ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16n06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 Score = 880 bits (444), Expect = 0.0 Identities = 511/532 (96%), Gaps = 1/532 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 829 aaagccccaagtttcggtgag-cggcggaaggctgtccttcaggatattgccattgtgac 887 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 888 aggtgctgaatacctggcgaaggatcttggtctgttggttgagaatgcaacagtagacca 947 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 948 acttgggacagcaaggaaaatcacaatccatcagactacaacaaccctcatagcagatgc 1007 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1008 ggctagcaaagacgagatccaggccagggttgcacagctaaagaaggagctttctgaaac 1067 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 ||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1068 tgattccatctatgactcagagaaattggctgagaggattgccaagctttctggcggtgt 1127 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 1128 ggccgtcatcaaggttggagcaacaaccgagacagagctcgaagaccgtcagcttcggat 1187 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1188 cgaggacgcgaagaatgccactttcgcagccatcgaggagggcattgttcccggtggtgg 1247 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1248 cgcggcgtatgtgcacctgtctacctatgtccctgcgatcaaagaaacaatcgaagacca 1307 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggcattgcaagcaccggca 533 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1308 cgacgagcgccttggtgctgacatcattcagaaggcattgcaagcaccggca 1359
>dbj|AK119223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D06, full insert sequence Length = 1119 Score = 468 bits (236), Expect = e-129 Identities = 447/516 (86%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 90 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 148 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||| ||||||| ||||| || || || ||| || ||||||||||||| || | ||| || Sbjct: 149 aggcgctgaatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagca 208 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 |||||||||||| || ||| ||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 209 acttgggacagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgc 268 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 |||||||||||| ||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 269 agctagcaaagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaac 328 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 |||||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 329 tgattcgatatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgt 388 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||| |||||||||||||| || |||||||||| ||||| |||||||| || || || || Sbjct: 389 ggctgtcatcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtat 448 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 |||||| |||||||| || |||||||| || || ||||||||||||||||| || ||||| Sbjct: 449 cgaggatgcgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtgg 508 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 | | || |||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 509 tacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagacca 568 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggc 517 || |||||||||||||| ||||| ||||| ||||| Sbjct: 569 tgatgagcgccttggtgcagacattattcaaaaggc 604
>dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D12, full insert sequence Length = 1985 Score = 468 bits (236), Expect = e-129 Identities = 447/516 (86%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 1019 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 1077 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||| ||||||| ||||| || || || ||| || ||||||||||||| || | ||| || Sbjct: 1078 aggcgctgaatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagca 1137 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 |||||||||||| || ||| ||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 1138 acttgggacagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgc 1197 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 |||||||||||| ||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 1198 agctagcaaagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaac 1257 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 |||||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1258 tgattcgatatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgt 1317 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||| |||||||||||||| || |||||||||| ||||| |||||||| || || || || Sbjct: 1318 ggctgtcatcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtat 1377 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 |||||| |||||||| || |||||||| || || ||||||||||||||||| || ||||| Sbjct: 1378 cgaggatgcgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtgg 1437 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 | | || |||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 1438 tacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagacca 1497 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggc 517 || |||||||||||||| ||||| ||||| ||||| Sbjct: 1498 tgatgagcgccttggtgcagacattattcaaaaggc 1533
>dbj|AK061410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B08, full insert sequence Length = 1087 Score = 468 bits (236), Expect = e-129 Identities = 447/516 (86%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 38 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 96 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||| ||||||| ||||| || || || ||| || ||||||||||||| || | ||| || Sbjct: 97 aggcgctgaatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagca 156 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 |||||||||||| || ||| ||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 157 acttgggacagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgc 216 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 |||||||||||| ||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 217 agctagcaaagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaac 276 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 |||||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 277 tgattcgatatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgt 336 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||| |||||||||||||| || |||||||||| ||||| |||||||| || || || || Sbjct: 337 ggctgtcatcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtat 396 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 |||||| |||||||| || |||||||| || || ||||||||||||||||| || ||||| Sbjct: 397 cgaggatgcgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtgg 456 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 | | || |||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 457 tacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagacca 516 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggc 517 || |||||||||||||| ||||| ||||| ||||| Sbjct: 517 tgatgagcgccttggtgcagacattattcaaaaggc 552
>dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K17, full insert sequence Length = 2070 Score = 460 bits (232), Expect = e-126 Identities = 446/516 (86%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 1021 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 1079 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||| ||||||| ||||| || || || ||| || ||||||||||||| || | ||| || Sbjct: 1080 aggcgctgaatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagca 1139 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 |||||||||||| || ||| ||||||| |||||| ||||||| ||||||||||| ||||| Sbjct: 1140 acttgggacagcgagaaaagtcacaatacatcaggctacaacaaccctcatagcggatgc 1199 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 |||||||||||| ||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 1200 agctagcaaagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaac 1259 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 |||||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1260 tgattcgatatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgt 1319 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||| |||||||||||||| || |||||||||| ||||| |||||||| || || || || Sbjct: 1320 ggctgtcatcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtat 1379 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 |||||| |||||||| || |||||||| || || ||||||||||||||||| || ||||| Sbjct: 1380 cgaggatgcgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtgg 1439 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 | | || |||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 1440 tacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagacca 1499 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggc 517 || |||||||||||||| ||||| ||||| ||||| Sbjct: 1500 tgatgagcgccttggtgcagacattattcaaaaggc 1535
>dbj|AK119217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E10, full insert sequence Length = 1543 Score = 460 bits (232), Expect = e-126 Identities = 446/516 (86%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 548 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 606 Query: 62 aggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagacca 121 ||| ||||||| ||||| || || || ||| || ||||||||||||| || | ||| || Sbjct: 607 aggcgctgaatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagca 666 Query: 122 acttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgc 181 |||||||||||| || ||| ||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 667 acttgggacagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgc 726 Query: 182 agctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaac 241 |||||||||||| ||||| ||||| |||||||||||||||||||||| || || ||||| Sbjct: 727 agctagcaaagatgagattcaggcaagggttgcacagctaaagaagggactctccgaaac 786 Query: 242 tgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggtgt 301 |||||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 787 tgattcgatatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgt 846 Query: 302 ggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggat 361 ||| |||||||||||||| || |||||||||| ||||| |||||||| || || || || Sbjct: 847 ggctgtcatcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtat 906 Query: 362 cgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtgg 421 |||||| |||||||| || |||||||| || || ||||||||||||||||| || ||||| Sbjct: 907 cgaggatgcgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtgg 966 Query: 422 tgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagacca 481 | | || |||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 967 tacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagacca 1026 Query: 482 cgacgagcgccttggtgctgacatcattcagaaggc 517 || |||||||||||||| ||||| ||||| ||||| Sbjct: 1027 tgatgagcgccttggtgcagacattattcaaaaggc 1062
>emb|AJ234407.1|HVU234407 Hordeum vulgare partial mRNA; clone cMWG0655 Length = 247 Score = 426 bits (215), Expect = e-116 Identities = 232/243 (95%) Strand = Plus / Minus Query: 283 ccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcg 342 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ccaatctttctggtggtgtvgccgtcatcaaggttggagcaacaactgagacagagctcg 184 Query: 343 aggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagg 402 ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 183 aggaccgtcagctgcsgatcgaggmcgsgaagaacnccactttcgctgccatcgaggagg 124 Query: 403 gcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctgcgatca 462 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 123 gcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgttcctkcgatca 64 Query: 463 aagaaacaattgaagaccacgacgagcgccttggtgctgacatcattcagaaggcattgc 522 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 63 aagaaacaattgaagaccacgvcgagcbncttggtgctgacatcattcagaaggcattgc 4 Query: 523 aag 525 ||| Sbjct: 3 aag 1
>gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence Length = 2106 Score = 416 bits (210), Expect = e-113 Identities = 439/514 (85%), Gaps = 1/514 (0%) Strand = Plus / Plus Query: 8 ccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgacaggtgc 67 |||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 1030 ccaagttttggtgag-cggcggaaggctgtacttcaggacattgccatcgtcacaggtgc 1088 Query: 68 tgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagaccaacttgg 127 ||| | |||||| || ||||||||| |||||||||| ||||| || | || |||||||| Sbjct: 1089 tgagttcctagcaaaagatcttggtttgttggttgaaaatgctacagaggaacaacttgg 1148 Query: 128 gacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgcagctag 187 |||||||||||| |||| || |||||||||||||| |||||||||||||||||||| || Sbjct: 1149 cacagcaaggaaagtcacgatacatcagactacaacaaccctcatagcagatgcagccag 1208 Query: 188 caaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaactgattc 247 ||||| ||||||||||||||| ||||||| || |||||||||||| |||| |||||||| Sbjct: 1209 taaagatgagatccaggcgaggattgcacaactgaagaaggagcttgctgagactgattc 1268 Query: 248 catctatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgt 307 | |||||| ||||||||||||||||||| ||||| |||||| | |||||||| || || Sbjct: 1269 agtttatgatactgagaaattggctgagagaattgctaagcttgccggtggtgttgctgt 1328 Query: 308 catcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgagga 367 |||||||||||||| |||||||||| ||||| |||||||| || || | || ||||| Sbjct: 1329 tatcaaggttggagctgcaactgagactgagcttgaggaccgccaactaagaattgagga 1388 Query: 368 cgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggc 427 || || || |||||||| || || || ||||||||||||||||| || ||||||||||| Sbjct: 1389 tgcaaaaaatgccacttttgcagctatagaggagggcattgttccaggaggtggtgcggc 1448 Query: 428 atatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagaccacgacga 487 |||||||||||||||||| ||||||| |||||||||| ||||||| |||| || || Sbjct: 1449 atatgtgcacctatctacggttgtccctaagatcaaagaagcaattgaggaccctgatga 1508 Query: 488 gcgccttggtgctgacatcattcagaaggcattg 521 ||| ||||| ||||| || ||||| ||||||||| Sbjct: 1509 gcgtcttggcgctgatattattcaaaaggcattg 1542
