ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16h17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 186 bits (94), Expect = 6e-44 Identities = 226/270 (83%) Strand = Plus / Minus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggcaaaacggccccatctgc 61 ||||||||||| ||||||||||||| || || || ||||| || || | || ||| ||| Sbjct: 119787 tggcgagcagcctggacacgctgtgcggccaggcgttcggcgcgaagcagcaccacatgc 119728 Query: 62 tcggcatctacaagcagagggcgatccttgtgctcactctggtgagcgtcgtggttgcgg 121 ||||| | ||||||||| ||||||| || |||||| | |||||||||||| | | |||| Sbjct: 119727 tcggcgtgtacaagcagcgggcgatgctggtgctcgcgctggtgagcgtcccgatcgcgg 119668 Query: 122 tgctctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgcca 181 | ||||||| |||||||| |||||||||| || | |||||||||||||||||||| Sbjct: 119667 cggtctgggccttcaccggcgagatcctcctcgtcgtcggccaggacccggagatcgcgg 119608 Query: 182 tgggggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgc 241 ||| || ||||||||||||||||||||||||||| |||| |||| |||| || ||||| Sbjct: 119607 cgggcgccgggagctacatccggtggatgatcccgacgctgttcgtctacgggccgctgc 119548 Query: 242 agtgccacgtccggttcctccagacgcaga 271 ||||||||||||||||||| |||||||||| Sbjct: 119547 agtgccacgtccggttcctgcagacgcaga 119518 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 544 gagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatcctaagct 602 |||||||||||||||||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 119070 gagtggtggtcgtttgagctcctggtgctgctctccggtcttctggcaaatcccaagct 119012 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 478 gaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||||||| || || ||||| ||| |||||||||||| || ||||||||||| Sbjct: 119311 gaggcgttccgcgacgtcctcggcttcttgaggctcgccgtgccttctgcgctcatggt 119253
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 186 bits (94), Expect = 6e-44 Identities = 226/270 (83%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggcaaaacggccccatctgc 61 ||||||||||| ||||||||||||| || || || ||||| || || | || ||| ||| Sbjct: 5946526 tggcgagcagcctggacacgctgtgcggccaggcgttcggcgcgaagcagcaccacatgc 5946585 Query: 62 tcggcatctacaagcagagggcgatccttgtgctcactctggtgagcgtcgtggttgcgg 121 ||||| | ||||||||| ||||||| || |||||| | |||||||||||| | | |||| Sbjct: 5946586 tcggcgtgtacaagcagcgggcgatgctggtgctcgcgctggtgagcgtcccgatcgcgg 5946645 Query: 122 tgctctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgcca 181 | ||||||| |||||||| |||||||||| || | |||||||||||||||||||| Sbjct: 5946646 cggtctgggccttcaccggcgagatcctcctcgtcgtcggccaggacccggagatcgcgg 5946705 Query: 182 tgggggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgc 241 ||| || ||||||||||||||||||||||||||| |||| |||| |||| || ||||| Sbjct: 5946706 cgggcgccgggagctacatccggtggatgatcccgacgctgttcgtctacgggccgctgc 5946765 Query: 242 agtgccacgtccggttcctccagacgcaga 271 ||||||||||||||||||| |||||||||| Sbjct: 5946766 agtgccacgtccggttcctgcagacgcaga 5946795 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 ||||||||| ||||||||||| ||| |||| || ||| ||||||||| |||||||||| Sbjct: 9788500 cggtggatgctcccgtcgctcgccgcctacgtgccgctccagtgccacatccggttcctg 9788441 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggccac 321 |||||||||| | |||| ||||| | | ||||||||| | || ||| |||||| |||| Sbjct: 9788440 cagacgcagaccgtcgtgctccccgtcacggcgagctccgccgccaccgcgctcctccac 9788381 Query: 322 gttctcgtgtgctggttgct 341 |||||||||||| |||| Sbjct: 9788380 ccgctcgtgtgctggctgct 9788361 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 544 gagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatcctaagct 602 |||||||||||||||||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 5947243 gagtggtggtcgtttgagctcctggtgctgctctccggtcttctggcaaatcccaagct 5947301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 478 gaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||||||| || || ||||| ||| |||||||||||| || ||||||||||| Sbjct: 5947002 gaggcgttccgcgacgtcctcggcttcttgaggctcgccgtgccttctgcgctcatggt 5947060 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 9778556 