>YIAO_ECOLI (P37676) 2,3-diketo-L-gulonate-binding periplasmic protein yiaO|
           precursor (2,3-DKG-binding protein) (Extracytoplasmic
           solute receptor protein yiaO)
          Length = 328

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +2

Query: 59  RYVTWSLHNKNRAGLRHFLDSFVAPEQLCANTHTAHSAGLHEQSSGLNDNKQDRPKGELK 238
           R VT++L     AGL  F  S +A + L     T+ +   H  +   ND  Q+R KGELK
Sbjct: 4   RSVTYALFI---AGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELK 60

>1B46_HUMAN (P30484) HLA class I histocompatibility antigen, B-46 alpha chain|
           precursor (MHC class I antigen B*46) (Bw-46)
          Length = 362

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 303 WTARSGTEGWRPHLSDLCMHWFTRFFMGSK 392
           W A    E WR +L  LC+ W  R+    K
Sbjct: 171 WEAAREAEQWRAYLEGLCVEWLRRYLENGK 200

>1B15_HUMAN (P30464) HLA class I histocompatibility antigen, B-15 alpha chain|
           precursor (MHC class I antigen B*15)
          Length = 362

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 303 WTARSGTEGWRPHLSDLCMHWFTRFFMGSK 392
           W A    E WR +L  LC+ W  R+    K
Sbjct: 171 WEAAREAEQWRAYLEGLCVEWLRRYLENGK 200

>SEC16_SCHPO (O14029) Multidomain vesicle coat protein|
          Length = 1995

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +2

Query: 44  LESTTRYVTWSLHNKNRAGLRHFLDSFVAPEQLCANTHTAHSAGLHEQSSGLNDNKQDRP 223
           LES     T+ +HN+N +G    LD FVA + +  +T           S  LND K + P
Sbjct: 318 LESENNESTFFVHNQNSSGQHQTLD-FVASKPV-TDTPELSKENTLVSSENLNDPKPNLP 375

Query: 224 KGELKSSHP 250
           + E+    P
Sbjct: 376 ETEVDFGEP 384

>HA1B_BOVIN (P13753) BOLA class I histocompatibility antigen, alpha chain BL3-7|
           precursor
          Length = 364

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 303 WTARSGTEGWRPHLSDLCMHWFTRFFMGSKSIFL 404
           W A    E WR +L   C+ W  R+    K   L
Sbjct: 174 WEAAGAAETWRNYLEGECVEWLRRYLENGKDTLL 207

>UXAC_BACSU (O34808) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 473

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
 Frame = -1

Query: 383 HEKSGEPVHTQVAQM-RAPAFGSR---------ACCPRDPPVSFLTHHLMDLSLKDD*IS 234
           +EKSG  +  Q  ++ +   FG+R           C  D PV  L +HL+    KD  +S
Sbjct: 119 NEKSGSAIWKQTNKLLKGEGFGARDLIVKSNVKVVCTTDDPVDSLEYHLLLKEDKDFPVS 178

Query: 233 ALP 225
            LP
Sbjct: 179 VLP 181

>KAX12_LEIQH (P45628) Potassium channel toxin alpha-KTx 1.2 precursor|
           (Charybdotoxin-2) (ChTX-Lq2) (Toxin 18-2) (Lqh 18-2)
           (ChTx-d)
          Length = 59

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 201 FNPEDCSCSPAEWAVCVLAHNCSGATNESRKCR 103
           F  E C+ S   W++C   HN +     ++KCR
Sbjct: 24  FTQESCTASNQCWSICKRLHNTNRGKCMNKKCR 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,250,619
Number of Sequences: 219361
Number of extensions: 1743877
Number of successful extensions: 4859
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4859
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)