ||||| Sbjct: 544 aaggagaaggctaaggt 560
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 396 bits (200), Expect = e-107 Identities = 410/480 (85%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 417 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaaggtt 390 || || || || || |||||| | ||||||||||||||| | |||||||| ||||||||| Sbjct: 418 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 477 Query: 391 ctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcgga 450 || | || ||||| || |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 478 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 537 Query: 451 tggaactacgccgacaccatcagggagctggaggaaaagaggaaggagaaggccaaggtt 510 ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| |||||| Sbjct: 538 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 597
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 396 bits (200), Expect = e-107 Identities = 410/480 (85%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 421 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaaggtt 390 || || || || || |||||| | ||||||||||||||| | |||||||| ||||||||| Sbjct: 422 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 481 Query: 391 ctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcgga 450 || | || ||||| || |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 482 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 541 Query: 451 tggaactacgccgacaccatcagggagctggaggaaaagaggaaggagaaggccaaggtt 510 ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| |||||| Sbjct: 542 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 601
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 396 bits (200), Expect = e-107 Identities = 410/480 (85%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 118 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 177 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 178 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 237 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 238 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 297 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 298 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 357 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 358 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 417 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaaggtt 390 || || || || || |||||| | ||||||||||||||| | |||||||| ||||||||| Sbjct: 418 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 477 Query: 391 ctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcgga 450 || | || ||||| || |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 478 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 537 Query: 451 tggaactacgccgacaccatcagggagctggaggaaaagaggaaggagaaggccaaggtt 510 ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| |||||| Sbjct: 538 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 597
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 396 bits (200), Expect = e-107 Identities = 410/480 (85%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 122 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 181 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 182 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 241 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 242 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 301 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 302 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 361 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 362 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 421 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaaggtt 390 || || || || || |||||| | ||||||||||||||| | |||||||| ||||||||| Sbjct: 422 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaaggtt 481 Query: 391 ctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcgga 450 || | || ||||| || |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 482 cttcgcctccagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggc 541 Query: 451 tggaactacgccgacaccatcagggagctggaggaaaagaggaaggagaaggccaaggtt 510 ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| |||||| Sbjct: 542 tggaactaccacgacaccatcagggaattggaggagaagagaaaggagaaggctaaggtt 601
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 391 bits (197), Expect = e-105 Identities = 242/257 (94%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 30899494 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 30899553 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 30899554 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 30899613 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30899614 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 30899673 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 30899674 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 30899733 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 30899734 tggcgcaccgtccgcgg 30899750 Score = 351 bits (177), Expect = 2e-93 Identities = 238/257 (92%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 30886813 ggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatgctcagccgcctggct 30886754 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 30886753 tccatcatcgccaaggagctcctcaacgggaagcgcgtggtggtcgtccgctgctaggag 30886694 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30886693 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-aag 30886635 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 30886634 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 30886575 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 30886574 tggcgcaccgtccgcgg 30886558 Score = 153 bits (77), Expect = 9e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 30899850 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 30899909 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 30899910 ggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30899966 Score = 137 bits (69), Expect = 5e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 30886442 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 30886383 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 30886382 gtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30886326 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 30900058 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30900117 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 30900118 tggctggaactactatgacaccatcaggg 30900146 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 30886224 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30886165 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 30886164 tggctggaactactatgacaccatcaggg 30886136 Score = 115 bits (58), Expect = 2e-22 Identities = 127/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 474 ggagctggaggaaaagaggaaggagaaggccaaggttctcgtacgacaggagaaagcagc 533 |||||| ||||| |||||||||||||||||||||||| | || |||||||| ||||| | Sbjct: 30900981 ggagcttgaggagaagaggaaggagaaggccaaggtt-gcctatgacaggaggaagcaac 30901039 Query: 534 tggcgaagcttccgcgtcaaggccgagaaggcagccgagggagaagttgggaactcagct 593 ||||||||| | || |||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct: 30901040 tggcgaagc-tgcgtgtcaaggctgagaaggcagccga-ggagaagctgggtcctcagct 30901097 Query: 594 ggagatcctggccccgatcaaatact 619 |||||| || || ||||||||||||| Sbjct: 30901098 ggagattcttgctccgatcaaatact 30901123
