ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16l01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB111916.1| Oryza sativa (japonica cultivar-group) OsRPA70b ... 383 e-103
2gb|AF009179.1|AF009179 Oryza sativa replication protein A1 (Os-R... 383 e-103
3dbj|AK060582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-100
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 7e-25
5gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome... 123 7e-25
6gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome... 123 7e-25
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
8ref|NM_120884.1| Arabidopsis thaliana DNA binding / nucleic acid... 72 2e-09
9gb|BT017328.1| Zea mays clone EL01N0320F08.c mRNA sequence 70 9e-09
10gb|AY105460.1| Zea mays PCO107885 mRNA sequence 70 9e-09
11gb|AY111108.1| Zea mays CL11267_1 mRNA sequence 66 1e-07
12emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BA... 64 6e-07
13emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, B... 64 6e-07
14emb|X77079.1|ESCU3 E.schoeniclus DNA repeat region (Escu3 locus) 44 0.53
15gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, comp... 42 2.1
16gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone ... 42 2.1
17gb|AC004253.2| Homo sapiens chromosome 17, clone CTC-542B22, com... 42 2.1
18gb|AC129917.6| Homo sapiens chromosome 17, clone RP11-279B10, co... 42 2.1
19emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in ... 42 2.1
20emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in ... 42 2.1
21emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 ... 42 2.1
22gb|AF027686.1|AF027686 Onobrychis viciifolia glycine-rich protei... 42 2.1
23gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Canc... 40 8.2
24gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hosp... 40 8.2
25gb|AC150651.3| Bos taurus BAC CH240-451E16 (Children's Hospital... 40 8.2
26gb|AY288927.2| Enterobacteria phage SP6, complete genome 40 8.2
27gb|AY370673.1| Enterobacteria phage SP6, complete genome 40 8.2
28emb|CR384059.21| Zebrafish DNA sequence from clone DKEYP-50B9 in... 40 8.2
29emb|Z80218.1|CEF52D4 Caenorhabditis elegans Cosmid F52D4, comple... 40 8.2
30gb|AC006088.1| Homo sapiens 12q24.1 PAC RP1-305I20 (Roswell Park... 40 8.2
31gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Can... 40 8.2
32gb|AC096537.3| Homo sapiens chromosome 1 clone RP11-100E13, comp... 40 8.2
33gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, comple... 40 8.2
34gb|AF363579.1|AF363579 Ginglymostoma cirratum transporter associ... 40 8.2
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
36gb|AC154296.2| Mus musculus BAC clone RP23-424C4 from chromosome... 40 8.2
37gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, compl... 40 8.2
38gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, comple... 40 8.2
39gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, comple... 40 8.2
40dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
41gb|AF193539.1|AF193539 Emberiza citrinella clone Escu3 microsate... 40 8.2
42dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.2
43dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
44emb|AL844845.7| Mouse DNA sequence from clone RP23-155C1 on chro... 40 8.2
45emb|AJ000727.1|MRAJ727 Microtus rossiaemeridionalis DNA for B1, ... 40 8.2
46gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, comple... 40 8.2 
>dbj|AB111916.1| Oryza sativa (japonica cultivar-group) OsRPA70b mRNA for replication
            protein A 70b, complete cds
          Length = 1928

 Score =  383 bits (193), Expect = e-103
 Identities = 497/597 (83%), Gaps = 1/597 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtagat 68
            ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||||
Sbjct: 914  tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtagat 973

                                                                        
Query: 69   atcattggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaat 128
             | ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| 
Sbjct: 974  gttattggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaac 1033

                                                                        
Query: 129  gagtcaattccaaagcgtgacattgttgttgcagatgactcaaacaagaccgtcacagtt 188
            ||| | ||||||||||||||||| ||||| || |||||||| | ||| || || ||  | 
Sbjct: 1034 gagacgattccaaagcgtgacatcgttgtagcggatgactcgagcaaaactgtaaccata 1093

                                                                        
Query: 189  tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
            ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 1094 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 1153

