ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464030.1| Oryza sativa (japonica cultivar-group), mRNA 230 4e-57
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
3dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
4dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clon... 230 4e-57
5dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
6dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 4e-57
7dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, compl... 230 4e-57
8gb|BT017945.1| Zea mays clone EL01N0521D09.c mRNA sequence 165 2e-37
9gb|AY104937.1| Zea mays PCO082324 mRNA sequence 161 3e-36
10gb|AY107790.1| Zea mays PCO082322 mRNA sequence 135 2e-28
11gb|AY085017.1| Arabidopsis thaliana clone 12455 mRNA, complete s... 66 2e-07
12gb|AF043526.1|AF043526 Arabidopsis thaliana 20S proteasome subun... 66 2e-07
13ref|NM_123644.3| Arabidopsis thaliana PAF1; endopeptidase/ pepti... 58 4e-05
14gb|AY113047.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, com... 58 4e-05
15gb|AF375447.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, com... 58 4e-05
16gb|AY058128.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, com... 58 4e-05
17emb|BX830176.1|CNS0A257 Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
18dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 4e-05
19dbj|AK059589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
20gb|M98495.1|ATHPSM30A Arabidopsis thaliana proteasome (PSM30) ge... 58 4e-05
21ref|NM_103619.3| Arabidopsis thaliana PAF2; endopeptidase/ pepti... 52 0.002
22emb|Y13182.1|ATY13182 Arabidopsis thaliana mRNA for proteasome s... 52 0.002
23gb|AY141996.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, comp... 52 0.002
24gb|AY057649.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, comp... 52 0.002
25gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G... 52 0.002
26gb|AF043527.1|AF043527 Arabidopsis thaliana 20S proteasome subun... 52 0.002
27gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 46 0.14
28emb|CR352769.1| Gallus gallus finished cDNA, clone ChEST436e2 46 0.14
29emb|AL359820.12| Human DNA sequence from clone RP11-455C19 on ch... 44 0.56
30gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EG... 40 8.7
31ref|XM_362409.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.7
32gb|AY588246.1| Homo sapiens epidermal growth factor receptor (er... 40 8.7
33emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 ... 40 8.7
34gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complet... 40 8.7
35gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, com... 40 8.7
36emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chro... 40 8.7
37emb|AL031667.21|HS620E11 Human DNA sequence from clone RP4-620E1... 40 8.7
38gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 40 8.7
39gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, compl... 40 8.7
40dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 8.7
41dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 8.7
42dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 8.7
43ref|NM_001037361.1| Rattus norvegicus similar to IQ motif contai... 40 8.7
44gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome... 40 8.7
45gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, compl... 40 8.7
46gb|AY148093.1| Magnaporthe grisea trehalose-6-phosphate synthase... 40 8.7
47gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7... 40 8.7
48ref|XM_573292.1| PREDICTED: Rattus norvegicus hematopoietic cell... 40 8.7
49gb|BC079081.1| Rattus norvegicus hematopoietic cell specific Lyn... 40 8.7
50ref|NM_001011898.1| Rattus norvegicus hematopoietic cell specifi... 40 8.7
51gb|AC158167.5| Mus musculus BAC clone RP23-432K4 from chromosome... 40 8.7
52gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complet... 40 8.7
53gb|BC083607.1| Rattus norvegicus similar to IQ motif containing ... 40 8.7
54emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chro... 40 8.7 
>ref|XM_464030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1079

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 518 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 577

                                                                       
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
           ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 578 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 637

                                                                       
Query: 121 tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
           |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 638 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 697

                                                                       
Query: 181 gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 698 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 757

                                                                       
Query: 241 gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
           |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 758 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 817

                                                                      
Query: 301 gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
           ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 818 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 870
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                           
Query: 1       gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
               |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 1787467 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 1787526

                                                                           
Query: 61      ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
               ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 1787527 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 1787586

                                                                           
Query: 121     tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
               |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 1787587 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 1787646

                                                                           
Query: 181     gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
               |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 1787647 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 1787706

                                                                           
Query: 241     gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
               |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 1787707 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 1787766

                                                                          
Query: 301     gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
               ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 1787767 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 1787819
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G11
          Length = 143943

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
              |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 105479 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 105538

                                                                          
Query: 61     ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
              ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 105539 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 105598

                                                                          
Query: 121    tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
              |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 105599 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 105658

                                                                          
Query: 181    gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
              |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 105659 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 105718

                                                                          
Query: 241    gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
              |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 105719 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 105778

                                                                         
Query: 301    gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
              ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 105779 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 105831
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>dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D06, full
           insert sequence
          Length = 1080