>gb|AY108518.1| Zea mays PCO123570 mRNA sequence Length = 1387 Score = 416 bits (210), Expect = e-113 Identities = 439/514 (85%), Gaps = 1/514 (0%) Strand = Plus / Plus Query: 8 ccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgacaggtgc 67 |||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 289 ccaagttttggtgag-cggcggaaggctgtacttcaggacattgccatcgtcacaggtgc 347 Query: 68 tgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagaccaacttgg 127 ||| | |||||| || ||||||||| |||||||||| ||||| || | || |||||||| Sbjct: 348 tgagttcctagcaaaagatcttggtttgttggttgaaaatgctacagaggaacaacttgg 407 Query: 128 gacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgcagctag 187 |||||||||||| |||| || |||||||||||||| |||||||||||||||||||| || Sbjct: 408 cacagcaaggaaagtcacgatacatcagactacaacaaccctcatagcagatgcagccag 467 Query: 188 caaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaactgattc 247 ||||| ||||||||||||||| ||||||| || |||||||||||| |||| |||||||| Sbjct: 468 taaagatgagatccaggcgaggattgcacaactgaagaaggagcttgctgagactgattc 527 Query: 248 catctatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgt 307 | |||||| ||||||||||||| ||||| ||||| |||||| | |||||||| || || Sbjct: 528 agtttatgatactgagaaattggccgagagaattgctaagcttgccggtggtgttgctgt 587 Query: 308 catcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgagga 367 |||||||||||||| |||||||||| ||||| |||||||| ||||| | || ||||| Sbjct: 588 tatcaaggttggagctgcaactgagactgagcttgaggaccggcagctaagaattgagga 647 Query: 368 cgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggc 427 || || || |||||||| || || || ||||||||||||||||| || ||||||||||| Sbjct: 648 tgcaaaaaatgccacttttgcagctatagaggagggcattgttccaggaggtggtgcggc 707 Query: 428 atatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagaccacgacga 487 |||||||||||||||||| ||||||| |||||||||| ||||||| |||| || || Sbjct: 708 atatgtgcacctatctacggttgtccctaagatcaaagaagcaattgaggaccctgatga 767 Query: 488 gcgccttggtgctgacatcattcagaaggcattg 521 ||| ||||| ||||| || ||||| ||||||||| Sbjct: 768 gcggcttggcgctgatattattcaaaaggcattg 801
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 396 bits (200), Expect = e-107 Identities = 365/420 (86%) Strand = Plus / Plus Query: 97 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 156 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 10295699 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 10295758 Query: 157 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 216 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 10295759 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 10295818 Query: 217 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 276 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 10295819 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 10295878 Query: 277 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 336 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 10295879 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 10295938 Query: 337 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 396 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 10295939 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 10295998 Query: 397 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 456 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 10295999 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 10296058 Query: 457 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattcagaagg 516 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||| Sbjct: 10296059 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattcaaaagg 10296118 Score = 79.8 bits (40), Expect = 8e-12 Identities = 59/64 (92%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 10295166 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 10295224 Query: 62 aggt 65 |||| Sbjct: 10295225 aggt 10295228
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 396 bits (200), Expect = e-107 Identities = 365/420 (86%) Strand = Plus / Plus Query: 97 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 156 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 10295581 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 10295640 Query: 157 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 216 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 10295641 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 10295700 Query: 217 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 276 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 10295701 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 10295760 Query: 277 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 336 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 10295761 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 10295820 Query: 337 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 396 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 10295821 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 10295880 Query: 397 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 456 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 10295881 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 10295940 Query: 457 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattcagaagg 516 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||| Sbjct: 10295941 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattcaaaagg 10296000 Score = 79.8 bits (40), Expect = 8e-12 Identities = 59/64 (92%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 10295048 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 10295106 Query: 62 aggt 65 |||| Sbjct: 10295107 aggt 10295110
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 396 bits (200), Expect = e-107 Identities = 365/420 (86%) Strand = Plus / Plus Query: 97 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 156 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 58618 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 58677 Query: 157 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 216 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 58678 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 58737 Query: 217 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 276 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 58738 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 58797 Query: 277 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 336 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 58798 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 58857 Query: 337 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 396 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 58858 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 58917 Query: 397 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 456 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 58918 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 58977 Query: 457 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattcagaagg 516 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||| Sbjct: 58978 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattcaaaagg 59037 Score = 79.8 bits (40), Expect = 8e-12 Identities = 59/64 (92%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 2 aaagccccaagtttcggtgagacggcggaaggctgtccttcaggatattgccatcgtgac 61 |||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 58085 aaagccccaagttttggtgag-cgacgcaaggctgtccttcaggatattgccattgtgac 58143 Query: 62 aggt 65 |||| Sbjct: 58144 aggt 58147
>emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alpha subunit Length = 1975 Score = 135 bits (68), Expect = 2e-28 Identities = 131/152 (86%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||||||||| ||||| ||||||||||| |||||||| || || |||||| | ||| Sbjct: 1275 gctgagaggattgctaagctctctggtggtgttgccgtcattaaagtcggagcagcgact 1334 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 ||||| ||||||||||||||| |||| || || ||||| || |||||||| || |||||| Sbjct: 1335 gagaccgagctcgaggaccgtaagcttcgtattgaggatgcaaagaacgcaacgttcgct 1394 Query: 390 gccatcgaggagggcattgttcccggtggtgg 421 || |||||||| || || |||||||||||||| Sbjct: 1395 gctatcgaggaaggaatagttcccggtggtgg 1426