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 391 bits (197), Expect = e-105 Identities = 242/257 (94%) Strand = Plus / Minus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 43596 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 43537 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 43536 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 43477 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 43476 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 43417 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 43416 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 43357 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 43356 tggcgcaccgtccgcgg 43340 Score = 351 bits (177), Expect = 2e-93 Identities = 238/257 (92%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 56277 ggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatgctcagccgcctggct 56336 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 56337 tccatcatcgccaaggagctcctcaacgggaagcgcgtggtggtcgtccgctgctaggag 56396 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 56397 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-aag 56455 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 56456 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 56515 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 56516 tggcgcaccgtccgcgg 56532 Score = 153 bits (77), Expect = 9e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 43240 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 43181 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 43180 ggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 43124 Score = 137 bits (69), Expect = 5e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 56648 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 56707 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 56708 gtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 56764 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 56866 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 56925 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 56926 tggctggaactactatgacaccatcaggg 56954 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 43032 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 42973 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 42972 tggctggaactactatgacaccatcaggg 42944 Score = 115 bits (58), Expect = 2e-22 Identities = 127/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Minus Query: 474 ggagctggaggaaaagaggaaggagaaggccaaggttctcgtacgacaggagaaagcagc 533 |||||| ||||| |||||||||||||||||||||||| | || |||||||| ||||| | Sbjct: 42109 ggagcttgaggagaagaggaaggagaaggccaaggtt-gcctatgacaggaggaagcaac 42051 Query: 534 tggcgaagcttccgcgtcaaggccgagaaggcagccgagggagaagttgggaactcagct 593 ||||||||| | || |||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct: 42050 tggcgaagc-tgcgtgtcaaggctgagaaggcagccga-ggagaagctgggtcctcagct 41993 Query: 594 ggagatcctggccccgatcaaatact 619 |||||| || || ||||||||||||| Sbjct: 41992 ggagattcttgctccgatcaaatact 41967
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 391 bits (197), Expect = e-105 Identities = 242/257 (94%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 30990017 ggcgtgtgcgcgccgcgcgtggtggtggacgcgcgccaccacatgctcggccgcctggcc 30990076 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 30990077 tccatcatcgccaaggagctcctcaacgggcagcgcgtggtggtcgtccgctgcgaggag 30990136 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30990137 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 30990196 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 30990197 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 30990256 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 30990257 tggcgcaccgtccgcgg 30990273 Score = 351 bits (177), Expect = 2e-93 Identities = 238/257 (92%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 30977336 ggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatgctcagccgcctggct 30977277 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 30977276 tccatcatcgccaaggagctcctcaacgggaagcgcgtggtggtcgtccgctgctaggag 30977217 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30977216 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-aag 30977158 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 30977157 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 30977098 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 30977097 tggcgcaccgtccgcgg 30977081 Score = 153 bits (77), Expect = 9e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 30990373 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 30990432 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 30990433 ggcgtgccgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30990489 Score = 137 bits (69), Expect = 5e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 30976965 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 30976906 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 30976905 gtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 30976849 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 30990581 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30990640 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 30990641 tggctggaactactatgacaccatcaggg 30990669 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 30976747 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 30976688 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 30976687 tggctggaactactatgacaccatcaggg 30976659 Score = 115 bits (58), Expect = 2e-22 Identities = 127/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 474 ggagctggaggaaaagaggaaggagaaggccaaggttctcgtacgacaggagaaagcagc 533 |||||| ||||| |||||||||||||||||||||||| | || |||||||| ||||| | Sbjct: 30991504 ggagcttgaggagaagaggaaggagaaggccaaggtt-gcctatgacaggaggaagcaac 30991562 Query: 534 tggcgaagcttccgcgtcaaggccgagaaggcagccgagggagaagttgggaactcagct 593 ||||||||| | || |||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct: 30991563 tggcgaagc-tgcgtgtcaaggctgagaaggcagccga-ggagaagctgggtcctcagct 30991620 Query: 594 ggagatcctggccccgatcaaatact 619 |||||| || || ||||||||||||| Sbjct: 30991621 ggagattcttgctccgatcaaatact 30991646
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 363 bits (183), Expect = 5e-97 Identities = 258/283 (91%) Strand = Plus / Plus Query: 192 gaggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcct 251 |||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 117 gaggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcct 176 Query: 252 ctggcgcaccatccgcggtatgattccgcacaagaccgcgaggggcgaggccgcgcttgc 311 |||||||||| ||||||| ||||| |||||||||||| |||||| ||||| ||||| || Sbjct: 177 ctggcgcaccgtccgcggcatgatcccgcacaagaccaagaggggagaggcggcgctggc 236 Query: 312 caggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcat 371 ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 237 aaggctgaaggcgtacgaggtcgtgacgccgccgtacgacaggaccaagcgcatggtcat 296 Query: 372 tcccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgcctcctgggcca 431 |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 297 ccccgacgcgctcaaggttctgaggctgcagcctgggcacaagtactgcctcctcggcca 356 Query: 432 gctctccaaggaggtcggatggaactacgccgacaccatcagg 474 ||||||||||||||| || ||||||||| |||||||||||| Sbjct: 357 gctctccaaggaggttggctggaactactatgacaccatcagg 399 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 16 ggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatgctcagccgcctggct 75 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtg 114 || ||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 76 tccatcatcgccaaggagctcctcaacgggaagcgcgtggtg 117
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 351 bits (177), Expect = 2e-93 Identities = 238/257 (92%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct: 54303 ggcgtgtgcgcgccgcgcgtcgtggtggacgcgcgccaccacatgctcagccgcctggct 54362 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 || ||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 54363 tccatcatcgccaaggagctcctcaacgggaagcgcgtggtggtcgtccgctgctaggag 54422 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 54423 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccg-aag 54481 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 54482 aggatgaacaccaagccctcccatggccccatccacttccgctcccccgccaagatcctc 54541 Query: 253 tggcgcaccatccgcgg 269 ||||||||| ||||||| Sbjct: 54542 tggcgcaccgtccgcgg 54558 Score = 137 bits (69), Expect = 5e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| |||||||||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 54674 atgatcccgcacaagaccaagaggggagaggcggcgctggcaaggctgaaggcgtacgag 54733 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 54734 gtcgtgacgccgccgtacgacaggaccaagcgcatggtcatccccgacgcgctcaag 54790 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 54892 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 54951 Query: 447 cggatggaactacgccgacaccatcaggg 475 || ||||||||| ||||||||||||| Sbjct: 54952 tggctggaactactatgacaccatcaggg 54980
