ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16l01 |
|---|---|
| Clone Library Name | barley_pub |
>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70) Length = 616 Score = 91.7 bits (226), Expect = 2e-18 Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Frame = +3 Query: 3 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 182 VQ++F ID L LVDIIG+ +S I + +N + KR+I + D S K V Sbjct: 298 VQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVV 356 Query: 183 TVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPET 356 T +LW + A D D + P++AIK +VSDF G S+S + ST++ NP++PE Sbjct: 357 TATLWGEDA--------DKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEA 408 Query: 357 EKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQ-DKPVFFS 533 KLR W+++EG+ + L + S+ NLGQ DKP +FS Sbjct: 409 YKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKT----LYEVKSE-NLGQGDKPDYFS 463 Query: 534 PV 539 V Sbjct: 464 SV 465
>RFA1_MOUSE (Q8VEE4) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 623 Score = 91.3 bits (225), Expect = 2e-18 Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 2/113 (1%) Frame = +3 Query: 60 LVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDM 239 LVDIIG+ +S ++ I K +N + KR+I + D S K VT +LW + A D Sbjct: 325 LVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDA--------DK 376 Query: 240 VDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESEGK 392 D + P++AIK +VSDF G S+S + ST+++NP++PE KLR W++SEG+ Sbjct: 377 FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ 429
>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 616 Score = 91.3 bits (225), Expect = 2e-18 Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Frame = +3 Query: 3 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 182 VQ++F ID L LVDIIG+ +S I + +N + KR+I + D S K V Sbjct: 298 VQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVV 356 Query: 183 TVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPET 356 T +LW + A D D + P++AIK +VSDF G S+S + ST++ NP++PE Sbjct: 357 TATLWGEDA--------DKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEA 408 Query: 357 EKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQ-DKPVFFS 533 KLR W+++EG+ + L + S+ NLGQ DKP +FS Sbjct: 409 YKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKT----LYEVKSE-NLGQGDKPDYFS 463 Query: 534 PV 539 V Sbjct: 464 SV 465
>RFA1_XENLA (Q01588) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70) Length = 609 Score = 89.4 bits (220), Expect = 8e-18 Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Frame = +3 Query: 3 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 182 VQ+ FV I L ++DIIGV ++V + K +N + KR I + D S K V Sbjct: 289 VQFEFVSIGELESK-NKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVV 347 Query: 183 TVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPET 356 + +LW + A D D + P+VAIK ++SDF G S+S + ST++INP++PE Sbjct: 348 STTLWGEDA--------DKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEA 399 Query: 357 EKLRAWYESEGK 392 KLRAW++SEG+ Sbjct: 400 FKLRAWFDSEGQ 411
>RFA1_CHICK (Q5ZJJ2) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 614 Score = 87.8 bits (216), Expect = 2e-17 Identities = 49/130 (37%), Positives = 72/130 (55%) Frame = +3 Query: 3 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 182 VQ++FV I L +VD+IG+ +S I K N + KR++ + D S K V Sbjct: 295 VQFDFVSISDL-ENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLV 353 Query: 183 TVSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEK 362 T +LW + A P++AIK +VSDF G S+S + ST+V+NP+ PE K Sbjct: 354 TATLWGNEAEKFDGS------RQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFK 407 Query: 363 LRAWYESEGK 392 LR W++SEG+ Sbjct: 408 LRGWFDSEGQ 417
>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 609 Score = 86.3 bits (212), Expect = 6e-17 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Frame = +3 Query: 3 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 182 VQ+ FV I L ++DIIG+ ++ + + +N + KR+I + D S K V Sbjct: 290 VQFEFVPIGELESK-NKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVV 348 Query: 183 TVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPET 356 + +LW + A D D + P+VAIK ++SDF G S+S + ST++INP++PE Sbjct: 349 STTLWGEDA--------DKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEA 400 Query: 357 EKLRAWYESEGK 392 KLRAW++SEG+ Sbjct: 401 FKLRAWFDSEGQ 412
