ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group... 321 1e-84
2ref|XM_483502.1| Oryza sativa (japonica cultivar-group), mRNA 321 1e-84
3dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
4dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
5gb|BT016449.1| Zea mays clone Contig282 mRNA sequence 293 3e-76
6gb|AY105272.1| Zea mays PCO090198 mRNA sequence 285 7e-74
7gb|AY106901.1| Zea mays PCO090197 mRNA sequence 246 6e-62
8gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence 238 1e-59
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
10dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
11gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 123 6e-25
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
13gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatelli... 66 1e-07
14ref|NM_111647.3| Arabidopsis thaliana protein carrier AT3G07680 ... 56 1e-04
15gb|BT015477.1| Arabidopsis thaliana At3g07680 mRNA sequence 56 1e-04
16gb|AY040079.1| Arabidopsis thaliana putative coated vesicle memb... 56 1e-04
17gb|AF360268.1| Arabidopsis thaliana putative coated vesicle memb... 56 1e-04
18emb|BX822735.1|CNS0A603 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19emb|BX824623.1|CNS0A5N4 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20gb|AY088581.1| Arabidopsis thaliana clone 8095 mRNA, complete se... 56 1e-04
21emb|BX822157.1|CNS0A63Z Arabidopsis thaliana Full-length cDNA Co... 48 0.028
22emb|AL929470.20| Human DNA sequence from clone RP11-72M14 on chr... 46 0.11
23dbj|AK093528.1| Homo sapiens cDNA FLJ36209 fis, clone THYMU2000022 46 0.11
24gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complet... 46 0.11
25gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome ... 44 0.44
26gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosom... 44 0.44
27gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 44 0.44
28dbj|AK222535.1| Homo sapiens mRNA for formyltetrahydrofolate deh... 42 1.7
29ref|XM_472105.1| Oryza sativa (japonica cultivar-group), predic... 40 6.9
30gb|BT018411.1| Zea mays clone EL01N0326H03.d mRNA sequence 40 6.9
31gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
32gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosom... 40 6.9
33gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete... 40 6.9
34gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete se... 40 6.9
35emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in... 40 6.9
36gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 40 6.9
37gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 6.9
38dbj|AB169462.1| Macaca fascicularis testis cDNA, clone: QtsA-210... 40 6.9
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, comple... 40 6.9
42gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 40 6.9
43gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p... 40 6.9
44gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, c... 40 6.9
45emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-8... 40 6.9
46emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4,... 40 6.9
47emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4,... 40 6.9
48gb|AC171635.3| Rhesus Macaque CHR21 BAC CH250-374E17 (Children's... 40 6.9
49gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9 
>ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.27 mRNA
          Length = 946

 Score =  321 bits (162), Expect = 1e-84
 Identities = 255/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatttttcacct 88
           ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 496 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatgaacattttgctcct 555

                                                                       
Query: 89  ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
           |||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 556 ttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcac 615

                                                                       
Query: 149 tggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagcaggagggcc 208
           ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 616 tggctagaggcccaaactgaccgacaagctatattgaacgaaaacatgagcaggagggct 675

                                                                       
Query: 209 atccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattcaagtctat 268
            |||||||||| || || ||||| || ||||| ||| |||| ||||||||||||||||||
Sbjct: 676 gtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctat 735

                                                         
Query: 269 ctgctacgccgactcttcgagcgcaagctggggacatctagggtct 314
           ||  | ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct: 736 ctattgcgccgcctctttgagcgcaagttggggacatccagggtct 781
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>ref|XM_483502.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 920

 Score =  321 bits (162), Expect = 1e-84
 Identities = 255/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatttttcacct 88
           ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 380 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatgaacattttgctcct 439

                                                                       
Query: 89  ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
           |||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 440 ttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcac 499

                                                                       
Query: 149 tggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagcaggagggcc 208
           ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 500 tggctagaggcccaaactgaccgacaagctatattgaacgaaaacatgagcaggagggct 559