                                                                        
Query: 249  gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaaggcgtgtctgtctct 308
            || |||||| |||| || |||||||| |||||||||||||| |||||  ||||| | || 
Sbjct: 1154 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaaggtttgtctctgtca 1213

                                                                        
Query: 309  acagtaggcaagagtacacttgttattaacccagagttgcctgagactgagaagcttaga 368
            || || || |  |||||| ||||  | || || || ||||||||| | ||  |||| |||
Sbjct: 1214 actgtggggagaagtacaattgtactgaatcctgacttgcctgaggcagaacagctcaga 1273

                                                                        
Query: 369  gcctggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggt 428
            || |||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| 
Sbjct: 1274 gcttggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggc 1333

                                                                        
Query: 429  gcatccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatc 488
            ||||| || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||
Sbjct: 1334 gcatcaagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatc 1393

                                                                        
Query: 489  acaagtgaccctaacttgggccaggataagcctgttttcttcagccctgtgtgccaacat 548
            ||||||||||| |||||||| |||||||||||||| ||||||||  |||  |||| | ||
Sbjct: 1394 acaagtgaccccaacttgggtcaggataagcctgtgttcttcag-tctgaatgcctatat 1452

                                                                     
Query: 549  aagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
             ||||  |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 1453 tagccttatcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 1509
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>gb|AF009179.1|AF009179 Oryza sativa replication protein A1 (Os-RPA1) mRNA, complete cds
          Length = 2274

 Score =  383 bits (193), Expect = e-103
 Identities = 497/597 (83%), Gaps = 1/597 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtagat 68
            ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||||
Sbjct: 961  tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtagat 1020

                                                                        
Query: 69   atcattggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaat 128
             | ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| 
Sbjct: 1021 gttattggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaac 1080

                                                                        
Query: 129  gagtcaattccaaagcgtgacattgttgttgcagatgactcaaacaagaccgtcacagtt 188
            ||| | ||||||||||||||||| ||||| || |||||||| | ||| || || ||  | 
Sbjct: 1081 gagacgattccaaagcgtgacatcgttgtagcggatgactcgagcaaaactgtaaccata 1140

                                                                        
Query: 189  tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
            ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 1141 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 1200

                                                                        
Query: 249  gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaaggcgtgtctgtctct 308
            || |||||| |||| || |||||||| |||||||||||||| |||||  ||||| | || 
Sbjct: 1201 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaaggtttgtctctgtca 1260

                                                                        
Query: 309  acagtaggcaagagtacacttgttattaacccagagttgcctgagactgagaagcttaga 368
            || || || |  |||||| ||||  | || || || ||||||||| | ||  |||| |||
Sbjct: 1261 actgtggggagaagtacaattgtagtgaatcctgacttgcctgaggcagaacagctcaga 1320

                                                                        
Query: 369  gcctggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggt 428
            || |||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| 
Sbjct: 1321 gcttggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggc 1380

                                                                        
Query: 429  gcatccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatc 488
            ||||| || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||
Sbjct: 1381 gcatcaagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatc 1440

                                                                        
Query: 489  acaagtgaccctaacttgggccaggataagcctgttttcttcagccctgtgtgccaacat 548
            ||||||||||| |||||||| |||||||||||||| ||||||||  |||  |||| | ||
Sbjct: 1441 acaagtgaccccaacttgggtcaggataagcctgtgttcttcag-tctgaatgcctatat 1499

                                                                     
Query: 549  aagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
             ||||  |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 1500 tagccttatcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 1556
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>dbj|AK060582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H05, full
            insert sequence
          Length = 2221

 Score =  375 bits (189), Expect = e-100
 Identities = 496/597 (83%), Gaps = 1/597 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtagat 68
            ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||||
Sbjct: 996  tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtagat 1055

                                                                        
Query: 69   atcattggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaat 128
             | ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| 
Sbjct: 1056 gttattggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaac 1115

