>FKBP4_GIBZE (Q4INZ9) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 495

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = +3

Query: 36  EESXETEILSAPSNPFQGNRDDRQRXVEAIPEVIPDVEEENKETEIESAAMN-PFQGNRG 212
           EE  + E    PS+P +  +   QR   AI +++   +EE+ E E+E A  N   +G   
Sbjct: 119 EEDSDEEANGGPSDPAKAKK---QRQAAAIKKLLESAQEESDE-EMEDAKPNGKAKGKAK 174

Query: 213 VT-QTVADPLEVGIDQSLEGASLQHDAACEVAFE 311
            T ++  D  E   D S EGA L++   C +  E
Sbjct: 175 ATEESDDDEDEDSDDDSEEGADLENFVICTLDTE 208

>CNKR2_RAT (Q9Z1T4) Connector enhancer of kinase suppressor of ras 2 (Connector|
            enhancer of KSR2) (CNK2) (Membrane-associated guanylate
            kinase-interacting protein) (MAGUIN)
          Length = 1032

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +3

Query: 138  PDVEEENKETEIESAAMNPFQGNRGVTQTVADPLEVGIDQSLEGASL----QHDAACEVA 305
            P+VEEE +E E E+A  N  + N    + + D L+  + ++LE ASL    +H  + ++ 
Sbjct: 874  PEVEEEEEEEEEEAAGENIGEKNENREEKLGDSLQ-DLYRALEEASLSPLGEHRISTKIE 932

Query: 306  FEAAGKALCNGGTPGPGLH 362
            ++ +    CN       LH
Sbjct: 933  YKLSFIKRCNDPVMNEKLH 951

>CNKR2_MOUSE (Q80YA9) Connector enhancer of kinase suppressor of ras 2 (Connector|
            enhancer of KSR2) (CNK2)
          Length = 1032

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +3

Query: 138  PDVEEENKETEIESAAMNPFQGNRGVTQTVADPLEVGIDQSLEGASL----QHDAACEVA 305
            P+VEEE +E E E+A  N  + N    + + D L+  + ++LE ASL    +H  + ++ 
Sbjct: 874  PEVEEEEEEEEEEAAGENVGEKNENREEKLGDSLQ-DLYRALEEASLSPLGEHRISTKME 932

Query: 306  FEAAGKALCNGGTPGPGLH 362
            ++ +    CN       LH
Sbjct: 933  YKLSFIKRCNDPVMNEKLH 951

>SEC16_SCHPO (O14029) Multidomain vesicle coat protein|
          Length = 1995

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 36   EESXETEILSAPSNPFQGNRDDRQRXVEAIPEVIPDV--EEENKETEIESAAMNPFQGNR 209
            + +   E ++APS     N+D  Q+  +A  + + D+  +EE KE + + A  N   G +
Sbjct: 1767 QSAPSAEAVAAPSESLNLNKDRSQQAKQAAAQNVADLVRQEEEKEKQKQKAKKNAESGKK 1826

Query: 210  G 212
            G
Sbjct: 1827 G 1827

>HIS4_HALSA (Q9HN14) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 242

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 198 QGNRGVTQTVADPLEVGIDQSLEGASLQHDAACEVAFEAA 317
           QG RG  +T  DP++   D    GA   H    + AFE A
Sbjct: 24  QGERGTERTYGDPVDAATDWVAAGAEALHLVDLDGAFEGA 63

>TE80_TETTH (Q94818) Telomerase component p80 (EC 2.7.7.49)|
          Length = 719

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 114 VEAIPEVIPDVEEENKETEIESAAMNPF-QGNRGVTQTVADPLEVGI 251
           +EA+ EV+   +EE K+ E+E      F + N G+ +   + +E+ I
Sbjct: 449 IEAVKEVVEKTDEEKKDMELEQTEEGEFVKVNEGIGKQYINSIELAI 495

>P80C_HUMAN (P38432) Coilin (p80)|
          Length = 576

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 31/129 (24%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
 Frame = +3

