ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK072318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 258 2e-65
4emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 258 2e-65
5emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 258 2e-65
6dbj|AB094119.1| Cyanidioschyzon merolae Cmdnm2 gene for dynamin ... 54 5e-04
7gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, compl... 42 2.0
8emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 ... 42 2.0
9gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 7.9
10gb|AY077688.1| Drosophila melanogaster molybdenum cofactor synth... 40 7.9
11emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 i... 40 7.9
12gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, co... 40 7.9
13gb|AE008903.1| Salmonella typhimurium LT2, section 207 of 220 of... 40 7.9
14emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 7.9
15gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell... 40 7.9
16gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete se... 40 7.9
17gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, comp... 40 7.9
18gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, co... 40 7.9
19gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 7.9
20gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, r... 40 7.9
21gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 7.9
22gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39... 40 7.9
23dbj|AP003100.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
24gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 7.9
25gb|AC005799.1|AC005799 Homo sapiens chromosome 17, clone hRPK.62... 40 7.9
26gb|AC116390.13| Mus musculus chromosome 15, clone RP23-78N1, com... 40 7.9

>dbj|AK072318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029A13, full
            insert sequence
          Length = 2556

 Score =  422 bits (213), Expect = e-115
 Identities = 465/549 (84%)
 Strand = Plus / Plus

                                                                        
Query: 33   gtatggaagatttggagagcaccactcgttatgttacctggtcccttcataacaaaaacc 92
            ||||||| ||||||| |||||||||||||||||| || ||||||||||| || || ||||
Sbjct: 1759 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttcacaataagaacc 1818

                                                                        
Query: 93   gtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgctaaca 152
            ||||||||||| |||| ||  | ||||| ||||||||||  ||||||||||  |  ||||
Sbjct: 1819 gtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtgaaca 1878

                                                                        
Query: 153  cacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaataaac 212
            ||| ||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 1879 cacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaataagc 1938

                                                                        
Query: 213  aggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatcaggtg 272
            ||||||| |||||||||||  | ||||| ||| || |||||||  ||||| || |   ||
Sbjct: 1939 aggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcacccactg 1998

                                                                        
Query: 273  gtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaaggctgg 332
             ||  ||||| |  || || || ||||||||||||||||| || |||||| |||||||||
Sbjct: 1999 ttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaaggctgg 2058

                                                                        
Query: 333  cgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatcaaag 392
            | |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2059 caccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatcaaag 2118

                                                                        
Query: 393  agcattttcttgtcactacagaactaaagttcaattgcttcctcctgatgccaattgttg 452
            |||||||||||||||| ||||| || |||||||||||||| ||||| ||||| |||||||
Sbjct: 2119 agcattttcttgtcaccacagagcttaagttcaattgctttctcctcatgccgattgttg 2178

                                                                        
Query: 453  acaaattagcggctcttctacgtgaagaccttgaatcagcttttgaaaacgatcttgaca 512
            |||||||| |||| |||||| | ||||||||||||||||| || ||| | ||||||||||
Sbjct: 2179 acaaattaccggcgcttctaagagaagaccttgaatcagccttcgaagatgatcttgaca 2238

                                                                        
Query: 513  acatcttgagtgtcactcgactgcgccactcacttgggcagaagaagcgagtgctagaaa 572
             ||| ||   ||| ||||  |||||||| ||||||||||||| |||| |||  || || |
Sbjct: 2239 gcatatttgatgttactcagctgcgccattcacttgggcagaggaagagagatctggaga 2298

                     
Query: 573  tcgaattga 581
            |||||||||
Sbjct: 2299 tcgaattga 2307



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  258 bits (130), Expect = 2e-65
 Identities = 277/326 (84%)
 Strand = Plus / Minus

                                                                           
Query: 89      aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148
               ||||||||||||||| |||| ||  | ||||| ||||||||||  ||||||||||  |  
Sbjct: 3986756 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 3986697

                                                                           
Query: 149     aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208
               ||||||| ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||
Sbjct: 3986696 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 3986637

                                                                           
Query: 209     aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268
               || |||||||| |||||||||||  | ||||| ||| || |||||||  ||||| || | 
Sbjct: 3986636 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 3986577