>gb|AY108560.1| Zea mays PCO140434 mRNA sequence Length = 2143 Score = 127 bits (64), Expect = 4e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 ||||||||||| |||||||||||||| |||||||| || | || ||||| |||| ||| Sbjct: 1262 atagcagatgctgctagcaaagacgatatccaggccagaatcgcgcagctgaagagagag 1321 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || | ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 1322 ctttctcagacggactcgacgtatgactctgagaagttggcagagagaattgcaaagctt 1381 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 |||||||| || || || | |||||||||||| | || ||| ||||||| |||||||| Sbjct: 1382 tctggtggagttgctgtggttaaggttggagcatcgaccgaggcagagctagaggaccgc 1441 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || || |||||||||||||| || ||||| || || || ||||| || |||||| Sbjct: 1442 aagctccgcatagaggacgcgaagaatgcgacttttgcagcaatagaggaaggtattgtt 1501 Query: 411 cccggtggtggtgcggcatatgtgcacctatc 442 || || || ||||| |||||||| || ||||| Sbjct: 1502 ccaggaggcggtgcagcatatgttcatctatc 1533 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 39 cttcaggatattgccatcgtgacaggtgctgaatacctagcgaaggatcttggtct 94 |||||||| |||||||| || |||||||||||||| | | | || ||||||||||| Sbjct: 1130 cttcaggacattgccattgttacaggtgctgaatatcaatccaaagatcttggtct 1185
>ref|NM_128359.3| Arabidopsis thaliana CPN60A; ATP binding / protein binding AT2G28000 (CPN60A) mRNA, complete cds Length = 2103 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1365 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1424 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1425 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1484 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1485 gctatcgaggaaggcatagttccaggtggtggtgc 1519
>gb|BT008784.1| Arabidopsis thaliana At2g28000 gene, complete cds Length = 1761 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1228 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1287 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1288 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1347 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1348 gctatcgaggaaggcatagttccaggtggtggtgc 1382
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete sequence Length = 94884 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Minus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 32453 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 32394 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 32393 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 32334 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 32333 gctatcgaggaaggcatagttccaggtggtggtgc 32299
>dbj|AK222126.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-94-G01 Length = 1181 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 469 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 528 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 529 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 588 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 589 gctatcgaggaaggcatagttccaggtggtggtgc 623
>gb|U49357.1|ATU49357 Arabidopsis thaliana chaperonin-60 alpha subunit gene, nuclear gene encoding plastid protein, complete cds Length = 4365 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 2620 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 2679 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 2680 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 2739 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 2740 gctatcgaggaaggcatagttccaggtggtggtgc 2774
>emb|BX819680.1|CNS0A9ZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2019 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1294 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1353 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1354 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1413 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1414 gctatcgaggaaggcatagttccaggtggtggtgc 1448
>gb|AY086555.1| Arabidopsis thaliana clone 25773 mRNA, complete sequence Length = 1996 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1305 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1364 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1365 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1424 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1425 gctatcgaggaaggcatagttccaggtggtggtgc 1459
>gb|BT002441.1| Arabidopsis thaliana putative rubisco subunit binding-protein alpha subunit (At2g28000) mRNA, complete cds Length = 2020 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 270 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 329 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1310 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1369 Query: 330 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 389 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1370 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1429 Query: 390 gccatcgaggagggcattgttcccggtggtggtgc 424 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1430 gctatcgaggaaggcatagttccaggtggtggtgc 1464
>dbj|AB236859.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C766 Length = 1971 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1197 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1256 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1257 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1316 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1317 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1376 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1377 gctgccattgaggaaggtattgttcctggtgg 1408
>dbj|AB236852.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C618 Length = 1443 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 792 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 851 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 852 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 911 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 912 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 971 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 972 gctgccattgaggaaggtattgttcctggtgg 1003
>dbj|AB236850.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C580 Length = 1986 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1219 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1278 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1279 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1338 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1339 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1398 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1399 gctgccattgaggaaggtattgttcctggtgg 1430
>dbj|AB236844.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C447 Length = 1999 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1215 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1274 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1275 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1334 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1335 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1394 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1395 gctgccattgaggaaggtattgttcctggtgg 1426
