ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16h17 |
|---|---|
| Clone Library Name | barley_pub |
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein| Length = 507 Score = 125 bits (313), Expect = 1e-28 Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 1/202 (0%) Frame = +1 Query: 1 VASSLDTLCGQAFGAKRPHLLGIYKQRAIXXXXXXXXXXXXXWAFTGQILLLLGQDPEIA 180 +AS++ T+CGQA+GA++ +GI QRA+ + ++G IL +GQ IA Sbjct: 109 MASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIA 168 Query: 181 MGAGSYIRWMIPSLFAYALLQCHVRFLQTQNIVLP-AMASSGVTALGHVLVCWLLVYXXX 357 + R MIP ++A+AL RFLQ QNIV P A S GV L H L+ WL+ Sbjct: 169 HEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLL-HTLLTWLVTNVLD 227 Query: 358 XXXXXXXXXXXXSYLTNVSILALYIRVSPSCKSTWTGLSKEAFRDIVSFMKLAVPSALMV 537 S+ V++ +YI +SP+CK TWTG S AFR I + KL V SA+M+ Sbjct: 228 FGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVML 287 Query: 538 CLEWWSFEXXXXXXXXXANPKL 603 CLE W + +NP + Sbjct: 288 CLEIWYNQGLVIISGLLSNPTI 309
>YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I| Length = 455 Score = 77.4 bits (189), Expect = 3e-14 Identities = 50/185 (27%), Positives = 82/185 (44%) Frame = +1 Query: 7 SSLDTLCGQAFGAKRPHLLGIYKQRAIXXXXXXXXXXXXXWAFTGQILLLLGQDPEIAMG 186 ++ DTL +GA + LGI Q W ++ IL+ L Q PE+A Sbjct: 67 TAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEA 126 Query: 187 AGSYIRWMIPSLFAYALLQCHVRFLQTQNIVLPAMASSGVTALGHVLVCWLLVYXXXXXX 366 + ++R++IP Y + +FLQTQ I VT+ +V + +LLV+ Sbjct: 127 SQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGL 186 Query: 367 XXXXXXXXXSYLTNVSILALYIRVSPSCKSTWTGLSKEAFRDIVSFMKLAVPSALMVCLE 546 SY + +L Y + ++ W G +K + F+KL++ +MV E Sbjct: 187 KGAPLATGLSYWLSFILLTQYAKYVKGAEA-WNGWNKRCLENFGPFVKLSLLGIVMVGTE 245 Query: 547 WWSFE 561 WW+FE Sbjct: 246 WWAFE 250
>YHJ2_YEAST (P38767) Hypothetical 64.2 kDa protein in SLT2-PUT2 intergenic| region Length = 581 Score = 62.8 bits (151), Expect = 8e-10 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 8/195 (4%) Frame = +1 Query: 1 VASSLDTLCGQAFGAKRPHLLGIYKQRAIXXXXXXXXXXXXXW-AFTGQILLLLGQDPEI 177 + + LDTLC QA+GAK HL+G+ QR W ++ +IL L+ + E+ Sbjct: 222 LCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAFLPMMYVWFVWSEKILALMIPEREL 281 Query: 178 AMGAGSYIRWMIPSLFAYALLQCHVRFLQTQNIVLPAMASSGVTALGHVLVCWLLVY--- 348 A +Y+R + + L +C RFLQ Q I + V A + L+ +LLV+ Sbjct: 282 CALAANYLRVTAFGVPGFILFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWNDK 341 Query: 349 XXXXXXXXXXXXXXXSYLTNVSIL--ALYIRVSPSCKSTWTGL--SKEAFRDIVSFMKLA 516 +L + +L A+ + W G+ ++AF++ + LA Sbjct: 342 IGIGYLGAPLSVVINYWLMTLGLLIYAMTTKHKERPLKCWNGIIPKEQAFKNWRKMINLA 401 Query: 517 VPSALMVCLEWWSFE 561 +P +MV E+ FE Sbjct: 402 IPGVVMVEAEFLGFE 416
>YD338_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7 intergenic| region Length = 695 Score = 57.0 bits (136), Expect = 4e-08 Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 3/190 (1%) Frame = +1 Query: 1 VASSLDTLCGQAFGAKRPHLLGIYKQRAIXXXXXXXXXXXXXWAFTGQILLLLGQDPEIA 180 +A+SLDTLC QA+G+ R + +G++ QR I W ++ +L + + E+ Sbjct: 285 IATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELI 344 Query: 181 MGAGSYIRWMIPSLFAYALLQCHVRFLQTQNIVLPAMASSGVTALGHVLVCWLLV---YX 351 ++R +I AY + RFLQ Q I + + A +VLV + LV Y Sbjct: 345 NLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYI 404 Query: 352 XXXXXXXXXXXXXXSYLTNVSILALYIRVSPSCKSTWTGLSKEAFRDIVSFMKLAVPSAL 531 +L + L L+ + + W G S++AF LA + Sbjct: 405 GVGFIGAAIAVVLNFWL--MFFLLLFYALYIDGRKCWGGFSRKAFTHWNDLGHLAFSGII 462 Query: 532 MVCLEWWSFE 561 M+ E S+E Sbjct: 463 MLEAEELSYE 472