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 501 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 560

                                                                       
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
           ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 561 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 620

                                                                       
Query: 121 tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
           |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 621 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 680

                                                                       
Query: 181 gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 681 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 740

                                                                       
Query: 241 gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
           |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 741 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 800

                                                                      
Query: 301 gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
           ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 801 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 853
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
             |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 24111 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 24170

                                                                         
Query: 61    ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
             ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 24171 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 24230

                                                                         
Query: 121   tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
             |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 24231 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 24290

                                                                         
Query: 181   gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
             |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 24291 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 24350

                                                                         
Query: 241   gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
             |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 24351 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 24410

                                                                        
Query: 301   gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
             ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 24411 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 24463
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>dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B19, full
           insert sequence
          Length = 1079

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 518 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 577

                                                                       
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
           ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 578 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 637

                                                                       
Query: 121 tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
           |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 638 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 697

                                                                       
Query: 181 gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 698 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 757

                                                                       
Query: 241 gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
           |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 758 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 817

                                                                      
Query: 301 gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
           ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 818 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 870
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>dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, complete cds
          Length = 1045

 Score =  230 bits (116), Expect = 4e-57
 Identities = 298/359 (83%), Gaps = 6/359 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||
Sbjct: 503 gcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgctatt 562

                                                                       
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
           ||||| |||||||| || |||||||||| ||| || ||||||||||||   | ||||| |
Sbjct: 563 ggctctcgctctcaagccgccaagactttccttgagcgcagattcgagggctacaacgac 622

                                                                       
Query: 121 tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
           |||||||| ||  | || ||||| || || ||||| |||||||||||||| || ||||||
Sbjct: 623 tacaccccagagcaacttatcaaagatgccctctccgccataaaggagacgctgcaaggt 682

                                                                       
Query: 181 gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           |||||||| || ||||| ||||||||| |||| ||||| ||||||| ||| |||||||||
Sbjct: 683 gagaagctaaccagctccaactgcaccgttgctattgttggcagaaaggacgatggcacc 742

                                                                       
Query: 241 gttgagcctttctccatgatcgactccaagaggatccaggagatcatcgactccatggag 300
           |||||||| ||    |||||||||   ||||||||||| || || ||||| |||||||||
Sbjct: 743 gttgagccatttgagatgatcgacgtgaagaggatccaagaaataatcgattccatggag 802

                                                                      
Query: 301 gctgctgacgaggcgccagcggccgatgctccggctgaatcaagctcgatgcaggagga 359
           ||||| || ||||| |||||||| ||      |||||| || |||||||||||||||||
Sbjct: 803 gctgccgaggaggcaccagcggcaga------ggctgagtcgagctcgatgcaggagga 855
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>gb|BT017945.1| Zea mays clone EL01N0521D09.c mRNA sequence
          Length = 1171

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Plus

                                                                       
Query: 4   catctctactacaactgccccagtgggaactactttgagtaccaggcattcgccattggc 63
           ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 540 catctgtactacaactgccccagcgggaactactttgagtaccaggcattcgccatcggt 599

                                                                       
Query: 64  tcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcctac 123
           || || || || || |||||||||| ||| || ||||| ||| ||   | ||| | ||||
Sbjct: 600 tctcgttcccaagccgccaagactttcctggagcgcaggttccagggctacaatgactac 659

                                                                       
Query: 124 accccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggtgag 183
           ||||||||  |||||||||||||||| ||||| |||||||||||||| || || ||||||
Sbjct: 660 accccggagcagctcatcaaggacgccctctccgccataaaggagacactgcagggtgag 719

                                  
Query: 184 aagctgacgagctctaactgcac 206
           |||||| | ||||| ||||||||
Sbjct: 720 aagctgtccagctccaactgcac 742
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>gb|AY104937.1| Zea mays PCO082324 mRNA sequence
          Length = 1160

 Score =  161 bits (81), Expect = 3e-36
 Identities = 198/237 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   catctctactacaactgccccagtgggaactactttgagtaccaggcattcgccattggc 63
           ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| || 
Sbjct: 570 catctgtactacaactgccccagcgggaactactttgagtaccaggcatttgccatcggt 629

                                                                       
Query: 64  tcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcctac 123
           || || || || || |||||||||| ||| || ||||| ||| ||   | ||| | ||||
Sbjct: 630 tctcgttcccaagccgccaagactttcctggagcgcaggttccagggctacaatgactac 689

                                                                       
Query: 124 accccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggtgag 183
           ||||||||  |||||||||||||||| ||||| |||||||||||||| || || ||||||
Sbjct: 690 accccggagcagctcatcaaggacgccctctccgccataaaggagacgctgcagggtgag 749