                                                                        
Query: 129  gagtcaattccaaagcgtgacattgttgttgcagatgactcaaacaagaccgtcacagtt 188
            ||| | ||||||||||||||||| ||||| || |||||||| | ||| || || ||  | 
Sbjct: 1116 gagacgattccaaagcgtgacatcgttgtagcggatgactcgagcaaaactgtaaccata 1175

                                                                        
Query: 189  tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
            ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 1176 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 1235

                                                                        
Query: 249  gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaaggcgtgtctgtctct 308
            || |||||| |||| || |||||||| |||||||||||||| |||||  ||||| | || 
Sbjct: 1236 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaaggtttgtctctgtca 1295

                                                                        
Query: 309  acagtaggcaagagtacacttgttattaacccagagttgcctgagactgagaagcttaga 368
            || || || |  |||||| ||||  | || || || ||||||||| | ||  |||| |||
Sbjct: 1296 actgtggggagaagtacaattgtagtgaatcctgacttgcctgaggcagaacagctcaga 1355

                                                                        
Query: 369  gcctggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggt 428
            || |||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| 
Sbjct: 1356 gcttggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggc 1415

                                                                        
Query: 429  gcatccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatc 488
            ||||| || | ||||||   |||||| ||||||  |||  ||||||||||||||||||||
Sbjct: 1416 gcatcaagggttggtggcgcgagatccatgtacagtgatggagtttttctgtctcacatc 1475

                                                                        
Query: 489  acaagtgaccctaacttgggccaggataagcctgttttcttcagccctgtgtgccaacat 548
            ||||||||||| |||||||| |||||||||||||| ||||||||  |||  |||| | ||
Sbjct: 1476 acaagtgaccccaacttgggtcaggataagcctgtgttcttcag-tctgaatgcctatat 1534

                                                                     
Query: 549  aagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
             ||||  |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 1535 tagccttatcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 1591
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                           
Query: 373     ggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggtgcat 432
               ||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| ||||
Sbjct: 5950036 ggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcat 5950095

                                                                           
Query: 433     ccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatcacaa 492
               | || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||||||
Sbjct: 5950096 caagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaa 5950155

                                         
Query: 493     gtgaccctaacttgggccaggataag 518
               ||||||| |||||||| |||||||||
Sbjct: 5950156 gtgaccccaacttgggtcaggataag 5950181



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                           
Query: 189     tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
               ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 5949688 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 5949747

                                                              
Query: 249     gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaagg 295
               || |||||| |||| || |||||||| |||||||||||||| |||||
Sbjct: 5949748 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaagg 5949794



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                           
Query: 72      attggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
               ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| |||
Sbjct: 5949476 attggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgag 5949535

                                                     
Query: 132     tcaattccaaagcgtgacattgttgttgcagatgactc 169
                | ||||||||||||||||| ||||| || ||||||||
Sbjct: 5949536 acgattccaaagcgtgacatcgttgtagcggatgactc 5949573



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 9       tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtag 66
               ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||
Sbjct: 5949325 tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtag 5949382



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 556     atcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
               |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 5950323 atcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 5950372
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>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0085F02, complete sequence
          Length = 128535

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                         
Query: 373   ggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggtgcat 432
             ||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| ||||
Sbjct: 99658 ggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcat 99717

                                                                         
Query: 433   ccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatcacaa 492
             | || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||||||
Sbjct: 99718 caagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaa 99777

                                       
Query: 493   gtgaccctaacttgggccaggataag 518
             ||||||| |||||||| |||||||||
Sbjct: 99778 gtgaccccaacttgggtcaggataag 99803



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                         
Query: 189   tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
             ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 99310 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 99369

                                                            
Query: 249   gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaagg 295
             || |||||| |||| || |||||||| |||||||||||||| |||||
Sbjct: 99370 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaagg 99416



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                         
Query: 72    attggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
             ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| |||
Sbjct: 99098 attggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgag 99157