>NORM_BORPA (Q7WAK9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 37.4 bits (85), Expect = 0.035 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Frame = +1 Query: 145 ILLLLGQDPEIAMGAGSYIR---WMIPSLFAYALLQCHVRFLQ-TQNIVLPAMASSGVTA 312 ILL + Q PE+A AG+Y+R W +P + +L+ V LQ ++ L A+A+ + Sbjct: 120 ILLAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVTALQRPRSAFLIALAAIVLNV 179 Query: 313 LGHVLVCWLLVY 348 G+ W+LV+ Sbjct: 180 FGN----WVLVF 187
>NORM_BORBR (Q7WJR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 37.4 bits (85), Expect = 0.035 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Frame = +1 Query: 145 ILLLLGQDPEIAMGAGSYIR---WMIPSLFAYALLQCHVRFLQ-TQNIVLPAMASSGVTA 312 ILL + Q PE+A AG+Y+R W +P + +L+ V LQ ++ L A+A+ + Sbjct: 120 ILLAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVAALQRPRSAFLIALAAIVLNV 179 Query: 313 LGHVLVCWLLVY 348 G+ W+LV+ Sbjct: 180 FGN----WVLVF 187
>DNAA_STRCH (Q9ZH75) Chromosomal replication initiator protein dnaA| Length = 624 Score = 33.9 bits (76), Expect = 0.39 Identities = 24/93 (25%), Positives = 40/93 (43%) Frame = -1 Query: 360 QPNLVDQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPH 181 Q +L QQP H +R RE + R +R +E+ R+ P+ P+ Sbjct: 164 QEDLSWQQPRHGGYQDREQPSGEPYRESESYR---------ERENEQYREQAPEQWRQPY 214 Query: 180 GDLRVLAQEQEDLPGERPEHRNHDAHQSEHKDR 82 G R Q Q D PEH+ ++ + + +D+ Sbjct: 215 GTGRP-QQPQHDYRSGPPEHQGYEQQRPDRQDQ 246
>INVO_GALCR (P24710) Involucrin| Length = 384 Score = 33.5 bits (75), Expect = 0.51 Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 4/139 (2%) Frame = -1 Query: 462 PGALAGWRDPDVESQDRYIGQVRDAVGQGSALVAQPNLVDQQPAHENVAERRDARARHCR 283 PG +DP++ + Q +++ QG L+ Q + Q ++ + ++++ + Sbjct: 149 PGKQQEPQDPELHLGKQ---QQQESQEQGLCLIKQREPQESQEQRLHLGKEQESQEQRLH 205 Query: 282 EDDVLRLEEPDVAL-QQRVSEERRDHPPDVAPCPHGDLRVLAQ---EQEDLPGERPEHRN 115 + +E + L +++ S+E+R H + P L++L Q EQE G++ + + Sbjct: 206 LGEEQASQEQRLHLGEEQASQEQRLHLGEEQASPEQRLQLLPQGPQEQELHLGKQQQQQE 265 Query: 114 HDAHQSEHKDRPLLVDAEQ 58 HQ +H++ D Q Sbjct: 266 SQQHQEQHEEHQKAEDLGQ 284
>RIMS2_HUMAN (Q9UQ26) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1411 Score = 33.1 bits (74), Expect = 0.66 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Frame = -1 Query: 438 DPDVESQDRYIGQVRDAVGQGSALVAQPNL----VDQQPAHENVAERRD-ARARHCREDD 274 D DVES+D Y Q R+ Q S + PNL V QP E + + +RARH R Sbjct: 342 DEDVESRDEYERQRREEEYQ-SRYRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHS 400 Query: 273 VLRLEEPDVALQQRVSEERRDHP 205 + L D+ R+S R D P Sbjct: 401 DVSLANADLE-DSRISMLRMDRP 422