>dbj|AB236783.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1772 Length = 2038 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1207 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1266 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1267 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1326 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1327 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1386 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1387 gctgccattgaggaaggtattgttcctggtgg 1418
>dbj|AB236779.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1724 Length = 1982 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1199 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1258 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1259 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1318 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1319 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1378 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1379 gctgccattgaggaaggtattgttcctggtgg 1410
>dbj|AB236775.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C1598 Length = 2018 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1143 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1202 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1203 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1262 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1263 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1322 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 |||||||| ||||| || |||||||| ||||| Sbjct: 1323 gctgccattgaggaaggtattgttcctggtgg 1354
>ref|XM_470503.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 89.7 bits (45), Expect = 9e-15 Identities = 213/269 (79%) Strand = Plus / Plus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 1194 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 1253 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 1254 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 1313 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 1314 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 1373 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 1374 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 1433 Query: 411 cccggtggtggtgcggcatatgtgcacct 439 || || ||||||||||| ||||| ||||| Sbjct: 1434 cctggaggtggtgcggcctatgttcacct 1462 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 486 gagcgccttggtgctgacatcattcagaaggc 517 ||||||||||||||||| |||||||| ||||| Sbjct: 1509 gagcgccttggtgctgatatcattcaaaaggc 1540 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 25 ggcggaaggctgtccttcaggatattgccatcgtgacaggtgctgaat 72 |||| |||||| | |||||||| || |||||||| ||||||||||||| Sbjct: 1048 ggcgtaaggctcttcttcaggacatcgccatcgttacaggtgctgaat 1095
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 9e-15 Identities = 213/269 (79%) Strand = Plus / Minus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 35978530 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 35978471 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 35978470 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 35978411 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 35978410 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 35978351 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 35978350 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 35978291 Query: 411 cccggtggtggtgcggcatatgtgcacct 439 || || ||||||||||| ||||| ||||| Sbjct: 35978290 cctggaggtggtgcggcctatgttcacct 35978262 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 486 gagcgccttggtgctgacatcattcagaagg 516 ||||||||||||||||| |||||||| |||| Sbjct: 35978215 gagcgccttggtgctgatatcattcaaaagg 35978185
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 89.7 bits (45), Expect = 9e-15 Identities = 213/269 (79%) Strand = Plus / Minus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 40041 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 39982 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 39981 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 39922 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 39921 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 39862 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 39861 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 39802 Query: 411 cccggtggtggtgcggcatatgtgcacct 439 || || ||||||||||| ||||| ||||| Sbjct: 39801 cctggaggtggtgcggcctatgttcacct 39773 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 486 gagcgccttggtgctgacatcattcagaagg 516 ||||||||||||||||| |||||||| |||| Sbjct: 39726 gagcgccttggtgctgatatcattcaaaagg 39696
>dbj|AK061901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H05, full insert sequence Length = 1107 Score = 89.7 bits (45), Expect = 9e-15 Identities = 213/269 (79%) Strand = Plus / Plus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 303 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 362 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 363 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 422 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 423 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 482 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 483 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 542 Query: 411 cccggtggtggtgcggcatatgtgcacct 439 || || ||||||||||| ||||| ||||| Sbjct: 543 cctggaggtggtgcggcctatgttcacct 571 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 486 gagcgccttggtgctgacatcattcagaaggc 517 ||||||||||||||||| |||||||| ||||| Sbjct: 618 gagcgccttggtgctgatatcattcaaaaggc 649 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 25 ggcggaaggctgtccttcaggatattgccatcgtgacaggtgctgaat 72 |||| |||||| | |||||||| || |||||||| ||||||||||||| Sbjct: 157 ggcgtaaggctcttcttcaggacatcgccatcgttacaggtgctgaat 204
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 9e-15 Identities = 213/269 (79%) Strand = Plus / Minus Query: 171 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 230 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 36068604 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 36068545 Query: 231 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 290 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 36068544 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 36068485 Query: 291 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 350 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 36068484 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 36068425 Query: 351 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 410 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 36068424 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 36068365 Query: 411 cccggtggtggtgcggcatatgtgcacct 439 || || ||||||||||| ||||| ||||| Sbjct: 36068364 cctggaggtggtgcggcctatgttcacct 36068336 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 486 gagcgccttggtgctgacatcattcagaagg 516 ||||||||||||||||| |||||||| |||| Sbjct: 36068289 gagcgccttggtgctgatatcattcaaaagg 36068259
>gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence Length = 2098 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 261 gagaaattggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttgga 320 |||||| | |||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1291 gagaaacttgctgagagaattgccaagctttctgggggtgtcgccgtcattaaggttgga 1350 Query: 321 gcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgcc 380 || |||| ||| | ||||| || ||||| |||| || || || || || ||||| || Sbjct: 1351 gctgcaacagaggccgagcttgaagaccgcaagcttcgtattgaagatgcaaagaatgca 1410 Query: 381 actttcgctgccatcgaggagggcattgttcccggtggtggtgcggcatatgtgcaccta 440 ||||| ||||| || || ||||| || || || ||||||||||| || | ||| || || Sbjct: 1411 acttttgctgcaattgaagagggaatagtacctggtggtggtgctgcttttgttcattta 1470 Query: 441 tctacctatgtccctgc 457 || || ||||||||||| Sbjct: 1471 tcaacttatgtccctgc 1487 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 gctgacatcattcagaaggcattg 521 |||||||||||||| ||||||||| Sbjct: 1528 gctgacatcattcaaaaggcattg 1551
>dbj|AK222099.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-88-A01 Length = 645 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 320 agcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgc 379 |||| ||||||| || ||||| ||||||||| |||| || |||||||| || |||||||| Sbjct: 6 agcagcaactgaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgc 65 Query: 380 cactttcgctgccatcgaggagggcattgttcccggtggtggtgc 424 || || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 66 aacatttgctgctatcgaggaaggcatagttccaggtggtggtgc 110
>gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacpn60) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1977 Score = 79.8 bits (40), Expect = 8e-12 Identities = 169/212 (79%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 266 ||||||||||| |||||||| ||| | ||||| || || || || ||||||||||||||| Sbjct: 1198 agggttgcacaactaaagaaagagttgtctgagacagactcaatttatgattctgagaaa 1257 Query: 267 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 326 | || ||||| ||||| ||| | |||||||| || || ||||||||||| || || | Sbjct: 1258 ctcgccgagagaattgctaagttgtctggtggagttgctgtcatcaaggtcggtgctgcc 1317 Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1318 acagagaccgaactggaggatcgtaagctccgtattgaggatgccaagaatgcaactttt 1377 Query: 387 gctgccatcgaggagggcattgttcccggtgg 418 || ||||| ||||| || |||||||| ||||| Sbjct: 1378 gccgccattgaggaaggtattgttcctggtgg 1409
>gb|L27472.1|CRECPN1B Chlamydomonas reinhardtii chaperonin alpha-like subunit, complete cds Length = 2420 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 297 ggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctg 356 |||||||||||||||||||| || || | || ||| | ||||| |||||||| ||||| Sbjct: 1227 ggtgtggccgtcatcaaggtgggcgccgccacggaggccgagctggaggaccgcaagctg 1286 Query: 357 cggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccgg 415 || || |||||||| ||||||||||| ||||| ||| | ||||||||||| || ||||| Sbjct: 1287 cgcattgaggacgccaagaacgccaccttcgccgccgtggaggagggcatcgtgcccgg 1345
>gb|M35599.1|BNA60CPNA B.napus plastid 60-kDa chaperonin-60 alpha-polypeptide (cpn-60 alpha) mRNA, 3' end Length = 1789 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 327 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 386 |||||||| ||||||||||||||| |||| || |||||||||||||||||||| || || Sbjct: 1167 actgagactgagctcgaggaccgtaagcttcgtatcgaggacgcgaagaacgctacattt 1226 Query: 387 gctgccatcga 397 ||||| ||||| Sbjct: 1227 gctgcaatcga 1237
>gb|AF030515.1|AF030515 Canavalia lineata chaperonin 60 alpha subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2040 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 24 cggcggaaggctgtccttcaggatattgccatcgtgacaggtgctga 70 ||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1052 cggcgaaaggctgtccttcaagatattgccatattgacaggtgctga 1098
>emb|X07852.1|RCRSBA Castor-bean mRNA for Rubisco subunit binding-protein alpha subunit Length = 1488 Score = 60.0 bits (30), Expect = 8e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 252 tatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgtcatc 311 ||||| || |||||| ||||||| || ||||| || | || ||||| || || |||||| Sbjct: 1040 tatgactccgagaaactggctgaaagaattgctaaattgtccggtggggttgctgtcatc 1099 Query: 312 aaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcg 371 || || ||||| |||| ||||| ||||| || |||||| | || || || ||||| || Sbjct: 1100 aaagtgggagctgcaacggagactgagcttgaagaccgtaaactccgaattgaggatgcc 1159 Query: 372 aagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggcat 429 |||||||| || || ||||| || ||||| |||||||| || ||||||||||| |||| Sbjct: 1160 aagaacgctacatttgctgcaatagaggaaggcattgtccctggtggtggtgctgcat 1217
>gb|DQ295240.1| Uncultured marine bacterium Ant29B7, partial genomic sequence Length = 40351 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 387 gctgccatcgaggagggcattgttcccggtggtggtg 423 ||||||||||||||||| ||||||||||| ||||||| Sbjct: 26655 gctgccatcgaggagggtattgttcccggcggtggtg 26691
>ref|XM_814415.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.290) partial mRNA Length = 1680 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 397 aggagggcattgttcccggtggtggtg 423 ||||||||||||||||||||||||||| Sbjct: 1253 aggagggcattgttcccggtggtggtg 1279
>emb|X67473.1|TCHSP60 T.cruzi hsp60 gene Length = 2100 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 397 aggagggcattgttcccggtggtggtg 423 ||||||||||||||||||||||||||| Sbjct: 1660 aggagggcattgttcccggtggtggtg 1686
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 276 aggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagaca 335 |||||||| || || |||||||||||||| || || ||||||| ||| |||||||||| Sbjct: 1367 aggattgcaaaactgtctggtggtgtggctgtaatacaggttggtgcacaaactgagaca 1426 Query: 336 gagctcgagga 346 |||||| |||| Sbjct: 1427 gagctcaagga 1437
>gb|L08791.1|TRBHSP60A Trypanosoma cruzi heat shock protein 60 mRNA, complete cds and flanking regions Length = 2020 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 397 aggagggcattgttcccggtggtggtg 423 ||||||||||||||||||||||||||| Sbjct: 1398 aggagggcattgttcccggtggtggtg 1424
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 279 attgccaagctttctggtggtgtggccgtcatcaaggttgg 319 ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 25709 attgccaagctggccggtggtgtagccgtcatcaaggttgg 25749
>emb|AL113347.1|CNS01ASR Botrytis cinerea strain T4 cDNA library Length = 660 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 359 ttgctaagctttctggtggtgtagccgttatcaaggt 395
>emb|AL112456.1|CNS01A40 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 342 ttgctaagctttctggtggtgtagccgttatcaaggt 378
>emb|AL111827.1|CNS019MJ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 151 ttgctaagctttctggtggtgtagccgttatcaaggt 187
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1352 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1403
>ref|XM_386422.1| Gibberella zeae PH-1 chromosome 3 HS60_AJECA Heat shock protein 60, mitochondrial precursor (Antigen HIS-62) (FG06246.1) partial mRNA; nuclear gene for mitochondrial product Length = 1764 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggttgg 319 |||||||||| ||||| ||||| || |||||||||||||| Sbjct: 1202 ttgccaagctctctggcggtgttgctgtcatcaaggttgg 1241
>ref|XM_504920.1| Yarrowia lipolytica CLIB122, YALI0F02805g predicted mRNA Length = 1725 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggttggag 321 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 1165 gccaagctgtctggcggtgttgccgtcatcaaggtcggag 1204
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1352 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1403
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1020 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1071
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 346 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 397
