| Clone Name | bags17b24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058G04, full insert sequence Length = 2455 Score = 430 bits (217), Expect = e-117 Identities = 355/401 (88%) Strand = Plus / Plus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| ||||| |||||||| ||||| Sbjct: 1252 tgctgcttgccatgctgatcgctatcttttaatttttggtggggggtctcatgcaacatg 1311 Query: 65 ttttaatgacctacatgtccttgatttgcagacgatggaatggtcaagacccaaacagca 124 ||| |||||| | |||||||| |||||||| || ||||| ||||||||||||||||| || Sbjct: 1312 tttcaatgacttgcatgtcctcgatttgcaaacaatggagtggtcaagacccaaacaaca 1371 Query: 125 gggtccaattccaagcccacgagctggtcatgcaggtgcaactgttggggagaattggta 184 ||||| |||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 1372 gggtctggctccaagcccacgagctggccatgcaggtgcaaccgttggggaaaactggta 1431 Query: 185 cattgttggtggtggcaataacaaaagcggtgtctctgagacacttgcgcttaacatgtc 244 ||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 1432 catagttggtggtggcaataacaaaagtggtgtctctgaaacacttgtgcttaatatgtc 1491 Query: 245 aactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgccagtgaggg 304 |||| | |||||||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 1492 aactttaacatggtcagttgttagctctgtagaaggtcgtgttccccttgccagtgaggg 1551 Query: 305 catgactttattgtacagcaattatagcggagaagattatctcatttcttttggaggata 364 |||||||||| || | |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 1552 catgactttagtgcatagcaattacaatggagatgattatctcatttcttttggaggata 1611 Query: 365 caatggacggtacaacaatgaggtgtatgctcttaaactta 405 ||||||||| |||| ||||||||| | |||||||||||||| Sbjct: 1612 caatggacgatacagcaatgaggtctttgctcttaaactta 1652 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 1694 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 1753 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 1754 cgtgagattgccatggacagtgctgattc 1782
>ref|XM_470332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2444 Score = 422 bits (213), Expect = e-115 Identities = 354/401 (88%) Strand = Plus / Plus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| || || |||||||| ||||| Sbjct: 1247 tgctgcttgccatgctgatcgctatcttttaatttttggtggagggtctcatgcaacatg 1306 Query: 65 ttttaatgacctacatgtccttgatttgcagacgatggaatggtcaagacccaaacagca 124 ||| |||||| | |||||||| |||||||| || ||||| ||||||||||||||||| || Sbjct: 1307 tttcaatgacttgcatgtcctcgatttgcaaacaatggagtggtcaagacccaaacaaca 1366 Query: 125 gggtccaattccaagcccacgagctggtcatgcaggtgcaactgttggggagaattggta 184 ||||| |||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 1367 gggtctggctccaagcccacgagctggccatgcaggtgcaaccgttggggaaaactggta 1426 Query: 185 cattgttggtggtggcaataacaaaagcggtgtctctgagacacttgcgcttaacatgtc 244 ||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 1427 catagttggtggtggcaataacaaaagtggtgtctctgaaacacttgtgcttaatatgtc 1486 Query: 245 aactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgccagtgaggg 304 |||| | |||||||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 1487 aactttaacatggtcagttgttagctctgtagaaggtcgtgttccccttgccagtgaggg 1546 Query: 305 catgactttattgtacagcaattatagcggagaagattatctcatttcttttggaggata 364 |||||||||| || | |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 1547 catgactttagtgcatagcaattacaatggagatgattatctcatttcttttggaggata 1606 Query: 365 caatggacggtacaacaatgaggtgtatgctcttaaactta 405 ||||||||| |||| ||||||||| | |||||||||||||| Sbjct: 1607 caatggacgatacagcaatgaggtctttgctcttaaactta 1647 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 1689 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 1748 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 1749 cgtgagattgccatggacagtgctgattc 1777
>dbj|AK066390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068G09, full insert sequence Length = 1231 Score = 422 bits (213), Expect = e-115 Identities = 354/401 (88%) Strand = Plus / Plus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| || || |||||||| ||||| Sbjct: 46 tgctgcttgccatgctgatcgctatcttttaatttttggtggagggtctcatgcaacatg 105 Query: 65 ttttaatgacctacatgtccttgatttgcagacgatggaatggtcaagacccaaacagca 124 ||| |||||| | |||||||| |||||||| || ||||| ||||||||||||||||| || Sbjct: 106 tttcaatgacttgcatgtcctcgatttgcaaacaatggagtggtcaagacccaaacaaca 165 Query: 125 gggtccaattccaagcccacgagctggtcatgcaggtgcaactgttggggagaattggta 184 ||||| |||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 166 gggtctggctccaagcccacgagctggccatgcaggtgcaaccgttggggaaaactggta 225 Query: 185 cattgttggtggtggcaataacaaaagcggtgtctctgagacacttgcgcttaacatgtc 244 ||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 226 catagttggtggtggcaataacaaaagtggtgtctctgaaacacttgtgcttaatatgtc 285 Query: 245 aactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgccagtgaggg 304 |||| | |||||||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 286 aactttaacatggtcagttgttagctctgtagaaggtcgtgttccccttgccagtgaggg 345 Query: 305 catgactttattgtacagcaattatagcggagaagattatctcatttcttttggaggata 364 |||||||||| || | |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 346 catgactttagtgcatagcaattacaatggagatgattatctcatttcttttggaggata 405 Query: 365 caatggacggtacaacaatgaggtgtatgctcttaaactta 405 ||||||||| |||| ||||||||| | |||||||||||||| Sbjct: 406 caatggacgatacagcaatgaggtctttgctcttaaactta 446 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 488 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 547 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 548 cgtgagattgccatggacagtgctgattc 576
>gb|AY109421.1| Zea mays CL1054_1 mRNA sequence Length = 954 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Plus Query: 242 gtcaactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgccagtga 301 |||||||||| ||||| |||||||||| || || |||||||||||||||||||||||||| Sbjct: 9 gtcaactctgacatggncagttgttagcactgtggaaggacgtgttcctcttgccagtga 68 Query: 302 gggcatgactttattgtacagcaattatagcggagaagattatctcatttcttttggagg 361 ||||||||||||| || | |||||||| | || | ||||||||| | ||||||||||| Sbjct: 69 gggcatgactttagtgcatagcaattacaatggttatgattatctcgtctcttttggagg 128 Query: 362 atacaatggacggtacaacaatgaggtgtatgctcttaaact 403 |||||||||||| |||| ||| ||||| || |||||||||| Sbjct: 129 atacaatggacgatacagcaacgaggtttacactcttaaact 170 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/89 (83%), Gaps = 7/89 (7%) Strand = Plus / Plus Query: 486 gaaatttctcaagatgggaagatacgggagattgccatggacaatgctgattc------g 539 ||||||||||||||||||| ||| | ||| |||||||||||| ||| ||||| | Sbjct: 253 gaaatttctcaagatgggaggatgcacgag-ttgccatggacagtgccgattcagacctg 311 Query: 540 aaaaacagaaatgatgaagcaaatgaaca 568 || ||||||||||||||||||| |||||| Sbjct: 312 aataacagaaatgatgaagcaagtgaaca 340
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Minus Query: 98 gatggaatggtcaagacccaaacagcagggtccaattccaagcccacgagctggtcatgc 157 |||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 34804618 gatggagtggtcaagacccaaacaacagggtctggctccaagcccacgagctggccatgc 34804559 Query: 158 aggtgcaactgttggggagaattggtacattgttggtggtggcaataacaaaag 211 ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 34804558 aggtgcaaccgttggggaaaactggtacatagttggtggtggcaataacaaaag 34804505 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 301 agggcatgactttattgtacagcaattatagcggagaagattatctcatttcttttggag 360 |||||||||||||| || | |||||||| | ||||| |||||||||||||||||||||| Sbjct: 34803758 agggcatgactttagtgcatagcaattacaatggagatgattatctcatttcttttggag 34803699 Query: 361 gatacaatggacggtacaacaatgaggt 388 ||||||||||||| |||| ||||||||| Sbjct: 34803698 gatacaatggacgatacagcaatgaggt 34803671 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 213 ggtgtctctgagacacttgcgcttaacatgtcaactctggcatggtcagttgttagtacc 272 ||||||||||| ||||||| |||||| ||||||||| | |||||||||||||||| | Sbjct: 34803924 ggtgtctctgaaacacttgtgcttaatatgtcaactttaacatggtcagttgttagctct 34803865 Query: 273 gtagaaggacgtgttcctcttgccagtgagg 303 |||||||| |||||||| ||||||||||||| Sbjct: 34803864 gtagaaggtcgtgttccccttgccagtgagg 34803834 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| || || |||||||| ||||| Sbjct: 34804797 tgctgcttgccatgctgatcgctatcttttaatttttggtggagggtctcatgcaacatg 34804738 Query: 65 ttttaatgacctacatgtccttgatttgca 94 ||| |||||| | |||||||| |||||||| Sbjct: 34804737 tttcaatgacttgcatgtcctcgatttgca 34804708 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 34803525 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 34803466 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 34803465 cgtgagattgccatggacagtgctgattc 34803437