>ENP2_MOUSE (O55026) Ectonucleoside triphosphate diphosphohydrolase 2 (EC| 3.6.1.-) (NTPDase2) (Ecto-ATPase) (CD39 antigen-like 1) Length = 495 Score = 33.1 bits (74), Expect = 0.66 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +3 Query: 348 QDWAGQQGRCPGQRHLVPDQCIDLGSLHQGLSILQEHLDRALKGGV 485 Q WA Q R PGQ+ +PD C +HQ LS +R+ +G V Sbjct: 379 QTWAELQARVPGQQTRLPDYCAVAMFIHQLLSRGYRFDERSFRGVV 424
>NORM_RHIME (Q92PZ0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 33.1 bits (74), Expect = 0.66 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Frame = +1 Query: 145 ILLLLGQDPEIAMGAGSYI---RWMIPSLFAYALLQCHVRFLQTQNIVLPAMASSGVTAL 315 ILL GQ PE+A AG Y+ +W I + +L+ + L+ ++L VT + Sbjct: 125 ILLFAGQKPEVAALAGEYLHIAQWAIFPSLIFMVLRAFLSGLERAGVILYVTL---VTLV 181 Query: 316 GHVLVCWLLVY 348 + +C++L++ Sbjct: 182 LNAALCYVLIF 192
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 32.7 bits (73), Expect = 0.87 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 1/124 (0%) Frame = -1 Query: 402 QVRDAVGQGSALVAQPN-LVDQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVS 226 Q + A Q + PN +++ + + E++ +A +E L+ P + Q ++ Sbjct: 503 QFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIE 562 Query: 225 EERRDHPPDVAPCPHGDLRVLAQEQEDLPGERPEHRNHDAHQSEHKDRPLLVDAEQMGPF 46 + + P P +L + PG+ P + Q H + + ++ QMGP Sbjct: 563 RLAQKQVEQIQPPPSSGTPLLGPQP--FPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPP 620 Query: 45 CPEG 34 P+G Sbjct: 621 GPQG 624
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 32.7 bits (73), Expect = 0.87 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = +1 Query: 145 ILLLLGQDPEIAMGAGSYIRWM---IPSLFAYALLQCHVRFLQ 264 ILL +GQ+P +A AG Y+RW+ + + Y +L+ + L+ Sbjct: 125 ILLAMGQEPALAHQAGIYLRWLEWAVLPFYGYIVLRSFISALE 167
>NORM_VIBF1 (Q5E4Y6) Multidrug resistance protein norM (Na(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 460 Score = 32.3 bits (72), Expect = 1.1 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 6/142 (4%) Frame = +1 Query: 139 GQILLLLGQDPEIAMGAGSYIRWMIPSLFAYALLQCHVRFLQTQNIVLPAMASSGVTALG 318 G I+ + +PE+ Y+ ++ + A+ L Q F + ++ PAM + Sbjct: 110 GFIIAAMDVEPELYEKTQGYLHAVLWAAPAFLLFQTLRSFCEGLSLTTPAMIIGFIGLAA 169 Query: 319 HVLVCWLLVYXXXXXXXXX----XXXXXXSYLTNVSILALYIRVSPSCK--STWTGLSKE 480 +V + W+ VY Y + LY ++P + + + +K Sbjct: 170 NVPLNWMFVYGELGAPALGGVGCGVATAIVYWLMFLTMTLYTFIAPKLRRVNLYENWNKP 229 Query: 481 AFRDIVSFMKLAVPSALMVCLE 546 ++I KL +P AL + E Sbjct: 230 QRKEIYRLFKLGLPVALSIFFE 251
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 31.6 bits (70), Expect = 1.9 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Frame = -1 Query: 363 AQPNLVDQQPAHENVAERRDARARHCRE-DDVLRLEEPDVALQQ---RVSEERRDHPPDV 196 A P+LV+QQ E + ++ + + R E ++ LR + V + VS+ PP Sbjct: 1468 ATPSLVEQQKMLEELNKQIEEQKRQLEEQEEALRQQRAAVGVSMAHFSVSDALMS-PPPK 1526 Query: 195 APCPHGDLRVLAQEQEDLPGERPEHRNHDAHQSEHKDRPLLVDAEQMGPFCPEGLPTQRV 16 + P +L Q+ D P P H+ + R L + + EG P R+ Sbjct: 1527 SSLPKAELFQQEQQSADKPASLPPASQASNHRDPRQARRLATETGE-----GEGEPLSRL 1581 Query: 15 QA 10 A Sbjct: 1582 SA 1583
