ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234453.1|HVU234453 Hordeum vulgare partial mRNA; clone cMW... 432 e-118
2gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 426 e-116
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 426 e-116
4ref|NM_115640.1| Arabidopsis thaliana polygalacturonase AT3G5779... 62 2e-06
5emb|BX822489.1|CNS0A75A Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
6emb|BX824951.1|CNS0A6WY Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
7emb|BX824455.1|CNS0A6UY Arabidopsis thaliana Full-length cDNA Co... 48 0.033
8gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 2.1
9emb|AL592217.6| Human DNA sequence from clone RP11-621E22 on chr... 42 2.1
10gb|BC036249.1| Homo sapiens cDNA clone IMAGE:5267015 42 2.1
11gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complet... 42 2.1
12ref|NM_100304.3| Arabidopsis thaliana unknown protein AT1G04230 ... 40 8.2
13gb|AC162281.3| Mus musculus chromosome 1, clone RP24-398O5, comp... 40 8.2
14gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete se... 40 8.2
15gb|BT008818.1| Arabidopsis thaliana At1g04230 mRNA, complete cds 40 8.2
16ref|XM_965890.1| PREDICTED: Tribolium castaneum similar to Ran-s... 40 8.2
17gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosom... 40 8.2
18gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome... 40 8.2
19dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 8.2
20gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, comple... 40 8.2
21dbj|AK221777.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 8.2
22gb|AF370483.1|AF370483 Arabidopsis thaliana Unknown protein mRNA... 40 8.2
23emb|BX814191.1|CNS0AC5I Arabidopsis thaliana Full-length cDNA Co... 40 8.2
24gb|AC110768.5| Homo sapiens BAC clone RP11-136I13 from 4, comple... 40 8.2
25gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell... 40 8.2
26gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-6... 40 8.2
27gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis tha... 40 8.2 
>emb|AJ234453.1|HVU234453 Hordeum vulgare partial mRNA; clone cMWG0784
          Length = 473

 Score =  432 bits (218), Expect = e-118
 Identities = 225/226 (99%), Gaps = 1/226 (0%)
 Strand = Plus / Minus

                                                                       
Query: 374 ggtggacaaattacactgggggcctgtatgactacaggcctgggtgccaggagatggtaa 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggtggacaaattacactgggggcctgtatgactacaggcctgggtgccaggagatggtaa 413

                                                                       
Query: 434 agcacaggactggcggtatgatgctggagcacatctcaggcctggaggttgacaatgtca 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agcacaggactggcggtatgatgctggagcacatctcaggcctggaggttgacaatgtca 353

                                                                       
Query: 494 gtatgagatggtcgagaggaagcctgaaagggtgggatgttaacccgctcctcttccggc 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtatgagatggtcgagaggaagcctgaaagggtgggatgttaacccgctcctcttccggc 293

                                                         
Query: 554 catccactatcgacgggcttgtcgttccacgattggcaatcgctgg 599
           |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 292 catccactatcgacgggc-tgtcgttccacgattggcaatcgctgg 248
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>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0066E19, complete sequence
          Length = 145575

 Score =  426 bits (215), Expect = e-116
 Identities = 396/455 (87%), Gaps = 1/455 (0%)
 Strand = Plus / Minus

                                                                         
Query: 145   tcaaacatcaaaatgcgcactaggtactaccatccttcatggtgggggagagctgaaccg 204
             ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 30828 tcaaacatcaaaatgagcaccaggtactaccatcctttatggtgggggagagctgaaccg 30769

                                                                         
Query: 205   atctacatcactacctgtccaaggcaccctgattccagagaaggcaccatttcagatgtt 264
             ||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||  ||
Sbjct: 30768 atctacatcaccacatgtccaaggcacccagattccaaagaaggcaccatttcagacatt 30709

                                                                         
Query: 265   cgtttcatcaacatctcgtcagtatcagaaaacggtgttttcctggctggatcgaagcac 324
             |  |||||||||||||| || |||||||||||||| || ||| |||||||||||||||||
Sbjct: 30708 cagttcatcaacatctcatcggtatcagaaaacggagtattcttggctggatcgaagcac 30649

                                                                         
Query: 325   ggcttgcttcgcaacttgaagttccagaatgttgacctgacctacaagaggtggacaaat 384
             ||  ||||||||||| |||||||| ||||||| ||||| ||||||||||| |||||||| 
Sbjct: 30648 gggctgcttcgcaacctgaagttcaagaatgtcgacctaacctacaagagatggacaaac 30589