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 98 gatggaatggtcaagacccaaacagcagggtccaattccaagcccacgagctggtcatgc 157 |||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 58032 gatggagtggtcaagacccaaacaacagggtctggctccaagcccacgagctggccatgc 58091 Query: 158 aggtgcaactgttggggagaattggtacattgttggtggtggcaataacaaaag 211 ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 58092 aggtgcaaccgttggggaaaactggtacatagttggtggtggcaataacaaaag 58145 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 301 agggcatgactttattgtacagcaattatagcggagaagattatctcatttcttttggag 360 |||||||||||||| || | |||||||| | ||||| |||||||||||||||||||||| Sbjct: 58892 agggcatgactttagtgcatagcaattacaatggagatgattatctcatttcttttggag 58951 Query: 361 gatacaatggacggtacaacaatgaggt 388 ||||||||||||| |||| ||||||||| Sbjct: 58952 gatacaatggacgatacagcaatgaggt 58979 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 213 ggtgtctctgagacacttgcgcttaacatgtcaactctggcatggtcagttgttagtacc 272 ||||||||||| ||||||| |||||| ||||||||| | |||||||||||||||| | Sbjct: 58726 ggtgtctctgaaacacttgtgcttaatatgtcaactttaacatggtcagttgttagctct 58785 Query: 273 gtagaaggacgtgttcctcttgccagtgagg 303 |||||||| |||||||| ||||||||||||| Sbjct: 58786 gtagaaggtcgtgttccccttgccagtgagg 58816 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| || || |||||||| ||||| Sbjct: 57853 tgctgcttgccatgctgatcgctatcttttaatttttggtggagggtctcatgcaacatg 57912 Query: 65 ttttaatgacctacatgtccttgatttgca 94 ||| |||||| | |||||||| |||||||| Sbjct: 57913 tttcaatgacttgcatgtcctcgatttgca 57942 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 59125 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 59184 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 59185 cgtgagattgccatggacagtgctgattc 59213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Minus Query: 98 gatggaatggtcaagacccaaacagcagggtccaattccaagcccacgagctggtcatgc 157 |||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 34894690 gatggagtggtcaagacccaaacaacagggtctggctccaagcccacgagctggccatgc 34894631 Query: 158 aggtgcaactgttggggagaattggtacattgttggtggtggcaataacaaaag 211 ||||||||| |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 34894630 aggtgcaaccgttggggaaaactggtacatagttggtggtggcaataacaaaag 34894577 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 301 agggcatgactttattgtacagcaattatagcggagaagattatctcatttcttttggag 360 |||||||||||||| || | |||||||| | ||||| |||||||||||||||||||||| Sbjct: 34893830 agggcatgactttagtgcatagcaattacaatggagatgattatctcatttcttttggag 34893771 Query: 361 gatacaatggacggtacaacaatgaggt 388 ||||||||||||| |||| ||||||||| Sbjct: 34893770 gatacaatggacgatacagcaatgaggt 34893743 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 213 ggtgtctctgagacacttgcgcttaacatgtcaactctggcatggtcagttgttagtacc 272 ||||||||||| ||||||| |||||| ||||||||| | |||||||||||||||| | Sbjct: 34893996 ggtgtctctgaaacacttgtgcttaatatgtcaactttaacatggtcagttgttagctct 34893937 Query: 273 gtagaaggacgtgttcctcttgccagtgagg 303 |||||||| |||||||| ||||||||||||| Sbjct: 34893936 gtagaaggtcgtgttccccttgccagtgagg 34893906 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 5 tgctgcttgccatgctgaccgctaccttctaatttttggcgggggatctcatgcgacatg 64 |||||||||||||||||| ||||| ||| |||||||||| || || |||||||| ||||| Sbjct: 34894869 tgctgcttgccatgctgatcgctatcttttaatttttggtggagggtctcatgcaacatg 34894810 Query: 65 ttttaatgacctacatgtccttgatttgca 94 ||| |||||| | |||||||| |||||||| Sbjct: 34894809 tttcaatgacttgcatgtcctcgatttgca 34894780 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 450 tcagatagtacgtctagggtgctggaacctgaggttgaaatttctcaagatgggaagata 509 |||||| |||| || || || |||||||| ||||||||| ||||||| ||||||||||| Sbjct: 34893597 tcagatggtacatccagcgttctggaacccgaggttgaactttctcatgatgggaagatc 34893538 Query: 510 cgggagattgccatggacaatgctgattc 538 || |||||||||||||||| ||||||||| Sbjct: 34893537 cgtgagattgccatggacagtgctgattc 34893509
>dbj|AK100499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099E22, full insert sequence Length = 2108 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 39 tttggcgggggatctcatgcgacatgttttaatgacctacatgtccttgatttgcagacg 98 ||||||||||| |||||| | |||||||| | ||| |||||| ||||||| |||||||| Sbjct: 993 tttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacg 1052 Query: 99 atggaatggtcaagacccaaacagcagggt 128 ||||||||||||||||| |||| |||||| Sbjct: 1053 atggaatggtcaagaccagaacatcagggt 1082 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 354 tttggaggatacaatggacggtacaacaatgaggtgtatgctct 397 ||||||||||||| |||||| |||| |||||| | |||||||| Sbjct: 1308 tttggaggatacagtggacgttacagtaatgagatttatgctct 1351
