| Clone Name | bags17b21 |
|---|---|
| Clone Library Name | barley_pub |
>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]| Length = 133 Score = 60.5 bits (145), Expect = 3e-09 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%) Frame = +1 Query: 64 KTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISN 243 KT+ + ++++ LV + Q +A CC Y CR + ++++ C +S I + Sbjct: 4 KTVILGVIIMSLVMAQN--QVEAKICCPRTIDRNIYNACRL-TGASMTNCANLSGCKIVS 60 Query: 244 DAGTECKSGYI-DIEKVSLQAVN-YCKLGCTASLCNKVTPSGND-------AMERCTSEC 396 GT C GY DI + AVN YCKLGC +S+C +T N A+ +CT+ C Sbjct: 61 --GTTCPPGYTHDILQNYGDAVNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNAC 118 Query: 397 HDLCTKNGVEIAQ 435 + CTK ++ + Sbjct: 119 SNFCTKGSAKVVE 131
>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic| protein] Length = 134 Score = 59.7 bits (143), Expect = 5e-09 Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Frame = +1 Query: 64 KTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISN 243 KT+ LL++ LV + Q +A CC D YF C S S+ + N Sbjct: 4 KTVISSLLIMSLVLAQI--QVEAKICCPTKDDRSVYFVCML---SVSSQFYCLLKSKCKN 58 Query: 244 DAGTECKSGYI-DIEKVSLQAVN-YCKLGCTASLCNKVTPSGN--------DAMERCTSE 393 + T C GY DI + S AVN YCKLGC +S+C +T N +A+E+CT Sbjct: 59 TSQTICPPGYTNDILENSGDAVNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKA 118 Query: 394 CHDLCT 411 C +CT Sbjct: 119 CSSVCT 124
>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable| thionin-2.3; Acidic protein] Length = 135 Score = 56.6 bits (135), Expect = 4e-08 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 10/136 (7%) Frame = +1 Query: 64 KTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISN 243 KT+ +LV+GLV + +AQ + CC + + DC S+ + C +G Sbjct: 4 KTVIFSVLVMGLVISQIQVEAQKT-CCPSQSTRKEFEDCI--SEGNLQILCSAESGCRDT 60 Query: 244 DAGTECKSGY-IDIEKVSLQAVN-YCKLGCTASLC------NKVTPSG--NDAMERCTSE 393 G C SG+ S VN YCKLGC +SLC K+ SG N A+ERCT Sbjct: 61 YVGY-CPSGFPYGSLTNSGDVVNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKA 119 Query: 394 CHDLCTKNGVEIAQVV 441 C +CTK + V Sbjct: 120 CSTICTKGSKTAVETV 135
>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable| thionin-2.4; Acidic protein] Length = 134 Score = 49.3 bits (116), Expect = 6e-06 Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 13/136 (9%) Frame = +1 Query: 64 KTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISN 243 KTL + +L++ L + Q A+ CC + + Y C S S S IS Sbjct: 4 KTLIVSVLIMSLFMAQN--QVDANICCPSIQARTFYNACLFAVGSPSSCIRNSSCLDISE 61 Query: 244 DAGTECKSGYID--IEKVSLQAVNYCKLGCTASLCNKVT--------PSGNDAMERCTSE 393 C GY + +E YCKLGC +S+C +T N +E+CT Sbjct: 62 ST---CPRGYTNDILENTGDAVTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMA 118 Query: 394 CHDLCTK---NGVEIA 432 C +CTK N VE A Sbjct: 119 CSTVCTKGSMNAVENA 134
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 44.3 bits (103), Expect = 2e-04 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Frame = +1 Query: 82 LLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTEC 261 LL+LGLV + Q + CC Y CRA+ + C GV IS+ G C Sbjct: 2 LLILGLVLEQL--QVEGKSCCRSTLGRNCYNLCRARGAQKL--CAGVCRCKISS--GLSC 55 Query: 262 KSGYIDIEKVSLQA-------VNYCKLGCTASLCNKVTPSGND------AMERCTSECHD 402 G+ K++L++ + YC LGC +S+C+ + + D +E C C Sbjct: 56 PKGF---PKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVS 112 Query: 403 LC 408 C Sbjct: 113 FC 114
