>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score =  157 bits (397), Expect = 2e-38
 Identities = 76/91 (83%), Positives = 80/91 (87%)
 Frame = +1

Query: 1   SIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNE 180
           SIEMAKRNL GIWNFTNPGVVSHNEILEMYRDYI+P F W NF LEEQAKVIVAPRSNNE
Sbjct: 579 SIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNE 638

Query: 181 LDTVKLKTEFPELLSIKESLIKNVFKPNQKT 273
           +D  KLK EFPELLSIKESLIK  + PN+KT
Sbjct: 639 MDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score =  156 bits (394), Expect = 4e-38
 Identities = 73/91 (80%), Positives = 82/91 (90%)
 Frame = +1

Query: 1   SIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNE 180
           SIEMAKRNL GIWNFTNPGVVSHNEILEMY+ YI+P+F W NFNLEEQAKVIVAPRSNNE
Sbjct: 574 SIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNE 633

Query: 181 LDTVKLKTEFPELLSIKESLIKNVFKPNQKT 273
           +D  KL  EFPE+LSIK+SLIK VF+PN++T
Sbjct: 634 MDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score =  149 bits (376), Expect = 5e-36
 Identities = 70/91 (76%), Positives = 80/91 (87%)
 Frame = +1

Query: 1   SIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNE 180
           SIEMAKRNL GIWNFTNPGVVSHNEILEMY++YI+P F W NF +EEQAKVIVA RSNNE
Sbjct: 577 SIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNE 636

Query: 181 LDTVKLKTEFPELLSIKESLIKNVFKPNQKT 273
           +D  KL  EFPE+LSIKESL+K VF+PN++T
Sbjct: 637 MDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

>VID21_SCHPO (O59773) Chromatin modification-related protein vid21|
          Length = 985

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 31  GIWNFTNPGVVSHNEILEMYRDYIDPNFSWK--NFNLEEQAKVIVAPRSNN 177
           GIW+F  P   +    L+ +RDY+     W   +F+ E + K+I+A R  N
Sbjct: 459 GIWSFRQPKRQNEMPRLKTHRDYVLDEMQWMSIDFSQERKWKIILAHRMAN 509

>PPSA_METJA (Q57962) Probable phosphoenolpyruvate synthase (EC 2.7.9.2)|
            (Pyruvate, water dikinase) (PEP synthase) [Contains: Mja
            pep intein (Mja pepA intein)]
          Length = 1188

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +1

Query: 94   DYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFKPNQKT 273
            D+I    ++ +    +  +  +A   NNEL +   K + P +L + E +IK   K   KT
Sbjct: 1071 DFIKEGINFVSLGTNDLTQYTIAIDRNNELVSKYYKEDHPAVLKLVEHVIKTCKKHGIKT 1130

Query: 274  S 276
            S
Sbjct: 1131 S 1131

>ATG2_YEAST (P53855) Autophagy-related protein 2 (Sporulation-specific protein|
           72)
          Length = 1592

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +2

Query: 254 SNQIRRHPRLDQMEQ----CAQSLMLMLLVRHTFTSLSGANPISMRSVLFRPGRVHALLL 421
           SN+    P++ Q EQ    C +SLM +  +   F  LS  N + M +++     VH L +
Sbjct: 269 SNEDPSEPQVTQEEQENDKCKESLMEINNLNIAFKGLSSVNDLRMSNIVIDIQDVH-LAI 327

Query: 422 QEIVSYRKS 448
            +IV  + S
Sbjct: 328 HKIVEIKNS 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,605,357
Number of Sequences: 219361
Number of extensions: 1745368
Number of successful extensions: 4473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4473
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)