>ref|NM_122645.3| Arabidopsis thaliana acyl-CoA binding AT5G27630 mRNA, complete cds Length = 2772 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 18 gctgaccgctaccttctaatttttggcgggggatctcatgcgacatgttttaatgaccta 77 ||||| || ||||||||||| ||||| || ||||| ||||| || |||||| |||| || Sbjct: 1144 gctgagcgttaccttctaatctttggtggaggatcacatgcaacttgttttgatgatctg 1203 Query: 78 catgtccttgatttgcagacgatggaatggtcaagac 114 || ||||||||| |||| || |||||||||||||||| Sbjct: 1204 cacgtccttgatctgcaaactatggaatggtcaagac 1240 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 169 ttggggagaattggtacattgttggtggtggcaataacaaaagcggtgtctctgagacac 228 ||||||| |||||||| |||||||||||||| ||||||||||||| | ||| |||| Sbjct: 1295 ttggggaaaattggtatattgttggtggtggagataacaaaagcggggcatctaagactg 1354 Query: 229 ttgcgcttaacatgtcaactctggcatggtcagttgt 265 ||| | || ||||||||||| |||||||||||||| Sbjct: 1355 ttgtattaaatatgtcaactcttgcatggtcagttgt 1391 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaacaatgaggtgtatgctcttaaac 402 ||||||| |||||||| |||| ||||||||||| ||| ||| |||||||| Sbjct: 1478 cttttggtggatacaacggacattacaacaatgaagtgaatgttcttaaac 1528
>gb|BT008399.1| Arabidopsis thaliana At5g27630 gene, complete cds Length = 1947 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 18 gctgaccgctaccttctaatttttggcgggggatctcatgcgacatgttttaatgaccta 77 ||||| || ||||||||||| ||||| || ||||| ||||| || |||||| |||| || Sbjct: 1066 gctgagcgttaccttctaatctttggtggaggatcacatgcaacttgttttgatgatctg 1125 Query: 78 catgtccttgatttgcagacgatggaatggtcaagac 114 || ||||||||| |||| || |||||||||||||||| Sbjct: 1126 cacgtccttgatctgcaaactatggaatggtcaagac 1162 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 169 ttggggagaattggtacattgttggtggtggcaataacaaaagcggtgtctctgagacac 228 ||||||| |||||||| |||||||||||||| ||||||||||||| | ||| |||| Sbjct: 1217 ttggggaaaattggtatattgttggtggtggagataacaaaagcggggcatctaagactg 1276 Query: 229 ttgcgcttaacatgtcaactctggcatggtcagttgt 265 ||| | || ||||||||||| |||||||||||||| Sbjct: 1277 ttgtattaaatatgtcaactcttgcatggtcagttgt 1313 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaacaatgaggtgtatgctcttaaac 402 ||||||| |||||||| |||| ||||||||||| ||| ||| |||||||| Sbjct: 1400 cttttggtggatacaacggacattacaacaatgaagtgaatgttcttaaac 1450
>gb|AY093156.1| Arabidopsis thaliana unknown protein (At5g27630) mRNA, complete cds Length = 2247 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 18 gctgaccgctaccttctaatttttggcgggggatctcatgcgacatgttttaatgaccta 77 ||||| || ||||||||||| ||||| || ||||| ||||| || |||||| |||| || Sbjct: 1144 gctgagcgttaccttctaatctttggtggaggatcacatgcaacttgttttgatgatctg 1203 Query: 78 catgtccttgatttgcagacgatggaatggtcaagac 114 || ||||||||| |||| || |||||||||||||||| Sbjct: 1204 cacgtccttgatctgcaaactatggaatggtcaagac 1240 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 169 ttggggagaattggtacattgttggtggtggcaataacaaaagcggtgtctctgagacac 228 ||||||| |||||||| |||||||||||||| ||||||||||||| | ||| |||| Sbjct: 1295 ttggggaaaattggtatattgttggtggtggagataacaaaagcggggcatctaagactg 1354 Query: 229 ttgcgcttaacatgtcaactctggcatggtcagttgt 265 ||| | || ||||||||||| |||||||||||||| Sbjct: 1355 ttgtattaaatatgtcaactcttgcatggtcagttgt 1391 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaacaatgaggtgtatgctcttaaac 402 ||||||| |||||||| |||| ||||||||||| ||| ||| |||||||| Sbjct: 1478 cttttggtggatacaacggacattacaacaatgaagtgaatgttcttaaac 1528
>ref|NM_111415.3| Arabidopsis thaliana acyl-CoA binding AT3G05420 transcript variant AT3G05420.1 mRNA, complete cds Length = 2312 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 29 ccttctaatttttggcgggggatctcatgcgacatgttttaatgacctacatgtccttga 88 |||||| || ||||| || || || ||||| || ||||| ||||||| ||||||||||| Sbjct: 1176 ccttcttatctttggtggcggctcacatgcaacctgtttcgatgacctgcatgtccttga 1235 Query: 89 tttgcagacgatggaatggtcaagacc 115 |||||| || ||||| ||||||||||| Sbjct: 1236 tttgcaaactatggagtggtcaagacc 1262 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaa 379 ||||||| |||||||||||||| ||||| Sbjct: 1499 cttttggtggatacaatggacgttacaa 1526 Score = 40.1 bits (20), Expect = 8.1 Identities = 56/68 (82%) Strand = Plus / Plus Query: 237 aacatgtcaactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgcc 296 |||||||||||||| |||||||| || ||| | | || |||||||||| |||||||| Sbjct: 1384 aacatgtcaactcttgcatggtcggtcgttgcttcagttcaaggacgtgtacctcttgct 1443 Query: 297 agtgaggg 304 || ||||| Sbjct: 1444 agcgaggg 1451
>ref|NM_202498.1| Arabidopsis thaliana acyl-CoA binding AT3G05420 transcript variant AT3G05420.2 mRNA, complete cds Length = 2315 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 29 ccttctaatttttggcgggggatctcatgcgacatgttttaatgacctacatgtccttga 88 |||||| || ||||| || || || ||||| || ||||| ||||||| ||||||||||| Sbjct: 1179 ccttcttatctttggtggcggctcacatgcaacctgtttcgatgacctgcatgtccttga 1238 Query: 89 tttgcagacgatggaatggtcaagacc 115 |||||| || ||||| ||||||||||| Sbjct: 1239 tttgcaaactatggagtggtcaagacc 1265 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaa 379 ||||||| |||||||||||||| ||||| Sbjct: 1502 cttttggtggatacaatggacgttacaa 1529 Score = 40.1 bits (20), Expect = 8.1 Identities = 56/68 (82%) Strand = Plus / Plus Query: 237 aacatgtcaactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgcc 296 |||||||||||||| |||||||| || ||| | | || |||||||||| |||||||| Sbjct: 1387 aacatgtcaactcttgcatggtcggtcgttgcttcagttcaaggacgtgtacctcttgct 1446 Query: 297 agtgaggg 304 || ||||| Sbjct: 1447 agcgaggg 1454