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 305 bits (154), Expect = 1e-79 Identities = 229/254 (90%) Strand = Plus / Plus Query: 13 ggcgtgtgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcg 72 ||||||||||| |||||| | ||||||||||| ||||||||||||||||| |||||| || Sbjct: 68895 ggcgtgtgcgcgaagcgcatcgtggtggacgcgcgccaccacatgctcggacgcctgtcg 68954 Query: 73 tcgatcgtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggag 132 ||||| |||||||||||||||| || |||||| ||||| || ||||||||||||||| Sbjct: 68955 tcgattatcgccaaggagctgctgaatgggcagaaggtggtcgtcgtccgctgcgaggag 69014 Query: 133 atctgcatgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaag 192 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 69015 atctgcatgtcgggcggcctcgtccgccagaagatgaagtacctccgcttcctccgcaag 69074 Query: 193 aggatgaacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctc 252 ||||||||||||||||| || ||||||||||| |||||||| ||||| ||||||||| Sbjct: 69075 aggatgaacaccaagccgtctcacggccccattcacttccgtgcccccagcaagatcctg 69134 Query: 253 tggcgcaccatccg 266 |||||||||||||| Sbjct: 69135 tggcgcaccatccg 69148 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| ||| ||||||| |||||||| Sbjct: 69466 ggttctgaggctgcagcctgggcacaagtactgcctcctcggcgagctctctaaggaggt 69525 Query: 447 cggatggaactacgccgacaccatcaggg 475 ||||||||||||| ||||||||||||| Sbjct: 69526 cggatggaactaccatgacaccatcaggg 69554 Score = 107 bits (54), Expect = 5e-20 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 474 ggagctggaggaaaagaggaaggagaaggccaaggttctcgtacgacaggagaaagcagc 533 |||||| ||||| |||||||||||||||||||||||| | || || ||||| ||||| | Sbjct: 70333 ggagcttgaggagaagaggaaggagaaggccaaggttgcc-tatgagaggaggaagcaac 70391 Query: 534 tggcgaagcttccgcgtcaaggccgagaaggcagccgagggagaagttgggaactcagct 593 |||| ||||| | | |||||||| |||||| ||||||||| ||||| ||||| ||||||| Sbjct: 70392 tggccaagctgc-gtgtcaaggctgagaagacagccgagg-agaagctgggatctcagct 70449 Query: 594 ggagatcctggccccgatcaaatact 619 |||||| || |||||||||||||||| Sbjct: 70450 ggagattcttgccccgatcaaatact 70475 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||||||||| |||||| |||||| ||||| || ||||| ||||||||| | |||||| Sbjct: 69252 atgattccgcataagaccaagaggggagaggcggctcttgcaaggctcaagacctacgag 69311 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgc 380 || || |||||||||||||||| |||||||||| ||||||| || ||||| Sbjct: 69312 ggcgtcccgccgccgtacgacaagaccaagcgcgtggtcatccctgacgc 69361
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 280 bits (141), Expect = 6e-72 Identities = 303/357 (84%) Strand = Plus / Minus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 524644 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 524585 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 524584 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 524525 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 524524 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 524465 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 524464 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 524405 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 524404 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 524345 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || || || || || |||||| | ||||||||||||||| | |||||||| |||||| Sbjct: 524344 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 524288 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 400 cagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcggatggaactac 459 ||||| || |||| |||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 524199 cagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactac 524140 Query: 460 gccgacaccatcaggg 475 |||||||||||||| Sbjct: 524139 cacgacaccatcaggg 524124 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 479 tggaggaaaagaggaaggagaaggccaaggtt 510 ||||||| ||||| ||||||||||| |||||| Sbjct: 523059 tggaggagaagagaaaggagaaggctaaggtt 523028
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 280 bits (141), Expect = 6e-72 Identities = 303/357 (84%) Strand = Plus / Minus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 126808 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 126749 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 126748 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 126689 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 126688 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 126629 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 126628 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 126569 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 126568 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 126509 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || || || || || |||||| | ||||||||||||||| | |||||||| |||||| Sbjct: 126508 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 126452 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 400 cagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcggatggaactac 459 ||||| || |||| |||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 126363 cagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactac 126304 Query: 460 gccgacaccatcaggg 475 |||||||||||||| Sbjct: 126303 cacgacaccatcaggg 126288 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 479 tggaggaaaagaggaaggagaaggccaaggtt 510 ||||||| ||||| ||||||||||| |||||| Sbjct: 125223 tggaggagaagagaaaggagaaggctaaggtt 125192
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 280 bits (141), Expect = 6e-72 Identities = 303/357 (84%) Strand = Plus / Minus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| || ||||||||||| || || ||||||||| | || || |||||| Sbjct: 78556 gtggtggtggacgcgcggcaccacatgctggggcggctggcgtcgctggtggcgaaggag 78497 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || || ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 78496 ctcctgaacgggcagcgggtggtggtggtgcggtgcgaggagatgtgcatctccggcggg 78437 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 78436 ctcgtccggcagaagatgaagtacctccggttcctccgcaagcggatgaacaccaagccc 78377 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 ||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| Sbjct: 78376 tcccatggccccatccacttccgcgccccctcccgcatcttctggcgcaccgtccgcggc 78317 Query: 271 atgattccgcacaagaccgcgaggggcgaggccgcgcttgccaggctcaaggcgtacgag 330 ||||| || ||||||||| | | ||||||||||| || |||| |||||||| | ||| Sbjct: 78316 atgatcccccacaagaccccccgcggcgaggccgccctcgccaacctcaaggccttcgac 78257 Query: 331 ggtgtgccgccgccgtacgacaggaccaagcgcatggtcattcccgacgcgctcaag 387 || || || || || |||||| | ||||||||||||||| | |||||||| |||||| Sbjct: 78256 ggcgtcccccctccctacgaccgcaccaagcgcatggtcgtccccgacgccctcaag 78200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 400 cagcctgggcacaggtactgcctcctgggccagctctccaaggaggtcggatggaactac 459 ||||| || |||| |||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 78111 cagcccggccacaagtactgcctcctcggccagctctccaaggaggtcggctggaactac 78052 Query: 460 gccgacaccatcaggg 475 |||||||||||||| Sbjct: 78051 cacgacaccatcaggg 78036 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 479 tggaggaaaagaggaaggagaaggccaaggtt 510 ||||||| ||||| ||||||||||| |||||| Sbjct: 76971 tggaggagaagagaaaggagaaggctaaggtt 76940
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 246 bits (124), Expect = 8e-62 Identities = 157/168 (93%) Strand = Plus / Plus Query: 292 aggggcgaggccgcgcttgccaggctcaaggcgtacgagggtgtgccgccgccgtacgac 351 ||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 409 aggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgac 468 Query: 352 aggaccaagcgcatggtcattcccgacgcgctcaaggttctgaggctgcagcctgggcac 411 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 469 aggaccaagcgcatggtcatccccgacgcgctcaaggttctgaggctgcagcctgggcac 528 Query: 412 aggtactgcctcctgggccagctctccaaggaggtcggatggaactac 459 | |||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 529 aagtactgcctcctcggccagctctccaaggaggttggctggaactac 576
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 292 aggggcgaggccgcgcttgccaggctcaaggcgtacgagggtgtgccgccgccgtacgac 351 ||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 110162 aggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgac 110221 Query: 352 aggaccaagcgcatggtcattcccgacgcgctcaag 387 |||||||||||||||||||| ||||||||||||||| Sbjct: 110222 aggaccaagcgcatggtcatccccgacgcgctcaag 110257 Score = 113 bits (57), Expect = 8e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 110358 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 110417 Query: 447 cggatggaactac 459 || ||||||||| Sbjct: 110418 tggctggaactac 110430