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggttggag 321 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 405669 gccaagctgtctggcggtgttgccgtcatcaaggtcggag 405708
>ref|XM_951407.1| Neurospora crassa OR74A hypothetical protein ( probable heat-shock protein hsp60 [imported] - Neurospora crassa OR74A emb|CAB91379.2| (AL355930) probabl> (NCU01589.1) partial mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggt 316 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1180 gccaagctctctggcggtgttgccgtcatcaaggt 1214
>ref|XM_328027.1| Neurospora crassa OR74A hypothetical protein ( probable heat-shock protein hsp60 [imported] - Neurospora crassa OR74A emb|CAB91379.2| (AL355930) probable hea> (NCU01589.1) partial mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggt 316 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1180 gccaagctctctggcggtgttgccgtcatcaaggt 1214
>ref|XM_756885.1| Ustilago maydis 521 hypothetical protein (UM05831.1) partial mRNA Length = 1749 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggt 316 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1195 gccaagctctctggcggtgtagccgtcatcaaggt 1229
>ref|XM_814413.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.280) partial mRNA Length = 1683 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 397 aggagggcattgttcccggtggtggtg 423 ||||||| ||||||||||||||||||| Sbjct: 1247 aggagggtattgttcccggtggtggtg 1273
>ref|XM_814417.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.300) partial mRNA Length = 787 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 397 aggagggcattgttcccggtggtggtg 423 ||||||| ||||||||||||||||||| Sbjct: 351 aggagggtattgttcccggtggtggtg 377
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 358 ggatcgaggacgcgaagaacgcc 380 ||||||||||||||||||||||| Sbjct: 47694 ggatcgaggacgcgaagaacgcc 47672
>emb|AL355930.2|NCB2O8 Neurospora crassa DNA linkage group II BAC clone B2O8 Length = 162671 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 282 gccaagctttctggtggtgtggccgtcatcaaggt 316 |||||||| ||||| ||||| |||||||||||||| Sbjct: 98037 gccaagctctctggcggtgttgccgtcatcaaggt 98071
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcat 310 |||||||||||| |||||| |||||||||| || ||||| Sbjct: 811899 tgagaggattgcaaagcttgctggtggtgttgcagtcat 811861
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcat 310 |||||||||||| |||||| |||||||||| || ||||| Sbjct: 95033 tgagaggattgcaaagcttgctggtggtgttgcagtcat 94995
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1363 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1422 Query: 332 gacaga 337 |||||| Sbjct: 1423 gacaga 1428
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1390 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1449 Query: 332 gacaga 337 |||||| Sbjct: 1450 gacaga 1455
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 44.1 bits (22), Expect = 0.46 Identities = 58/70 (82%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || |||||||||| |||||| Sbjct: 1248 tgagagaattgcgaagctctctggtggagttgctgtaattcaggttggagctcaaactga 1307 Query: 332 gacagagctc 341 |||||||||| Sbjct: 1308 gacagagctc 1317
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 gccaagctttctggtggtgtggccgt 307 |||||||||||||||||||| ||||| Sbjct: 112807 gccaagctttctggtggtgttgccgt 112782
>emb|AL356312.12| Human DNA sequence from clone RP11-172A19 on chromosome 13, complete sequence Length = 60683 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 acagctaaagaaggagctttct 236 |||||||||||||||||||||| Sbjct: 30774 acagctaaagaaggagctttct 30795
>emb|X95992.1|EGHSP60GN E.gracilis mRNA for heat shock protein 60 Length = 1946 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 399 gagggcattgttcccggtggtggtgc 424 |||||||| ||||||||||||||||| Sbjct: 1272 gagggcatcgttcccggtggtggtgc 1297
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1260 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1319 Query: 332 gacaga 337 |||||| Sbjct: 1320 gacaga 1325
>gb|AF240565.2|AF240565 Bifidobacterium denticolens heat shock protein 60 (hsp60) gene, complete cds Length = 2033 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 ggtggtgtggccgtcatcaaggttgg 319 |||||||| ||||||||||||||||| Sbjct: 1310 ggtggtgtcgccgtcatcaaggttgg 1335
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1382 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1441 Query: 332 gacaga 337 |||||| Sbjct: 1442 gacaga 1447
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 331 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1345 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1404 Query: 332 gacaga 337 |||||| Sbjct: 1405 gacaga 1410
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| |||||||||| || | |||||||| |||||||||||||| Sbjct: 1680251 tgagcggattgccaaactggccggtggtgttgccgtcatcaaggt 1680295
>gb|BT013632.1| Lycopersicon esculentum clone 132434F, mRNA sequence Length = 2127 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 gagggcattgttcccggtggtggtg 423 |||||||||||||| |||||||||| Sbjct: 1411 gagggcattgttccaggtggtggtg 1435
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 atcgaggagggcattgttcccggtggtgg 421 ||||| || |||||||||||||||||||| Sbjct: 29681 atcgaagaaggcattgttcccggtggtgg 29709
>gb|AY121367.1| Streptococcus dysgalactiae strain HKU 7 chaperonin GroEL gene, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggt 316 ||||||||||||| ||||||||||| Sbjct: 1027 ctggtggtgtggctgtcatcaaggt 1051
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 279 attgccaagctttctggtggtgtggccgt 307 |||||||| ||||||||||| |||||||| Sbjct: 1811888 attgccaaactttctggtggcgtggccgt 1811860
>dbj|AK047518.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082I23 product:unclassifiable, full insert sequence Length = 3307 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 caaagaaacaattgaagacca 481 ||||||||||||||||||||| Sbjct: 2508 caaagaaacaattgaagacca 2488
>emb|AL114749.1|CNS01BVP Botrytis cinerea strain T4 cDNA library Length = 780 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| ||||||||||||||||| |||| |||||||| Sbjct: 585 ttgctaagctttctggtggtgtaaccgttatcaaggt 621
>emb|AL112107.1|CNS019UB Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 280 ttgccaagctttctggtggtgtggccgtcatcaaggt 316 |||| ||||||||||||||||| |||| |||||||| Sbjct: 337 ttgctaagctttctggtggtgtagccgatatcaaggt 373
>gb|AY121366.1| Streptococcus dysgalactiae subsp. equisimilis strain CIP 55-123 chaperonin GroEL gene, partial cds Length = 1422 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggt 316 ||||||||||||| ||||||||||| Sbjct: 1034 ctggtggtgtggctgtcatcaaggt 1058
>gb|AY121365.1| Streptococcus dysgalactiae subsp. equisimilis strain ATCC 12394 chaperonin GroEL gene, partial cds Length = 1421 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggt 316 ||||||||||||| ||||||||||| Sbjct: 1042 ctggtggtgtggctgtcatcaaggt 1066
>gb|AY121364.1| Streptococcus dysgalactiae subsp. equisimilis strain ATCC 35666 chaperonin GroEL gene, partial cds Length = 1421 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggt 316 ||||||||||||| ||||||||||| Sbjct: 1033 ctggtggtgtggctgtcatcaaggt 1057
>gb|AY121363.1| Streptococcus dysgalactiae subsp. dysgalactiae strain ATCC 43078 chaperonin GroEL gene, partial cds Length = 1384 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggt 316 ||||||||||||| ||||||||||| Sbjct: 1009 ctggtggtgtggctgtcatcaaggt 1033
