ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17c18 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 123 bits (309), Expect = 1e-28 Identities = 61/88 (69%), Positives = 65/88 (73%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 IVDFIKFD I NREKH G+ ETIHVED+ GHQFATR+GNVFTI Sbjct: 169 IVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTI 228 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKRD 288 GKG KPWVSLPKGKGIKL+IIEEQRKRD Sbjct: 229 GKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 120 bits (301), Expect = 1e-27 Identities = 60/95 (63%), Positives = 69/95 (72%) Frame = +1 Query: 1 LDLVAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFAT 180 LDL + IVDFIKFD I NREKH G+ ET+H++D+QGH+FAT Sbjct: 162 LDLES-NKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFAT 220 Query: 181 RLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 RLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+ RKR Sbjct: 221 RLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKR 255
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 118 bits (296), Expect = 5e-27 Identities = 58/87 (66%), Positives = 63/87 (72%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NREKH G+ ETIHV+DA GH+FATRLGNVFTI Sbjct: 165 ITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTI 224 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKGTKPWVSLPKGKGIKLTI+EE +KR Sbjct: 225 GKGTKPWVSLPKGKGIKLTILEEAKKR 251
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 117 bits (294), Expect = 8e-27 Identities = 62/95 (65%), Positives = 67/95 (70%) Frame = +1 Query: 1 LDLVAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFAT 180 LDL + IVDFIKFD I NREKH G+ ETIHV+DA GH+FAT Sbjct: 162 LDLES-NKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFAT 220 Query: 181 RLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 RLGNVFTIGKGTKPWVSLPK KGIKL+IIEE RKR Sbjct: 221 RLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 117 bits (294), Expect = 8e-27 Identities = 57/87 (65%), Positives = 64/87 (73%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 IV+FIKFD I NREKH G+ ETIH++D+ GH+FATRLGNV+TI Sbjct: 169 IVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTI 228 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKGTKPWVSLPKGKGIKLTIIEE RKR Sbjct: 229 GKGTKPWVSLPKGKGIKLTIIEEARKR 255
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 100 bits (250), Expect = 1e-21 Identities = 47/87 (54%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NREKH G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 100 bits (250), Expect = 1e-21 Identities = 47/87 (54%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NREKH G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 99.8 bits (247), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 92.0 bits (227), Expect(2) = 3e-21 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = +1 Query: 127 GTXETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 270 G+ ETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE Sbjct: 206 GSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253 Score = 28.1 bits (61), Expect(2) = 3e-21 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +3 Query: 33 LHQV*RRQRXHGDWWAQHWACXCDQXQGEA 122 LHQ HGDW ++ A CDQ QGEA Sbjct: 176 LHQGLMLAMCHGDW-RRNTAVWCDQQQGEA 204
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 97.4 bits (241), Expect = 1e-20 Identities = 45/92 (48%), Positives = 60/92 (65%) Frame = +1 Query: 10 VAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLG 189 +A I D+IKFD + NRE+H G+ + +H++D+QGH FATRL Sbjct: 164 IASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLT 223 Query: 190 NVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 NVF IGKG KP++SLPKGKG+KL+I EE+ KR Sbjct: 224 NVFIIGKGNKPYISLPKGKGVKLSIAEERDKR 255
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 97.1 bits (240), Expect = 1e-20 Identities = 45/87 (51%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I DFIKF+ I NREKH G+ + +HV+D+ G+ FATRL N+F I Sbjct: 168 ITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG KPWVSLP+GKG++LTI EE+ KR Sbjct: 228 GKGNKPWVSLPRGKGVRLTIAEERDKR 254
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 96.3 bits (238), Expect = 2e-20 Identities = 43/87 (49%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I++FIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 95.9 bits (237), Expect = 3e-20 Identities = 43/87 (49%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I++FIKFD I NRE+H G+ + +HV+DA G+ FATR+ N+F I Sbjct: 168 IINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 95.5 bits (236), Expect = 4e-20 Identities = 42/87 (48%), Positives = 57/87 (65%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I++FIKFD I NRE+H G+ + +HV+DA G+ FATR+ N+F I Sbjct: 168 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 94.4 bits (233), Expect = 9e-20 Identities = 43/87 (49%), Positives = 55/87 (63%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD I NRE+H G+ + +HV+DA G+ FATR+ N+F I Sbjct: 168 ITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 94.4 bits (233), Expect = 9e-20 Identities = 43/87 (49%), Positives = 55/87 (63%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD I NRE+H G+ + +HV+DA G+ FATR+ N+F I Sbjct: 168 ITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 94.0 bits (232), Expect = 1e-19 Identities = 42/87 (48%), Positives = 56/87 (64%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I++FIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 94.0 bits (232), Expect = 1e-19 Identities = 42/87 (48%), Positives = 56/87 (64%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I++FIKFD I NRE+H G+ + +HV+DA G+ FATRL N+F I Sbjct: 168 IINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 93.6 bits (231), Expect = 2e-19 Identities = 42/87 (48%), Positives = 55/87 (63%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD + NRE+H G+ + +HV+DA G+ FATR+ N+F I Sbjct: 168 ITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 228 GNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 93.2 bits (230), Expect = 2e-19 Identities = 43/87 (49%), Positives = 56/87 (64%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I +FIKFD I NRE+H G+ + +HV+D+ G+ FATRL N+F I Sbjct: 168 ITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVI 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 GKG K WVS+P+GKGI+LTI EE+ KR Sbjct: 228 GKGNKAWVSIPRGKGIRLTIAEERDKR 254