                                                                       
Query: 209 atccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattcaagtctat 268
            |||||||||| || || ||||| || ||||| ||| |||| ||||||||||||||||||
Sbjct: 560 gtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctat 619

                                                         
Query: 269 ctgctacgccgactcttcgagcgcaagctggggacatctagggtct 314
           ||  | ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct: 620 ctattgcgccgcctctttgagcgcaagttggggacatccagggtct 665
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>dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C01, full
           insert sequence
          Length = 920

 Score =  321 bits (162), Expect = 1e-84
 Identities = 255/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatttttcacct 88
           ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 380 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatgaacattttgctcct 439

                                                                       
Query: 89  ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
           |||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 440 ttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcac 499

                                                                       
Query: 149 tggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagcaggagggcc 208
           ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 500 tggctagaggcccaaactgaccgacaagctatattgaacgaaaacatgagcaggagggct 559

                                                                       
Query: 209 atccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattcaagtctat 268
            |||||||||| || || ||||| || ||||| ||| |||| ||||||||||||||||||
Sbjct: 560 gtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctat 619

                                                         
Query: 269 ctgctacgccgactcttcgagcgcaagctggggacatctagggtct 314
           ||  | ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct: 620 ctattgcgccgcctctttgagcgcaagttggggacatccagggtct 665
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>dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050B05, full
           insert sequence
          Length = 947

 Score =  321 bits (162), Expect = 1e-84
 Identities = 255/286 (89%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatttttcacct 88
           ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 496 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatgaacattttgctcct 555

                                                                       
Query: 89  ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
           |||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 556 ttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcac 615

                                                                       
Query: 149 tggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagcaggagggcc 208
           ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 616 tggctagaggcccaaactgaccgacaagctatattgaacgaaaacatgagcaggagggct 675

                                                                       
Query: 209 atccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattcaagtctat 268
            |||||||||| || || ||||| || ||||| ||| |||| ||||||||||||||||||
Sbjct: 676 gtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctat 735

                                                         
Query: 269 ctgctacgccgactcttcgagcgcaagctggggacatctagggtct 314
           ||  | ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct: 736 ctattgcgccgcctctttgagcgcaagttggggacatccagggtct 781
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>gb|BT016449.1| Zea mays clone Contig282 mRNA sequence
          Length = 1023

 Score =  293 bits (148), Expect = 3e-76
 Identities = 256/292 (87%)
 Strand = Plus / Minus

                                                                       
Query: 21  acttcgacgtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatt 80
           ||||||||||||||||||| |||| ||| || || || ||||||||||||||||| ||||
Sbjct: 506 acttcgacgtgcatgttggccatttttcatacttcgagcagcatgccaaagatgagcatt 447

                                                                       
Query: 81  tttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttg 140
           || ||||  | || || ||||| || ||||||||||| ||||||||||| || |||||||
Sbjct: 446 ttgcaccacttttcgagcaaatagccaagttagatgaggcactttacaatatccagtttg 387

                                                                       
Query: 141 agcagcactggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagca 200
           | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 386 aacagcactggctagaggcccaaactgaccgtcaagcaatattgaacgagaacatgagca 327

                                                                       
Query: 201 ggagggccatccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattc 260
           |||||||  ||||||||||||| ||||||||||| || || ||  | ||||||||||| |
Sbjct: 326 ggagggcagtccacaaggcactcttcgagtcggcggcactgatcgcggccagcgtcatcc 267

                                                               
Query: 261 aagtctatctgctacgccgactcttcgagcgcaagctggggacatctagggt 312
           | |||||||| || ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 266 aggtctatctcctgcgccggctcttcgagcgcaagctggggacgtctagggt 215
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>gb|AY105272.1| Zea mays PCO090198 mRNA sequence
          Length = 1288

 Score =  285 bits (144), Expect = 7e-74
 Identities = 255/292 (87%)
 Strand = Plus / Plus

                                                                        
Query: 21   acttcgacgtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatt 80
            ||||||||||||||||||| |||| ||| || || || ||||||||||||||||| ||||
Sbjct: 774  acttcgacgtgcatgttggccatttttcatacttcgagcagcatgccaaagatgagcatt 833