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 9778615 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 9778616 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 9778666 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 9736726 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 9736667 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || ||| ||||||| |||||||||| Sbjct: 9736666 cggtcgcccacgttgccgtgtgctgg 9736641 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 9718473 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 9718414 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || |||||||||| |||||||||| Sbjct: 9718413 cggtcggccacgtcgccgtgtgctgg 9718388
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 186 bits (94), Expect = 6e-44 Identities = 226/270 (83%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggcaaaacggccccatctgc 61 ||||||||||| ||||||||||||| || || || ||||| || || | || ||| ||| Sbjct: 5947712 tggcgagcagcctggacacgctgtgcggccaggcgttcggcgcgaagcagcaccacatgc 5947771 Query: 62 tcggcatctacaagcagagggcgatccttgtgctcactctggtgagcgtcgtggttgcgg 121 ||||| | ||||||||| ||||||| || |||||| | |||||||||||| | | |||| Sbjct: 5947772 tcggcgtgtacaagcagcgggcgatgctggtgctcgcgctggtgagcgtcccgatcgcgg 5947831 Query: 122 tgctctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgcca 181 | ||||||| |||||||| |||||||||| || | |||||||||||||||||||| Sbjct: 5947832 cggtctgggccttcaccggcgagatcctcctcgtcgtcggccaggacccggagatcgcgg 5947891 Query: 182 tgggggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgc 241 ||| || ||||||||||||||||||||||||||| |||| |||| |||| || ||||| Sbjct: 5947892 cgggcgccgggagctacatccggtggatgatcccgacgctgttcgtctacgggccgctgc 5947951 Query: 242 agtgccacgtccggttcctccagacgcaga 271 ||||||||||||||||||| |||||||||| Sbjct: 5947952 agtgccacgtccggttcctgcagacgcaga 5947981 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 ||||||||| ||||||||||| ||| |||| || ||| ||||||||| |||||||||| Sbjct: 9794539 cggtggatgctcccgtcgctcgccgcctacgtgccgctccagtgccacatccggttcctg 9794480 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggccac 321 |||||||||| | |||| ||||| | | ||||||||| | || ||| |||||| |||| Sbjct: 9794479 cagacgcagaccgtcgtgctccccgtcacggcgagctccgccgccaccgcgctcctccac 9794420 Query: 322 gttctcgtgtgctggttgct 341 |||||||||||| |||| Sbjct: 9794419 ccgctcgtgtgctggctgct 9794400 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 544 gagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatcctaagct 602 |||||||||||||||||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 5948429 gagtggtggtcgtttgagctcctggtgctgctctccggtcttctggcaaatcccaagct 5948487 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 478 gaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||||||| || || ||||| ||| |||||||||||| || ||||||||||| Sbjct: 5948188 gaggcgttccgcgacgtcctcggcttcttgaggctcgccgtgccttctgcgctcatggt 5948246 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 9784595 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 9784654 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 9784655 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 9784705 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 9742765 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 9742706 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || ||| ||||||| |||||||||| Sbjct: 9742705 cggtcgcccacgttgccgtgtgctgg 9742680 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 9724512 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 9724453 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || |||||||||| |||||||||| Sbjct: 9724452 cggtcggccacgtcgccgtgtgctgg 9724427