                                                   
Query: 132   tcaattccaaagcgtgacattgttgttgcagatgactc 169
              | ||||||||||||||||| ||||| || ||||||||
Sbjct: 99158 acgattccaaagcgtgacatcgttgtagcggatgactc 99195



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 9     tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtag 66
             ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||
Sbjct: 98947 tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtag 99004



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 556   atcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
             |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 99945 atcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 99994
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>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
            complete sequence
          Length = 111961

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                        
Query: 373  ggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggtgcat 432
            ||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| ||||
Sbjct: 8571 ggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcat 8630

                                                                        
Query: 433  ccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatcacaa 492
            | || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||||||
Sbjct: 8631 caagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaa 8690

                                      
Query: 493  gtgaccctaacttgggccaggataag 518
            ||||||| |||||||| |||||||||
Sbjct: 8691 gtgaccccaacttgggtcaggataag 8716



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
            ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 8223 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 8282

                                                           
Query: 249  gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaagg 295
            || |||||| |||| || |||||||| |||||||||||||| |||||
Sbjct: 8283 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaagg 8329



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                        
Query: 72   attggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
            ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| |||
Sbjct: 8011 attggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgag 8070

                                                  
Query: 132  tcaattccaaagcgtgacattgttgttgcagatgactc 169
             | ||||||||||||||||| ||||| || ||||||||
Sbjct: 8071 acgattccaaagcgtgacatcgttgtagcggatgactc 8108



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                      
Query: 9    tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtag 66
            ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||
Sbjct: 7860 tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtag 7917



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 556  atcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
            |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 8858 atcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 8907
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                           
Query: 373     ggtatgaatctgaaggcaagggtacttccttggcatcagttggtgctggaatgggtgcat 432
               ||||||| ||||||||||||||||||||  |||||||| ||||| | |  ||||| ||||
Sbjct: 5949249 ggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcat 5949308

                                                                           
Query: 433     ccagcgctggtggtttgagatcaatgtactctgacagagtttttctgtctcacatcacaa 492
               | || | ||||||   |||||| ||||||  ||| |||||||||||||||||||||||||
Sbjct: 5949309 caagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaa 5949368

                                         
Query: 493     gtgaccctaacttgggccaggataag 518
               ||||||| |||||||| |||||||||
Sbjct: 5949369 gtgaccccaacttgggtcaggataag 5949394



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                           
Query: 189     tctctttggaatgatcttgccaccactcttggtgaagagctgttggacatggttgactct 248
               ||||||||||||||||||||||| |||  |||| | ||||| ||||||||||| ||||||
Sbjct: 5948901 tctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactct 5948960

                                                              
Query: 249     gcacctatcgttgcaatcaagagcctgaaagtatctgactttcaagg 295
               || |||||| |||| || |||||||| |||||||||||||| |||||
Sbjct: 5948961 gcgcctatcattgcgataaagagcctaaaagtatctgacttccaagg 5949007



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                           
Query: 72      attggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
               ||||| ||||||||||| ||||| |||||||| ||| | || |||||||| ||||| |||
Sbjct: 5948689 attggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgag 5948748

                                                     
Query: 132     tcaattccaaagcgtgacattgttgttgcagatgactc 169
                | ||||||||||||||||| ||||| || ||||||||
Sbjct: 5948749 acgattccaaagcgtgacatcgttgtagcggatgactc 5948786



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 9       tacaactttgttaagattgatatgctggggccatatgttggtggcagggagttagtag 66
               ||||||||||| |||||||||  ||| |||||||||||||||||||||||| ||||||
Sbjct: 5948538 tacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtag 5948595



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 556     atcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
               |||||||||||||| |||||||||||||| |||||||  |||||||||||
Sbjct: 5949536 atcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaa 5949585
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>ref|NM_120884.1| Arabidopsis thaliana DNA binding / nucleic acid binding AT5G08020
            mRNA, complete cds
          Length = 1815

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 127/156 (81%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                        
Query: 450  agatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaacttgggc 509
            ||||| ||||| ||||||||||||||||| ||||||||||||||  | ||    || |||
Sbjct: 1264 agatccatgtattctgacagagtttttctttctcacatcacaagcaatccctctttaggc 1323