                                                                        
Query: 81   tttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttg 140
            || ||||  | || || ||||| || ||||||||||| ||||||||||| || |||||||
Sbjct: 834  ttgcaccacttttcgagcaaatagccaagttagatgaggcactttacaatatccagtttg 893

                                                                        
Query: 141  agcagcactggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagca 200
            | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 894  aacagcactggctagaggcccaaactgaccgtcaagcaatattgaacgagaacatgagca 953

                                                                        
Query: 201  ggagggccatccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattc 260
            |||||||  ||||||||||||| ||||||||||| || || ||    ||||||||||| |
Sbjct: 954  ggagggcagtccacaaggcactcttcgagtcggcggcactgatcgtggccagcgtcatcc 1013

                                                                
Query: 261  aagtctatctgctacgccgactcttcgagcgcaagctggggacatctagggt 312
            | |||||||| || ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1014 aggtctatctcctgcgccggctcttcgagcgcaagctggggacgtctagggt 1065
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>gb|AY106901.1| Zea mays PCO090197 mRNA sequence
          Length = 999

 Score =  246 bits (124), Expect = 6e-62
 Identities = 250/292 (85%)
 Strand = Plus / Plus

                                                                       
Query: 21  acttcgacgtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatt 80
           ||||||| || |||||||| |||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 534 acttcgatgttcatgttggccatttttcatatttcgagcagcatgccaaagatgagcatt 593

                                                                       
Query: 81  tttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttg 140
           || ||||  | ||||| ||||| |  ||||| ||||| ||||||||||| |||||||| |
Sbjct: 594 ttgcaccactttttgagcaaataggcaagttggatgaggcactttacaatattcagttcg 653

                                                                       
Query: 141 agcagcactggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagca 200
           | |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 654 aacagcactggctagaggcccagactgaccgtcaagcaatattgaacgagaacatgagca 713

                                                                       
Query: 201 ggagggccatccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattc 260
           |||||||  |||| ||||| || |||||||| || ||||| ||  | ||||||||||| |
Sbjct: 714 ggagggcagtccataaggcgctcttcgagtcagcggcgctgatcgccgccagcgtcatcc 773

                                                               
Query: 261 aagtctatctgctacgccgactcttcgagcgcaagctggggacatctagggt 312
           ||||||| || || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 774 aagtctacctcctgcgccggctcttcgagcgcaagctggggacgtctcgggt 825
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>gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence
          Length = 1153

 Score =  238 bits (120), Expect = 1e-59
 Identities = 249/292 (85%)
 Strand = Plus / Plus

                                                                       
Query: 21  acttcgacgtgcatgttggacattattcgtattttgatcagcatgccaaagatgaacatt 80
           ||||||| || |||||||| |||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 545 acttcgatgttcatgttggccatttttcatatttcgagcagcatgccaaagatgagcatt 604

                                                                       
Query: 81  tttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttg 140
           || ||||  | ||||| ||||| |  ||||| ||||| |||||||| || |||||||| |
Sbjct: 605 ttgcaccactttttgagcaaataggcaagttggatgaggcactttataatattcagttcg 664

                                                                       
Query: 141 agcagcactggctagaggcccaaaccgaccggcaagcaatattgaacgagaacatgagca 200
           | |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 665 aacagcactggctagaggcccagactgaccgtcaagcaatattgaacgagaacatgagca 724

                                                                       
Query: 201 ggagggccatccacaaggcacttttcgagtcggctgcgctcattacagccagcgtcattc 260
           |||||||  |||| ||||| || |||||||| || ||||| ||  | ||||||||||| |
Sbjct: 725 ggagggcagtccataaggcgctcttcgagtcagcggcgctgatcgccgccagcgtcatcc 784

                                                               
Query: 261 aagtctatctgctacgccgactcttcgagcgcaagctggggacatctagggt 312
           ||||||| || || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 785 aagtctacctcctgcgccggctcttcgagcgcaagctggggacgtctcgggt 836
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Minus