>gb|BT006458.1| Arabidopsis thaliana At3g05420 gene, complete cds Length = 2007 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 29 ccttctaatttttggcgggggatctcatgcgacatgttttaatgacctacatgtccttga 88 |||||| || ||||| || || || ||||| || ||||| ||||||| ||||||||||| Sbjct: 1074 ccttcttatctttggtggcggctcacatgcaacctgtttcgatgacctgcatgtccttga 1133 Query: 89 tttgcagacgatggaatggtcaagacc 115 |||||| || ||||| ||||||||||| Sbjct: 1134 tttgcaaactatggagtggtcaagacc 1160 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cttttggaggatacaatggacggtacaa 379 ||||||| |||||||||||||| ||||| Sbjct: 1397 cttttggtggatacaatggacgttacaa 1424 Score = 40.1 bits (20), Expect = 8.1 Identities = 56/68 (82%) Strand = Plus / Plus Query: 237 aacatgtcaactctggcatggtcagttgttagtaccgtagaaggacgtgttcctcttgcc 296 |||||||||||||| |||||||| || ||| | | || |||||||||| |||||||| Sbjct: 1282 aacatgtcaactcttgcatggtcggtcgttgcttcagttcaaggacgtgtacctcttgct 1341 Query: 297 agtgaggg 304 || ||||| Sbjct: 1342 agcgaggg 1349
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 169 ttggggagaattggtacattgttggtggtggcaataacaaaagcggt 215 ||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 88408 ttggggaaaattggtatattgttggtggtggagataacaaaagcggt 88454 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 18 gctgaccgctaccttctaatttttggcgggggatctcatgcgacatgttttaatgaccta 77 ||||| || ||||||||||| ||||| || ||||| ||||| || |||||| |||| || Sbjct: 88186 gctgagcgttaccttctaatctttggtggaggatcacatgcaacttgttttgatgatctg 88245 Query: 78 catgtccttgatttgca 94 || ||||||||| |||| Sbjct: 88246 cacgtccttgatctgca 88262 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 atgtcaactctggcatggtcagttgt 265 ||||||||||| |||||||||||||| Sbjct: 88651 atgtcaactcttgcatggtcagttgt 88676
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 349 tttcttttggaggatacaatggacggtacaaca 381 ||||||||||||||||||||||||| ||||||| Sbjct: 95237 tttcttttggaggatacaatggacgttacaaca 95205 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 ggggagaattggtacattgttggtggtgg 199 |||||||| |||| ||||||||||||||| Sbjct: 96772 ggggagaactggttcattgttggtggtgg 96744
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tgttgctgcttgccatgctgaccg 25 |||||||||||||||||||||||| Sbjct: 624464 tgttgctgcttgccatgctgaccg 624487
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 39 tttggcgggggatctcatgcgacatgttttaatgacctacatgtccttgatttgcagacg 98 ||||||||||| |||||| | |||||||| | ||| |||||| ||||||| |||||||| Sbjct: 21655619 tttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacg 21655678
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2 tgttgctgcttgccatgctgaccg 25 |||||||||||||||||||||||| Sbjct: 647663 tgttgctgcttgccatgctgaccg 647686
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 39 tttggcgggggatctcatgcgacatgttttaatgacctacatgtccttgatttgcagacg 98 ||||||||||| |||||| | |||||||| | ||| |||||| ||||||| |||||||| Sbjct: 21583964 tttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacg 21584023
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Minus Query: 39 tttggcgggggatctcatgcgacatgttttaatgacctacatgtccttgatttgcagacg 98 ||||||||||| |||||| | |||||||| | ||| |||||| ||||||| |||||||| Sbjct: 156932 tttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacg 156873
>ref|XM_746724.1| Aspergillus fumigatus Af293 GABA permease (Afu4g10090) partial mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 ttgttggtggtggcaataacaa 208 |||||||||||||||||||||| Sbjct: 613 ttgttggtggtggcaataacaa 634
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 29 ccttctaatttttggcgggggatctcatgcgacatgttttaatgacctacatgtccttga 88 |||||| || ||||| || || || ||||| || ||||| ||||||| ||||||||||| Sbjct: 55774 ccttcttatctttggtggcggctcacatgcaacctgtttcgatgacctgcatgtccttga 55715 Query: 89 tttgca 94 |||||| Sbjct: 55714 tttgca 55709 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 cttttggaggatacaatggacggtacaa 379 ||||||| |||||||||||||| ||||| Sbjct: 55095 cttttggtggatacaatggacgttacaa 55068
>gb|BC085651.1| Danio rerio zgc:92209, mRNA (cDNA clone MGC:92209 IMAGE:7052019), complete cds Length = 2540 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 gtacattgttggtggtggcaat 203 |||||||||||||||||||||| Sbjct: 124 gtacattgttggtggtggcaat 103