>dbj|AK070457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050C03, full insert sequence Length = 1470 Score = 178 bits (90), Expect = 1e-41 Identities = 225/270 (83%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggcaaaacggccccatctgc 61 ||||||||||| ||||||||||||| || || || ||| | || || | || ||| ||| Sbjct: 370 tggcgagcagcctggacacgctgtgcggccaggcgttcagcgcgaagcagcaccacatgc 429 Query: 62 tcggcatctacaagcagagggcgatccttgtgctcactctggtgagcgtcgtggttgcgg 121 ||||| | ||||||||| ||||||| || |||||| | |||||||||||| | | |||| Sbjct: 430 tcggcgtgtacaagcagcgggcgatgctggtgctcgcgctggtgagcgtcccgatcgcgg 489 Query: 122 tgctctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgcca 181 | ||||||| |||||||| |||||||||| || | |||||||||||||||||||| Sbjct: 490 cggtctgggccttcaccggcgagatcctcctcgtcgtcggccaggacccggagatcgcgg 549 Query: 182 tgggggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgc 241 ||| || ||||||||||||||||||||||||||| |||| |||| |||| || ||||| Sbjct: 550 cgggcgccgggagctacatccggtggatgatcccgacgctgttcgtctacgggccgctgc 609 Query: 242 agtgccacgtccggttcctccagacgcaga 271 ||||||||||||||||||| |||||||||| Sbjct: 610 agtgccacgtccggttcctgcagacgcaga 639
>ref|XM_472177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 125 tctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgccatgg 184 ||||||| | |||||| || |||||||||| || || ||||||||||||||||| || Sbjct: 392 tctgggcctacaccggcgagctcctcctgctgttcgggcaggacccggagatcgcggcgg 451 Query: 185 gggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagt 244 ||| ||||||||||||||||||||||||||| |||| | || |||| || ||||||| Sbjct: 452 cggcggggagctacatccggtggatgatcccggcgctgctggcgtacgggcccctgcagt 511 Query: 245 gccacgtccggttcctccagacgcagaac 273 |||||||||||||||| |||||||||||| Sbjct: 512 gccacgtccggttcctgcagacgcagaac 540 Score = 93.7 bits (47), Expect = 6e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 477 ggaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||| |||| | ||| ||||||||| |||||| || || || || |||||||| Sbjct: 744 ggaggcgttccacgacttggtcggcttcatgaggctcgctgttccttctgctctcatggt 803 Query: 537 ttgcttagagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatcc 596 ||||| |||||||||||||||||||| || || || |||||||| || ||| ||||||| Sbjct: 804 ctgcttggagtggtggtcgtttgagctccttgtgctgctctccggactactcccaaatcc 863 Query: 597 taagctcgaggcatc 611 ||||| || ||||| Sbjct: 864 gaagctggaagcatc 878 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggc 44 ||||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 269 tggcgagcagcctggacacgctgtgcgggcaggcgttcggggc 311
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 125 tctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgccatgg 184 ||||||| | |||||| || |||||||||| || || ||||||||||||||||| || Sbjct: 18224105 tctgggcctacaccggcgagctcctcctgctgttcgggcaggacccggagatcgcggcgg 18224164 Query: 185 gggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagt 244 ||| ||||||||||||||||||||||||||| |||| | || |||| || ||||||| Sbjct: 18224165 cggcggggagctacatccggtggatgatcccggcgctgctggcgtacgggcccctgcagt 18224224 Query: 245 gccacgtccggttcctccagacgcagaac 273 |||||||||||||||| |||||||||||| Sbjct: 18224225 gccacgtccggttcctgcagacgcagaac 18224253 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 539 gcttagagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatccta 598 |||| |||||||||||||||||||| || || || |||||||| || ||| ||||||| | Sbjct: 18225017 gcttggagtggtggtcgtttgagctccttgtgctgctctccggactactcccaaatccga 18225076 Query: 599 agctcgaggcatc 611 |||| || ||||| Sbjct: 18225077 agctggaagcatc 18225089 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggc 44 ||||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 18223982 tggcgagcagcctggacacgctgtgcgggcaggcgttcggggc 18224024 Score = 40.1 bits (20), Expect = 8.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 477 ggaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||| |||| | ||| ||||||||| |||||| || || || || |||||||| Sbjct: 18224457 ggaggcgttccacgacttggtcggcttcatgaggctcgctgttccttctgctctcatggt 18224516