>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor-binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protei Length = 2004 Score = 31.6 bits (70), Expect = 1.9 Identities = 30/152 (19%), Positives = 61/152 (40%) Frame = -1 Query: 549 PL*ANHERGWHGELHEADDVAERLL*EPCPGALAGWRDPDVESQDRYIGQVRDAVGQGSA 370 P+ + + G ++ E+++ E P P + E+++ G+ DA Sbjct: 1191 PIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDA------ 1244 Query: 369 LVAQPNLVDQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAP 190 A + PA + + + + E++ E+P V+ +QR SEE + + P Sbjct: 1245 --ASSEVPAASPADSSNSPETETKEPEVEEEE----EKPRVSEEQRQSEEEQQELEEPEP 1298 Query: 189 CPHGDLRVLAQEQEDLPGERPEHRNHDAHQSE 94 +E+ED E ++ +HDA + Sbjct: 1299 ----------EEEEDAAAETAQNDDHDADDED 1320
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/82 (25%), Positives = 36/82 (43%) Frame = -1 Query: 345 DQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPHGDLRV 166 +Q E RR R R CRE++ L+ EE + ++R R+ +L Sbjct: 1108 EQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQ------------ELER 1155 Query: 165 LAQEQEDLPGERPEHRNHDAHQ 100 +E+E+L ++ + R D Q Sbjct: 1156 QYREEEELQRQKRKQRYRDEDQ 1177 Score = 31.6 bits (70), Expect = 1.9 Identities = 25/96 (26%), Positives = 38/96 (39%) Frame = -1 Query: 345 DQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPHGDLRV 166 +Q E R R R RE++ L+ EE +Q + EER + Sbjct: 1048 EQLLREEREKRRLQERERQYREEEELQQEE-----EQLLGEERETRRRQELERQYRKEEE 1102 Query: 165 LAQEQEDLPGERPEHRNHDAHQSEHKDRPLLVDAEQ 58 L QE+E L E PE R + + ++ L E+ Sbjct: 1103 LQQEEEQLLREEPEKRRRQERERQCREEEELQQEEE 1138
>YPTO_PSEST (Q8KLV8) UPF0042 protein in ptsN-ptsO intergenic region| Length = 285 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = -1 Query: 306 DARARHCREDDVLRLEEPDVALQQRVSEERRDHP 205 + RARH + DVL L+ D L +R SE RR HP Sbjct: 77 EVRARHI-QCDVLYLDADDETLLKRFSETRRRHP 109
>YPTO_PSEPU (Q9Z427) UPF0042 protein in ptsO 5'region| Length = 284 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = -1 Query: 306 DARARHCREDDVLRLEEPDVALQQRVSEERRDHP 205 +ARARH + DVL L+ + L +R SE RR HP Sbjct: 77 EARARHI-QCDVLYLDADEEVLLKRFSETRRRHP 109
>Y949_PSEPK (Q88PA1) UPF0042 protein PP0949| Length = 284 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = -1 Query: 306 DARARHCREDDVLRLEEPDVALQQRVSEERRDHP 205 +ARARH + DVL L+ + L +R SE RR HP Sbjct: 77 EARARHI-QCDVLYLDADEEVLLKRFSETRRRHP 109
>RFBC_MYXXA (Q50864) O-antigen biosynthesis protein rfbC| Length = 1275 Score = 30.4 bits (67), Expect = 4.3 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 399 PDQCIDLGSLHQGLSILQEHLDRALKGGVPRHRQLHEARR 518 P+QC + +L L + EHL RAL G L EA R Sbjct: 40 PEQCDERSALEGALRLATEHLHRALPDGGQGMSSLQEAAR 79
>RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1555 Score = 30.0 bits (66), Expect = 5.6 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Frame = -1 Query: 438 DPDVESQDRYIGQVRDAVGQGSALVAQPNL----VDQQPAHENVAERRD-ARARHCREDD 274 D DVES+D Y Q R+ Q + + PNL V QP E + + +RARH R Sbjct: 311 DEDVESRDEYERQRREEEYQ-ARYRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHS 369 Query: 273 VLRLEEPDVALQQRVSEERRDHP 205 + L ++ R+S R D P Sbjct: 370 DVSLANAELE-DSRISLLRMDRP 391
>MLR1_SCHPO (Q9UUG5) Myosin regulatory light chain 1| Length = 184 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/68 (25%), Positives = 35/68 (51%) Frame = -2 Query: 605 SSLGFARSPERSTSSSNDHHSKQTMSADGTASFMKLTMSRNASFESPVQVLLQDGETLM* 426 +SLG R+P S ++S+ + Q + +F +LT S+ + +L +DG+ + Sbjct: 7 NSLGAKRAPFSSNTTSSQRVAAQAAKRASSGAFAQLTSSQIQELKEAFALLDKDGDGNIG 66 Query: 425 RAKIDTLV 402 R + T++ Sbjct: 67 REDVKTML 74