>RFA1_YEAST (P22336) Replication factor-A protein 1 (RF-A) (Single-stranded| DNA-binding protein) (DNA-binding protein BUF2) (Replication protein A 69 kDa DNA-binding subunit) Length = 621 Score = 84.0 bits (206), Expect = 3e-16 Identities = 42/128 (32%), Positives = 73/128 (57%) Frame = +3 Query: 9 YNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTV 188 +NF+K+D + VD++G++Q+++P + + + +RDI + DDS +++V Sbjct: 300 FNFIKLDAIQNQEVNSN-VDVLGIIQTINPHFELTSRA-GKKFDRRDITIVDDSGFSISV 357 Query: 189 SLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLR 368 LWN A + + AIK ++V+DF G S+S STL+ NPE+PE L+ Sbjct: 358 GLWNQQALDFN------LPEGSVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALK 411 Query: 369 AWYESEGK 392 WY+S+G+ Sbjct: 412 GWYDSKGR 419
>RFA1_SCHPO (Q92372) Replication factor-A protein 1 (Single-stranded| DNA-binding protein p68 subunit) Length = 609 Score = 84.0 bits (206), Expect = 3e-16 Identities = 42/130 (32%), Positives = 73/130 (56%) Frame = +3 Query: 6 QYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVT 185 +++FV + +G V ++D+IGV+Q+V P I + + KRDI + D + + Sbjct: 294 KFSFVSLQEVGD-VAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMR 352 Query: 186 VSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKL 365 V+LW A V I+A K +KV+DFQG S+S + ST+ ++P++ E+ L Sbjct: 353 VTLWGKTAIEFS------VSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLL 406 Query: 366 RAWYESEGKG 395 + WY+ +G+G Sbjct: 407 KGWYDGQGRG 416
>RFA1_BRARE (Q6NY74) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 601 Score = 77.0 bits (188), Expect = 4e-14 Identities = 41/110 (37%), Positives = 64/110 (58%) Frame = +3 Query: 60 LVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDM 239 ++D+IGV ++ I K E + KR+I + D S + + +++W A T Sbjct: 303 ILDVIGVCKNAEDVARIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDAETFDGS---- 357 Query: 240 VDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESEG 389 PI+AIK ++SDF G S+ST+ ST++INP++PE KLR WY+ EG Sbjct: 358 --GQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEG 405
>RFA1_DROME (Q24492) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (DmRPA1) (p70) Length = 603 Score = 75.1 bits (183), Expect = 1e-13 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%) Frame = +3 Query: 3 VQYNFVKI-DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKT 179 ++YN V I D+ G + + VD IG+ + V S + N+ KRDI + D SN Sbjct: 282 IKYNLVPISDVSG--MENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSA 339 Query: 180 VTVSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQ-GVSVSTVGKSTLVINPELPET 356 ++++LW D A + P++ +K ++++F G S+S G S + INP++PE Sbjct: 340 ISLTLWGDDAVNFDGHV------QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEA 393 Query: 357 EKLRAWYESEG 389 KLR W+++ G Sbjct: 394 HKLRGWFDNGG 404
>RFA1_CRIFA (Q23696) Replication factor A 51 kDa subunit (RP-A) (RF-A)| (Replication factor-A protein 1) (Single-stranded DNA-binding protein P51 subunit) Length = 467 Score = 73.2 bits (178), Expect = 6e-13 Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%) Frame = +3 Query: 6 QYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVT 185 +YNFV I++L G LVD++GVV V SI +K + KR++ + D S V Sbjct: 128 RYNFVPIELLKQREVG-SLVDVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMS-AAVE 185 Query: 186 VSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINP-ELPETEK 362 V+ WND A + +VA++ LKV F GV++S+ ++ + +NP +LP+ +K Sbjct: 186 VTFWNDEAKAWNYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDVNPADLPDVKK 239 Query: 363 LRAWYESEG 389 L WY S G Sbjct: 240 LATWYVSTG 248