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 125 tctgggcgttcaccgggcagatcctcctgctcttgggccaggacccggagatcgccatgg 184 ||||||| | |||||| || |||||||||| || || ||||||||||||||||| || Sbjct: 59779 tctgggcctacaccggcgagctcctcctgctgttcgggcaggacccggagatcgcggcgg 59838 Query: 185 gggcagggagctacatccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagt 244 ||| ||||||||||||||||||||||||||| |||| | || |||| || ||||||| Sbjct: 59839 cggcggggagctacatccggtggatgatcccggcgctgctggcgtacgggcccctgcagt 59898 Query: 245 gccacgtccggttcctccagacgcagaac 273 |||||||||||||||| |||||||||||| Sbjct: 59899 gccacgtccggttcctgcagacgcagaac 59927 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 539 gcttagagtggtggtcgtttgagctgctggtacttctctccgggcttctcgcaaatccta 598 |||| |||||||||||||||||||| || || || |||||||| || ||| ||||||| | Sbjct: 60691 gcttggagtggtggtcgtttgagctccttgtgctgctctccggactactcccaaatccga 60750 Query: 599 agctcgaggcatc 611 |||| || ||||| Sbjct: 60751 agctggaagcatc 60763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 2 tggcgagcagcttggacacgctgtgtgggcaagccttcggggc 44 ||||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 59656 tggcgagcagcctggacacgctgtgcgggcaggcgttcggggc 59698 Score = 40.1 bits (20), Expect = 8.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 477 ggaggcgttccgcgacatcgtcagcttcatgaagctcgccgtgccatccgcgctcatggt 536 ||||||||||| |||| | ||| ||||||||| |||||| || || || || |||||||| Sbjct: 60131 ggaggcgttccacgacttggtcggcttcatgaggctcgctgttccttctgctctcatggt 60190
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 16978766 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 16978825 Query: 261 ccagacgcagaacatcgtcctcccggcaatggcgagc 297 |||||||||||| | || ||||||| ||||||||| Sbjct: 16978826 gcagacgcagaacgtggtgctcccggtgatggcgagc 16978862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 17049134 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 17049193 Query: 261 ccagacgcagaacat 275 |||||||||||||| Sbjct: 17049194 gcagacgcagaacat 17049208 Score = 79.8 bits (40), Expect = 1e-11 Identities = 121/148 (81%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| ||||| || ||||| |||||||||| Sbjct: 17024927 ccggtggatgatcccggcgctgttcgcctacggcctgctccactgccaaatccggttcct 17024986 Query: 261 ccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggcca 320 |||||||||||| |||| ||||||| |||||| | | |||| |||||||| |||| Sbjct: 17024987 gcagacgcagaacgtcgtgctcccggtcatggcggccgccggcgcgacggcgctgtgcca 17025046 Query: 321 cgttctcgtgtgctggttgctggtctac 348 | | ||||| |||||| |||| |||||| Sbjct: 17025047 cctcctcgtctgctgggtgctcgtctac 17025074
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1423D04 Length = 154474 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 111788 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 111847 Query: 261 ccagacgcagaacatcgtcctcccggcaatggcgagc 297 |||||||||||| | || ||||||| ||||||||| Sbjct: 111848 gcagacgcagaacgtggtgctcccggtgatggcgagc 111884
>dbj|AK067594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109D22, full insert sequence Length = 1853 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 694 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 753 Query: 261 ccagacgcagaacatcgtcctcccggcaatggcgagc 297 |||||||||||| | || ||||||| ||||||||| Sbjct: 754 gcagacgcagaacgtggtgctcccggtgatggcgagc 790 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Plus Query: 497 tcagcttcatgaagctcgccgtgccatccgcgctcatggtttgcttagagtggtggtcgt 556 |||||||| | | ||||||| | || ||||| |||||||| ||||| ||| |||||||| Sbjct: 990 tcagcttcttcaggctcgccatcccttccgctctcatggtctgcttggagatgtggtcgt 1049 Query: 557 ttgagct 563 ||||||| Sbjct: 1050 ttgagct 1056
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 49986 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 50045 Query: 261 ccagacgcagaacat 275 |||||||||||||| Sbjct: 50046 gcagacgcagaacat 50060 Score = 79.8 bits (40), Expect = 1e-11 Identities = 121/148 (81%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| ||||| || ||||| |||||||||| Sbjct: 25779 ccggtggatgatcccggcgctgttcgcctacggcctgctccactgccaaatccggttcct 25838 Query: 261 ccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggcca 320 |||||||||||| |||| ||||||| |||||| | | |||| |||||||| |||| Sbjct: 25839 gcagacgcagaacgtcgtgctcccggtcatggcggccgccggcgcgacggcgctgtgcca 25898 Query: 321 cgttctcgtgtgctggttgctggtctac 348 | | ||||| |||||| |||| |||||| Sbjct: 25899 cctcctcgtctgctgggtgctcgtctac 25926