                                                                    
Query: 184 aagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           |||||| | ||||| ||||||||  | ||||| || ||||| | |||||| ||||||
Sbjct: 750 aagctgtccagctccaactgcacggtggccatcgtaggcaggaaggaggacggcacc 806
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>gb|AY107790.1| Zea mays PCO082322 mRNA sequence
          Length = 677

 Score =  135 bits (68), Expect = 2e-28
 Identities = 203/248 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 281 gcccacctgtactacaactgccccagcgggaactacttcgagtaccaggcgttcgccatc 340

                                                                       
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcagattcgagaaattcaacgcc 120
           ||||||||||| || || |||||||| | ||| |||||||| ||| ||   | | ||| |
Sbjct: 341 ggctcccgctcccaagccgccaagacgttcctggaacgcaggttccaggggtacgacgac 400

                                                                       
Query: 121 tacaccccggacgagctcatcaaggacgctctctcagccataaaggagaccctccaaggt 180
           |||||||||||  ||||| ||| |||||| ||||| ||| | |||||||| || || || 
Sbjct: 401 tacaccccggagcagctcgtcagggacgccctctccgccgtgaaggagacgctgcagggc 460

                                                                       
Query: 181 gagaagctgacgagctctaactgcaccattgccattgtcggcagaagggaggatggcacc 240
           ||||||||| |  | || ||||||||| | ||||| |||||||| | ||| || ||||||
Sbjct: 461 gagaagctgtccggatccaactgcaccgtggccatcgtcggcaggaaggacgacggcacc 520

                   
Query: 241 gttgagcc 248
           || |||||
Sbjct: 521 gtcgagcc 528
to top
>gb|AY085017.1| Arabidopsis thaliana clone 12455 mRNA, complete sequence
          Length = 1070

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || ||||||||||||||||| || || || |||
Sbjct: 505 gcccacctttactacaactgtcccagcggaaactactttgagtaccaagcttttgctatt 564

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 565 ggatcccgttcccaagcagcaaagacctatctggaacgcag 605
to top
>gb|AF043526.1|AF043526 Arabidopsis thaliana 20S proteasome subunit PAF1 (PAF1) mRNA,
           complete cds
          Length = 1086

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || ||||||||||||||||| || || || |||
Sbjct: 488 gcccacctttactacaactgtcccagcggaaactactttgagtaccaagcttttgctatt 547

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 548 ggatcccgttcccaagcagcaaagacctatctggaacgcag 588
to top
>ref|NM_123644.3| Arabidopsis thaliana PAF1; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G42790 (PAF1) mRNA, complete cds
          Length = 1152

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 519 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 578

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 579 ggatcccgttcccaagcagcaaagacctatctggaacgcag 619
to top
>gb|AY113047.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds
          Length = 837

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 424 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 483

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 484 ggatcccgttcccaagcagcaaagacctatctggaacgcag 524
to top
>gb|AF375447.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds
          Length = 1036

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 519 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 578

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 579 ggatcccgttcccaagcagcaaagacctatctggaacgcag 619
to top
>gb|AY058128.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds
          Length = 965

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 436 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 495

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 496 ggatcccgttcccaagcagcaaagacctatctggaacgcag 536
to top
>emb|BX830176.1|CNS0A257 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB64ZD08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 799

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
           ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 158 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 217

                                                    
Query: 61  ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
           || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 218 ggatcccgttcccaagcagcaaagacctatctggaacgcag 258
to top
>dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21
          Length = 78369

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1     gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
             ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 66974 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 66915

                                                      
Query: 61    ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
             || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 66914 ggatcccgttcccaagcagcaaagacctatctggaacgcag 66874
to top
>dbj|AK059589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C09, full
           insert sequence
          Length = 306

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 76/92 (82%), Gaps = 6/92 (6%)
 Strand = Plus / Plus

                                                                       
Query: 268 aagaggatccaggagatcatcgactccatggaggctgctgacgaggcgccagcggccgat 327
           ||||||||||| || || ||||| |||||||||||||| || ||||| |||||||| || 
Sbjct: 10  aagaggatccaagaaataatcgattccatggaggctgccgaggaggcaccagcggcaga- 68

                                           
Query: 328 gctccggctgaatcaagctcgatgcaggagga 359
                |||||| || |||||||||||||||||
Sbjct: 69  -----ggctgagtcgagctcgatgcaggagga 95
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>gb|M98495.1|ATHPSM30A Arabidopsis thaliana proteasome (PSM30) gene, complete cds
          Length = 3052

