| Clone Name | rbaal9p08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in ch... | 30 | 3.8 | 2 | SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calciu... | 29 | 8.4 | 3 | MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc tra... | 29 | 8.4 |
|---|
>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X| Length = 462 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +3 Query: 396 HAHRHHPGRDSXXXXXXXXXXXXXEEHGQSHRDEAHHHG-EADEQV 530 HAH HH S + HG SH D H HG E+ +QV Sbjct: 94 HAHDHHG--HSHDEEEDHHHGHAHDHHGHSHEDHGHSHGAESAKQV 137
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 29.3 bits (64), Expect = 8.4 Identities = 13/45 (28%), Positives = 17/45 (37%) Frame = +3 Query: 390 RQHAHRHHPGRDSXXXXXXXXXXXXXEEHGQSHRDEAHHHGEADE 524 R AHRH R+ +H Q+HR H E +E Sbjct: 392 RHQAHRHRGHREEEDEDDDDEGDSTESDHHQAHRHRGHREEEDEE 436
>MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc transporter| ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1 short form] Length = 398 Score = 29.3 bits (64), Expect = 8.4 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 3/48 (6%) Frame = +3 Query: 396 HAHRHHPGRDSXXXXXXXXXXXXXEEHGQSH---RDEAHHHGEADEQV 530 H H HH S EHG SH D+ H HG+ EQ+ Sbjct: 194 HGHDHH--NHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQL 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,012,601 Number of Sequences: 219361 Number of extensions: 850577 Number of successful extensions: 2482 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2342 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2464 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)