>dbj|AK109873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B05, full insert sequence Length = 1721 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 201 ccggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcct 260 |||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| Sbjct: 465 ccggtggatgatcccggcgctgttcgcctacggcccgctgcagtgccacgtccggttcct 524 Query: 261 ccagacgcagaacat 275 |||||||||||||| Sbjct: 525 gcagacgcagaacat 539
>ref|NM_195894.1| Oryza sativa (japonica cultivar-group) putative transmembrane protein (OSJNBa0045C13.3), mRNA Length = 1461 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 ||||||||| ||||||||||| ||| |||| || ||| ||||||||| |||||||||| Sbjct: 484 cggtggatgctcccgtcgctcgccgcctacgtgccgctccagtgccacatccggttcctg 543 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggccac 321 |||||||||| | |||| ||||| | | ||||||||| | || ||| |||||| |||| Sbjct: 544 cagacgcagaccgtcgtgctccccgtcacggcgagctccgccgccaccgcgctcctccac 603 Query: 322 gttctcgtgtgctggttgct 341 |||||||||||| |||| Sbjct: 604 ccgctcgtgtgctggctgct 623
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 ||||||||| ||||||||||| ||| |||| || ||| ||||||||| |||||||||| Sbjct: 20979 cggtggatgctcccgtcgctcgccgcctacgtgccgctccagtgccacatccggttcctg 20920 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggccac 321 |||||||||| | |||| ||||| | | ||||||||| | || ||| |||||| |||| Sbjct: 20919 cagacgcagaccgtcgtgctccccgtcacggcgagctccgccgccaccgcgctcctccac 20860 Query: 322 gttctcgtgtgctggttgct 341 |||||||||||| |||| Sbjct: 20859 ccgctcgtgtgctggctgct 20840 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 11035 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 11094 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 11095 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 11145
>dbj|AK069792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K22, full insert sequence Length = 1903 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 ||||||||| ||||||||||| ||| |||| || ||| ||||||||| |||||||||| Sbjct: 466 cggtggatgctcccgtcgctcgccgcctacgtgccgctccagtgccacatccggttcctg 525 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcgctcggccac 321 |||||||||| | |||| ||||| | | ||||||||| | || ||| |||||| |||| Sbjct: 526 cagacgcagaccgtcgtgctccccgtcacggcgagctccgccgccaccgcgctcctccac 585 Query: 322 gttctcgtgtgctggttgct 341 |||||||||||| |||| Sbjct: 586 ccgctcgtgtgctggctgct 605
>ref|NM_195885.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.8), mRNA Length = 1545 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 509 agctcgccgtgccatccgcgctcatggtttgcttagagtggtggtcgtttgag 561 ||||||||||||| ||||| | ||||| ||||| |||||||||||||||||| Sbjct: 782 agctcgccgtgccgtccgccatgatggtctgcttggagtggtggtcgtttgag 834 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 524 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 583 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || |||||||||| |||||||||| Sbjct: 584 cggtcggccacgtcgccgtgtgctgg 609
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 509 agctcgccgtgccatccgcgctcatggtttgcttagagtggtggtcgtttgag 561 ||||||||||||| ||||| | ||||| ||||| |||||||||||||||||| Sbjct: 934 agctcgccgtgccgtccgccatgatggtctgcttggagtggtggtcgtttgag 986 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 676 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 735 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || |||||||||| |||||||||| Sbjct: 736 cggtcggccacgtcgccgtgtgctgg 761
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 539 gcttagagtggtggtcgtttgagctgctggtacttctctc 578 |||| ||||||||||||||||||||||| || |||||||| Sbjct: 125586 gcttggagtggtggtcgtttgagctgctcgttcttctctc 125547 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 289 atggcgagctcgggcgtcacggcgctcggccacgt 323 ||||| ||||| |||||||||||||||| |||||| Sbjct: 125944 atggccagctccggcgtcacggcgctcgcccacgt 125910
