ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal9p15 |
|---|---|
| Clone Library Name | barley_pub |
>PIR7A_ORYSA (Q40708) Putative esterase PIR7A (EC 3.1.-.-)| Length = 263 Score = 59.3 bits (142), Expect = 9e-09 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%) Frame = -1 Query: 596 FNQSPSKDIALATVSMRPIPLA---PIMEKLSLTAE-NYGSIRRYFIQTLDDRMLSPDVQ 429 +N+SP +D+ LAT+ +RP PIM+ +L E NYGS++R F+ +DD ++Q Sbjct: 162 YNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQ 221 Query: 428 EKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 318 + SP + ++ G DH SKP+ L +LL I Sbjct: 222 RWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRI 258
>PIR7B_ORYSA (Q43360) Putative esterase PIR7B (EC 3.1.-.-)| Length = 268 Score = 59.3 bits (142), Expect = 9e-09 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 4/98 (4%) Frame = -1 Query: 599 YFNQSPSKDIALATVSMRP---IPLAPIMEKLSL-TAENYGSIRRYFIQTLDDRMLSPDV 432 Y+ QSP++D+ALA + +RP P+M+ SL T NYGS+++ ++ D + ++ Sbjct: 166 YYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEM 225 Query: 431 QEKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 318 Q +V SP + +I G DH SKP+ L IL++I Sbjct: 226 QRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKI 263
>HNL_MANES (P52705) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 49.3 bits (116), Expect = 9e-06 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%) Frame = -1 Query: 596 FNQSPSKDIALATVSMRPIPLAP--IMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEK 423 F + + LA + MR L + ++ T + YGSI++ +I T D++ PD Q Sbjct: 158 FTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRW 217 Query: 422 LVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEIVQIQA 303 + PD +++++GGDH +K + + IL E+ A Sbjct: 218 QIANYKPDKVYQVQGGDHKLQLTKTEEVAHILQEVADAYA 257
>HNL_HEVBR (P52704) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/63 (33%), Positives = 37/63 (58%) Frame = -1 Query: 506 TAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKIL 327 T E YGSI++ ++ T D + P+ Q + PD ++K++GGDH +K + + +IL Sbjct: 190 TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEIL 249 Query: 326 LEI 318 E+ Sbjct: 250 QEV 252
>PNAE_RAUSE (Q9SE93) Polyneuridine-aldehyde esterase precursor (EC 3.1.1.78)| (Polyneuridine aldehyde esterase) Length = 264 Score = 43.9 bits (102), Expect = 4e-04 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = -1 Query: 596 FNQSPSKDIALATVSMRPIPL--APIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEK 423 F +D+ LA + RP L + + + E YGS++R +I +D+ + Q+ Sbjct: 167 FQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKW 226 Query: 422 LVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 318 V D + +IK DH S+P+ + K LL+I Sbjct: 227 FVESVGADKVKEIKEADHMGMLSQPREVCKCLLDI 261
>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte| formin) (CLL-associated antigen KW-13) Length = 1100 Score = 36.2 bits (82), Expect = 0.081 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = -3 Query: 483 PPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGR 376 PP P G PDA+ RR E GPG A++ +Q K R Sbjct: 606 PPPPPPPGGPPDALGRRDSELGPGVKAKKPIQTKFR 641
>AB14B_PONPY (Q5R816) Abhydrolase domain-containing protein 14B| (CCG1-interacting factor B) Length = 210 Score = 33.1 bits (74), Expect = 0.68 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -1 Query: 542 IPLAPIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCP 363 +P+API + A NY S++ + D+ + +++ P + +KG H Sbjct: 132 VPVAPICTD-KINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKGAGHPC 190 Query: 362 FFSKPQSLHKILLEIVQ 312 + KP+ H LL+ +Q Sbjct: 191 YLDKPEEWHTGLLDFLQ 207