>ref|NM_001007765.1| Danio rerio zgc:92209 (zgc:92209), mRNA Length = 2540 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 gtacattgttggtggtggcaat 203 |||||||||||||||||||||| Sbjct: 124 gtacattgttggtggtggcaat 103
>gb|AC164980.3| Mus musculus BAC clone RP23-184C3 from chromosome 7, complete sequence Length = 218755 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 101377 gaccaagccacctcagatagt 101397
>gb|AC166326.2| Mus musculus BAC clone RP23-259L9 from chromosome 7, complete sequence Length = 145876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 71554 gaccaagccacctcagatagt 71574
>gb|AC130719.3| Mus musculus BAC clone RP24-107M5 from chromosome 7, complete sequence Length = 143584 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 140881 gaccaagccacctcagatagt 140901 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 93477 gaccaagccacctcagatagt 93497
>gb|AC133085.4| Mus musculus BAC clone RP24-371M11 from chromosome 7, complete sequence Length = 145983 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 83098 gaccaagccacctcagatagt 83078
>gb|AC167332.2| Mus musculus BAC clone RP24-165A19 from chromosome 7, complete sequence Length = 149702 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 82727 gaccaagccacctcagatagt 82747
>gb|AC142453.3| Mus musculus BAC clone RP23-398A2 from chromosome 7, complete sequence Length = 188249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 152646 gaccaagccacctcagatagt 152666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 105242 gaccaagccacctcagatagt 105262
>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete sequence Length = 189557 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 aacagaaatgatgaagcaaatgaac 567 ||||||||||||||| ||||||||| Sbjct: 170312 aacagaaatgatgaaacaaatgaac 170288
>gb|AC127324.4| Mus musculus BAC clone RP23-244I2 from chromosome 7, complete sequence Length = 176387 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 148680 gaccaagccacctcagatagt 148660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 121052 gaccaagccacctcagatagt 121032
>gb|AC130208.3| Mus musculus BAC clone RP24-352L7 from chromosome 7, complete sequence Length = 154237 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 102622 gaccaagccacctcagatagt 102602
>gb|AC126273.3| Mus musculus BAC clone RP23-99P15 from 7, complete sequence Length = 182698 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 162544 gaccaagccacctcagatagt 162524 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 83164 gaccaagccacctcagatagt 83144
>gb|AC124545.4| Mus musculus BAC clone RP23-272D9 from 7, complete sequence Length = 169442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 18736 gaccaagccacctcagatagt 18716
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 agaaatgatgaagcaaatgaa 566 ||||||||||||||||||||| Sbjct: 84381 agaaatgatgaagcaaatgaa 84401
>gb|AC157595.4| Mus musculus BAC clone RP23-238F18 from chromosome 7, complete sequence Length = 196922 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 9452 gaccaagccacctcagatagt 9472
>gb|AC157603.4| Mus musculus BAC clone RP23-55O6 from chromosome 7, complete sequence Length = 151519 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 105145 gaccaagccacctcagatagt 105165
>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence Length = 165022 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 aaaaacagaaatgatgaagca 560 ||||||||||||||||||||| Sbjct: 113751 aaaaacagaaatgatgaagca 113731
>gb|AC005561.3| Arabidopsis thaliana chromosome 2 clone T9F8 map mi310, complete sequence Length = 90859 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 acgggagattgccatggacaatgct 533 |||||| |||||||||||||||||| Sbjct: 50593 acgggaaattgccatggacaatgct 50569
>ref|NM_079051.2| Drosophila melanogaster Misexpression suppressor of ras 4 CG4903-RA (MESR4), mRNA Length = 6687 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcaggtgcaactgttgggga 175 ||||||||||||||||||||| Sbjct: 2441 tgcaggtgcaactgttgggga 2421
>gb|AC156566.3| Mus musculus BAC clone RP23-337B16 from chromosome 7, complete sequence Length = 198071 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 187965 gaccaagccacctcagatagt 187945
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcaggtgcaactgttgggga 175 ||||||||||||||||||||| Sbjct: 142847 tgcaggtgcaactgttgggga 142827