>ref|NM_195893.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBa0045C13.2), mRNA Length = 1434 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 457 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 516 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 517 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 567
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 131081 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 131140 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 131141 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 131191 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 89251 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 89192 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || ||| ||||||| |||||||||| Sbjct: 89191 cggtcgcccacgttgccgtgtgctgg 89166 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 70998 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 70939 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || |||||||||| |||||||||| Sbjct: 70938 cggtcggccacgtcgccgtgtgctgg 70913
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 519 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 578 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 579 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 629
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 54.0 bits (27), Expect = 6e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 202 cggtggatgatcccgtcgctcttcgcttacgcgctgctgcagtgccacgtccggttcctc 261 |||||| |||||||||||||| || | | || || |||| ||||||| |||||||||| Sbjct: 530 cggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctg 589 Query: 262 cagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacggcg 312 ||| |||||| | ||| || |||| |||||||||| |||||||||||| Sbjct: 590 caggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcg 640
>ref|NM_195888.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.11), mRNA Length = 975 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 251 tccggttcctccagacgcagaacatcgtcctcccggcaatggcgagctcgggcgtcacgg 310 |||||||||| ||| ||||| ||||||| | |||| ||||||||||| ||||| ||| Sbjct: 443 tccggttcctgcaggcgcagggcatcgtcgtgccggtgatggcgagctccggcgtggcgg 502 Query: 311 cgctcggccacgttctcgtgtgctgg 336 || ||| ||||||| |||||||||| Sbjct: 503 cggtcgcccacgttgccgtgtgctgg 528 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 509 agctcgccgtgccatccgcgctcatggtttgcttagagtggtggtcgtttgag 561 ||||||||||||| ||||| | ||||| ||||| ||||||| |||||||||| Sbjct: 701 agctcgccgtgccgtccgccatgatggtctgcttggagtggtcgtcgtttgag 753
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 539 gcttagagtggtggtcgtttgagctgct 566 |||| ||||||||||||||||||||||| Sbjct: 133114 gcttggagtggtggtcgtttgagctgct 133087 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 atggcgagctcgggcgtcacggcgctcg 316 ||||| ||||| |||||||||||||||| Sbjct: 133476 atggccagctccggcgtcacggcgctcg 133449
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gggcgttcaccgggcagatcc 148 ||||||||||||||||||||| Sbjct: 1069932 gggcgttcaccgggcagatcc 1069952
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggcaacaagggcgctgccctg 381 ||||||||||||||||||||| Sbjct: 3308843 ggcaacaagggcgctgccctg 3308863
>gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, complete sequence Length = 167587 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 agagcacctggacagggctct 472 ||||||||||||||||||||| Sbjct: 146117 agagcacctggacagggctct 146097
>gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, complete sequence Length = 132528 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 agagcacctggacagggctct 472 ||||||||||||||||||||| Sbjct: 102033 agagcacctggacagggctct 102013
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggcaacaagggcgctgccctg 381 ||||||||||||||||||||| Sbjct: 3304991 ggcaacaagggcgctgccctg 3305011
>gb|M55337.1|HUMTRK4A Human oncogene tyrosine protein kinase receptor (trk4) mRNA, partial cds Length = 354 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 tcctcctgctcttgggccagg 166 ||||||||||||||||||||| Sbjct: 56 tcctcctgctcttgggccagg 36