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 caaagaaacaattgaagacca 481 ||||||||||||||||||||| Sbjct: 150259 caaagaaacaattgaagacca 150239
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 279 attgccaagctttctggtggtgtggccgt 307 |||||||| ||||||||||| |||||||| Sbjct: 1228024 attgccaaactttctggtggcgtggccgt 1227996
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 1380 aggttggagcacaaactgagacagagct 1407
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 1420 aggttggagcacaaactgagacagagct 1447
>gb|AY780524.1| Ictalurus punctatus heat shock protein 60-like mRNA, partial sequence Length = 186 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 394 tcgaggagggcattgttcccggtggtgg 421 |||| ||||||||||||||||| ||||| Sbjct: 32 tcgaagagggcattgttcccggaggtgg 59
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1346 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1397
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1366 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1417
>gb|AC137713.8| Mus musculus chromosome 15, clone RP24-468P6, complete sequence Length = 155341 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 acctatctacctatgtccct 455 |||||||||||||||||||| Sbjct: 126383 acctatctacctatgtccct 126402
>gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, complete sequence Length = 181495 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gaaaatcacaattcatcaga 156 |||||||||||||||||||| Sbjct: 45600 gaaaatcacaattcatcaga 45581
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggatcgaggacgcgaag 374 |||||||||||||||||||| Sbjct: 3161851 tgcggatcgaggacgcgaag 3161870
>gb|BT013144.1| Lycopersicon esculentum clone 134139R, mRNA sequence Length = 2052 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 381 actttcgctgccatcgaggagggcattgttcccggtggtggtgc 424 ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 1423 actttcgctgcaattgaagagggaattgtacctggtggtggtgc 1466
>ref|XM_750170.1| Aspergillus fumigatus Af293 antigenic mitochondrial protein HSP60 (Afu2g09290) partial mRNA Length = 1764 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 285 aagctttctggtggtgtggccgtcatcaaggt 316 ||||| ||||| ||||| |||||||||||||| Sbjct: 1213 aagctctctggcggtgttgccgtcatcaaggt 1244
>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence Length = 206192 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctgattccatctatgattct 260 |||||||||||||||||||| Sbjct: 50010 ctgattccatctatgattct 50029
>ref|XM_846305.1| PREDICTED: Canis familiaris similar to leucyl/cystinyl aminopeptidase isoform 1 (LOC488896), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tcaaggttggagcaacaactgaga 333 ||||||||||||||| |||||||| Sbjct: 2609 tcaaggttggagcaaaaactgaga 2632
>emb|AL139390.15| Human DNA sequence from clone RP11-556O15 on chromosome 6p24.1-25.3 Contains part of a novel gene,, complete sequence Length = 102581 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ccaacttgggacagcaaggaaaat 142 ||||||||||||| |||||||||| Sbjct: 13913 ccaacttgggacaccaaggaaaat 13890
>emb|AL138930.15| Human DNA sequence from clone RP11-528G1 on chromosome 1 Contains the SLAMF6 gene for SLAM family member 6, the CD84 gene for CD84 antigen (leukocyte antigen), a novel gene and the 3' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, complete sequence Length = 175386 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 agggttgcacagctaaagaa 226 |||||||||||||||||||| Sbjct: 57676 agggttgcacagctaaagaa 57695
>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence Length = 126083 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cattcagaaggcattgcaag 525 |||||||||||||||||||| Sbjct: 9023 cattcagaaggcattgcaag 9004
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 18 aggttggagcacaaactgagacagagct 45
>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209766 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgattccatctatgattct 260 |||||||||||||||||||| Sbjct: 17742 ctgattccatctatgattct 17723
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 241 aggttggagcacaaactgagacagagct 268
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 774 aggttggagcacaaactgagacagagct 801
>gb|AY688374.2| Lates calcarifer parvalbumin beta-1 gene, complete cds Length = 2749 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ggtgctgacatcattcagaa 514 |||||||||||||||||||| Sbjct: 1767 ggtgctgacatcattcagaa 1748
>gb|AC008974.7|AC008974 Homo sapiens chromosome 19 clone LLNLF-116A8, complete sequence Length = 38000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aggatcttggtctgttggtt 101 |||||||||||||||||||| Sbjct: 24212 aggatcttggtctgttggtt 24193
>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence Length = 134793 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aggatcttggtctgttggtt 101 |||||||||||||||||||| Sbjct: 3769 aggatcttggtctgttggtt 3750
>gb|AF215852.1|AF215852 Nicotiana tabacum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1795 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 tgaatacctagcgaaggatcttgg 91 |||||||||||| ||||||||||| Sbjct: 355 tgaatacctagctaaggatcttgg 378
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 aggttggagcaacaactgagacagagct 340 ||||||||||| ||||||||||||||| Sbjct: 1472 aggttggagcacaaactgagacagagct 1499
>emb|AJ338304.1|HSA338304 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PA22RS Length = 717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 aagaaacaattgaagaccac 482 |||||||||||||||||||| Sbjct: 541 aagaaacaattgaagaccac 522
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 272 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 323 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1345 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1396
>gb|AC157016.3| Mus musculus 10 BAC RP24-505M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168538 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgattccatctatgattct 260 |||||||||||||||||||| Sbjct: 13111 ctgattccatctatgattct 13092
>gb|AC005856.1|AC005856 Homo sapiens chromosome 17, clone hRPK.136_H_19, complete sequence Length = 126910 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ctttctgaaactgattccat 250 |||||||||||||||||||| Sbjct: 64873 ctttctgaaactgattccat 64854
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 292 ctggtggtgtggccgtcatcaaggttgg 319 |||||||||| || |||||||||||||| Sbjct: 503620 ctggtggtgttgctgtcatcaaggttgg 503647
>gb|U57000.1|TVU57000 Trichomonas vaginalis chaperonin 60 (cpn60) mRNA, partial cds Length = 1678 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 387 gctgccatcgaggagggcattgttcccggtggtggt 422 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1217 gctgccatcgaggaaggcatcgttgctggtggtggt 1252
>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete sequence Length = 137773 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cattcagaaggcattgcaag 525 |||||||||||||||||||| Sbjct: 109563 cattcagaaggcattgcaag 109544 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,131,820 Number of Sequences: 3902068 Number of extensions: 4131820 Number of successful extensions: 76240 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 75878 Number of HSP's gapped (non-prelim): 344 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