                                                                           
Query: 269     ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328
                 || ||  ||||| |  || || || ||||||||||||||||| || |||||| |||||
Sbjct: 3986576 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 3986517

                                                                           
Query: 329     ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388
               ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3986516 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 3986457

                                         
Query: 389     aaagagcattttcttgtcactacaga 414
               |||||||||||||||||||| |||||
Sbjct: 3986456 aaagagcattttcttgtcaccacaga 3986431



 Score =  115 bits (58), Expect = 2e-22
 Identities = 136/162 (83%)
 Strand = Plus / Minus

                                                                           
Query: 420     agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479
               ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | ||||
Sbjct: 3986342 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 3986283

                                                                           
Query: 480     accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539
               ||||||||||||| || ||| | |||||||||| ||| ||   ||| ||||  |||||||
Sbjct: 3986282 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 3986223

                                                         
Query: 540     actcacttgggcagaagaagcgagtgctagaaatcgaattga 581
               | ||||||||||||| |||| |||  || || ||||||||||
Sbjct: 3986222 attcacttgggcagaggaagagagatctggagatcgaattga 3986181



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                
Query: 33      gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81
               ||||||| ||||||| |||||||||||||||||| || |||||||||||
Sbjct: 3986891 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 3986843



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  258 bits (130), Expect = 2e-65
 Identities = 277/326 (84%)
 Strand = Plus / Minus

                                                                           
Query: 89      aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148
               ||||||||||||||| |||| ||  | ||||| ||||||||||  ||||||||||  |  
Sbjct: 3986738 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 3986679

                                                                           
Query: 149     aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208
               ||||||| ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||
Sbjct: 3986678 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 3986619

                                                                           
Query: 209     aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268
               || |||||||| |||||||||||  | ||||| ||| || |||||||  ||||| || | 
Sbjct: 3986618 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 3986559

                                                                           
Query: 269     ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328
                 || ||  ||||| |  || || || ||||||||||||||||| || |||||| |||||
Sbjct: 3986558 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 3986499

                                                                           
Query: 329     ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388
               ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3986498 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 3986439

                                         
Query: 389     aaagagcattttcttgtcactacaga 414
               |||||||||||||||||||| |||||
Sbjct: 3986438 aaagagcattttcttgtcaccacaga 3986413



 Score =  115 bits (58), Expect = 2e-22
 Identities = 136/162 (83%)
 Strand = Plus / Minus

                                                                           
Query: 420     agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479
               ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | ||||
Sbjct: 3986324 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 3986265

                                                                           
Query: 480     accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539
               ||||||||||||| || ||| | |||||||||| ||| ||   ||| ||||  |||||||
Sbjct: 3986264 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 3986205

                                                         
Query: 540     actcacttgggcagaagaagcgagtgctagaaatcgaattga 581
               | ||||||||||||| |||| |||  || || ||||||||||
Sbjct: 3986204 attcacttgggcagaggaagagagatctggagatcgaattga 3986163



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                
Query: 33      gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81
               ||||||| ||||||| |||||||||||||||||| || |||||||||||
Sbjct: 3986873 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 3986825



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>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132682

 Score =  258 bits (130), Expect = 2e-65
 Identities = 277/326 (84%)
 Strand = Plus / Minus

                                                                         
Query: 89    aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148
             ||||||||||||||| |||| ||  | ||||| ||||||||||  ||||||||||  |  
Sbjct: 23172 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 23113

                                                                         
Query: 149   aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208
             ||||||| ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||
Sbjct: 23112 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 23053

                                                                         
Query: 209   aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268
             || |||||||| |||||||||||  | ||||| ||| || |||||||  ||||| || | 
Sbjct: 23052 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 22993

                                                                         
Query: 269   ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328
               || ||  ||||| |  || || || ||||||||||||||||| || |||||| |||||
Sbjct: 22992 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 22933

                                                                         
Query: 329   ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388
             ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 22932 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 22873

                                       
Query: 389   aaagagcattttcttgtcactacaga 414
             |||||||||||||||||||| |||||
Sbjct: 22872 aaagagcattttcttgtcaccacaga 22847



 Score =  115 bits (58), Expect = 2e-22
 Identities = 136/162 (83%)
 Strand = Plus / Minus

                                                                         
Query: 420   agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479
             ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | ||||
Sbjct: 22758 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 22699