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 292 aggggcgaggccgcgcttgccaggctcaaggcgtacgagggtgtgccgccgccgtacgac 351 ||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 14751 aggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgac 14810 Query: 352 aggaccaagcgcatggtcattcccgacgcgctcaag 387 |||||||||||||||||||| ||||||||||||||| Sbjct: 14811 aggaccaagcgcatggtcatccccgacgcgctcaag 14846 Score = 113 bits (57), Expect = 8e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 14947 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 15006 Query: 447 cggatggaactac 459 || ||||||||| Sbjct: 15007 tggctggaactac 15019
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 292 aggggcgaggccgcgcttgccaggctcaaggcgtacgagggtgtgccgccgccgtacgac 351 ||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 12942826 aggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgac 12942885 Query: 352 aggaccaagcgcatggtcattcccgacgcgctcaag 387 |||||||||||||||||||| ||||||||||||||| Sbjct: 12942886 aggaccaagcgcatggtcatccccgacgcgctcaag 12942921 Score = 113 bits (57), Expect = 8e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 12943022 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 12943081 Query: 447 cggatggaactac 459 || ||||||||| Sbjct: 12943082 tggctggaactac 12943094
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 292 aggggcgaggccgcgcttgccaggctcaaggcgtacgagggtgtgccgccgccgtacgac 351 ||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 13023033 aggggagaggcggcgctggcaaggctgaaggcgtacgagggcgtgccgccgccgtacgac 13023092 Query: 352 aggaccaagcgcatggtcattcccgacgcgctcaag 387 |||||||||||||||||||| ||||||||||||||| Sbjct: 13023093 aggaccaagcgcatggtcatccccgacgcgctcaag 13023128 Score = 113 bits (57), Expect = 8e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 387 ggttctgaggctgcagcctgggcacaggtactgcctcctgggccagctctccaaggaggt 446 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 13023229 ggttctgaggctgcagcctgggcacaagtactgcctcctcggccagctctccaaggaggt 13023288 Query: 447 cggatggaactac 459 || ||||||||| Sbjct: 13023289 tggctggaactac 13023301
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 129 bits (65), Expect = 1e-26 Identities = 209/257 (81%) Strand = Plus / Minus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| | ||||||||||| || || ||||||||||| || || |||||| Sbjct: 641 gtggtggtggacgcaaggcaccacatgcttggtcgtctggcgtcgatagtggcgaaggag 582 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || ||||| || ||| || |||||||| | ||||||||||||||||| ||||| || Sbjct: 581 cttctcaatggtcagaaggttgtggtggttaggtgcgaggagatctgcatttccggtggg 522 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 ||||| | ||||| |||||||| | | ||||||||||||||||||||||| ||||| Sbjct: 521 ctcgtgagacagaaaatgaagtatatgaggttcctccgtaagaggatgaacactaagccc 462 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggt 270 || || || |||||||| ||||| || || | |||||| ||||||||||| | || ||| Sbjct: 461 tctcatggtcccatccatttccgtgctccttctaagatcttctggcgcaccgttcgaggt 402 Query: 271 atgattccgcacaagac 287 ||||| || |||||||| Sbjct: 401 atgataccacacaagac 385 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 442 gaggtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaaggagaag 501 ||||| |||||||||||| ||| ||||||| ||||||||| | ||||| ||||||||| Sbjct: 230 gaggttggatggaactactacgataccatcactgagctggagaagaagagaaaggagaag 171 Query: 502 gc 503 || Sbjct: 170 gc 169
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 107 bits (54), Expect = 5e-20 Identities = 180/222 (81%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 |||||||||||||| |||||||||||||| || | || |||||||| | ||||| ||| Sbjct: 13 gtggtggtggacgcgcgccaccacatgctggggaggctcgcgtcgataatagccaaagag 72 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 ||||| ||||| ||| ||||||||||| | ||||| ||||| ||| |||| || ||| Sbjct: 73 ctgctgaacggtcagaaagtggtggtggtgaggtgcgaagagatatgcttgtcgggaggc 132 Query: 151 ctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagcca 210 || || | ||||||||||||||||| | ||||| || || | |||||||||||||| Sbjct: 133 cttgtgaggcagaagatgaagtacctgaggttccttcgcaaacgcatgaacaccaagcct 192 Query: 211 tcccacggccccatccacttccgcgccccggccaagatcctc 252 || ||||| |||||||| |||||||| || ||||||||||| Sbjct: 193 tctcacggacccatccatttccgcgctccctccaagatcctc 234
>ref|NM_111591.2| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.1 mRNA, complete cds Length = 881 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 86 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 145 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 146 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 205 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 206 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 265 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 266 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 325 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 326 accgttcgcggtatgattccacacaagac 354 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 512 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 564
>ref|NM_001035577.1| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.2 mRNA, complete cds Length = 893 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 95 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 154 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 155 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 214 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 215 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 274 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 275 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 334 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 335 accgttcgcggtatgattccacacaagac 363
>gb|AY114589.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110) mRNA, complete cds Length = 667 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 22 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 81 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 82 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 141 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 142 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 201 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 202 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 261 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 262 accgttcgcggtatgattccacacaagac 290 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 448 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 500
>gb|AY062793.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110; T1B9.24) mRNA, complete cds Length = 811 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 85 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 144 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 145 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 204 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 205 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 264 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 265 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 324 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 325 accgttcgcggtatgattccacacaagac 353 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 511 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 563
>gb|AY057551.1| Arabidopsis thaliana AT3g07110/T1B9_24 mRNA, complete cds Length = 831 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 85 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 144 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 145 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 204 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 205 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 264 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 265 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 324 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 325 accgttcgcggtatgattccacacaagac 353 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 511 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 563
>gb|AF325041.2|AF325041 Arabidopsis thaliana AT3g07110 (AT3g07110/T1B9_24) mRNA, complete cds Length = 829 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 85 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 144 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 145 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 204 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 205 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 264 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 265 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 324 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 325 accgttcgcggtatgattccacacaagac 353 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 511 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 563