                                                                            
Query: 74       gaacatttttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacatt 133
                ||||||||| | ||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 26553071 gaacattttgctcctttgtttgaacaaatagcaaaattagatgaagcgctttacaacatt 26553012

                                                                 
Query: 134      cagtttgagcagcactggctagaggcccaaaccgaccggcaagcaatat 182
                ||||| |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 26553011 cagttcgagcagcactggctagaggcccaaactgaccgacaagctatat 26552963



 Score =  119 bits (60), Expect = 9e-24
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                            
Query: 183      tgaacgagaacatgagcaggagggccatccacaaggcacttttcgagtcggctgcgctca 242
                ||||||| |||||||||||||||||  |||||||||| || || ||||| || ||||| |
Sbjct: 26552053 tgaacgaaaacatgagcaggagggctgtccacaaggctctattggagtcagcagcgctga 26551994

                                                                            
Query: 243      ttacagccagcgtcattcaagtctatctgctacgccgactcttcgagcgcaagctgggga 302
                || |||| ||||||||||||||||||||  | ||||| ||||| ||||||||| ||||||
Sbjct: 26551993 ttgcagctagcgtcattcaagtctatctattgcgccgcctctttgagcgcaagttgggga 26551934

                            
Query: 303      catctagggtct 314
                |||| |||||||
Sbjct: 26551933 catccagggtct 26551922



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 29       gtgcatgttggacattattcgtattttgatcagcatgccaaagatg 74
                ||||||||||| |||| |||||| |||||||||||||| |||||||
Sbjct: 26553199 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatg 26553154
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702E04
          Length = 190948

 Score =  145 bits (73), Expect = 2e-31
 Identities = 100/109 (91%)
 Strand = Plus / Minus

                                                                          
Query: 74     gaacatttttcacctttgtttgaacaaattgcaaagttagatgaagcactttacaacatt 133
              ||||||||| | ||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 101938 gaacattttgctcctttgtttgaacaaatagcaaaattagatgaagcgctttacaacatt 101879

                                                               
Query: 134    cagtttgagcagcactggctagaggcccaaaccgaccggcaagcaatat 182
              ||||| |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 101878 cagttcgagcagcactggctagaggcccaaactgaccgacaagctatat 101830



 Score =  119 bits (60), Expect = 9e-24
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                          
Query: 183    tgaacgagaacatgagcaggagggccatccacaaggcacttttcgagtcggctgcgctca 242
              ||||||| |||||||||||||||||  |||||||||| || || ||||| || ||||| |
Sbjct: 100920 tgaacgaaaacatgagcaggagggctgtccacaaggctctattggagtcagcagcgctga 100861

                                                                          
Query: 243    ttacagccagcgtcattcaagtctatctgctacgccgactcttcgagcgcaagctgggga 302
              || |||| ||||||||||||||||||||  | ||||| ||||| ||||||||| ||||||
Sbjct: 100860 ttgcagctagcgtcattcaagtctatctattgcgccgcctctttgagcgcaagttgggga 100801

                          
Query: 303    catctagggtct 314
              |||| |||||||
Sbjct: 100800 catccagggtct 100789



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 29     gtgcatgttggacattattcgtattttgatcagcatgccaaagatg 74
              ||||||||||| |||| |||||| |||||||||||||| |||||||
Sbjct: 102066 gtgcatgttggccatttttcgtactttgatcagcatgcgaaagatg 102021
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>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score =  123 bits (62), Expect = 6e-25
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                          
Query: 89     ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
              |||||||| |||||||||||||| |||||||| || ||||||||||||||||| ||||||
Sbjct: 103627 ttgtttgagcaaattgcaaagttggatgaagccctctacaacattcagtttgaacagcac 103568

                                                
Query: 149    tggctagaggcccaaaccgaccggcaagcaatat 182
              ||| | ||||||||||| ||||||||||||||||
Sbjct: 103567 tggttggaggcccaaacagaccggcaagcaatat 103534



