| Clone Name | bags17c20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029A13, full insert sequence Length = 2556 Score = 422 bits (213), Expect = e-115 Identities = 465/549 (84%) Strand = Plus / Plus Query: 33 gtatggaagatttggagagcaccactcgttatgttacctggtcccttcataacaaaaacc 92 ||||||| ||||||| |||||||||||||||||| || ||||||||||| || || |||| Sbjct: 1759 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttcacaataagaacc 1818 Query: 93 gtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgctaaca 152 ||||||||||| |||| || | ||||| |||||||||| |||||||||| | |||| Sbjct: 1819 gtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtgaaca 1878 Query: 153 cacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaataaac 212 ||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 1879 cacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaataagc 1938 Query: 213 aggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatcaggtg 272 ||||||| ||||||||||| | ||||| ||| || ||||||| ||||| || | || Sbjct: 1939 aggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcacccactg 1998 Query: 273 gtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaaggctgg 332 || ||||| | || || || ||||||||||||||||| || |||||| ||||||||| Sbjct: 1999 ttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaaggctgg 2058 Query: 333 cgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatcaaag 392 | ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2059 caccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatcaaag 2118 Query: 393 agcattttcttgtcactacagaactaaagttcaattgcttcctcctgatgccaattgttg 452 |||||||||||||||| ||||| || |||||||||||||| ||||| ||||| ||||||| Sbjct: 2119 agcattttcttgtcaccacagagcttaagttcaattgctttctcctcatgccgattgttg 2178 Query: 453 acaaattagcggctcttctacgtgaagaccttgaatcagcttttgaaaacgatcttgaca 512 |||||||| |||| |||||| | ||||||||||||||||| || ||| | |||||||||| Sbjct: 2179 acaaattaccggcgcttctaagagaagaccttgaatcagccttcgaagatgatcttgaca 2238 Query: 513 acatcttgagtgtcactcgactgcgccactcacttgggcagaagaagcgagtgctagaaa 572 ||| || ||| |||| |||||||| ||||||||||||| |||| ||| || || | Sbjct: 2239 gcatatttgatgttactcagctgcgccattcacttgggcagaggaagagagatctggaga 2298 Query: 573 tcgaattga 581 ||||||||| Sbjct: 2299 tcgaattga 2307
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 258 bits (130), Expect = 2e-65 Identities = 277/326 (84%) Strand = Plus / Minus Query: 89 aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148 ||||||||||||||| |||| || | ||||| |||||||||| |||||||||| | Sbjct: 3986756 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 3986697 Query: 149 aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208 ||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 3986696 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 3986637 Query: 209 aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268 || |||||||| ||||||||||| | ||||| ||| || ||||||| ||||| || | Sbjct: 3986636 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 3986577 Query: 269 ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328 || || ||||| | || || || ||||||||||||||||| || |||||| ||||| Sbjct: 3986576 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 3986517 Query: 329 ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388 ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3986516 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 3986457 Query: 389 aaagagcattttcttgtcactacaga 414 |||||||||||||||||||| ||||| Sbjct: 3986456 aaagagcattttcttgtcaccacaga 3986431 Score = 115 bits (58), Expect = 2e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 420 agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479 ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | |||| Sbjct: 3986342 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 3986283 Query: 480 accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539 ||||||||||||| || ||| | |||||||||| ||| || ||| |||| ||||||| Sbjct: 3986282 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 3986223 Query: 540 actcacttgggcagaagaagcgagtgctagaaatcgaattga 581 | ||||||||||||| |||| ||| || || |||||||||| Sbjct: 3986222 attcacttgggcagaggaagagagatctggagatcgaattga 3986181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 33 gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81 ||||||| ||||||| |||||||||||||||||| || ||||||||||| Sbjct: 3986891 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 3986843
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 258 bits (130), Expect = 2e-65 Identities = 277/326 (84%) Strand = Plus / Minus Query: 89 aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148 ||||||||||||||| |||| || | ||||| |||||||||| |||||||||| | Sbjct: 3986738 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 3986679 Query: 149 aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208 ||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 3986678 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 3986619 Query: 209 aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268 || |||||||| ||||||||||| | ||||| ||| || ||||||| ||||| || | Sbjct: 3986618 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 3986559 Query: 269 ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328 || || ||||| | || || || ||||||||||||||||| || |||||| ||||| Sbjct: 