                                                                        
Query: 510  caggataagcctgttttcttcagccctgtgtgccaacataagccacatcaagcctgacca 569
             |||| |||||||| ||||||||| ||  | ||  ||||||||  ||||||||| |||||
Sbjct: 1324 gaggagaagcctgtattcttcagcact-agagcttacataagcttcatcaagccagacca 1382

                                                
Query: 570  gaccatgtggtaccgcgcttgcaccacctgcaacaa 605
             || ||||||||||| |||||||  ||||| |||||
Sbjct: 1383 aacaatgtggtaccgtgcttgcaagacctgtaacaa 1418



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 75  ggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
           ||||||||||| ||||| || |||||  |||| || |||||||||| ||||||||||
Sbjct: 889 ggtgttgttcaaagtgtttctcctaccatgagcattagaaggaagaacgacaatgag 945
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>gb|BT017328.1| Zea mays clone EL01N0320F08.c mRNA sequence
          Length = 821

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 535 ctgtgtgccaacataagccacatcaagcctgaccagaccatgtggtaccgcgcttgcac 593
           |||| ||||| ||||||||||||||||||||| ||||  ||||||||||| ||||||||
Sbjct: 2   ctgtatgccatcataagccacatcaagcctgatcagaatatgtggtaccgtgcttgcac 60
to top
>gb|AY105460.1| Zea mays PCO107885 mRNA sequence
          Length = 840

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 547 ataagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
           |||||||||||||||||||| ||||  ||||||||||| |||||||| ||||| |||||
Sbjct: 829 ataagccacatcaagcctgatcagaatatgtggtaccgtgcttgcacgacctgtaacaa 771
to top
>gb|AY111108.1| Zea mays CL11267_1 mRNA sequence
          Length = 747

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 557 tcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaacaa 605
           ||||||||||||||| |||||||||||| |||||||  |||||||||||
Sbjct: 732 tcaagcctgaccagaacatgtggtaccgtgcttgcaagacctgcaacaa 684
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>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA
           project)
          Length = 89988

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 450 agatcaatgtactctgacagagtttttctgtctcacatcacaag 493
           ||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 725 agatccatgtattctgacagagtttttctttctcacatcacaag 768



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 545 acataagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaaca 604
           ||||||||  ||||||||| ||||| || ||||||||||| |||||||  ||||| ||||
Sbjct: 897 acataagcttcatcaagccagaccaaacaatgtggtaccgtgcttgcaagacctgtaaca 956

            
Query: 605 a 605
           |
Sbjct: 957 a 957



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 75  ggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
           ||||||||||| ||||| || |||||  |||| || |||||||||| ||||||||||
Sbjct: 267 ggtgttgttcaaagtgtttctcctaccatgagcattagaaggaagaacgacaatgag 323
to top
>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project)
          Length = 88095

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 450   agatcaatgtactctgacagagtttttctgtctcacatcacaag 493
             ||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 80967 agatccatgtattctgacagagtttttctttctcacatcacaag 81010



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 545   acataagccacatcaagcctgaccagaccatgtggtaccgcgcttgcaccacctgcaaca 604
             ||||||||  ||||||||| ||||| || ||||||||||| |||||||  ||||| ||||
Sbjct: 81139 acataagcttcatcaagccagaccaaacaatgtggtaccgtgcttgcaagacctgtaaca 81198

              
Query: 605   a 605
             |
Sbjct: 81199 a 81199



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 75    ggtgttgttcagagtgtatcacctactctgagtatcagaaggaagatcgacaatgag 131
             ||||||||||| ||||| || |||||  |||| || |||||||||| ||||||||||
Sbjct: 80509 ggtgttgttcaaagtgtttctcctaccatgagcattagaaggaagaacgacaatgag 80565
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>emb|X77079.1|ESCU3 E.schoeniclus DNA repeat region (Escu3 locus)
          Length = 360