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                          
Query: 185    aacgagaacatgagcaggagggccatccacaaggcacttttcgagtcggctgcgctcatt 244
              |||||||||||||| ||||||||  | ||||||||| | || || || ||||| ||||||
Sbjct: 103114 aacgagaacatgagtaggagggcagttcacaaggcattctttgaatcagctgctctcatt 103055

                                                                          
Query: 245    acagccagcgtcattcaagtctatctgctacgccgactcttcgagcgcaagctggggaca 304
               ||||||| ||  | || ||||| || || |  || ||||| ||||| |||||||| |||
Sbjct: 103054 gcagccagtgttgtgcaggtctacctactgcatcgcctctttgagcgaaagctgggaaca 102995

                        
Query: 305    tctagggtct 314
              || |||||||
Sbjct: 102994 tcgagggtct 102985



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 46     ttcgtattttgatcagcatgccaaagatg 74
              |||||||| ||| ||||||||||||||||
Sbjct: 103747 ttcgtattatgaccagcatgccaaagatg 103719
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  123 bits (62), Expect = 6e-25
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                            
Query: 89       ttgtttgaacaaattgcaaagttagatgaagcactttacaacattcagtttgagcagcac 148
                |||||||| |||||||||||||| |||||||| || ||||||||||||||||| ||||||
Sbjct: 19384401 ttgtttgagcaaattgcaaagttggatgaagccctctacaacattcagtttgaacagcac 19384342

                                                  
Query: 149      tggctagaggcccaaaccgaccggcaagcaatat 182
                ||| | ||||||||||| ||||||||||||||||
Sbjct: 19384341 tggttggaggcccaaacagaccggcaagcaatat 19384308



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                            
Query: 185      aacgagaacatgagcaggagggccatccacaaggcacttttcgagtcggctgcgctcatt 244
                |||||||||||||| ||||||||  | ||||||||| | || || || ||||| ||||||
Sbjct: 19383888 aacgagaacatgagtaggagggcagttcacaaggcattctttgaatcagctgctctcatt 19383829

                                                                            
Query: 245      acagccagcgtcattcaagtctatctgctacgccgactcttcgagcgcaagctggggaca 304
                 ||||||| ||  | || ||||| || || |  || ||||| ||||| |||||||| |||
Sbjct: 19383828 gcagccagtgttgtgcaggtctacctactgcatcgcctctttgagcgaaagctgggaaca 19383769

                          
Query: 305      tctagggtct 314
                || |||||||
Sbjct: 19383768 tcgagggtct 19383759



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 46       ttcgtattttgatcagcatgccaaagatg 74
                |||||||| ||| ||||||||||||||||
Sbjct: 19384521 ttcgtattatgaccagcatgccaaagatg 19384493
to top
>gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatellite sequence
          Length = 701

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 106 aaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaac 165
           |||||| || ||||| |||||||||||||||||||| ||||| ||| | ||||| || ||
Sbjct: 520 aaagttggaggaagctctttacaacattcagtttgaacagcattggttggaggcacagac 579

                                
Query: 166 cgaccggcaagcaatattgaa 186
            ||||| ||||||||| ||||
Sbjct: 580 tgaccgccaagcaatagtgaa 600
to top
>ref|NM_111647.3| Arabidopsis thaliana protein carrier AT3G07680 mRNA, complete cds
          Length = 1021

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 583 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 642

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 643 ccgatcgtcaagctatcgtgaacgagaacatgagca 678
to top
>gb|BT015477.1| Arabidopsis thaliana At3g07680 mRNA sequence
          Length = 564

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 353 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 412

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 413 ccgatcgtcaagctatcgtgaacgagaacatgagca 448
to top
>gb|AY040079.1| Arabidopsis thaliana putative coated vesicle membrane protein
           (At3g07680) mRNA, complete cds
          Length = 627

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 416 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 475

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 476 ccgatcgtcaagctatcgtgaacgagaacatgagca 511
to top
>gb|AF360268.1| Arabidopsis thaliana putative coated vesicle membrane protein
           (At3g07680) mRNA, complete cds
          Length = 897