                                                                         
Query: 480   accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539
             ||||||||||||| || ||| | |||||||||| ||| ||   ||| ||||  |||||||
Sbjct: 22698 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 22639

                                                       
Query: 540   actcacttgggcagaagaagcgagtgctagaaatcgaattga 581
             | ||||||||||||| |||| |||  || || ||||||||||
Sbjct: 22638 attcacttgggcagaggaagagagatctggagatcgaattga 22597



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 33    gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81
             ||||||| ||||||| |||||||||||||||||| || |||||||||||
Sbjct: 23307 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 23259



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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152090

 Score =  258 bits (130), Expect = 2e-65
 Identities = 277/326 (84%)
 Strand = Plus / Minus

                                                                          
Query: 89     aaccgtgccggattgcgacattttctcgattcgtttgttgcaccggagcaattatgtgct 148
              ||||||||||||||| |||| ||  | ||||| ||||||||||  ||||||||||  |  
Sbjct: 148732 aaccgtgccggattgagacacttctttgattcctttgttgcacaagagcaattatccgtg 148673

                                                                          
Query: 149    aacacacatactgcccactcagctgggctgcatgagcaatcctctgggttgaatgacaat 208
              ||||||| ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||
Sbjct: 148672 aacacacttactgcccactcgactgggctgcatgagcaatcctttggcttgaatgacaat 148613

                                                                          
Query: 209    aaacaggatagaccaaagggagagctgaaatctagtcatccttcagactcaaatccatca 268
              || |||||||| |||||||||||  | ||||| ||| || |||||||  ||||| || | 
Sbjct: 148612 aagcaggataggccaaagggagacttcaaatcaagtaattcttcagaagcaaattcaccc 148553

                                                                          
Query: 269    ggtggtgtgtcagaaatgagactggtggatctcttggacagcacgctctggaaccgaagg 328
                || ||  ||||| |  || || || ||||||||||||||||| || |||||| |||||
Sbjct: 148552 actgttgcatcagagactaggcttgttgatctcttggacagcacactatggaacagaagg 148493

                                                                          
Query: 329    ctggcgccctcatctgagcgacttgtgtatgcactggttcaccagatttttcatgggatc 388
              ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 148492 ctggcaccctcatctgaaagacttgtgtatgcactggttcaccagattttccatgggatc 148433

                                        
Query: 389    aaagagcattttcttgtcactacaga 414
              |||||||||||||||||||| |||||
Sbjct: 148432 aaagagcattttcttgtcaccacaga 148407



 Score =  115 bits (58), Expect = 2e-22
 Identities = 136/162 (83%)
 Strand = Plus / Minus

                                                                          
Query: 420    agttcaattgcttcctcctgatgccaattgttgacaaattagcggctcttctacgtgaag 479
              ||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | ||||
Sbjct: 148318 agttcaattgctttctcctcatgccgattgttgacaaattaccggcgcttctaagagaag 148259

                                                                          
Query: 480    accttgaatcagcttttgaaaacgatcttgacaacatcttgagtgtcactcgactgcgcc 539
              ||||||||||||| || ||| | |||||||||| ||| ||   ||| ||||  |||||||
Sbjct: 148258 accttgaatcagccttcgaagatgatcttgacagcatatttgatgttactcagctgcgcc 148199

                                                        
Query: 540    actcacttgggcagaagaagcgagtgctagaaatcgaattga 581
              | ||||||||||||| |||| |||  || || ||||||||||
Sbjct: 148198 attcacttgggcagaggaagagagatctggagatcgaattga 148157



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 33     gtatggaagatttggagagcaccactcgttatgttacctggtcccttca 81
              ||||||| ||||||| |||||||||||||||||| || |||||||||||
Sbjct: 148867 gtatggaggatttggtgagcaccactcgttatgtcacttggtcccttca 148819



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>dbj|AB094119.1| Cyanidioschyzon merolae Cmdnm2 gene for dynamin related protein
            involved in chloroplast division, complete cds
          Length = 2889

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 412  agaactaaagttcaattgcttcctcctgatgccaattgt 450
            |||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 2478 agaactcaagttcaattgcttcttcctgatgccagttgt 2516