>GATB_CHRVO (Q7NPY8) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 475 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 201 DVAPCPHGDLRVLAQEQEDLPGERPEHRNHDAHQSEHKD 85 D+ HG L++L +QE + G H DA +S H+D Sbjct: 96 DLPIVEHGKLKILVGDQEKVIGVTRAHMEEDAGKSLHED 134
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 2/83 (2%) Frame = -1 Query: 309 RDARARHCREDDVLRLEEPDVALQQRVSEERRDHP--PDVAPCPHGDLRVLAQEQEDLPG 136 RD R R +D E+ + + R R P PD + GD R E++ Sbjct: 189 RDRSHRRSRHED----EDAHRSHRHRSHRHRSRSPLSPDRSDRKRGDDRDYRDERDRRDD 244 Query: 135 ERPEHRNHDAHQSEHKDRPLLVD 67 R EHR HD +R D Sbjct: 245 RRDEHRGHDRRDDRRSERDRRAD 267
>UVRC_ACIAD (Q6FF64) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 599 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +3 Query: 366 QGRCPGQR--HLVPDQCIDLGSLHQGLSILQEHLDRALKGGVPRHRQLHEARRA 521 +GR PG H I L H+ L ++Q+ D A + + +HR + RRA Sbjct: 490 EGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKRRA 543
>RIMS2_MOUSE (Q9EQZ7) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) (Rab3-interacting protein 2) Length = 1530 Score = 30.0 bits (66), Expect = 5.6 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Frame = -1 Query: 438 DPDVESQDRYIGQVRDAVGQGSALVAQPNL----VDQQPAHENVAERRD-ARARHCREDD 274 D DVES+D Y Q R+ Q + + PNL V QP E + + +RARH R Sbjct: 351 DEDVESRDEYERQRREEEYQ-ARYRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHS 409 Query: 273 VLRLEEPDVALQQRVSEERRDHP 205 + L ++ R+S R D P Sbjct: 410 DVSLANAELE-DSRISLLRMDRP 431
>ARAB_YERPS (Q66AF7) Ribulokinase (EC 2.7.1.16)| Length = 563 Score = 29.6 bits (65), Expect = 7.3 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = -1 Query: 294 RHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPHGDLRVLAQEQEDLPGERPEHR- 118 RH D + +E+ + +R+SEE+R H + G EQ + RP+ Sbjct: 56 RHHPLDYIEAMEQAIRQMVKRLSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFAD 115 Query: 117 NHDAHQSEHKDRPLLVDAEQMGPFCPEG 34 N +A KD + +AE++ C G Sbjct: 116 NPNAMFVLWKDHTAIEEAEEINRLCRSG 143
>ARAB_YERPE (P58543) Ribulokinase (EC 2.7.1.16)| Length = 563 Score = 29.6 bits (65), Expect = 7.3 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = -1 Query: 294 RHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPHGDLRVLAQEQEDLPGERPEHR- 118 RH D + +E+ + +R+SEE+R H + G EQ + RP+ Sbjct: 56 RHHPLDYIEAMEQAIRQMVKRLSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFAD 115 Query: 117 NHDAHQSEHKDRPLLVDAEQMGPFCPEG 34 N +A KD + +AE++ C G Sbjct: 116 NPNAMFVLWKDHTAIEEAEEINRLCRSG 143
>TIG_THEMA (Q9WZF8) Trigger factor (TF)| Length = 425 Score = 29.6 bits (65), Expect = 7.3 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = -1 Query: 321 VAERRDARARHCREDDVLRLEEPDVA---LQQRVSEERRDHP---PDVAPCPHGDLRVLA 160 V E + R + +V +++E V +++R+ + R H P P GDL + Sbjct: 105 VHEEPEVRIGDISKIEVEKVDEEKVLEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVN 164 Query: 159 QEQEDLPGERPEHRNHDAHQSEHKDRPLLVD 67 E + G++ R ++ SE +DRP + D Sbjct: 165 MEVYNEEGKKLTSREYEYVISEDEDRPFVKD 195