>AB14B_HUMAN (Q96IU4) Abhydrolase domain-containing protein 14B| (CCG1-interacting factor B) Length = 210 Score = 33.1 bits (74), Expect = 0.68 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -1 Query: 542 IPLAPIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCP 363 +P+API + A NY S++ + D+ + +++ P + +KG H Sbjct: 132 VPVAPICTD-KINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKGAGHPC 190 Query: 362 FFSKPQSLHKILLEIVQ 312 + KP+ H LL+ +Q Sbjct: 191 YLDKPEEWHTGLLDFLQ 207
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 552 HEAHPFSPDHGEAVSHGGELRQHPPLLHPDAG 457 H AHP+ P H A H HPP +P AG Sbjct: 120 HHAHPYHPPHPHAPHH--HHHHHPPYPYPPAG 149
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 30.4 bits (67), Expect = 4.4 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = -3 Query: 522 GEAVSHGGELRQHPPLLHPDAGRPDAVARRPGE-AGPGEPARRHLQDKGRRXXXXXXXXX 346 G++ S G L ++P D DA ++ G+ A P P L+ G R Sbjct: 53 GQSASRGRGLGENP-----DDEEGDAKKKKDGKKAEPKNPRENKLKQPGDRADGQPAGDR 107 Query: 345 XXPQDPAGDRAD-PSSGGAAPGQ 280 Q PAGDRAD +G A GQ Sbjct: 108 ADGQ-PAGDRADGQPAGDRAAGQ 129
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/89 (22%), Positives = 38/89 (42%) Frame = -3 Query: 534 SPDHGEAVSHGGELRQHPPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGRRXXXXXX 355 SP G+ G+ + PP P G A + +P + P+++ L +G++ Sbjct: 418 SPGQGQLGPLLGQPQPRPP---PQGGPRQAQSPQPPRSR--SPSQQRLSPQGQQPVSPQS 472 Query: 354 XXXXXPQDPAGDRADPSSGGAAPGQSKDP 268 + P + +SGG++P Q+ P Sbjct: 473 GSPQQQRSPGSPQLSRASGGSSPNQASKP 501
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/89 (22%), Positives = 38/89 (42%) Frame = -3 Query: 534 SPDHGEAVSHGGELRQHPPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGRRXXXXXX 355 SP G+ G+ + PP P G A + +P + P+++ L +G++ Sbjct: 418 SPGQGQLGPLLGQPQPRPP---PQGGPRQAQSPQPPRSR--SPSQQRLSPQGQQPVSPQS 472 Query: 354 XXXXXPQDPAGDRADPSSGGAAPGQSKDP 268 + P + +SGG++P Q+ P Sbjct: 473 GSPQQQRSPGSPQLSRASGGSSPNQASKP 501
>VST2_HEVME (Q03500) Structural protein 2 precursor| Length = 659 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -3 Query: 555 VHEAHPFSPDHGEAVSHGGELRQHPPLL----HPDAGRPDAVA-RRPGEAG 418 +H +PF+PD A G LRQ L A RP A + RRP AG Sbjct: 56 IHPTNPFAPDVAAASGSGPRLRQPARPLGSTWRDQAQRPSAASRRRPATAG 106
>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate 80 kDa protein) Length = 308 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 12/76 (15%) Frame = -3 Query: 462 AGRPDAVARRPGEAG-PGEPARRHLQDKGRRXXXXXXXXXXXPQD-----------PAGD 319 A + +A A RPGEA P++ + Q+ G PA D Sbjct: 8 AAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAEPGAKEELQANGSAPAAD 67 Query: 318 RADPSSGGAAPGQSKD 271 + +P+SGGAA + D Sbjct: 68 KEEPASGGAATPAAAD 83
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 373 SPPFILKMPSGGLSRTSFSWTSGDSIRSSS 462 SP + MPSG +RTSF W+ S SS Sbjct: 1076 SPAALPAMPSGSEARTSFPWSESQSAPPSS 1105
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -3 Query: 597 FQPKSFQGYRAGHRVHEAHPFSPDHGEAVSHGGELRQHPPLLHP 466 F+P + + H+ HE P P SHG L Q PP L P Sbjct: 278 FKPHGSRDHHHPHKPHEHGPPPPPDERDHSHGPPLPQGPPPLLP 321