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 553 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 612

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 613 ccgatcgtcaagctatcgtgaacgagaacatgagca 648
to top
>emb|BX822735.1|CNS0A603 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZC05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 413

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 32  caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 91

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 92  ccgatcgtcaagctatcgtgaacgagaacatgagca 127
to top
>emb|BX824623.1|CNS0A5N4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH60ZB11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 895

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 583 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 642

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 643 ccgatcgtcaagctatcgtgaacgagaacatgagca 678
to top
>gb|AY088581.1| Arabidopsis thaliana clone 8095 mRNA, complete sequence
          Length = 856

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 569 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 628

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  ||||||||||||||||||
Sbjct: 629 ccgatcgtcaagccatcgtgaacgagaacatgagca 664
to top
>emb|BX822157.1|CNS0A63Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB16ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 872

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 caaagttagatgaagcactttacaacattcagtttgagcagcactggctagaggcccaaa 164
           |||||||||| || || ||||||||||| || ||||| || || ||| |||| || || |
Sbjct: 580 caaagttagaggaggctctttacaacatccaatttgaacaacattggttagaagctcaga 639

                                               
Query: 165 ccgaccggcaagcaatattgaacgagaacatgagca 200
           |||| || ||||| ||  |||||||| |||||||||
Sbjct: 640 ccgatcgtcaagctatcgtgaacgagcacatgagca 675
to top
>emb|AL929470.20| Human DNA sequence from clone RP11-72M14 on chromosome 1 Contains the
             5' end of the WNT2B gene for wingless-type MMTV
             integration site family, member 2B, the 5' end of the
             CAPZA1 gene for capping protein (actin filament) muscle
             Z-line, alpha 1 and a mitochondrial ribosomal protein L53
             (MRPL53) pseudogene, complete sequence
          Length = 34919

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 385   tttgtggattctttgttttacat 407
             |||||||||||||||||||||||
Sbjct: 12432 tttgtggattctttgttttacat 12454
to top
>dbj|AK093528.1| Homo sapiens cDNA FLJ36209 fis, clone THYMU2000022
          Length = 2510

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 385  tttgtggattctttgttttacat 407
            |||||||||||||||||||||||
Sbjct: 1828 tttgtggattctttgttttacat 1850
to top
>gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complete sequence
          Length = 152547

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 65     gccaaagatgaacatttttcacc 87
              |||||||||||||||||||||||
Sbjct: 143186 gccaaagatgaacatttttcacc 143208
to top
>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence
          Length = 153106

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 393    ttctttgttttacatatgtaat 414
              ||||||||||||||||||||||
Sbjct: 140626 ttctttgttttacatatgtaat 140605
to top
>gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosome 7, complete sequence
          Length = 186032

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 393    ttctttgttttacatatgtaat 414
              ||||||||||||||||||||||
Sbjct: 147169 ttctttgttttacatatgtaat 147190
to top
>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
             sequence
          Length = 176639

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 393   ttctttgttttacatatgtaat 414
             ||||||||||||||||||||||
Sbjct: 63575 ttctttgttttacatatgtaat 63596
to top
>dbj|AK222535.1| Homo sapiens mRNA for formyltetrahydrofolate dehydrogenase isoform a
            variant, clone: adSE01941
          Length = 3043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 336  cctcatcgtcccctcgaagct 356
            |||||||||||||||||||||
Sbjct: 1333 cctcatcgtcccctcgaagct 1313
to top
>ref|XM_472105.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5136

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aacatttttcacctttgttt 94
            ||||||||||||||||||||
Sbjct: 2538 aacatttttcacctttgttt 2519
to top
>gb|BT018411.1| Zea mays clone EL01N0326H03.d mRNA sequence
          Length = 955

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ctgatatccattctcacgga 491
           ||||||||||||||||||||
Sbjct: 51  ctgatatccattctcacgga 32
to top
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aacatttttcacctttgttt 94
             ||||||||||||||||||||
Sbjct: 90997 aacatttttcacctttgttt 90978
to top
>gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosome 15, complete
             sequence
          Length = 172962