>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic| protein] Length = 134 Score = 43.5 bits (101), Expect = 4e-04 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 10/130 (7%) Frame = +1 Query: 64 KTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISN 243 + L + LL++ LV + Q +A CC + Y CR + C VS G ++ Sbjct: 4 RILILSLLIMSLVMAQ--VQVEAKICCPSNQARNGYSVCRIRFSK--GRCMQVS-GCQNS 58 Query: 244 DAGTECKSGYID-IEKVSLQAVN-YCKLGCTASLCNKVTPSGND--------AMERCTSE 393 D C G+++ I + S A N +CKLGC S+C + N A E+C Sbjct: 59 DT---CPRGWVNAILENSADATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKG 115 Query: 394 CHDLCTKNGV 423 C CTK+ V Sbjct: 116 CSIFCTKSYV 125
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 43.5 bits (101), Expect = 4e-04 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 10/131 (7%) Frame = +1 Query: 46 MRGNNVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVS 225 M +K + + LL+LGLV +E Q + CC Y CR + + C + Sbjct: 1 MGSKGLKGVMVCLLILGLV-LEHVQ-VEGKSCCRSTLGRNCYNLCRVRG---AQKLCA-N 54 Query: 226 AGYISNDAGTECKSGYIDIEKVSLQ----AVNYCKLGCTASLCNKVTPSGND------AM 375 A +G +C S + + VS ++YC LGC AS+C+ + + D + Sbjct: 55 ACRCKLTSGLKCPSSFPKLALVSNSDEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYV 114 Query: 376 ERCTSECHDLC 408 E C+ C + C Sbjct: 115 EHCSDACVNFC 125
>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:| Alpha-hordothionin; Acidic protein] Length = 127 Score = 43.1 bits (100), Expect = 5e-04 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Frame = +1 Query: 82 LLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTEC 261 LL+LGLV + Q + CC Y CR + + C GV +++ +C Sbjct: 4 LLILGLVLEQ--VQVEGKSCCRSTLGRNCYNLCRVRGAQKL--CAGVCRCKLTSSG--KC 57 Query: 262 KSGYIDIEKVSLQ----AVNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 408 +G+ + VS V YC LGC AS+C+ + + D +E C C + C Sbjct: 58 PTGFPKLALVSNSDEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFC 116
>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)| (Beta-purothionin) [Contains: Purothionin A-1; Acidic protein] Length = 136 Score = 42.0 bits (97), Expect = 0.001 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 9/130 (6%) Frame = +1 Query: 46 MRGNNVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVS 225 M +K + + LL+LGLV + Q + CC Y CRA+ + C V Sbjct: 1 MGSKGLKGVMVCLLILGLVLEQ--VQVEGKSCCKSTLGRNCYNLCRARGAQKL--CANVC 56 Query: 226 AGYISNDAGTECKSGYIDIEKVSLQA-------VNYCKLGCTASLCNKVTPSGND--AME 378 +++ G C D K+ L++ + YC LGC +SLC+ + + D M+ Sbjct: 57 RCKLTS--GLSCPK---DFPKLVLESNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMK 111 Query: 379 RCTSECHDLC 408 +C D C Sbjct: 112 LYVEQCGDAC 121
>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic| protein] Length = 111 Score = 42.0 bits (97), Expect = 0.001 Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 1/117 (0%) Frame = +1 Query: 61 VKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYIS 240 V+ +++LLVL L A+ Q ++ CC + Y CR + + C +S I Sbjct: 4 VRGSSLVLLVLLLGAL-LVSQVESKSCCPNTTGRNIYNACRL-TGAPRPTCAKLSGCKII 61 Query: 241 NDAGTECKSGYIDIEKVSLQAVNYCKLGCTASLCNKVTPSGNDA-MERCTSECHDLC 408 + G+ C S Y YC LGC +S C T S DA RC + C DLC Sbjct: 62 S--GSTCPSDYPKF---------YCTLGCESSQC--ATNSNGDAEAVRCKTACSDLC 105
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 41.2 bits (95), Expect = 0.002 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 9/139 (6%) Frame = +1 Query: 58 NVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYI 237 ++K++ + +L+LGLV + Q +A CC + Y CR S C + G Sbjct: 6 SIKSVVICVLILGLVLEQ--VQVEAKSCCKNTTGRNCYNACRFAGGSR--PVCATACG-C 60 Query: 238 SNDAGTECKSGYIDI----EKVSLQAVNYCKLGCTASLCNKV--TPSGNDA---MERCTS 390 +G C Y + E A YC +GC S+C+ + G + M C++ Sbjct: 61 KIISGPTCPRDYPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSN 120 Query: 391 ECHDLCTKNGVEIAQVVVA 447 C C N E+ Q V A Sbjct: 121 ACARFC--NDGEVIQSVEA 137