                                                                         
Query: 385   tacactgggggcctgtatgactacaggcctgggtgccaggagatggtaaagcacaggact 444
             ||| | || || |||||||| ||||||||||| |||||  ||||||| |||||| | || 
Sbjct: 30588 tactcgggagggctgtatgattacaggcctggatgccaaaagatggtgaagcaccgaacc 30529

                                                                         
Query: 445   ggcggtatgatgctggagcacatctcaggcctggaggttgacaatgtcagtatgagatgg 504
             || ||||||||||||||||||||||| ||||| ||| | |||||||| || |||||||||
Sbjct: 30528 ggtggtatgatgctggagcacatctctggccttgagatcgacaatgtgaggatgagatgg 30469

                                                                         
Query: 505   tcgagaggaagcctgaaagggtgggatgttaacccgctcctcttccggccatccactatc 564
             || ||||||||||| ||||| ||||||||| | || |||||||||| |||||| ||  ||
Sbjct: 30468 tcaagaggaagcctcaaaggctgggatgttgatcctctcctcttccagccatcgacagtc 30409

                                                
Query: 565   gacgggcttgtcgttccacgattggcaatcgctgg 599
             |||  || |||| ||||| || |||||||||||||
Sbjct: 30408 gacaagc-tgtcattccatgactggcaatcgctgg 30375



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctaaatnatgcgctatcaaatttggaagtgcaagctttttcaactttgagaagatgctct 61
             ||||||  ||||||||||| ||||| || || ||||| ||  ||||  ||||| || | |
Sbjct: 31325 ctaaatcttgcgctatcaagtttggcagcgctagcttctttgacttcaagaagctggtat 31266

                                                              
Query: 62    ttgacaacattactatagttgattcacatcgaggacttggaatgcagat 110
             ||||||||||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 31265 ttgacaacattacaatagttgattcacatagaggacttgggatgcagat 31217
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  426 bits (215), Expect = e-116
 Identities = 396/455 (87%), Gaps = 1/455 (0%)
 Strand = Plus / Minus

                                                                            
Query: 145      tcaaacatcaaaatgcgcactaggtactaccatccttcatggtgggggagagctgaaccg 204
                ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 18632952 tcaaacatcaaaatgagcaccaggtactaccatcctttatggtgggggagagctgaaccg 18632893

                                                                            
Query: 205      atctacatcactacctgtccaaggcaccctgattccagagaaggcaccatttcagatgtt 264
                ||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||  ||
Sbjct: 18632892 atctacatcaccacatgtccaaggcacccagattccaaagaaggcaccatttcagacatt 18632833

                                                                            
Query: 265      cgtttcatcaacatctcgtcagtatcagaaaacggtgttttcctggctggatcgaagcac 324
                |  |||||||||||||| || |||||||||||||| || ||| |||||||||||||||||
Sbjct: 18632832 cagttcatcaacatctcatcggtatcagaaaacggagtattcttggctggatcgaagcac 18632773

                                                                            
Query: 325      ggcttgcttcgcaacttgaagttccagaatgttgacctgacctacaagaggtggacaaat 384
                ||  ||||||||||| |||||||| ||||||| ||||| ||||||||||| |||||||| 
Sbjct: 18632772 gggctgcttcgcaacctgaagttcaagaatgtcgacctaacctacaagagatggacaaac 18632713

                                                                            
Query: 385      tacactgggggcctgtatgactacaggcctgggtgccaggagatggtaaagcacaggact 444
                ||| | || || |||||||| ||||||||||| |||||  ||||||| |||||| | || 
Sbjct: 18632712 tactcgggagggctgtatgattacaggcctggatgccaaaagatggtgaagcaccgaacc 18632653

                                                                            
Query: 445      ggcggtatgatgctggagcacatctcaggcctggaggttgacaatgtcagtatgagatgg 504
                || ||||||||||||||||||||||| ||||| ||| | |||||||| || |||||||||
Sbjct: 18632652 ggtggtatgatgctggagcacatctctggccttgagatcgacaatgtgaggatgagatgg 18632593

                                                                            
Query: 505      tcgagaggaagcctgaaagggtgggatgttaacccgctcctcttccggccatccactatc 564
                || ||||||||||| ||||| ||||||||| | || |||||||||| |||||| ||  ||
Sbjct: 18632592 tcaagaggaagcctcaaaggctgggatgttgatcctctcctcttccagccatcgacagtc 18632533

                                                   
Query: 565      gacgggcttgtcgttccacgattggcaatcgctgg 599
                |||  || |||| ||||| || |||||||||||||
Sbjct: 18632532 gacaagc-tgtcattccatgactggcaatcgctgg 18632499