3986558 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 3986499 Query: 329 ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388 ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3986498 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 3986439 Query: 389 aaagagcattttcttgtcactacaga 414 |||||||||||||||||||| ||||| Sbjct: 3986438 aaagagcattttcttgtcaccacaga 3986413 Score = 115 bits (58), Expect = 2e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 420 agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479 ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | |||| Sbjct: 3986324 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 3986265 Query: 480 accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539 ||||||||||||| || ||| | |||||||||| ||| || ||| |||| ||||||| Sbjct: 3986264 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 3986205 Query: 540 actcacttgggcagaagaagcgagtgctagaaatcgaattga 581 | ||||||||||||| |||| ||| || || |||||||||| Sbjct: 3986204 attcacttgggcagaggaagagagatctggagatcgaattga 3986163 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 33 gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81 ||||||| ||||||| |||||||||||||||||| || ||||||||||| Sbjct: 3986873 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 3986825
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 258 bits (130), Expect = 2e-65 Identities = 277/326 (84%) Strand = Plus / Minus Query: 89 aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148 ||||||||||||||| |||| || | ||||| |||||||||| |||||||||| | Sbjct: 23172 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 23113 Query: 149 aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208 ||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 23112 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 23053 Query: 209 aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268 || |||||||| ||||||||||| | ||||| ||| || ||||||| ||||| || | Sbjct: 23052 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 22993 Query: 269 ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328 || || ||||| | || || || ||||||||||||||||| || |||||| ||||| Sbjct: 22992 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 22933 Query: 329 ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388 ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 22932 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 22873 Query: 389 aaagagcattttcttgtcactacaga 414 |||||||||||||||||||| ||||| Sbjct: 22872 aaagagcattttcttgtcaccacaga 22847 Score = 115 bits (58), Expect = 2e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 420 agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479 ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | |||| Sbjct: 22758 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 22699 Query: 480 accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539 ||||||||||||| || ||| | |||||||||| ||| || ||| |||| ||||||| Sbjct: 22698 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 22639 Query: 540 actcacttgggcagaagaagcgagtgctagaaatcgaattga 581 | ||||||||||||| |||| ||| || || |||||||||| Sbjct: 22638 attcacttgggcagaggaagagagatctggagatcgaattga 22597 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 33 gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81 ||||||| ||||||| |||||||||||||||||| || ||||||||||| Sbjct: 23307 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 23259
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 258 bits (130), Expect = 2e-65 Identities = 277/326 (84%) Strand = Plus / Minus Query: 89 aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148 ||||||||||||||| |||| || | ||||| |||||||||| |||||||||| | Sbjct: 148732 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 148673 Query: 149 aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208 ||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 148672 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 148613 Query: 209 aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268 || |||||||| ||||||||||| | ||||| ||| || ||||||| ||||| || | Sbjct: 148612 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 148553 Query: 269 ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328 || || ||||| | || || || ||||||||||||||||| || |||||| ||||| Sbjct: 148552 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 148493 Query: 329 ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388 ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 148492 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 148433 Query: 389 aaagagcattttcttgtcactacaga 414 |||||||||||||||||||| ||||| Sbjct: 148432 aaagagcattttcttgtcaccacaga 148407 Score = 115 bits (58), Expect = 2e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 420 agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479 ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | |||| Sbjct: 148318 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 148259 Query: 480 accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539 ||||||||||||| || ||| | |||||||||| ||| || ||| |||| ||||||| Sbjct: 148258 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 148199 Query: 540 actcacttgggcagaagaagcgagtgctagaaatcgaattga 581 | ||||||||||||| |||| ||| || || |||||||||| Sbjct: 148198 attcacttgggcagaggaagagagatctggagatcgaattga 148157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 33 gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81 ||||||| ||||||| |||||||||||||||||| || ||||||||||| Sbjct: 148867 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 148819