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggcaacaagggcgctgccct 380 |||||||||||||||||||| Sbjct: 1160334 ggcaacaagggcgctgccct 1160315
>gb|AY601745.1| Diachasmimorpha longicaudata clone Dl(A)mar19 transposon mariner, complete sequence Length = 1279 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcggggcaaaacggccccat 57 |||||||||||||||||||| Sbjct: 875 tcggggcaaaacggccccat 894
>ref|XM_618035.2| PREDICTED: Bos taurus hypothetical LOC537848 (LOC537848), mRNA Length = 615 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 142 cagatcctcctgctcttgggccaggacc 169 ||||| ||||||||| |||||||||||| Sbjct: 343 cagatgctcctgctcatgggccaggacc 370
>gb|AY611728.1| Aegilops bicornis high molecular weight glutenin subunit 1Sy-2.5b gene, complete cds Length = 3591 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gggcaacaagggcgctgccc 379 |||||||||||||||||||| Sbjct: 2958 gggcaacaagggcgctgccc 2977
>ref|XM_541319.2| PREDICTED: Canis familiaris similar to nuclear protein in testis (LOC484203), mRNA Length = 741 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cctccagacgcagaacatcgtcct 281 ||||||||| |||||||||||||| Sbjct: 303 cctccagactcagaacatcgtcct 326
>ref|XM_847877.1| PREDICTED: Canis familiaris similar to nuclear protein in testis (LOC610384), mRNA Length = 2070 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cctccagacgcagaacatcgtcct 281 ||||||||| |||||||||||||| Sbjct: 252 cctccagactcagaacatcgtcct 275
>emb|AL049759.10|HSJ930L11 Human DNA sequence from clone RP5-930L11 on chromosome 22q11.21-11.23, complete sequence Length = 134957 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gcacctggacagggctctca 474 |||||||||||||||||||| Sbjct: 74861 gcacctggacagggctctca 74880
>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence Length = 186317 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 acagggctctcaaaggaggc 482 |||||||||||||||||||| Sbjct: 95041 acagggctctcaaaggaggc 95060
>gb|AC009309.4| Homo sapiens BAC clone RP11-301O19 from 2, complete sequence Length = 170720 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 caagattgggctgggcaaca 367 |||||||||||||||||||| Sbjct: 15538 caagattgggctgggcaaca 15519
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tctccatcctgcaagagcac 458 |||||||||||||||||||| Sbjct: 151924 tctccatcctgcaagagcac 151943
>gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, complete sequence Length = 179835 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tctccatcctgcaagagcac 458 |||||||||||||||||||| Sbjct: 5626 tctccatcctgcaagagcac 5645
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cctggccaacggcatctcgt 397 |||||||||||||||||||| Sbjct: 8185403 cctggccaacggcatctcgt 8185422
>dbj|BS000181.1| Pan troglodytes chromosome 22 clone:PTB-128M13, map 22, complete sequences Length = 199436 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cgatcttggctctctacatc 432 |||||||||||||||||||| Sbjct: 49602 cgatcttggctctctacatc 49583
>dbj|BS000154.1| Pan troglodytes chromosome 22 clone:RP43-091K15, map 22, complete sequences Length = 155153 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cgatcttggctctctacatc 432 |||||||||||||||||||| Sbjct: 109521 cgatcttggctctctacatc 109502
>gb|AY109601.1| Zea mays CL155_1 mRNA sequence Length = 1308 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cgtcacggcgctcggccacg 322 |||||||||||||||||||| Sbjct: 35 cgtcacggcgctcggccacg 54
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence Length = 237824 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tctccatcctgcaagagcac 458 |||||||||||||||||||| Sbjct: 235006 tctccatcctgcaagagcac 235025 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,115,472 Number of Sequences: 3902068 Number of extensions: 4115472 Number of successful extensions: 73926 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73371 Number of HSP's gapped (non-prelim): 542 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