Query: 21  SXCRKEESXETEILSAPSNPFQGNRDDRQRXVEAIPEVIPDVEEENKETEIESAA----- 185
           S   + ES +  I   PS      R+  ++    +P  +   E   K T  +  A     
Sbjct: 245 SSSSESESCDESISDGPSKVTLEARNSSEK----LPTELSKEEPSTKNTTADKLAIKLGF 300

Query: 186 -MNPFQGNR-GVTQTVADPLEVGIDQSLEGASLQHDAACEVAFEAAGKALCNGGTPGPGL 359
            + P +G   G T + +D      DQ L  +S      C   F          G PGPGL
Sbjct: 301 SLTPSKGKTSGTTSSSSDSSAESDDQCLMSSSTPE---CAAGFLKTVGLFAGRGRPGPGL 357

Query: 360 HTPSNTVAG 386
            + +   AG
Sbjct: 358 SSQTAGAAG 366

>YAK1_SCHPO (Q09915) Hypothetical protein C1F7.01c in chromosome I|
          Length = 1365

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 102 RQRXVEAIPEVIPDVEEENKETEIESAAMNPFQGNR-GVTQTVADPLE 242
           R R  E   E I   EEE +E E++  A N  QG+R GV    AD +E
Sbjct: 130 RGRDQEETLENIFSEEEEEEENEVDDEAPNRTQGHRAGVIDEFADFIE 177

>RXRA_XENLA (P51128) Retinoic acid receptor RXR-alpha (Retinoid X receptor|
           alpha)
          Length = 488

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
 Frame = +3

Query: 186 MNPFQGNRGVTQTVADPLEVGIDQSLEGASLQHDAACEVAFEAAGKALCNGGTPG----- 350
           ++P  GN G+  ++  P +  +   L            V     G ++    TPG     
Sbjct: 58  LHPSLGNSGLNNSLGSPTQ--LPSPLSSPINGMGPPFSVISPPLGPSMAIPSTPGLGYGT 115

Query: 351 --PGLHTPSNTVAGVIDIDNEEXVNGL 425
             P +H+P N+V+   DI     +NG+
Sbjct: 116 GSPQIHSPMNSVSSTEDIKPPPGINGI 142

>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 33  KEESXETEILSAPSN----PFQGNRDDRQRXVEAIPEVIPDVEEENKETEIESAAMN 191
           K+++   E L+A  N     +  +R  R +    +PE++P+V+E N+ TE+   + N
Sbjct: 236 KDKNESGENLAANENISDLEWLKSRSTRIKENGEVPEIVPEVKEVNEVTEVTQQSDN 292

>AT1B4_PIG (Q9BDK6) X/potassium-transporting ATPase beta-m chain (X,K-ATPase|
           beta-m subunit)
          Length = 355

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 96  DDRQRXVEAIPEVIPDVEEENKETEIE 176
           D+ +   EA   V+PD+EEE KE E E
Sbjct: 34  DEEEEAEEARVMVVPDLEEEEKEEEEE 60

>EXO1_YEAST (P39875) Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease|
           I) (Exonuclease I) (EXO I) (Protein DHS1)
          Length = 702

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 36  EESXETEILSAPSNPFQGNRDDRQRXVEAIPEVIPDVEEENKETE 170
           E    T+I   PS+    N +D     E + EV+ D+EE+ K +E
Sbjct: 484 ESQLSTQI---PSSFITTNLEDDDNLSEEVSEVVSDIEEDRKNSE 525

>MODC_RHILO (Q98KI3) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)|
          Length = 370

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 285 DAACEVAFEAAGKALCNGGTPGPGLHTPSNTVAGVIDID 401
           D A E  FE+AG+     G  G G  T  N +AG+I  D
Sbjct: 13  DFAVEARFESAGRLTALFGPSGSGKTTLINMIAGLIRPD 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,700,319
Number of Sequences: 219361
Number of extensions: 893228
Number of successful extensions: 3412
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3411
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)