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 84.7 bits (208), Expect = 8e-17 Identities = 42/87 (48%), Positives = 52/87 (59%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD I +RE H G+ E IHV+DA +FATRL NVF I Sbjct: 169 IESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVI 228 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 229 GEAGKSWISLPKGKGVKLSITEERDRR 255
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 84.0 bits (206), Expect = 1e-16 Identities = 42/87 (48%), Positives = 52/87 (59%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD I +RE H G+ E IHV+DA +FATRL NVF I Sbjct: 169 IESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVI 228 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 229 GETGKSWISLPKGKGVKLSITEERDRR 255
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 84.0 bits (206), Expect = 1e-16 Identities = 42/87 (48%), Positives = 52/87 (59%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FIKFD I +RE H G+ E IHV+DA +FATRL NVF I Sbjct: 169 IESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVI 228 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQRKR 285 G+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 229 GETGKSWISLPKGKGVKLSITEERDRR 255
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 80.5 bits (197), Expect = 1e-15 Identities = 39/92 (42%), Positives = 55/92 (59%) Frame = +1 Query: 10 VAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLG 189 +A I DFIKFD I ++E+H G + +H++D+ + F TRL Sbjct: 163 LASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLN 222 Query: 190 NVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 NVF IG+ KP++SLPKGKGIKL+I EE+ +R Sbjct: 223 NVFVIGEQGKPYISLPKGKGIKLSIAEERDRR 254
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 78.6 bits (192), Expect = 5e-15 Identities = 39/92 (42%), Positives = 53/92 (57%) Frame = +1 Query: 10 VAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLG 189 +A I F+KF+ I +RE+H G + +H++DA +QF TRL Sbjct: 164 LATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLT 223 Query: 190 NVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 NVF IG+G K +SLPKGKGIKL+I EE+ R Sbjct: 224 NVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 76.3 bits (186), Expect = 3e-14 Identities = 38/92 (41%), Positives = 52/92 (56%) Frame = +1 Query: 10 VAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLG 189 ++ I D +KF+ I +RE+ G + IH++D+ GH FATR+ Sbjct: 163 ISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRIS 222 Query: 190 NVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 285 NVF IGKG K VSLP G GI+L+I EE+ KR Sbjct: 223 NVFVIGKGNKALVSLPTGAGIRLSIAEERDKR 254
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 75.9 bits (185), Expect = 3e-14 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Frame = +1 Query: 10 VAPTSIVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLG 189 +A I FIKFD I +REK G + +H++DA + F TRL Sbjct: 164 LATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLS 223 Query: 190 NVFTIG-KGTKPWVSLPKGKGIKLTIIEEQRKR 285 NVF IG + KPWVSLPKGKGIKL+I EE+ +R Sbjct: 224 NVFVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 71.6 bits (174), Expect = 7e-13 Identities = 34/84 (40%), Positives = 49/84 (58%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDAQGHQFATRLGNVFTI 204 I FI F+ + +REKH G+ + +HV D GHQFATRL NVF I Sbjct: 168 ITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFII 227 Query: 205 GKGTKPWVSLPKGKGIKLTIIEEQ 276 GK ++ +VSLP GKG++ + ++E+ Sbjct: 228 GKASQTFVSLPAGKGVRRSRVDER 251
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 36.6 bits (83), Expect = 0.023 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDA 159 I DFIKFD I NRE+H G+ + +HV+DA Sbjct: 150 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 36.6 bits (83), Expect = 0.023 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 25 IVDFIKFDXXXXXXXXXXXXXXXXXXIXNREKHXGTXETIHVEDA 159 I DFIKFD I NRE+H G+ + +HV+DA Sbjct: 150 ITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 31.2 bits (69), Expect = 0.99 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +1 Query: 103 IXNREKHXGTXETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 243 + R++H G ++I+ D GH+F G+VF + KP +S +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2386 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 331 QCLRIRPWQQPELRHPSSSAPQ*W*A*YPCPWXGSPKAWCP-CQW*TRCPDGWQTGDPG 158 +C R+R + RHP + P G +A P C+W T CP+G G G Sbjct: 1465 ECRRLRTCSECLARHPRTLQP------------GDGEASTPRCKWCTNCPEGACIGRNG 1511
>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2330 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 331 QCLRIRPWQQPELRHPSSSAPQ*W*A*YPCPWXGSPKAWCP-CQW*TRCPDGWQTGDPG 158 +C R+R + RHP + P G +A P C+W T CP+G G G Sbjct: 1409 ECRRLRTCSECLARHPRTLQP------------GDGEASIPRCKWCTNCPEGACIGRNG 1455 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,571,927 Number of Sequences: 219361 Number of extensions: 1000469 Number of successful extensions: 2674 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2586 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2670 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