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctaaatnatgcgctatcaaatttggaagtgcaagctttttcaactttgagaagatgctct 61
                ||||||  ||||||||||| ||||| || || ||||| ||  ||||  ||||| || | |
Sbjct: 18633449 ctaaatcttgcgctatcaagtttggcagcgctagcttctttgacttcaagaagctggtat 18633390

                                                                 
Query: 62       ttgacaacattactatagttgattcacatcgaggacttggaatgcagat 110
                ||||||||||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 18633389 ttgacaacattacaatagttgattcacatagaggacttgggatgcagat 18633341
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>ref|NM_115640.1| Arabidopsis thaliana polygalacturonase AT3G57790 mRNA, complete cds
          Length = 1473

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 121/151 (80%)
 Strand = Plus / Plus

                                                                        
Query: 59   tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatccgtgatg 118
            ||||||| ||||| |||||  |||| || ||  |||||||||| ||||| || || ||||
Sbjct: 863  tctttgataacatcactatttttgaatctcacagaggacttggcatgcaaatacgcgatg 922

                                                                        
Query: 119  gagggaacgttagtgatgtgatattttcaaacatcaaaatgcgcactaggtactaccatc 178
            |||| || || ||||| || | |||||||||||| || ||  | || || |||||| |||
Sbjct: 923  gaggaaatgtgagtgacgttacattttcaaacataaacattagtacaagatactacgatc 982

                                           
Query: 179  cttcatggtgggggagagctgaaccgatcta 209
            |||| |||||||| ||||| ||||| |||||
Sbjct: 983  cttcttggtggggaagagcagaaccaatcta 1013
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>emb|BX822489.1|CNS0A75A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZF11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 121/151 (80%)
 Strand = Plus / Plus

                                                                       
Query: 59  tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatccgtgatg 118
           ||||||| ||||| |||||  |||| || ||  |||||||||| ||||| || || ||||
Sbjct: 794 tctttgataacatcactatttttgaatctcacagaggacttggcatgcaaatacgcgatg 853

                                                                       
Query: 119 gagggaacgttagtgatgtgatattttcaaacatcaaaatgcgcactaggtactaccatc 178
           |||| || || ||||| || | |||||||||||| || ||  | || || |||||| |||
Sbjct: 854 gaggaaatgtgagtgacgttacattttcaaacataaacattagtacaagatactacgatc 913

                                          
Query: 179 cttcatggtgggggagagctgaaccgatcta 209
           |||| |||||||| ||||| ||||| |||||
Sbjct: 914 cttcttggtggggaagagcagaaccaatcta 944
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>emb|BX824951.1|CNS0A6WY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH85ZC07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1462

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 121/151 (80%)
 Strand = Plus / Plus

                                                                        
Query: 59   tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatccgtgatg 118
            ||||||| ||||| |||||  |||| || ||  |||||||||| ||||| || || ||||
Sbjct: 870  tctttgataacatcactatttttgaatctcacagaggacttggcatgcaaatacgcgatg 929

                                                                        
Query: 119  gagggaacgttagtgatgtgatattttcaaacatcaaaatgcgcactaggtactaccatc 178
            |||| || || ||||| || | |||||||||||| || ||  | || || |||||| |||
Sbjct: 930  gaggaaatgtgagtgacgttacattttcaaacataaacattagtacaagatactacgatc 989

                                           
Query: 179  cttcatggtgggggagagctgaaccgatcta 209
            |||| |||||||| ||||| ||||| |||||
Sbjct: 990  cttcttggtggggaagagcagaaccaatcta 1020
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>emb|BX824455.1|CNS0A6UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH4ZE06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1390

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 121/152 (79%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                       
Query: 59  tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatc-cgtgat 117
           ||||||| ||||| |||||  |||| || ||  |||||||||| ||||| ||  || |||
Sbjct: 803 tctttgataacatcactatttttgaatctcacagaggacttggcatgcaaatagcgcgat 862

                                                                       
Query: 118 ggagggaacgttagtgatgtgatattttcaaacatcaaaatgcgcactaggtactaccat 177
           ||||| || || ||||| || | |||||||||||| || ||  | || || |||||| ||
Sbjct: 863 ggaggaaatgtgagtgacgttacattttcaaacataaacattagtacaagatactacgat 922

                                           
Query: 178 ccttcatggtgggggagagctgaaccgatcta 209
           ||||| |||||||| ||||| ||||| |||||
Sbjct: 923 ccttcttggtggggaagagcagaaccaatcta 954
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    gattcacatcgaggacttgga 102
             |||||||||||||||||||||
Sbjct: 93134 gattcacatcgaggacttgga 93114
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>emb|AL592217.6| Human DNA sequence from clone RP11-621E22 on chromosome 6, complete
             sequence
          Length = 72060