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 40.8 bits (94), Expect = 0.002 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 13/134 (9%) Frame = +1 Query: 46 MRGNNVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSD----STVSEC 213 M +K + + LL+LGLV + Q + CC Y CR++ STV C Sbjct: 1 MGSKGLKGVMVCLLILGLVLEQ--VQVEGKSCCRTTLGRNCYNLCRSRGAQKLCSTVCRC 58 Query: 214 CGVSAGYISNDAGTECKSGYIDIEKVSLQA-------VNYCKLGCTASLCNKVTPSGND- 369 S G C G+ K++L++ + YC LGC +S+C+ + + D Sbjct: 59 KLTS--------GLSCPKGF---PKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADD 107 Query: 370 -AMERCTSECHDLC 408 M+ C D C Sbjct: 108 EEMKLYVENCGDAC 121
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 38.1 bits (87), Expect = 0.015 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 9/139 (6%) Frame = +1 Query: 58 NVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYI 237 ++K++ + +L+LGLV + Q + CC + Y CR S C + G Sbjct: 6 SIKSVVICVLILGLVLEQ--VQVEGKSCCKNTTGRNCYNACRFAGGSR--PVCATACG-C 60 Query: 238 SNDAGTECKSGYIDI----EKVSLQAVNYCKLGCTASLCNKV--TPSGNDA---MERCTS 390 +G C Y + E YC +GC S+C+ + G + M C++ Sbjct: 61 KIISGPTCPRDYPKLNLLPESGEPNVTEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSN 120 Query: 391 ECHDLCTKNGVEIAQVVVA 447 C C N E+ Q V A Sbjct: 121 ACARFC--NDGEVIQSVEA 137
>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V| thionin); Acidic protein] Length = 131 Score = 37.4 bits (85), Expect = 0.026 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 12/128 (9%) Frame = +1 Query: 61 VKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSEC-----CGVS 225 +++ + LLVLGLV + Q + C + V + C STV +C C + Sbjct: 8 LESAIVCLLVLGLVLEQ--VQVEGVDCGANPFKVACFNSCLL-GPSTVFQCADFCACRLP 64 Query: 226 AGYISNDAGTECKSGYIDIEKVSLQAVNYCKLGCTASLCNKVTPSGNDAME-------RC 384 AG S + E A+ YC LGC +S+C+ + + +++ E RC Sbjct: 65 AGLASVRSSDEPN------------AIEYCSLGCRSSVCDNMINTADNSTEEMKLYVKRC 112 Query: 385 TSECHDLC 408 C C Sbjct: 113 GVACDSFC 120
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 37.0 bits (84), Expect = 0.033 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 4/101 (3%) Frame = +1 Query: 118 QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSL 297 + ++ CC + Y CR S E C +G A T C S Y Sbjct: 2 RNVESKSCCPNTTGRNIYNTCRLGGGSR--ERCASLSGCKIISAST-CPSDYPKF----- 53 Query: 298 QAVNYCKLGCTASLCNKVTPSGNDAME----RCTSECHDLC 408 YC LGC +S C +T N ++ RC + C +LC Sbjct: 54 ----YCTLGCQSSKCASITTPPNSEVDAEAVRCKAACSNLC 90
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 36.6 bits (83), Expect = 0.044 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 9/131 (6%) Frame = +1 Query: 58 NVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYI 237 ++K++ + +L+LGLV + Q + CC + Y C S C + G Sbjct: 6 SIKSVVICVLILGLVLEQ--VQVEGKSCCKNTTGRNCYNACHFAGGSR--PVCATACG-C 60 Query: 238 SNDAGTECKSGYIDI----EKVSLQAVNYCKLGCTASLCNKV--TPSGNDA---MERCTS 390 +G C Y + E A YC +GC S+C+ + G + M C++ Sbjct: 61 KIISGPTCPRDYPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSN 120 Query: 391 ECHDLCTKNGV 423 C C V Sbjct: 121 ACARFCNDGDV 131