>EFP_BRUSU (Q8FYZ5) Elongation factor P (EF-P)| Length = 186 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 318 DLQQDLV--EGLRLREEGAVVAALYLEDAVGRALPDQLLLDVGRQHPVVQ 461 +LQ+D V L++ V LY E +G LPDQ+ L + PVV+ Sbjct: 93 ELQKDFVGDRAAFLQDGMMVTVELYEEKPIGIRLPDQVTLAITEADPVVK 142
>EFP_BRUME (Q8YIW2) Elongation factor P (EF-P)| Length = 186 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 318 DLQQDLV--EGLRLREEGAVVAALYLEDAVGRALPDQLLLDVGRQHPVVQ 461 +LQ+D V L++ V LY E +G LPDQ+ L + PVV+ Sbjct: 93 ELQKDFVGDRAAFLQDGMMVTVELYEEKPIGIRLPDQVTLAITEADPVVK 142
>EFP_BRUAB (P0C103) Elongation factor P (EF-P)| Length = 186 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 318 DLQQDLV--EGLRLREEGAVVAALYLEDAVGRALPDQLLLDVGRQHPVVQ 461 +LQ+D V L++ V LY E +G LPDQ+ L + PVV+ Sbjct: 93 ELQKDFVGDRAAFLQDGMMVTVELYEEKPIGIRLPDQVTLAITEADPVVK 142
>EFP_BRUA2 (Q2YRC4) Elongation factor P (EF-P)| Length = 186 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 318 DLQQDLV--EGLRLREEGAVVAALYLEDAVGRALPDQLLLDVGRQHPVVQ 461 +LQ+D V L++ V LY E +G LPDQ+ L + PVV+ Sbjct: 93 ELQKDFVGDRAAFLQDGMMVTVELYEEKPIGIRLPDQVTLAITEADPVVK 142
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 29.3 bits (64), Expect = 9.9 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = -3 Query: 504 GGELRQHPPLLHPDAGRPDAVARRPGEAGP-GEPARRHLQDKGRRXXXXXXXXXXXPQDP 328 GG Q P DAGRP A A RPG AGP GEP + + R P Sbjct: 177 GGPGEQGP---QGDAGRPGA-AGRPGPAGPRGEPGTEYKPGQPGRPGPQGPRGET---GP 229 Query: 327 AGDRADPSSGGAA 289 AG+ P + G A Sbjct: 230 AGNPGAPGNDGEA 242
>LRC32_PONPY (Q5RF01) Leucine-rich repeat-containing protein 32 precursor| Length = 662 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 511 DSFSMIGAKGMGLMDTVASAISLEGLWLKYNPLICC 618 +SFS++ MG ++T SL L+L+ NPL CC Sbjct: 546 NSFSLLPGSAMGGLET-----SLRRLYLQGNPLSCC 576
>LRC32_HUMAN (Q14392) Leucine-rich repeat-containing protein 32 precursor (GARP| protein) (Garpin) (Glycoprotein A repetitions predominant) Length = 662 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 511 DSFSMIGAKGMGLMDTVASAISLEGLWLKYNPLICC 618 +SFS++ MG ++T SL L+L+ NPL CC Sbjct: 546 NSFSLLPGSAMGGLET-----SLRRLYLQGNPLSCC 576
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 29.3 bits (64), Expect = 9.9 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 Query: 576 GYRAGHRVHEAHPFSPDHGEAVSHGGEL 493 G H H +H P HG SHGG++ Sbjct: 58 GAHPSHGAHPSHGAHPSHGALPSHGGQV 85
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 29.3 bits (64), Expect = 9.9 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 2/86 (2%) Frame = -3 Query: 525 HGEAVSHGGELRQHPPLLHPDAGRP--DAVARRPGEAGPGEPARRHLQDKGRRXXXXXXX 352 H + V G R P G P V RRPGE GP + A R +GR Sbjct: 937 HRQGVGGSGGSRSGSPRTGTADGEPRRHRVHRRPGEDGPDDKAER----RGRH-----RE 987 Query: 351 XXXXPQDPAGDRADPSSGGAAPGQSK 274 + G+ P GG G+ + Sbjct: 988 GSRPARSGEGEAEGPDGGGGGGGERR 1013
>EFP_BARQU (Q6FYN9) Elongation factor P (EF-P)| Length = 190 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = +3 Query: 300 RSLDLHDLQQDLV--EGLRLREEGAVVAALYLEDAVGRALPDQLLLDVGRQHPVVQ 461 +S + +LQ+D V L+E V LY E +G +LPDQ+ + + P ++ Sbjct: 87 QSYEQLELQKDFVGERAAFLQEGMTVTVELYQEKPIGISLPDQVSVTIAEADPALK 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,959,854 Number of Sequences: 219361 Number of extensions: 1578566 Number of successful extensions: 5599 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 5331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5564 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