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 458 gtactctgacagagtttttctg 479
           ||||||||||||||||||||||
Sbjct: 1   gtactctgacagagtttttctg 22
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>gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, complete sequence
          Length = 188453

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   tttcttcagccctgtgtgcca 544
             |||||||||||||||||||||
Sbjct: 35844 tttcttcagccctgtgtgcca 35824
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>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete
              sequence
          Length = 245536

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    aagaccgtcacagtttctctt 194
              |||||||||||||||||||||
Sbjct: 151420 aagaccgtcacagtttctctt 151400
to top
>gb|AC004253.2| Homo sapiens chromosome 17, clone CTC-542B22, complete sequence
          Length = 130724

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 200  tgatcttgccaccactcttgg 220
            |||||||||||||||||||||
Sbjct: 5368 tgatcttgccaccactcttgg 5388
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>gb|AC129917.6| Homo sapiens chromosome 17, clone RP11-279B10, complete sequence
          Length = 118759

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   tgatcttgccaccactcttgg 220
             |||||||||||||||||||||
Sbjct: 10052 tgatcttgccaccactcttgg 10032
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>emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in linkage group 20,
             complete sequence
          Length = 183151

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 514   ataagcctgttttcttcagcc 534
             |||||||||||||||||||||
Sbjct: 83887 ataagcctgttttcttcagcc 83907
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>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17,
             complete sequence
          Length = 156881

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   tgacattgttgttgcagatga 166
             |||||||||||||||||||||
Sbjct: 73203 tgacattgttgttgcagatga 73183
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>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17,
             complete sequence
          Length = 154493

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   tgacattgttgttgcagatga 166
             |||||||||||||||||||||
Sbjct: 38233 tgacattgttgttgcagatga 38253
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>gb|AF027686.1|AF027686 Onobrychis viciifolia glycine-rich protein mRNA, complete cds
          Length = 778

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 410 agttggtgctggaatgggtgc 430
           |||||||||||||||||||||
Sbjct: 253 agttggtgctggaatgggtgc 273
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>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224115

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    aatctgaaggcaagggtact 398
              ||||||||||||||||||||
Sbjct: 110302 aatctgaaggcaagggtact 110283
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>gb|AC169705.1| Rhesus Macaque  BAC CH250-174C17 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 181644

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aatacaactttgttaagatt 26
             ||||||||||||||||||||
Sbjct: 45617 aatacaactttgttaagatt 45636
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>gb|AC150651.3| Bos taurus  BAC CH240-451E16 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    gagttgcctgagactgagaa 361
              ||||||||||||||||||||
Sbjct: 129058 gagttgcctgagactgagaa 129039
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>gb|AY288927.2| Enterobacteria phage SP6, complete genome
          Length = 43769

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 392   gggtacttccttggcatcagttgg 415
             ||||||||||| ||||||||||||
Sbjct: 35462 gggtacttcctcggcatcagttgg 35485
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>gb|AY370673.1| Enterobacteria phage SP6, complete genome
          Length = 43769

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 392   gggtacttccttggcatcagttgg 415
             ||||||||||| ||||||||||||
Sbjct: 35462 gggtacttcctcggcatcagttgg 35485
to top
>emb|CR384059.21| Zebrafish DNA sequence from clone DKEYP-50B9 in linkage group 25,
             complete sequence
          Length = 98492

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   acattgttgttgcagatgac 167
             ||||||||||||||||||||
Sbjct: 18649 acattgttgttgcagatgac 18630
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>emb|Z80218.1|CEF52D4 Caenorhabditis elegans Cosmid F52D4, complete sequence
          Length = 6325

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  acagagtttttctgtctcac 485
            ||||||||||||||||||||
Sbjct: 2178 acagagtttttctgtctcac 2159
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>gb|AC006088.1| Homo sapiens 12q24.1 PAC RP1-305I20 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 122605

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   cagtttctctttggaatgat 203
             ||||||||||||||||||||
Sbjct: 70159 cagtttctctttggaatgat 70140
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>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 174974