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgccatt 60
            ||||| || ||||||||||| ||||| || |||||||| |||||||| || || || |||
Sbjct: 2346 gcccacctttactacaactgtcccagcggaaactacttcgagtaccaagcttttgctatt 2405

                                                     
Query: 61   ggctcccgctctcaggcagccaagacttacctcgaacgcag 101
            || ||||| || || ||||| ||||| || || ||||||||
Sbjct: 2406 ggatcccgttcccaagcagcaaagacctatctggaacgcag 2446
to top
>ref|NM_103619.3| Arabidopsis thaliana PAF2; endopeptidase/ peptidase/ threonine
           endopeptidase AT1G47250 (PAF2) mRNA, complete cds
          Length = 1637

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 7   ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
           ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 473 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 522
to top
>emb|Y13182.1|ATY13182 Arabidopsis thaliana mRNA for proteasome subunit prc2b
          Length = 954

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 7   ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
           ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 402 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 451
to top
>gb|AY141996.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, complete cds
          Length = 834

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 7   ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
           ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 430 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 479
to top
>gb|AY057649.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, complete cds
          Length = 1036

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 7   ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
           ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 473 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 522
to top
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence,
            complete sequence
          Length = 42801

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 7    ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
            ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 9827 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 9778
to top
>gb|AF043527.1|AF043527 Arabidopsis thaliana 20S proteasome subunit PAF2 (PAF2) mRNA,
           complete cds
          Length = 880

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 7   ctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 56
           ||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct: 451 ctctactacaactgccctagcggaaactactttgaatatcaagcattcgc 500
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 408     cgcagcaccagatgccccggcac 430
               |||||||||||||||||||||||
Sbjct: 2533395 cgcagcaccagatgccccggcac 2533373
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>emb|CR352769.1| Gallus gallus finished cDNA, clone ChEST436e2
          Length = 928

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 361 aggggcgatgctcccccagctgc 383
           |||||||||||||||||||||||
Sbjct: 892 aggggcgatgctcccccagctgc 914
to top
>emb|AL359820.12| Human DNA sequence from clone RP11-455C19 on chromosome 1 Contains
            the 5' end of the BCAR3 gene for breast cancer
            anti-estrogen resistance 3 and a CpG island, complete
            sequence
          Length = 78103

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 155  cagccataaaggagaccctcca 176
            ||||||||||||||||||||||
Sbjct: 8188 cagccataaaggagaccctcca 8167
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>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete
             cds, alternatively spliced; and 5S ribosomal RNA gene,
             complete sequence
          Length = 197496

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgccccagtgggaactactt 38
             ||||||||||||||||||||
Sbjct: 51224 tgccccagtgggaactactt 51243
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>ref|XM_362409.1| Magnaporthe grisea 70-15 hypothetical protein (MG07992.4) partial
           mRNA
          Length = 1317

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  aactactttgagtaccaggc 50
           ||||||||||||||||||||
Sbjct: 667 aactactttgagtaccaggc 686
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>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia
             viral (v-erb-b) oncogene homolog, avian) (EGFR) gene,
             complete cds
          Length = 192168

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgccccagtgggaactactt 38
             ||||||||||||||||||||
Sbjct: 43941 tgccccagtgggaactactt 43960
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>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
             complete sequence
          Length = 114380

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   gtgtactctttgcttctgtg 577
             ||||||||||||||||||||
Sbjct: 98390 gtgtactctttgcttctgtg 98409
to top
>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence
          Length = 157928

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    gcaggaggacaggggcgatgctcc 374
              ||||||||||||||| ||||||||
Sbjct: 102601 gcaggaggacaggggagatgctcc 102624
to top
>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence
          Length = 191821

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tgccccagtgggaactactt 38
              ||||||||||||||||||||
Sbjct: 145204 tgccccagtgggaactactt 145185
to top
>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
              complete sequence
          Length = 144177

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 608    acagattgatttttatctat 627
              ||||||||||||||||||||
Sbjct: 111241 acagattgatttttatctat 111260
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>emb|AL031667.21|HS620E11 Human DNA sequence from clone RP4-620E11 on chromosome 20q11.2-12
            Contains the 3' end of the LPIN3 gene for lipin 3, the
            C20orf130 gene, a novel pseudogene, the 3' end of the
            CHD6 gene for chromodomain helicase DNA binding protein
            6, a lymphocyte antigen 6 complex locus H (LY6H)
            pseudogene and a CpG island, complete sequence
          Length = 142520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  aaggagaccctccaaggtga 182
            ||||||||||||||||||||
Sbjct: 5989 aaggagaccctccaaggtga 5970
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>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete
             sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   gcaggaggacaggggcgatgctcc 374
             ||||||||||||||| ||||||||
Sbjct: 18363 gcaggaggacaggggagatgctcc 18386
to top
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence
          Length = 194718