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>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence
          Length = 203549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 389    aaagagcattttcttgtcactacag 413
              ||||||||||||| |||||||||||
Sbjct: 160033 aaagagcattttcatgtcactacag 160057



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>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5,
              complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 235    gaaatctagtcatccttcaga 255
              |||||||||||||||||||||
Sbjct: 163891 gaaatctagtcatccttcaga 163871



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 529     tcgactgcgccactcacttgggca 552
               ||||||||||||| ||||||||||
Sbjct: 1206855 tcgactgcgccacccacttgggca 1206832



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>gb|AY077688.1| Drosophila melanogaster molybdenum cofactor synthesis/low xanthine
            dehydrogenase (lxd) gene, partial cds
          Length = 3780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  gccaattgttgacaaattag 461
            ||||||||||||||||||||
Sbjct: 1595 gccaattgttgacaaattag 1614



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>emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 in linkage group 20,
             complete sequence
          Length = 175626

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ggttgaatgacaataaacag 214
             ||||||||||||||||||||
Sbjct: 38496 ggttgaatgacaataaacag 38515



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>gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, complete sequence
          Length = 181487

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ggagcaattatgtgctaaca 152
             ||||||||||||||||||||
Sbjct: 39412 ggagcaattatgtgctaaca 39431



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>gb|AE008903.1| Salmonella typhimurium LT2, section 207 of 220 of the complete genome
          Length = 20869

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ctggttcaccagatttttca 381
             ||||||||||||||||||||
Sbjct: 19305 ctggttcaccagatttttca 19324



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>emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 19/20
          Length = 249050

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ctggttcaccagatttttca 381
             ||||||||||||||||||||
Sbjct: 88937 ctggttcaccagatttttca 88956



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>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 173782

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   gccaattgttgacaaattag 461
             ||||||||||||||||||||
Sbjct: 69817 gccaattgttgacaaattag 69798



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>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence
          Length = 111010

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   aaagttcaattgcttcctcc 437
             ||||||||||||||||||||
Sbjct: 45861 aaagttcaattgcttcctcc 45842



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>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence
          Length = 188261

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    ttgcgacattttctcgattc 120
              ||||||||||||||||||||
Sbjct: 112670 ttgcgacattttctcgattc 112689



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>gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, complete sequence
          Length = 40590

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   tcttgagtgtcactcgactg 535
             ||||||||||||||||||||
Sbjct: 36285 tcttgagtgtcactcgactg 36266



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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ctggttcaccagatttttca 381
               ||||||||||||||||||||
Sbjct: 4334183 ctggttcaccagatttttca 4334202



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>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone
              BACR48O03, complete sequence
          Length = 173781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    gccaattgttgacaaattag 461
              ||||||||||||||||||||
Sbjct: 103965 gccaattgttgacaaattag 103984



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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ctggttcaccagatttttca 381
               ||||||||||||||||||||
Sbjct: 4543839 ctggttcaccagatttttca 4543858



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>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete
              sequence
          Length = 281589

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    gccaattgttgacaaattag 461
              ||||||||||||||||||||
Sbjct: 183170 gccaattgttgacaaattag 183189



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>dbj|AP003100.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-27G22, complete
              sequence
          Length = 200276

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ctgcccactcagctgggctg 178
              ||||||||||||||||||||
Sbjct: 143578 ctgcccactcagctgggctg 143559



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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ctggttcaccagatttttca 381
               ||||||||||||||||||||
Sbjct: 4519144 ctggttcaccagatttttca 4519163



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>gb|AC005799.1|AC005799 Homo sapiens chromosome 17, clone hRPK.62_F_10, complete sequence
          Length = 154902

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ctcagctgggctgcatgagc 185
              ||||||||||||||||||||
Sbjct: 118189 ctcagctgggctgcatgagc 118208



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>gb|AC116390.13| Mus musculus chromosome 15, clone RP23-78N1, complete sequence
          Length = 232133

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ggagcaattatgtgctaaca 152
              ||||||||||||||||||||
Sbjct: 178439 ggagcaattatgtgctaaca 178458


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,621,786
Number of Sequences: 3902068
Number of extensions: 4621786
Number of successful extensions: 93441
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93303
Number of HSP's gapped (non-prelim): 133
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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