>emb|BX824368.1|CNS0A5OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 63 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 122 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 123 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 182 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 183 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 242 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgc 258 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 243 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgt 302 Query: 259 accatccgcggtatgattccgcacaagac 287 ||| | |||||||||||||| |||||||| Sbjct: 303 accgttcgcggtatgattccacacaagac 331 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 489 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 541
>emb|BX822336.1|CNS0A5ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 788 Score = 101 bits (51), Expect = 3e-18 Identities = 210/263 (79%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||||||||| || || || ||||||||||| || ||| |||| ||| | || || Sbjct: 75 aagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagca 134 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || | ||| Sbjct: 135 aaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctcc 194 Query: 145 ggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacacc 204 ||||| || || || ||||||||||||||| | | || ||||||||| | |||||||| Sbjct: 195 ggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacact 254 Query: 205 aagccatcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatc 264 || || || ||||| || || |||||||| || || |||||||| ||||||| ||| | Sbjct: 255 aaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgtt 314 Query: 265 cgcggtatgattccgcacaagac 287 |||||||||||||| |||||||| Sbjct: 315 cgcggtatgattccacacaagac 337 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 495 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 547
>emb|BX822519.1|CNS0A5UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 89.7 bits (45), Expect = 1e-14 Identities = 207/261 (79%) Strand = Plus / Plus Query: 27 gcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaa 86 |||| ||||||| || || || ||||||||||| || ||| |||| ||| | || || || Sbjct: 55 gcgcttggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggttgtagcaaa 114 Query: 87 ggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccgg 146 ||| |||||||| || ||| | ||||| ||||| ||||||||||| || | ||||| Sbjct: 115 ggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgtctctccgg 174 Query: 147 cggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaa 206 ||| || || || ||||||||||||||| | | || ||||||||| | |||||||| || Sbjct: 175 cggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatgaacactaa 234 Query: 207 gccatcccacggccccatccacttccgcgccccggccaagatcctctggcgcaccatccg 266 || || ||||| || || |||||||| || || |||||||| ||||||| ||| | || Sbjct: 235 accttctcacggacctattcacttccgtgctccctccaagatcttctggcgtaccgttcg 294 Query: 267 cggtatgattccgcacaagac 287 |||||||||||| |||||||| Sbjct: 295 cggtatgattccacacaagac 315 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 473 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 525
>emb|BX822098.1|CNS0A5TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 112 gtggtggtccgctgcgaggagatctgcatgtccggcggcctcgtccgccagaagatgaag 171 ||||| ||||| ||||||||||| || | |||||||| || || || |||||||||||| Sbjct: 30 gtggttgtccggtgcgaggagatttgtctctccggcggacttgttcgtcagaagatgaag 89 Query: 172 tacctccgcttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttc 231 ||| | | || ||||||||| | |||||||| || || || ||||| || || |||||| Sbjct: 90 tacatgaggtttctccgtaagcgtatgaacactaaaccttctcacggacctattcacttc 149 Query: 232 cgcgccccggccaagatcctctggcgcaccatccgcggtatgattccgcacaagac 287 || || || |||||||| ||||||| ||| | |||||||||||||| |||||||| Sbjct: 150 cgtgctccctccaagatcttctggcgtaccgttcgcggtatgattccacacaagac 205 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 445 gtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaagga 497 ||||| |||||| || ||||||||||| |||||||||| | ||||| ||||| Sbjct: 363 gtcgggtggaaccactacgacaccatcaaggagctggagaacaagagaaagga 415
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 77.8 bits (39), Expect = 4e-11 Identities = 189/239 (79%) Strand = Plus / Minus Query: 19 tgcgccaagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatc 78 ||||| |||||||||||||| || || || ||||||||||| || ||| |||| ||| | Sbjct: 82670 tgcgcgaagcgcgtggtggttgatgctcgtcaccacatgctaggtcgcttggcttcggtt 82611 Query: 79 gtcgccaaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgc 138 || || ||||| |||||||| || ||| | ||||| ||||| ||||||||||| || Sbjct: 82610 gtagcaaaggatctgctcaatggccagaatattgtggttgtccggtgcgaggagatttgt 82551 Query: 139 atgtccggcggcctcgtccgccagaagatgaagtacctccgcttcctccgtaagaggatg 198 | |||||||| || || || ||||||||||||||| | | || ||||||||| | ||| Sbjct: 82550 ctctccggcggacttgttcgtcagaagatgaagtacatgaggtttctccgtaagcgtatg 82491 Query: 199 aacaccaagccatcccacggccccatccacttccgcgccccggccaagatcctctggcg 257 ||||| || || || ||||| || || |||||||| || || |||||||| ||||||| Sbjct: 82490 aacactaaaccttctcacggacctattcacttccgtgctccctccaagatcttctggcg 82432
>gb|AF051212.1|AF051212 Picea mariana probable 60s ribosomal protein L13a (Sb16) mRNA, complete cds Length = 918 Score = 71.9 bits (36), Expect = 3e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 31 gtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgccaaggag 90 ||||| ||||| || |||||||||||||| |||||||| || || ||| | ||||||||| Sbjct: 84 gtggttgtggatgcgcgccaccacatgcttggccgcctcgcctctatcttggccaaggag 143 Query: 91 ctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtccggcggc 150 || ||| | || ||||| ||||| ||||| || || || ||||| |||||||| || || Sbjct: 144 cttctccatggccagcgagtggttgtggtgcgttgtgaagagatatgcatgtctggtgga 203 Query: 151 ctcgtccgccagaagatgaa 170 || || || ||||||||||| Sbjct: 204 cttgttcgtcagaagatgaa 223
>ref|NM_124253.2| Arabidopsis thaliana structural constituent of ribosome AT5G48760 mRNA, complete cds Length = 834 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||| || || ||||| |||||||||||||| ||||| || ||||||||| ||| Sbjct: 64 aagcgcgttgtcgtcgacgcgcgccaccacatgcttggccgtcttgcgtcgatcaccgct 123 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 || ||||| ||||| || ||| || || | ||||| ||||| ||||| ||| | ||| Sbjct: 124 aaagagcttctcaatggccagaaagttgtcattgtccggtgcgaagagatttgcctctcc 183 Query: 145 ggcggcctcgtccgccagaagatgaagtac 174 ||||| ||||| || ||||| ||||||||| Sbjct: 184 ggcggactcgttcgtcagaaaatgaagtac 213 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 462 cgacaccatcagggagctggaggaaaagaggaaggaga 499 ||||||||||| |||||||||| |||||||||||||| Sbjct: 501 cgacaccatcaaggagctggagacaaagaggaaggaga 538
>gb|AY090359.1| Arabidopsis thaliana AT5g48760/K24G6_9 mRNA, complete cds Length = 677 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||| || || ||||| |||||||||||||| ||||| || ||||||||| ||| Sbjct: 57 aagcgcgttgtcgtcgacgcgcgccaccacatgcttggccgtcttgcgtcgatcaccgct 116 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 || ||||| ||||| || ||| || || | ||||| ||||| ||||| ||| | ||| Sbjct: 117 aaagagcttctcaatggccagaaagttgtcattgtccggtgcgaagagatttgcctctcc 176 Query: 145 ggcggcctcgtccgccagaagatgaagtac 174 ||||| ||||| || ||||| ||||||||| Sbjct: 177 ggcggactcgttcgtcagaaaatgaagtac 206 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 462 cgacaccatcagggagctggaggaaaagaggaaggaga 499 ||||||||||| |||||||||| |||||||||||||| Sbjct: 494 cgacaccatcaaggagctggagacaaagaggaaggaga 531
>gb|AY088191.1| Arabidopsis thaliana clone 4275 mRNA, complete sequence Length = 814 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||| || || ||||| |||||||||||||| ||||| || ||||||||| ||| Sbjct: 57 aagcgcgttgtcgtcgacgcgcgccaccacatgcttggccgtcttgcgtcgatcaccgct 116 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 || ||||| ||||| || ||| || || | ||||| ||||| ||||| ||| | ||| Sbjct: 117 aaagagcttctcaatggccagaaagttgtcattgtccggtgcgaagagatttgcctctcc 176 Query: 145 ggcggcctcgtccgccagaagatgaagtac 174 ||||| ||||| || ||||| ||||||||| Sbjct: 177 ggcggactcgttcgtcagaaaatgaagtac 206 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 462 cgacaccatcagggagctggaggaaaagaggaaggaga 499 ||||||||||| |||||||||| |||||||||||||| Sbjct: 494 cgacaccatcaaggagctggagacaaagaggaaggaga 531