>dbj|AB094119.1| Cyanidioschyzon merolae Cmdnm2 gene for dynamin related protein involved in chloroplast division, complete cds Length = 2889 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 412 agaactaaagttcaattgcttcctcctgatgccaattgt 450 |||||| ||||||||||||||| ||||||||||| |||| Sbjct: 2478 agaactcaagttcaattgcttcttcctgatgccagttgt 2516
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 389 aaagagcattttcttgtcactacag 413 ||||||||||||| ||||||||||| Sbjct: 160033 aaagagcattttcatgtcactacag 160057
>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5, complete sequence Length = 168421 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gaaatctagtcatccttcaga 255 ||||||||||||||||||||| Sbjct: 163891 gaaatctagtcatccttcaga 163871
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 tcgactgcgccactcacttgggca 552 ||||||||||||| |||||||||| Sbjct: 1206855 tcgactgcgccacccacttgggca 1206832
>gb|AY077688.1| Drosophila melanogaster molybdenum cofactor synthesis/low xanthine dehydrogenase (lxd) gene, partial cds Length = 3780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gccaattgttgacaaattag 461 |||||||||||||||||||| Sbjct: 1595 gccaattgttgacaaattag 1614
>emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 in linkage group 20, complete sequence Length = 175626 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ggttgaatgacaataaacag 214 |||||||||||||||||||| Sbjct: 38496 ggttgaatgacaataaacag 38515
>gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, complete sequence Length = 181487 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggagcaattatgtgctaaca 152 |||||||||||||||||||| Sbjct: 39412 ggagcaattatgtgctaaca 39431
>gb|AE008903.1| Salmonella typhimurium LT2, section 207 of 220 of the complete genome Length = 20869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggttcaccagatttttca 381 |||||||||||||||||||| Sbjct: 19305 ctggttcaccagatttttca 19324
>emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 19/20 Length = 249050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggttcaccagatttttca 381 |||||||||||||||||||| Sbjct: 88937 ctggttcaccagatttttca 88956
>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173782 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gccaattgttgacaaattag 461 |||||||||||||||||||| Sbjct: 69817 gccaattgttgacaaattag 69798
>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence Length = 111010 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 aaagttcaattgcttcctcc 437 |||||||||||||||||||| Sbjct: 45861 aaagttcaattgcttcctcc 45842
>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence Length = 188261 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ttgcgacattttctcgattc 120 |||||||||||||||||||| Sbjct: 112670 ttgcgacattttctcgattc 112689
>gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, complete sequence Length = 40590 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 tcttgagtgtcactcgactg 535 |||||||||||||||||||| Sbjct: 36285 tcttgagtgtcactcgactg 36266
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggttcaccagatttttca 381 |||||||||||||||||||| Sbjct: 4334183 ctggttcaccagatttttca 4334202
>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone BACR48O03, complete sequence Length = 173781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gccaattgttgacaaattag 461 |||||||||||||||||||| Sbjct: 103965 gccaattgttgacaaattag 103984
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggttcaccagatttttca 381 |||||||||||||||||||| Sbjct: 4543839 ctggttcaccagatttttca 4543858
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gccaattgttgacaaattag 461 |||||||||||||||||||| Sbjct: 183170 gccaattgttgacaaattag 183189
>dbj|AP003100.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-27G22, complete sequence Length = 200276 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctgcccactcagctgggctg 178 |||||||||||||||||||| Sbjct: 143578 ctgcccactcagctgggctg 143559
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctggttcaccagatttttca 381 |||||||||||||||||||| Sbjct: 4519144 ctggttcaccagatttttca 4519163
>gb|AC005799.1|AC005799 Homo sapiens chromosome 17, clone hRPK.62_F_10, complete sequence Length = 154902 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ctcagctgggctgcatgagc 185 |||||||||||||||||||| Sbjct: 118189 ctcagctgggctgcatgagc 118208
>gb|AC116390.13| Mus musculus chromosome 15, clone RP23-78N1, complete sequence Length = 232133 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggagcaattatgtgctaaca 152 |||||||||||||||||||| Sbjct: 178439 ggagcaattatgtgctaaca 178458 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,621,786 Number of Sequences: 3902068 Number of extensions: 4621786 Number of successful extensions: 93441 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93303 Number of HSP's gapped (non-prelim): 133 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)