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    cagtttctctttggaatgat 203
              ||||||||||||||||||||
Sbjct: 146199 cagtttctctttggaatgat 146218
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>gb|AC096537.3| Homo sapiens chromosome 1 clone RP11-100E13, complete sequence
          Length = 163746

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 479   gtctcacatcacaagtgaccctaa 502
             |||||||||||||| |||||||||
Sbjct: 56567 gtctcacatcacaaatgaccctaa 56590
to top
>gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, complete sequence
          Length = 170363

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    agagtttttctgtctcacat 487
              ||||||||||||||||||||
Sbjct: 105238 agagtttttctgtctcacat 105257
to top
>gb|AF363579.1|AF363579 Ginglymostoma cirratum transporter associated with antigen
           processing TAP1 mRNA, complete cds
          Length = 2852

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 461 ctctgacagagtttttctgt 480
           ||||||||||||||||||||
Sbjct: 808 ctctgacagagtttttctgt 827
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 139      caaagcgtgacattgttgtt 158
                ||||||||||||||||||||
Sbjct: 10109614 caaagcgtgacattgttgtt 10109633
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>gb|AC154296.2| Mus musculus BAC clone RP23-424C4 from chromosome 9, complete sequence
          Length = 194303

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    acattgttgttgcagatgac 167
              ||||||||||||||||||||
Sbjct: 120367 acattgttgttgcagatgac 120348
to top
>gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, complete sequence
          Length = 166892

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    tctgagtatcagaaggaaga 120
              ||||||||||||||||||||
Sbjct: 131104 tctgagtatcagaaggaaga 131123
to top
>gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, complete sequence
          Length = 187848

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   agccacatcaagcctgacca 569
             ||||||||||||||||||||
Sbjct: 42385 agccacatcaagcctgacca 42404
to top
>gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, complete sequence
          Length = 169453

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   acatggttgactctgcacct 254
             ||||||||||||||||||||
Sbjct: 27841 acatggttgactctgcacct 27860
to top
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0491D10
          Length = 162039

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   caaagcgtgacattgttgtt 158
             ||||||||||||||||||||
Sbjct: 75980 caaagcgtgacattgttgtt 75999
to top
>gb|AF193539.1|AF193539 Emberiza citrinella clone Escu3 microsatellite sequence
          Length = 133

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 460 actctgacagagtttttctg 479
           ||||||||||||||||||||
Sbjct: 1   actctgacagagtttttctg 20
to top
>dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-721F8, complete
              sequence
          Length = 161871

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aatacaactttgttaagatt 26
              ||||||||||||||||||||
Sbjct: 145497 aatacaactttgttaagatt 145516
to top
>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
             sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aatacaactttgttaagatt 26
             ||||||||||||||||||||
Sbjct: 23651 aatacaactttgttaagatt 23670
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>emb|AL844845.7| Mouse DNA sequence from clone RP23-155C1 on chromosome 2, complete
             sequence
          Length = 112100

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    gccatatgttggtggcaggg 57
             ||||||||||||||||||||
Sbjct: 43859 gccatatgttggtggcaggg 43878
to top
>emb|AJ000727.1|MRAJ727 Microtus rossiaemeridionalis DNA for B1, B2-like elements and MaLRs
          Length = 3278

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 474  tttctgtctcacatcacaagtgac 497
            |||| |||||||||||||||||||
Sbjct: 1062 tttcagtctcacatcacaagtgac 1039
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>gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, complete sequence
          Length = 183967

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   agagtttttctgtctcacat 487
             ||||||||||||||||||||
Sbjct: 95409 agagtttttctgtctcacat 95428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,330,514
Number of Sequences: 3902068
Number of extensions: 5330514
Number of successful extensions: 88237
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88006
Number of HSP's gapped (non-prelim): 221
length of query: 605
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 582
effective length of database: 17,143,297,704
effective search space: 9977399263728
effective search space used: 9977399263728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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