>gb|AY122902.1| Arabidopsis thaliana At5g48760/K24G6_9 mRNA, complete cds Length = 621 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||| || || ||||| |||||||||||||| ||||| || ||||||||| ||| Sbjct: 28 aagcgcgttgtcgtcgacgcgcgccaccacatgcttggccgtcttgcgtcgatcaccgct 87 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 || ||||| ||||| || ||| || || | ||||| ||||| ||||| ||| | ||| Sbjct: 88 aaagagcttctcaatggccagaaagttgtcattgtccggtgcgaagagatttgcctctcc 147 Query: 145 ggcggcctcgtccgccagaagatgaagtac 174 ||||| ||||| || ||||| ||||||||| Sbjct: 148 ggcggactcgttcgtcagaaaatgaagtac 177 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 462 cgacaccatcagggagctggaggaaaagaggaaggaga 499 ||||||||||| |||||||||| |||||||||||||| Sbjct: 465 cgacaccatcaaggagctggagacaaagaggaaggaga 502
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Minus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 |||||||| || || ||||| |||||||||||||| ||||| || ||||||||| ||| Sbjct: 27696 aagcgcgttgtcgtcgacgcgcgccaccacatgcttggccgtcttgcgtcgatcaccgct 27637 Query: 85 aaggagctgctcaacgggcagcgcgtggtggtggtccgctgcgaggagatctgcatgtcc 144 || ||||| ||||| || ||| || || | ||||| ||||| ||||| ||| | ||| Sbjct: 27636 aaagagcttctcaatggccagaaagttgtcattgtccggtgcgaagagatttgcctctcc 27577 Query: 145 ggcggcctcgtccgccagaagatgaagtac 174 ||||| ||||| || ||||| ||||||||| Sbjct: 27576 ggcggactcgttcgtcagaaaatgaagtac 27547
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 160 cagaagatgaagtacctccgcttcctccgtaagaggatgaacaccaagccatcccacggc 219 ||||| |||||||| || | ||||| || ||||||||||| || ||||| || || || Sbjct: 202 cagaaaatgaagtatcttaggttccttcgcaagaggatgaatactaagccttctcatgga 261 Query: 220 cccatccacttccgcgccccggccaagatcctctggcgcaccatccgcggtatgattccg 279 || || |||||||| || ||| | |||||||||||| | |||||||| || |||||||| Sbjct: 262 ccaattcacttccgtgctccgtcaaagatcctctggaggaccatccgtgggatgattccc 321 Query: 280 cacaa 284 ||||| Sbjct: 322 cacaa 326
>dbj|AB049716.1| Pisum sativum ssa-6 mRNA for putative senescence-associated protein, complete cds Length = 918 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 49 caccacatgctcggccgcctggcgtcgatcgtcgccaaggagct 92 ||||||||||||||||| || || || ||||||||||||||||| Sbjct: 46 caccacatgctcggccgtcttgcctccatcgtcgccaaggagct 89 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 442 gaggtcggatggaactacgccgacaccatcagggagctggaggaaaagaggaaggag 498 ||||| |||||||| ||| ||||||||||| |||| ||||| | |||||||||||| Sbjct: 438 gaggtgggatggaattactacgacaccatcaaggagttggagaagaagaggaaggag 494
>emb|Y09971.1|CPRPL13A C.paradoxa mRNA for ribosomal protein L13a Length = 710 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 314 ggctcaaggcgtacgagggtgtgccgccgccgtacgacaggaccaagcgcatggtcattc 373 |||| ||||| | |||||| |||||||| |||||||||| || |||||||||||||| | Sbjct: 315 ggctgaaggccttcgagggcgtgccgcccccgtacgacaagatgaagcgcatggtcatcc 374 Query: 374 ccgacgcgctc 384 || | |||||| Sbjct: 375 cccaggcgctc 385
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 387 ctggaggagaagaggaaggagaaggccaag 416
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 2854 ctggaggagaagaggaaggagaaggccaag 2883
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 466 ctggaggagaagaggaaggagaaggccaag 495
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 81677 ctggaggagaagaggaaggagaaggccaag 81648
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 95013 ctggaggagaagaggaaggagaaggccaag 95042
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 188756 ctggaggagaagaggaaggagaaggccaag 188727
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||||||||||||||| Sbjct: 2109 ctggaggagaagaggaaggagaaggccaag 2080
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 479 tggaggaaaagaggaaggagaaggccaag 507 ||||||| ||||||||||||||||||||| Sbjct: 427 tggaggagaagaggaaggagaaggccaag 455 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 129 ttcctgcgtaagaggatgaacaccaa 154
>emb|AJ223363.1|LLAJ3363 Lupinus luteus mRNA for ribosomal protein L13a Length = 766 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Plus Query: 25 aagcgcgtggtggtggacgcccgccaccacatgctcggccgcctggcgtcgatcgtcgcc 84 ||||||||||| || ||||| |||||||||||||| || || || || || ||||| || Sbjct: 54 aagcgcgtggtagtcgacgcgcgccaccacatgcttggtcgtcttgcttcaatcgtggca 113 Query: 85 aaggagct 92 |||||||| Sbjct: 114 aaggagct 121
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 757 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 815
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 316 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 374
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 250
>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence Length = 208578 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 480 ggaggaaaagaggaaggagaagg 502 ||||||||||||||||||||||| Sbjct: 164530 ggaggaaaagaggaaggagaagg 164552
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 169 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 227
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 249
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 191 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 249
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 179 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 237
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 174 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 232
>ref|XM_751980.1| Ustilago maydis 521 hypothetical protein (UM00926.1) partial mRNA Length = 615 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 260 ccatccgcggtatgattccgcacaagaccgc 290 |||||||||| |||||||| ||||||||||| Sbjct: 257 ccatccgcggcatgattccccacaagaccgc 287
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 167 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 225
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 165 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 223
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 840 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 898
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 2045 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 2103
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 186 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 244
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 180 cttcctccgtaagaggatgaacaccaagccatccc 214 ||||||||| ||| ||||||||||||| ||||||| Sbjct: 166 cttcctccgcaagcggatgaacaccaacccatccc 200
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggcc 504 |||||||| |||||||||||||||||| Sbjct: 137660 ctggaggagaagaggaaggagaaggcc 137634
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 643 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 701
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 238
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 238
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggcc 504 |||||||| |||||||||||||||||| Sbjct: 1543 ctggaggagaagaggaaggagaaggcc 1517
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 238
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 147 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 205
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 677 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 735
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 155 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 213
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 77660 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 77718
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 157 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 215
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggcc 504 |||||||| |||||||||||||||||| Sbjct: 136015 ctggaggagaagaggaaggagaaggcc 136041
>gb|AC012346.9|AC012346 Homo sapiens chromosome , clone RP11-15N22, complete sequence Length = 164470 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 390 tctgaggctgcagcctgggcacaggta 416 |||||| |||||||||||||||||||| Sbjct: 12090 tctgagactgcagcctgggcacaggta 12064
>gb|AC025519.10|AC025519 Homo sapiens, clone RP11-484J3, complete sequence Length = 171464 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 390 tctgaggctgcagcctgggcacaggta 416 |||||| |||||||||||||||||||| Sbjct: 14386 tctgagactgcagcctgggcacaggta 14412
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 229