>gb|AF195494.1|AF195494 Drosophila melanogaster Misexpression suppressor of ras 4 (MESR4) mRNA, MESR4-0386 allele, complete cds Length = 3537 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcaggtgcaactgttgggga 175 ||||||||||||||||||||| Sbjct: 2441 tgcaggtgcaactgttgggga 2421
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcaggtgcaactgttgggga 175 ||||||||||||||||||||| Sbjct: 285864 tgcaggtgcaactgttgggga 285844
>gb|AC172890.2| Mus musculus BAC clone RP24-337A4 from chromosome 7, complete sequence Length = 182879 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 146472 gaccaagccacctcagatagt 146452
>gb|AC114925.6| Mus musculus BAC clone RP24-349O21 from 16, complete sequence Length = 150121 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 543 aacagaaatgatgaagcaaatgaac 567 ||||||||||||||| ||||||||| Sbjct: 141812 aacagaaatgatgaaacaaatgaac 141836
>gb|AC127238.5| Mus musculus BAC clone RP24-378P20 from 7, complete sequence Length = 224224 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 205915 gaccaagccacctcagatagt 205895
>gb|AC150684.2| Mus musculus BAC clone RP23-268G6 from 7, complete sequence Length = 193525 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 187802 gaccaagccacctcagatagt 187782 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 108422 gaccaagccacctcagatagt 108402
>gb|AC173484.2| Mus musculus BAC clone RP23-250N1 from chromosome 7, complete sequence Length = 207692 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 86549 gaccaagccacctcagatagt 86529
>gb|AC145553.4| Mus musculus BAC clone RP23-106M1 from 7, complete sequence Length = 188631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 133051 gaccaagccacctcagatagt 133031 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 47319 gaccaagccacctcagatagt 47299
>gb|AC173478.1| Mus musculus BAC clone RP24-81N9 from chromosome 7, complete sequence Length = 208133 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 135772 gaccaagccacctcagatagt 135752 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 88369 gaccaagccacctcagatagt 88349
>gb|AC172366.1| Mus musculus BAC clone RP24-499J10 from chromosome 7, complete sequence Length = 171297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 143729 gaccaagccacctcagatagt 143749
>gb|AC171001.2| Mus musculus BAC clone RP23-317I13 from chromosome 7, complete sequence Length = 183576 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gaccaagccacctcagatagt 458 ||||||||||||||||||||| Sbjct: 106415 gaccaagccacctcagatagt 106435
>gb|AC166341.3| Mus musculus BAC clone RP23-430C21 from chromosome 12, complete sequence Length = 196418 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 acctgaggttgaaatttctcaaga 499 ||||||||||||||||| |||||| Sbjct: 66971 acctgaggttgaaatttttcaaga 66994
>ref|XM_521203.1| PREDICTED: Pan troglodytes similar to Nck-interacting kinase-like embryo specific kinase (LOC465790), mRNA Length = 6646 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 gaagcaaatgaacaactctt 574 |||||||||||||||||||| Sbjct: 5950 gaagcaaatgaacaactctt 5969
>gb|AC160962.2| Mus musculus BAC clone RP24-308N16 from chromosome 13, complete sequence Length = 147866 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgtgttcctcttgccagtga 301 |||||||||||||||||||| Sbjct: 131353 cgtgttcctcttgccagtga 131372
>gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromosome 7, complete sequence Length = 205916 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tacattgttggtggtggcaa 202 |||||||||||||||||||| Sbjct: 168553 tacattgttggtggtggcaa 168534
>gb|AC153794.6| Mus musculus BAC clone RP23-128I24 from chromosome 12, complete sequence Length = 208105 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 acctgaggttgaaatttctcaaga 499 ||||||||||||||||| |||||| Sbjct: 35451 acctgaggttgaaatttttcaaga 35428
>gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complete sequence Length = 126643 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tacattgttggtggtggcaa 202 |||||||||||||||||||| Sbjct: 112658 tacattgttggtggtggcaa 112677
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aatggtcaagacccaaacag 122 |||||||||||||||||||| Sbjct: 11004 aatggtcaagacccaaacag 10985
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence Length = 248166 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 acctgaggttgaaatttctcaaga 499 ||||||||||||||||| |||||| Sbjct: 187219 acctgaggttgaaatttttcaaga 187196