>MCM5_CAEEL (Q21902) DNA replication licensing factor mcm-5| Length = 759 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +3 Query: 360 GQQGRCPGQRHLV-PD--QCIDLGSLHQGLSILQEHLDRALKGGVPRHRQLHEAR 515 GQ RCP +++ PD +C+D +L LQE+ + G +PRH QL R Sbjct: 203 GQMQRCPIDPYIMLPDKCECVDYQTLK-----LQENPEDVPHGEMPRHLQLFTER 252
>Y2306_MYCTU (Q50659) Hypothetical protein Rv2306c/MT2363 precursor| Length = 208 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Frame = -1 Query: 231 VSEERRDHPPDVAPCPHGDLRVLAQEQE-----------DLPGERPEHRNHDAHQSEHKD 85 V R + P D PH D RV + ++ + P RP+ R +D + + Sbjct: 28 VPTPRGERPDDGGHAPHRDRRVNQRRRQVGDRRAQRGVDEHPWRRPDERPNDHLPQRNSE 87 Query: 84 RPLLVDAEQMGPFCPEGLPTQRVQAA 7 RP V +++ E L R Q+A Sbjct: 88 RPEGVRGQRIRDAGDEALTDHRPQSA 113
>NAPA_SHEON (Q8EIJ1) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 826 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Frame = -1 Query: 405 GQVRDAVGQGSALVAQPNLVDQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVS 226 G+V + GS P L P + DA+AR + D + + P ++ RV Sbjct: 717 GRVLEHWHTGSMTARVPELYRAYPDAQIFMHPEDAKARGLQRGDEVLVASPRGEIKTRVE 776 Query: 225 EERRDHPP-DVAPCPHGDLRVLAQE 154 + R+ PP V P D R L + Sbjct: 777 TKGRNKPPRGVVFMPFFDARQLVNK 801
>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister| chromatids) Length = 1741 Score = 29.3 bits (64), Expect = 9.6 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = -1 Query: 213 DHPPDVAPCPHGDLRVLAQEQEDLPGERPEHRNHDAHQSEHKDRP 79 +HPP V G R+++ + E+ P P H+N S ++ P Sbjct: 338 EHPPIVLRISKGTSRLVSTDSEEPPSSSPAHQNQLNQLSVTEEEP 382
>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) Length = 1706 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 345 DQQPAHENVAERRDARARHCREDDVLRLEEPDVALQ--QRVSEERRDHPPDVAPCPH 181 +++ + V E +E ++ E+P+ L+ Q +S E R+ PDV P PH Sbjct: 281 EEELGEDGVEEADMPNESSAKEPEIRCEEKPEDLLEEPQSMSNEAREDSPDVTPPPH 337
>INVO_SAGOE (P24712) Involucrin| Length = 493 Score = 29.3 bits (64), Expect = 9.6 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Frame = -1 Query: 345 DQQPAHENVAERRDARARHCREDDVLRLEEPDVALQQRVSE--ERRDHPPDVAPCPHGDL 172 +QQ E V + E+ L ++ D L +R + +++ + G L Sbjct: 103 EQQLKQEKVQREKQQLQGQLEEEKKLLDQQLDQELAKRDEQLGTKKEQLLEFPEQQEGQL 162 Query: 171 RVLAQEQEDLPGERPEHRNHDAHQSEHKDRPLLVDAEQMG 52 + L QE+ L E PE + EH+++PL + +Q G Sbjct: 163 KHLEQEEGHL--ELPEQQEGQLKNLEHQEKPLELPEQQEG 200
>TRHY_SHEEP (P22793) Trichohyalin| Length = 1549 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/85 (23%), Positives = 39/85 (45%) Frame = -1 Query: 309 RDARARHCREDDVLRLEEPDVALQQRVSEERRDHPPDVAPCPHGDLRVLAQEQEDLPGER 130 + A+ RE++ LRL+E + ++R E R + + L +E+E L E Sbjct: 383 KPAQREQVREEEQLRLKEEKLQREKRRQERERQYREVEL---QREEERLQREEEQLQREE 439 Query: 129 PEHRNHDAHQSEHKDRPLLVDAEQM 55 E R + ++ ++ L + EQ+ Sbjct: 440 REKRRRQEREKQYLEKVELWEEEQL 464 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,360,681 Number of Sequences: 219361 Number of extensions: 1683809 Number of successful extensions: 6211 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6190 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