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 192 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 250
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 171 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 229
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 175 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 233
>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence Length = 163565 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 480 ggaggaaaagaggaaggagaagg 502 ||||||||||||||||||||||| Sbjct: 6084 ggaggaaaagaggaaggagaagg 6106
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 24 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 82
>emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on chromosome 13, complete sequence Length = 116416 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ggaggaaaagaggaaggagaagg 502 ||||||||||||||||||||||| Sbjct: 68010 ggaggaaaagaggaaggagaagg 67988
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 180 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 238
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ggaggaaaagaggaaggagaagg 502 ||||||||||||||||||||||| Sbjct: 122358 ggaggaaaagaggaaggagaagg 122336
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 230
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 172 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 230
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 |||||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 3669 ttcctccgcaagcggatgaacaccaacccttcccgaggcccctaccacttccgggcccc 3727
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 485 ctggaggagaagaggaaggagaaagccaag 514
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 394 ctggaggagaagagaaaggagaaggccaag 423
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||| ||||||||||||||||| Sbjct: 470 ctggaggagaagcggaaggagaaggccaag 499
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||| ||||||||||||||||| Sbjct: 499 ctggaggagaagcggaaggagaaggccaag 528
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||| |||||||||||| Sbjct: 198 ctggaggagaagaggaatgagaaggccaag 169
>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence Length = 140039 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 481 gaggaaaagaggaaggagaagg 502 |||||||||||||||||||||| Sbjct: 36566 gaggaaaagaggaaggagaagg 36545
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||||||| ||||||||||| Sbjct: 343 ctggaggagaagaggaagaagaaggccaag 372
>emb|CR721854.2|CNS0GJXG Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR734531.2|CNS0GTJM Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR734420.2|CNS0GTGJ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR733634.2|CNS0GSUP Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR733589.2|CNS0GSTG Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR733845.2|CNS0GT0K Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR731687.2|CNS0GRIK Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 555 ctggaggagaagagaaaggagaaggccaag 584
>emb|CR720193.2|CNS0GINB Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR720089.2|CNS0GIKF Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR723864.2|CNS0GLHA Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR723621.2|CNS0GLAJ Tetraodon nigroviridis full-length cDNA Length = 917 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR723218.2|CNS0GKZC Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR722644.2|CNS0GKJE Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR722480.2|CNS0GKEU Tetraodon nigroviridis full-length cDNA Length = 715 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR721533.2|CNS0GJOJ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR721501.2|CNS0GJNN Tetraodon nigroviridis full-length cDNA Length = 299 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR721288.2|CNS0GJHQ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR720827.2|CNS0GJ4X Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR720439.2|CNS0GIU5 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR719991.2|CNS0GIHP Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR719238.2|CNS0GHWS Tetraodon nigroviridis full-length cDNA Length = 719 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR718042.2|CNS0GGZK Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR717997.2|CNS0GGYB Tetraodon nigroviridis full-length cDNA Length = 890 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR717797.2|CNS0GGSR Tetraodon nigroviridis full-length cDNA Length = 232 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR716489.2|CNS0GFSI Tetraodon nigroviridis full-length cDNA Length = 292 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 9 ttcctgcgtaagaggatgaacaccaa 34
>emb|CR715865.2|CNS0GFB9 Tetraodon nigroviridis full-length cDNA Length = 232 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR715675.2|CNS0GF5Z Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR715331.2|CNS0GEWF Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR715244.2|CNS0GEU0 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR715237.2|CNS0GETT Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR712946.2|CNS0GD26 Tetraodon nigroviridis full-length cDNA Length = 892 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR711952.2|CNS0GCAK Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR711062.2|CNS0GBLU Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR710952.2|CNS0GBIS Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR708821.2|CNS0G9VL Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR708798.2|CNS0G9UY Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR707968.2|CNS0G97W Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR707793.2|CNS0G931 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR706714.2|CNS0G892 Tetraodon nigroviridis full-length cDNA Length = 894 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR706088.2|CNS0G7RO Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR705737.2|CNS0G7HX Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR704066.2|CNS0G67I Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR703887.2|CNS0G62J Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR691280.2|CNS0FWCC Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR698886.2|CNS0G27M Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR697448.2|CNS0G13O Tetraodon nigroviridis full-length cDNA Length = 715 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR691171.2|CNS0FW9B Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR685825.2|CNS0FS4T Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR690814.2|CNS0FVZE Tetraodon nigroviridis full-length cDNA Length = 903 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR689971.2|CNS0FVBZ Tetraodon nigroviridis full-length cDNA Length = 914 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR689406.2|CNS0FUWA Tetraodon nigroviridis full-length cDNA Length = 884 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR687735.2|CNS0FTLV Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR686749.2|CNS0FSUH Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR685068.2|CNS0FRJS Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR684046.2|CNS0FQRE Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR682457.2|CNS0FPJ9 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR679961.2|CNS0FNLX Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR679201.2|CNS0FN0T Tetraodon nigroviridis full-length cDNA Length = 727 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR679149.2|CNS0FMZD Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR677571.2|CNS0FLRY Tetraodon nigroviridis full-length cDNA Length = 894 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR677193.2|CNS0FLHH Tetraodon nigroviridis full-length cDNA Length = 728 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR675541.2|CNS0FK7V Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR672882.2|CNS0FI60 Tetraodon nigroviridis full-length cDNA Length = 299 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR672163.2|CNS0FHM1 Tetraodon nigroviridis full-length cDNA Length = 727 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR671303.2|CNS0FGY5 Tetraodon nigroviridis full-length cDNA Length = 719 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR669634.2|CNS0FFNS