>ref|NM_198465.1| Homo sapiens Nik related kinase (NRK), mRNA Length = 8082 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 gaagcaaatgaacaactctt 574 |||||||||||||||||||| Sbjct: 4755 gaagcaaatgaacaactctt 4774
>emb|Z83850.1|HS82J11 Human DNA sequence from clone RP1-82J11 on chromosome Xq22, complete sequence Length = 132981 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 gaagcaaatgaacaactctt 574 |||||||||||||||||||| Sbjct: 40178 gaagcaaatgaacaactctt 40197
>emb|AL606752.11| Human DNA sequence from clone RP11-740C1 on chromosome 1 Contains the OR10J5 gene for olfactory receptor family 10 subfamily J member 5 and an amyloid P component serum (APCS) pseudogene, complete sequence Length = 87134 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 agaaatgatgaagcaaatga 565 |||||||||||||||||||| Sbjct: 55417 agaaatgatgaagcaaatga 55398
>emb|AL359957.44| Human DNA sequence from clone RP11-62O22 on chromosome 10 Contains part of a novel gene (KIAA0934) and a CpG island, complete sequence Length = 137511 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 agcacacaggaccaagccacctca 452 |||||||||||| ||||||||||| Sbjct: 30498 agcacacaggacaaagccacctca 30521
>emb|BX538345.1|HSM806621 Homo sapiens mRNA; cDNA DKFZp686A17109 (from clone DKFZp686A17109); complete cds Length = 8082 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 gaagcaaatgaacaactctt 574 |||||||||||||||||||| Sbjct: 4755 gaagcaaatgaacaactctt 4774
>gb|AC159633.2| Mus musculus BAC clone RP24-159L15 from chromosome 12, complete sequence Length = 188757 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agaattggtacattgttggtggtg 198 |||||||||||| ||||||||||| Sbjct: 132581 agaattggtacagtgttggtggtg 132604
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatggtcaagacccaaacag 122 |||||||||||||||||||| Sbjct: 10366 aatggtcaagacccaaacag 10385
>gb|AC004803.11| Homo sapiens 12 BAC RP11-359B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154369 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 aaatgatgaagcaaatgaac 567 |||||||||||||||||||| Sbjct: 99328 aaatgatgaagcaaatgaac 99309
>gb|AC130466.2| Homo sapiens chromosome 16 clone CTC-591M7, complete sequence Length = 106998 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 tgttggtggtggcaataacaaaag 211 |||||| ||||||||||||||||| Sbjct: 68200 tgttgggggtggcaataacaaaag 68223
>gb|AF262040.1|T10I18 Arabidopsis thaliana BAC T10I18 Length = 66542 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 acgggagattgccatggacaatgc 532 |||||| ||||||||||||||||| Sbjct: 56261 acgggaaattgccatggacaatgc 56238
>emb|AJ241753.1|LRE241753 Lactobacillus reuteri 16S rRNA gene, partial, clone *Cow2 Length = 360 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tacaatggacggtacaacaa 382 |||||||||||||||||||| Sbjct: 124 tacaatggacggtacaacaa 143
>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete sequence Length = 192154 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 aacagaaatgatgaagcaaatgaa 566 ||||||||||||||| |||||||| Sbjct: 117588 aacagaaatgatgaaacaaatgaa 117565
>emb|CT030242.6| Mouse DNA sequence from clone RP24-66D20 on chromosome 12, complete sequence Length = 193557 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 acctgaggttgaaatttctcaaga 499 ||||||||||||||||||| |||| Sbjct: 84188 acctgaggttgaaatttctgaaga 84165
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aaatgatgaagcaaatgaac 567 |||||||||||||||||||| Sbjct: 13713 aaatgatgaagcaaatgaac 13732
>dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11D15, TM0065, complete sequence Length = 115046 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aaatgatgaagcaaatgaac 567 |||||||||||||||||||| Sbjct: 113787 aaatgatgaagcaaatgaac 113806
>gb|AC153695.2| Mus musculus 10 BAC RP23-184L5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse 10 BAC Library) complete sequence Length = 209875 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatggtcaagacccaaacag 122 |||||||||||||||||||| Sbjct: 152383 aatggtcaagacccaaacag 152402
>gb|U19725.1|BTU19725 Bacillus thuringiensis PS86Q3 delta endotoxin gene, partial cds Length = 3735 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gtacattgttggtggtggcaataa 205 ||||| |||||||||||||||||| Sbjct: 2598 gtacagtgttggtggtggcaataa 2575 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,359,434 Number of Sequences: 3902068 Number of extensions: 5359434 Number of successful extensions: 97521 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97105 Number of HSP's gapped (non-prelim): 408 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)