>RFA1_CAEEL (Q19537) Probable replication factor A 73 kDa subunit (RP-A) (RF-A)| (Replication factor-A protein 1) Length = 655 Score = 48.5 bits (114), Expect = 1e-05 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 3/123 (2%) Frame = +3 Query: 18 VKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSLW 197 VK+ + Y G +L+D++ VV+ + P + +S+ KR++ + D+S V ++LW Sbjct: 341 VKLGEIAGYAG--QLIDVLVVVEKMDPEATEFTSKAGKSLIKREMELIDESGALVRLTLW 398 Query: 198 NDLATTLGEELLDMVDS--APIVAIKSLKVSDFQGVSVSTVGKSTLVIN-PELPETEKLR 368 D AT +VD ++A K + +F G G +T +I+ PE+ +L Sbjct: 399 GDEATKA------LVDDYVQKVIAFKGVIPREFNGGFSLGTGSATRIISVPEIAGVSELY 452 Query: 369 AWY 377 WY Sbjct: 453 DWY 455
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 32.7 bits (73), Expect = 0.84 Identities = 29/99 (29%), Positives = 42/99 (42%) Frame = -2 Query: 445 PPALDAPIPAPTDAKEVPLPSDSYQALSFSVSGNSGLITSVLLPTVETDTP*KSDTFRLL 266 PP +D P K V + FS SGNS +T +L T ++ P S T ++L Sbjct: 305 PPVIDVPSTGAPSKKSVARIGQTGTKSVFSQSGNSREVTPILAQT-QSSGPQTSTTPQVL 363 Query: 265 IATIGAESTMSNSSSPRVVARSFQRETVTVLFESSATTM 149 TI T ++ PR +R F ++ T S M Sbjct: 364 SPTI----TSPPNALPRRSSRLFTSDSSTTKENSKKLKM 398
>YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II| Length = 1102 Score = 31.6 bits (70), Expect = 1.9 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Frame = +3 Query: 78 VVQSVSPTLS---IRRKIDNESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDS 248 V QSVS + + + +ES+PK +DD++ VT ND+ G+ +D V + Sbjct: 967 VKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDIN---GDSNMDNVAT 1023 Query: 249 APIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETE 359 K +D S +TV +T ELP+ E Sbjct: 1024 VD-------KSTDAVDTSTATVAATTTTAEEELPQKE 1053
>ALR1_VIBCH (Q9KUY6) Alanine racemase 1 (EC 5.1.1.1)| Length = 361 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/85 (30%), Positives = 36/85 (42%) Frame = +1 Query: 328 LLLTQSCLRLRSLEPGMNLKARVLPWHQLVLEWVHPALVV*DQCTLTEFFCLTSQVTLTW 507 L LTQ C RSL L L W Q LEWV P +++ E S V L + Sbjct: 179 LSLTQGCQGERSLAASAGL----LAWPQSQLEWVRPGIIMYGVSPFVE----KSAVQLGY 230 Query: 508 ARISLFSSALCANISHIKPDQTMWY 582 + S L A + +K +++ Y Sbjct: 231 QPVMTLKSHLIA-VREVKAGESVGY 254
>Y329_METJA (Q57775) Hypothetical protein MJ0329| Length = 616 Score = 30.8 bits (68), Expect = 3.2 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Frame = +3 Query: 6 QYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVAD-DSNKTV 182 Q N + + +L V + IIG+ Q+ I++ + N R + A D K Sbjct: 175 QKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFE 234 Query: 183 TVSLWNDLATTLGEELLDMVDSAPIV----AIKSLKVSDFQGVSVSTVGKSTLVI 335 T+S+ D+ T L E +L DSA + +I +K S + + TV ++ L I Sbjct: 235 TISIGKDIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRI 289
>RPA_METJA (Q58559) Replication factor A (RP-A) (RF-A) (Replication factor-A| protein 1) (Single-stranded DNA-binding protein) (mjaSSB) Length = 645 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = +3 Query: 63 VDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSLWNDLA 209 V+I GV+ +S + +R+ + KR I +AD S T+ ++LW+DLA Sbjct: 78 VEITGVITDISEIKTFKRRDGSLGKYKR-ITIADKSG-TIRMTLWDDLA 124
>Y855_TREPA (O83827) Hypothetical protein TP0855 precursor| Length = 1127 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -2 Query: 478 RKTLSEYIDLKPPALDAPIPAPTDAKEVPLPSDS 377 R+ L+E L PPA A P+P A + P+PS + Sbjct: 528 RRALAETESLSPPADTASTPSPGGAGDTPVPSQA 561
>SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 834 Score = 30.4 bits (67), Expect = 4.2 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +3 Query: 78 VVQSVSPTLSIRRKIDNE-SIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSA- 251 VV++ P +R D E ++ D+V+ADDS + +T +GE D++ A Sbjct: 288 VVRTAKPGEKLRTLDDTERTLDAEDVVIADDSGAVSLAGIMGGASTEVGEGTTDVLLEAA 347 Query: 252 ---PIVAIKSLKVSDFQGVSVSTVGKS-TLVINPEL 347 P++ ++ + + VS GK V++PE+ Sbjct: 348 TWNPLLVYRTAR----RHKLVSEAGKRYERVVDPEI 379
>ZN645_HUMAN (Q8N7E2) Zinc finger protein 645| Length = 425 Score = 30.0 bits (66), Expect = 5.4 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +3 Query: 477 LSHITSDPNLGQDKPV--FFSPVCQHKPHQA*PDHVVPRLHH 596 + HI ++ + G KP + P CQ +P + P H++P+ H Sbjct: 240 VDHIQNNSDSGAKKPTPPDYYPECQSQPAVSSPHHIIPQKQH 281