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 36.2 bits (82), Expect = 0.057 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Frame = +1 Query: 73 AMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAG 252 ++++ VL LV + Q + CC + Y CR S C G I + G Sbjct: 9 SVVICVLILVLVLEQVQVEGKSCCKDTLARNCYNTCRFAGGSR-PVCAGACRCKIIS--G 65 Query: 253 TECKSGYIDI----EKVSLQAVNYCKLGCTASLCNKVTP--SGNDA---MERCTSECHDL 405 +C S Y + E YC +GCT S+C+ + G + M C++ C Sbjct: 66 PKCPSDYPKLNLLPESGEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARF 125 Query: 406 CTKNGV 423 C V Sbjct: 126 CNDGAV 131
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 35.4 bits (80), Expect = 0.097 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 9/131 (6%) Frame = +1 Query: 58 NVKTLAMILLVLGLVAMERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYI 237 ++K++ + +L+LGLV + Q + CC + Y C S C G I Sbjct: 6 SIKSVVICVLILGLVLEQ--VQVEGKSCCKDTLARNCYNTCHFAGGSR-PVCAGACRCKI 62 Query: 238 SNDAGTECKSGYIDI----EKVSLQAVNYCKLGCTASLCNKVTP--SGNDA---MERCTS 390 + G +C S Y + E YC +GC S+C+ + G + M C++ Sbjct: 63 IS--GPKCPSDYPKLNLLPESGEPDVTQYCTIGCRNSVCDNMDNVFRGQEMKFDMGLCSN 120 Query: 391 ECHDLCTKNGV 423 C C V Sbjct: 121 ACARFCNDGAV 131
>PE48_CHRBE (O17450) Peritrophin-48 precursor| Length = 379 Score = 30.0 bits (66), Expect = 4.1 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Frame = +1 Query: 67 TLAMILLVLGLVAMERT---QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYI 237 TLA+ILL + Q Q+ LDS Y+ C + T+S C S+GY+ Sbjct: 9 TLALILLAFAQADYDVASYCQLVQSGTKLPSLDSCQNYYTCVSNGLPTLSSC---SSGYV 65 Query: 238 SNDAGTEC 261 N +C Sbjct: 66 FNKDSQQC 73
>LAMA3_MOUSE (Q61789) Laminin alpha-3 chain precursor (Nicein alpha subunit)| Length = 3333 Score = 29.3 bits (64), Expect = 7.0 Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 9/103 (8%) Frame = +1 Query: 118 QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAG------YISNDAGTECK---SG 270 Q + C CH +V Y+D + GV AG N AG C+ G Sbjct: 346 QHNECEACNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKG 405 Query: 271 YIDIEKVSLQAVNYCKLGCTASLCNKVTPSGNDAMERCTSECH 399 Y V + A++ GC C+ P D ++ + CH Sbjct: 406 YFRPHGVPVDALH----GCIPCSCD---PERADDCDQGSGHCH 441
>IRX2_HUMAN (Q9BZI1) Iroquois-class homeodomain protein IRX-2 (Iroquois| homeobox protein 2) (Homeodomain protein IRXA2) Length = 471 Score = 29.3 bits (64), Expect = 7.0 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 103 AMERTQ-QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID 279 A E T+ A+ H+DS+ T C A+SD C AG ++G+ECK Y D Sbjct: 207 AQEGTETSAEDEGISLHVDSL-TDHSCSAESDGEKLPC---RAGDPLCESGSECKDKYDD 262 Query: 280 IE 285 +E Sbjct: 263 LE 264
>HYPA_HELHP (Q7VI03) Probable hydrogenase nickel incorporation protein hypA| Length = 118 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +3 Query: 285 ESFTTSSQLLQVGVHGFLV*QSNSIWERCHGTLHQ*MPRSVHQERCGNCTSRRGLTSYGK 464 E+F S L Q + L QS S+ C H +++ C C S + + GK Sbjct: 49 ETFRLDSPLCQ---NTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSHNVIIAKGK 105 Query: 465 ELHRTS 482 ELH S Sbjct: 106 ELHLLS 111
>YL112_MIMIV (Q5UPI6) Putative ankyrin repeat protein L112| Length = 457 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 19/66 (28%) Frame = +1 Query: 148 HLDSVPTYFDCRAKS-----DSTVSECC--------------GVSAGYISNDAGTECKSG 270 HLD+V F C + D VS CC + YI+ CK G Sbjct: 146 HLDTVKYLFSCGIEIINSIYDCIVSACCYGRLNIVIYLSNKISIPGDYINEAFVMACKYG 205 Query: 271 YIDIEK 288 Y+DI K Sbjct: 206 YLDIAK 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,347,633 Number of Sequences: 219361 Number of extensions: 1578273 Number of successful extensions: 4143 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3986 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4133 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)