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 443   aaatgacaatttacagttccatgt 466
             ||||||||||||| ||||||||||
Sbjct: 46787 aaatgacaatttagagttccatgt 46810
to top
>gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete sequence
          Length = 154844

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    atgaacatttttcacctttg 91
             ||||||||||||||||||||
Sbjct: 67114 atgaacatttttcacctttg 67133
to top
>gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete sequence
          Length = 113939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     attattcgtattttgatcag 61
              ||||||||||||||||||||
Sbjct: 106241 attattcgtattttgatcag 106260
to top
>emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in linkage group 5,
             complete sequence
          Length = 134388

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aaaatgacaatttacagttc 461
             ||||||||||||||||||||
Sbjct: 98860 aaaatgacaatttacagttc 98841
to top
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aacatttttcacctttgttt 94
              ||||||||||||||||||||
Sbjct: 387452 aacatttttcacctttgttt 387471
to top
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence
          Length = 120811

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tccaaaacaccgcctcatcg 343
             ||||||||||||||||||||
Sbjct: 73961 tccaaaacaccgcctcatcg 73980
to top
>dbj|AB169462.1| Macaca fascicularis testis cDNA, clone: QtsA-21062, similar to human
            phosphoribosylglycinamide
            formyltransferase,phosphoribosylglycinamide
            synthetase,phosphoribosylaminoimidazole synthetase
            (GART),transcript variant 2, mRNA, RefSeq: NM_175085.1
          Length = 1834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   caaattgcaaagttagatga 117
            ||||||||||||||||||||
Sbjct: 1668 caaattgcaaagttagatga 1649
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 75       aacatttttcacctttgttt 94
                ||||||||||||||||||||
Sbjct: 17530727 aacatttttcacctttgttt 17530708
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 75      aacatttttcacctttgttt 94
               ||||||||||||||||||||
Sbjct: 3213280 aacatttttcacctttgttt 3213261
to top
>gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, complete sequence
          Length = 133478

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aacatttttcacctttgttt 94
              ||||||||||||||||||||
Sbjct: 104296 aacatttttcacctttgttt 104315
to top
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    acattattcgtattttgatcagca 63
             ||||||||| ||||||||||||||
Sbjct: 44077 acattattcttattttgatcagca 44054
to top
>gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p22, complete sequence
          Length = 137057

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    atgaacatttttcacctttg 91
             ||||||||||||||||||||
Sbjct: 74368 atgaacatttttcacctttg 74349
to top
>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence
          Length = 180016

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atttttcacctttgtttgaa 97
             ||||||||||||||||||||
Sbjct: 64985 atttttcacctttgtttgaa 65004
to top
>emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-862P13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187564

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   attctttgttttacatatgt 411
             ||||||||||||||||||||
Sbjct: 89667 attctttgttttacatatgt 89686
to top
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05,
             complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aacatttttcacctttgttt 94
             ||||||||||||||||||||
Sbjct: 11467 aacatttttcacctttgttt 11448
to top
>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20,
              complete sequence
          Length = 191218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     aacatttttcacctttgttt 94
              ||||||||||||||||||||
Sbjct: 189493 aacatttttcacctttgttt 189474
to top
>gb|AC171635.3| Rhesus Macaque CHR21 BAC CH250-374E17 (Children's Hospital Oakland
              Research Institute Rhesus macaque Adult Male BAC Library)
              complete sequence
          Length = 172069

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     caaattgcaaagttagatga 117
              ||||||||||||||||||||
Sbjct: 113341 caaattgcaaagttagatga 113360
to top
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
            complete sequence
          Length = 167317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aacatttttcacctttgttt 94
            ||||||||||||||||||||
Sbjct: 7104 aacatttttcacctttgttt 7085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,080,967
Number of Sequences: 3902068
Number of extensions: 4080967
Number of successful extensions: 76939
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76762
Number of HSP's gapped (non-prelim): 176
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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