>DAP1_MOUSE (Q91XC8) Death-associated protein 1 (DAP-1)| Length = 102 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 471 VFLSHITSDPNLGQDKPVFFSPVCQHKPHQA*PDHVVPRLHHLQQ 605 VF+S + + + +D P + V KPH + HV PR H+QQ Sbjct: 57 VFISGVIARGD--KDFPPAAAQVAHQKPHASMDKHVSPRTQHIQQ 99
>IF2_COXBU (Q83BS1) Translation initiation factor IF-2| Length = 803 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Frame = +3 Query: 66 DIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVS---LWNDLATTLGEELLD 236 ++I + + ++I ++ID E+ IVV + +K + L +L TLGE+ + Sbjct: 243 EVIKAMMKLGAMVTINQRIDQETAA---IVVEEMGHKPKLIKEDVLEENLVATLGEQTGE 299 Query: 237 MVDSAPIVAI 266 V AP+V I Sbjct: 300 AVPRAPVVTI 309
>RIPK5_RAT (Q6XUX2) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 927 Score = 29.6 bits (65), Expect = 7.1 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 8/91 (8%) Frame = +3 Query: 129 ESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVD--------SAPIVAIKSLKVS 284 E+IP+ D+ V +DS T V DL T+ LL VD P V + S + Sbjct: 185 ETIPEEDLEVQEDSEDTARVLA--DLEVTMHHALLQEVDIVVAPCHSHRPAVDVLSDLAN 242 Query: 285 DFQGVSVSTVGKSTLVINPELPETEKLRAWY 377 DF V + K L E E +++R ++ Sbjct: 243 DFLPVITYALHKDELSERDE-QELQEIRKYF 272
>PRDM2_HUMAN (Q13029) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) (MTE-binding protein) (MTB-ZF) (GATA-3-binding protein G3B) Length = 1718 Score = 29.6 bits (65), Expect = 7.1 Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 6/133 (4%) Frame = -2 Query: 445 PPALDAPIPAPTDAKEVPLPSDSYQALSFSVSGNSGLITS-----VLLPTVETDTP*KSD 281 PP L P P VPLP+ S A T+ +L PTV Sbjct: 977 PPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPP 1036 Query: 280 TFRLLIATIGAESTMSNSSSPRVVARSFQRETVTVLFESSATTMSRFGIDSLSIFLLILR 101 L+ A T+S+SSS + SF SS+++ S LS ++ Sbjct: 1037 VEPLMSAASPGPPTLSSSSSSSSSSSSF----------SSSSSSSSPSPPPLSAISSVVS 1086 Query: 100 VGDTL*TT-PMIS 65 GD L + PMIS Sbjct: 1087 SGDNLEASLPMIS 1099
>OR4CG_HUMAN (Q8NGL9) Olfactory receptor 4C16 (Olfactory receptor OR11-135)| Length = 310 Score = 29.6 bits (65), Expect = 7.1 Identities = 19/78 (24%), Positives = 36/78 (46%) Frame = -2 Query: 325 VLLPTVETDTP*KSDTFRLLIATIGAESTMSNSSSPRVVARSFQRETVTVLFESSATTMS 146 +++ +V+T K+ F L +++ +S S +PR++ + ++T E S Sbjct: 42 LIIISVKTSQALKNPMFFFLFYLSLSDTCLSTSITPRMIVDALLKKTTISFSECMIQVFS 101 Query: 145 RFGIDSLSIFLLILRVGD 92 L IF+LIL D Sbjct: 102 SHVFGCLEIFILILTAVD 119
>LYAG_HUMAN (P10253) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) (Aglucosidase alfa) [Contains: 76 kDa lysosomal alpha-glucosidase; 70 kDa lysosomal alpha-glucosidase] Length = 952 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%) Frame = +1 Query: 157 LQMTQTRPSQFLFGMI--LPPLLVKSCWTWLTL 249 LQ++ + PSQ++ G+ L PL++ + WT +TL Sbjct: 246 LQLSTSLPSQYITGLAEHLSPLMLSTSWTRITL 278
>DAP1_RAT (Q9QX67) Death-associated protein 1 (DAP-1) (Rap7a)| Length = 102 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 510 QDKPVFFSPVCQHKPHQA*PDHVVPRLHHLQQ 605 +D P + V KPH + HV PR H+QQ Sbjct: 68 KDFPPAAAQVAHQKPHASMDKHVSPRTQHIQQ 99
>URA7_YEAST (P28274) CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP| synthetase 1) Length = 579 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = +3 Query: 18 VKIDMLGPYVGGRELVDIIGVVQSVS-PTLSIRRKIDNESIPKRDIVV-ADDSNKTVTVS 191 VKI ++G Y ++ + V++++ ++ RRK+D + + D+ A +SNKT Sbjct: 304 VKIALVGKYTNLKD--SYLSVIKALEHSSMKCRRKLDIKWVEATDLEPEAQESNKTKFHE 361 Query: 192 LWNDLATTLG 221 WN ++T G Sbjct: 362 AWNMVSTADG 371
>CLS_CLOPE (Q9ZNC6) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)| (CL synthase) Length = 476 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 5/50 (10%) Frame = +3 Query: 117 KIDNESIPKRDIVVADDSNKTVTVSLWNDL-----ATTLGEELLDMVDSA 251 K+DN S+ +D+++ + +N T + ND+ A +L EE++D ++ A Sbjct: 83 KLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANSLFEEMIDEINKA 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,232,589 Number of Sequences: 219361 Number of extensions: 1828731 Number of successful extensions: 5935 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5918 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