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   catccttcatggtgggggaga 195
             |||||||||||||||||||||
Sbjct: 20897 catccttcatggtgggggaga 20877
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>gb|BC036249.1| Homo sapiens cDNA clone IMAGE:5267015
          Length = 1349

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 179  cttcatggtgggggagagctg 199
            |||||||||||||||||||||
Sbjct: 1227 cttcatggtgggggagagctg 1207
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>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence
          Length = 200594

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 179    cttcatggtgggggagagctg 199
              |||||||||||||||||||||
Sbjct: 154884 cttcatggtgggggagagctg 154904
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>ref|NM_100304.3| Arabidopsis thaliana unknown protein AT1G04230 mRNA, complete cds
          Length = 1322

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 catcaacatctcgtcagtat 289
           ||||||||||||||||||||
Sbjct: 786 catcaacatctcgtcagtat 805
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>gb|AC162281.3| Mus musculus chromosome 1, clone RP24-398O5, complete sequence
          Length = 162097

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   aacttgaagttccagaatgt 356
             ||||||||||||||||||||
Sbjct: 66806 aacttgaagttccagaatgt 66787
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>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence
          Length = 120527

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                          
Query: 59     tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatccgtgatg 118
              |||||||||| || || || |||||||| ||| |||| |||| | | ||||| |||||||
Sbjct: 101156 tctttgacaatatcaccattgttgattctcatagagggcttgcattccagattcgtgatg 101215

                  
Query: 119    gagg 122
              ||||
Sbjct: 101216 gagg 101219
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>gb|BT008818.1| Arabidopsis thaliana At1g04230 mRNA, complete cds
          Length = 978

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 catcaacatctcgtcagtat 289
           ||||||||||||||||||||
Sbjct: 782 catcaacatctcgtcagtat 801
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>ref|XM_965890.1| PREDICTED: Tribolium castaneum similar to Ran-specific
           GTPase-activating protein (Ran binding protein 1)
           (RanBP1) (LOC659598), mRNA
          Length = 504

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  cgctatcaaatttggaagtg 31
           ||||||||||||||||||||
Sbjct: 465 cgctatcaaatttggaagtg 484
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>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence
          Length = 222313

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    gagaggaagcctgaaagggt 526
              ||||||||||||||||||||
Sbjct: 143026 gagaggaagcctgaaagggt 143007
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>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence
          Length = 255667

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    atattttcaaacatcaaaat 158
              ||||||||||||||||||||
Sbjct: 179563 atattttcaaacatcaaaat 179544
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 369     caagaggtggacaaattaca 388
               ||||||||||||||||||||
Sbjct: 1429823 caagaggtggacaaattaca 1429842
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>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence
          Length = 203583

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   acgttagtgatgtgatattt 144
             ||||||||||||||||||||
Sbjct: 28676 acgttagtgatgtgatattt 28657
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>dbj|AK221777.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL21-70-P12
          Length = 997

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 catcaacatctcgtcagtat 289
           ||||||||||||||||||||
Sbjct: 459 catcaacatctcgtcagtat 478
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>gb|AF370483.1|AF370483 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1323

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 catcaacatctcgtcagtat 289
           ||||||||||||||||||||
Sbjct: 786 catcaacatctcgtcagtat 805
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>emb|BX814191.1|CNS0AC5I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1265

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 catcaacatctcgtcagtat 289
           ||||||||||||||||||||
Sbjct: 778 catcaacatctcgtcagtat 797
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>gb|AC110768.5| Homo sapiens BAC clone RP11-136I13 from 4, complete sequence
          Length = 129711

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   cacatctcaggcctggaggt 482
             ||||||||||||||||||||
Sbjct: 22031 cacatctcaggcctggaggt 22050
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>gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169416

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   tcagatgttcgtttcatcaa 275
             ||||||||||||||||||||
Sbjct: 37789 tcagatgttcgtttcatcaa 37770
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>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence
          Length = 100208

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 59    tctttgacaacattactatagttgattcacatcgaggacttggaatgcagatccgtgatg 118
             |||||||||| || || || |||||||| ||| |||| |||| | | ||||| |||||||
Sbjct: 52321 tctttgacaatatcaccattgttgattctcatagagggcttgcattccagattcgtgatg 52262

                 
Query: 119   gagg 122
             ||||
Sbjct: 52261 gagg 52258
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>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
              sequence
          Length = 107527

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    catcaacatctcgtcagtat 289
              ||||||||||||||||||||
Sbjct: 105721 catcaacatctcgtcagtat 105702


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,689,278
Number of Sequences: 3902068
Number of extensions: 4689278
Number of successful extensions: 88404
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88313
Number of HSP's gapped (non-prelim): 90
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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