Tetraodon nigroviridis full-length cDNA Length = 728 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR669188.2|CNS0FFBE Tetraodon nigroviridis full-length cDNA Length = 299 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR668979.2|CNS0FF5L Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR664501.2|CNS0FBP7 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR662473.2|CNS0FA4V Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR661668.2|CNS0F9II Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR660204.2|CNS0F8DU Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR656627.2|CNS0F5MH Tetraodon nigroviridis full-length cDNA Length = 716 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR654883.2|CNS0F4A1 Tetraodon nigroviridis full-length cDNA Length = 727 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR653693.2|CNS0F3CZ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR649395.2|CNS0F01L Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR649309.2|CNS0EZZ7 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR649016.2|CNS0EZR2 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>gb|AC166831.3| Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence Length = 230269 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 486 aaagaggaaggagaaggccaag 507 |||||||||||||||||||||| Sbjct: 45549 aaagaggaaggagaaggccaag 45570
>emb|CR646191.2|CNS0EXKL Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR641493.2|CNS0ETY3 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR638774.2|CNS0ERUK Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR638669.2|CNS0ERRN Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR638020.2|CNS0ER9M Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR637133.2|CNS0EQKZ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR635244.2|CNS0EP4I Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR634492.2|CNS0EOJM Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR632869.2|CNS0ENAJ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR633646.2|CNS0ENW4 Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR633029.2|CNS0ENEZ Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR632663.2|CNS0EN4T Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR632233.2|CNS0EMSV Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|CR632230.2|CNS0EMSS Tetraodon nigroviridis full-length cDNA Length = 298 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttcctccgtaagaggatgaacaccaa 206 ||||| |||||||||||||||||||| Sbjct: 15 ttcctgcgtaagaggatgaacaccaa 40
>emb|AL391822.12| Human DNA sequence from clone RP11-494K3 on chromosome 1 Contains the 3' end of the gene for neurofascin (NFASC) and a ribosomal protein L13a (RPL13A) pseudogene, complete sequence Length = 115292 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||||||||||| ||| ||||||||| Sbjct: 35836 ctggaggaaaagaggagggaaaaggccaag 35865
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 493 ctggaggagaagagaaaggagaaggccaag 522
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 402 ctggaggagaagaggaaggagaaagccaag 431
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 2946 ctggaggagaagaggaaggagaaagccaag 2917
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 489 ctggaggagaagagaaaggagaaggccaag 518 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 184 ctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 ||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 195 ctccgcaagcggatgaacaccaacccctcccgtggcccctaccacttccgagcccc 250
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||||| |||| Sbjct: 77810 ctggaggagaagaggaaggagaaggtcaag 77781
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||| ||||||||||||||||| Sbjct: 60112 ctggaggagaagtggaaggagaaggccaag 60141
>gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complete sequence Length = 199331 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||||||||| ||||||||| ||||| Sbjct: 37374 ctggaggaaaagagaaaggagaagaccaag 37403
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 401 ctggaggagaagaggaaggagaaagccaag 430
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 1274 ctggaggagaagagaaaggagaaggccaag 1303 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 184 ctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 ||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 980 ctccgcaagcggatgaacaccaacccctcccgtggcccctaccacttccgagcccc 1035
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 486 aaagaggaaggagaaggccaag 507 |||||||||||||||||||||| Sbjct: 1413 aaagaggaaggagaaggccaag 1434
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 482 aggaaaagaggaaggagaaggccaag 507 |||| ||||||||||||||||||||| Sbjct: 505 aggagaagaggaaggagaaggccaag 530
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 162328 ctggaggagaagaggaaggagaaagccaag 162299
>gb|AC107675.13| Mus musculus chromosome 1, clone RP24-471N7, complete sequence Length = 127374 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 481 gaggaaaagaggaaggagaagg 502 |||||||||||||||||||||| Sbjct: 43693 gaggaaaagaggaaggagaagg 43714
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 482 aggaaaagaggaaggagaaggccaag 507 |||| ||||||||||||||||||||| Sbjct: 115365 aggagaagaggaaggagaaggccaag 115340
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| |||||||||||||| |||||| Sbjct: 124984 ctggaggagaagaggaaggagaaagccaag 124955
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 ctggaggaaaagaggaaggagaaggccaag 507 |||||||| ||||| ||||||||||||||| Sbjct: 464 ctggaggagaagagaaaggagaaggccaag 493 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 184 ctccgtaagaggatgaacaccaagccatcccacggccccatccacttccgcgcccc 239 ||||| ||| ||||||||||||| || |||| |||||| ||||||||| ||||| Sbjct: 170 ctccgcaagcggatgaacaccaacccctcccgtggcccctaccacttccgagcccc 225
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 tggaggaaaagaggaaggagaaggccaag 507 ||||||| |||||||||||||| |||||| Sbjct: 338 tggaggagaagaggaaggagaaagccaag 366
>ref|NM_113395.2| Arabidopsis thaliana structural constituent of ribosome AT3G24830 mRNA, complete cds Length = 882 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 364 atggtcattcccgacgcgctcaaggttctgaggctgcagcctgggcacaggtactgc 420 ||||||||||| || || |||||||| ||||||| ||| |||| |||| ||||||| Sbjct: 417 atggtcattcctgatgctctcaaggtgttgaggcttcaggctggtcacaagtactgc 473
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 tggaggaaaagaggaaggagaaggccaag 507 ||||||| ||||| ||||||||||||||| Sbjct: 556 tggaggagaagagaaaggagaaggccaag 584
>ref|XM_418218.1| PREDICTED: Gallus gallus similar to chromosome 19 open reading frame 21 (LOC420097), mRNA Length = 2960 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 ggagctggaggaaaagaggaaggag 498 |||||||||||| |||||||||||| Sbjct: 558 ggagctggaggacaagaggaaggag 582
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 aagaggaaggagaaggccaag 507 ||||||||||||||||||||| Sbjct: 115133 aagaggaaggagaaggccaag 115153
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 aagaggaaggagaaggccaag 507 ||||||||||||||||||||| Sbjct: 50579 aagaggaaggagaaggccaag 50599
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 aagaggaaggagaaggccaag 507 ||||||||||||||||||||| Sbjct: 57000 aagaggaaggagaaggccaag 57020
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 aagaggaaggagaaggccaag 507 ||||||||||||||||||||| Sbjct: 33872 aagaggaaggagaaggccaag 33892
>emb|AL109827.8|HSJ309K20 Human DNA sequence from clone RP1-309K20 on chromosome 20 Contains the 5' end of the FER1L4 gene for fer-1-like 4 (C. elegans), the C20orf124 gene for chromosome 20 open reading frame 124, the SPAG4 gene for sperm associated antigen 4, the CPNE1 gene for copine I, the RBM12 gene for RNA binding motif protein 12, the 3' end of the NIFS gene for nitrogen fixation 1 (S. cerevisiae) and four CpG islands, complete sequence Length = 98599 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 aggaaaagaggaaggagaagg 502 ||||||||||||||||||||| Sbjct: 86576 aggaaaagaggaaggagaagg 86556 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,624,022 Number of Sequences: 3902068 Number of extensions: 6624022 Number of successful extensions: 168349 Number of sequences better than 10.0: 368 Number of HSP's better than 10.0 without gapping: 367 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 166957 Number of HSP's gapped (non-prelim): 1335 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
