>VL96_IRV1 (P22856) L96 protein|
          Length = 867

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 23/54 (42%), Positives = 29/54 (53%)
 Frame = -3

Query: 553 SPFYLAHMCAVQVF*TATPRLAVASWNPPPLILETVFPSVAPRKQPSCSCSVVP 392
           +P Y A   AV    T TP +A  S  PPP I+ ++ PSV P   PS   S+VP
Sbjct: 743 TPLY-AEPIAVLENETPTPSIA-PSIRPPPSIIPSIAPSVRPSIAPSVRPSIVP 794

>MRS2_GIBZE (Q4I298) Inner membrane magnesium transporter MRS2, mitochondrial|
           precursor (RNA-splicing protein MRS2)
          Length = 498

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 469 VDSKMPQRVLESLFKIPERR--TYEPSKMDWKKVVKKLQSYNHPITASNQ-ERPKNGDGY 639
           V S+   R L SL    ERR  T EPS  D   V +KL   N P+T+ N     +N  G+
Sbjct: 9   VPSRSLLRFLRSLTTACERRVTTVEPSLFDKDPVTRKLPDRNQPLTSQNHFSTSRNAQGF 68

>ADAM2_CAVPO (Q60411) ADAM 2 precursor (A disintegrin and metalloproteinase|
           domain 2) (Fertilin beta subunit) (PH-30) (PH30)
          Length = 735

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +2

Query: 248 HPLQISSQEMDYLKK-----NLLQVFKRVHASSQKKYLVCHTITPKGNMNSSGGNNRAAT 412
           +P++  +++  YLKK     N++   K + +S +  Y+  H I  K      GGN    T
Sbjct: 143 YPVKHDNEKSQYLKKSINVKNVVYKIKSIKSSVRTHYIEMHIIVEKNLYKHMGGNTATVT 202

Query: 413 *RLF 424
            ++F
Sbjct: 203 EKIF 206

>YAS9_SCHPO (Q10145) Hypothetical RNA-binding protein C3H8.09c in chromosome I|
          Length = 738

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +1

Query: 346 GMSYNHSERQHEFFWGEQQSSYMKAVCEVQHSETPSPRSAVVDSKMPQRVLESLFKIPE 522
           G S+     Q +F   E   +Y +   E  HS+    RS+V  +K  Q++LE L ++ +
Sbjct: 677 GGSFGTITSQSQFVVNEMPKNYARDNYEALHSQESRQRSSVAGNKQLQKILEQLAELKQ 735

>SYD_ANASP (Q8YUB6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 595

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
 Frame = +1

Query: 76  EEAEQFLCSMLGDRSELSMGVVRDVLGQSGYDVEQALDALLDISGMGWCIPNDEMNGS-S 252
           E  E++ C     R +L +  V DV+  SG+ V +  DA+ +  G+   +P    N   S
Sbjct: 282 EAMERYGCDKPDTRYDLQLVNVSDVMKDSGFKVFR--DAVAN-GGIVKILPIPNGNEQIS 338

Query: 253 SPNIFPGNGLFEEESAAS------IQKSPCQFPEEIPGMSYNHSERQHEFFWGEQQSSYM 414
           +  I PG  LF E S A       I+       + I  +  N SE Q       +Q    
Sbjct: 339 NVRIKPGGDLFREASEAGAKGLAYIRVREDGEIDTIGAIKDNLSEEQ-------KQEILQ 391

Query: 415 KAVCEVQHSETPSPRSAVVDSKMPQRVLESLFKIPERRTYEPSKM-----------DWKK 561
           +   +  H        AV  +K   R+ +++ K  E    +P K+           +W  
Sbjct: 392 RTGAKPGHLLLFGAGDAVTVNKTLDRLRQAIAK--EFGLIDPDKINLLWVVDFPMFEWNA 449

Query: 562 VVKKLQSYNHPITASNQE 615
             K+L++ +HP TA + +
Sbjct: 450 DEKRLEALHHPFTAPHPD 467

>CHD1_HUMAN (O14646) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD1) (CHD-1)
          Length = 1709

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +1

Query: 499  ESLFKIPERRTYEPSKMDWKKVVKKLQSYNH---PITASNQ 612
            E LFK PE    EP +MD  +++K+ +++ +   P+T  ++
Sbjct: 974  EELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDE 1014


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,654,869
Number of Sequences: 219361
Number of extensions: 2463575
Number of successful extensions: 5301
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5291
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)