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   gtgtcatgtctgtcccaccc 487
             ||||||||||||||||||||
Sbjct: 25868 gtgtcatgtctgtcccaccc 25887
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ctccaagaggatccaggaga 283
               ||||||||||||||||||||
Sbjct: 1403735 ctccaagaggatccaggaga 1403716
to top
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 286    atcgactccatggaggctgctgacgagg 313
              ||||| |||||||| |||||||||||||
Sbjct: 870832 atcgaatccatggaagctgctgacgagg 870859
to top
>dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730058C04 product:alpha
           thalassemia/mental retardation syndrome X-linked homolog
           (human), full insert sequence
          Length = 5433

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 559 tgtactctttgcttctgtgc 578
           ||||||||||||||||||||
Sbjct: 513 tgtactctttgcttctgtgc 532
to top
>ref|NM_001037361.1| Rattus norvegicus similar to IQ motif containing D (LOC498184),
           mRNA
          Length = 1921

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 267 caagaggatccaggagatcatcga 290
           |||||||| |||||||||||||||
Sbjct: 958 caagaggaaccaggagatcatcga 981
to top
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence
          Length = 253824

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     caggcagccaagacttacct 92
              ||||||||||||||||||||
Sbjct: 210122 caggcagccaagacttacct 210103
to top
>gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, complete sequence
          Length = 123495

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   ttagaaaggttgccatcatt 555
             ||||||||||||||||||||
Sbjct: 29704 ttagaaaggttgccatcatt 29723
to top
>gb|AY148093.1| Magnaporthe grisea trehalose-6-phosphate synthase subunit 1 (TPS1)
            gene, complete cds
          Length = 7671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  ggccgatgctccggctgaat 340
            ||||||||||||||||||||
Sbjct: 3425 ggccgatgctccggctgaat 3406
to top
>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgccccagtgggaactactt 38
             ||||||||||||||||||||
Sbjct: 51224 tgccccagtgggaactactt 51243
to top
>ref|XM_573292.1| PREDICTED: Rattus norvegicus hematopoietic cell specific Lyn
           substrate 1 (predicted) (Hcls1_predicted), mRNA
          Length = 1978

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 ggacgagcccgcagcaccag 418
           ||||||||||||||||||||
Sbjct: 914 ggacgagcccgcagcaccag 933
to top
>gb|BC079081.1| Rattus norvegicus hematopoietic cell specific Lyn substrate 1, mRNA
           (cDNA clone MGC:94041 IMAGE:7122756), complete cds
          Length = 1976

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 ggacgagcccgcagcaccag 418
           ||||||||||||||||||||
Sbjct: 886 ggacgagcccgcagcaccag 905
to top
>ref|NM_001011898.1| Rattus norvegicus hematopoietic cell specific Lyn substrate 1
           (Hcls1), mRNA
          Length = 1976

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 ggacgagcccgcagcaccag 418
           ||||||||||||||||||||
Sbjct: 886 ggacgagcccgcagcaccag 905
to top
>gb|AC158167.5| Mus musculus BAC clone RP23-432K4 from chromosome 16, complete
            sequence
          Length = 43409

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   tctcaggcagccaagactta 89
            ||||||||||||||||||||
Sbjct: 8370 tctcaggcagccaagactta 8389
to top
>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence
          Length = 237935

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    gcaggaggacaggggcgatgctcc 374
              ||||||||||||||| ||||||||
Sbjct: 196750 gcaggaggacaggggagatgctcc 196773
to top
>gb|BC083607.1| Rattus norvegicus similar to IQ motif containing D, mRNA (cDNA
           clone MGC:94359 IMAGE:7133364), complete cds
          Length = 1921

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 267 caagaggatccaggagatcatcga 290
           |||||||| |||||||||||||||
Sbjct: 958 caagaggaaccaggagatcatcga 981
to top
>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete
             sequence
          Length = 181805

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 559   tgtactctttgcttctgtgc 578
             ||||||||||||||||||||
Sbjct: 41160 tgtactctttgcttctgtgc 41141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,023,706
Number of Sequences: 3902068
Number of extensions: 5023706
Number of successful extensions: 88174
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88011
Number of HSP's gapped (non-prelim): 153
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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