| Clone Name | rbaal9p05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TNR6_MOUSE (P25446) Tumor necrosis factor receptor superfamily m... | 30 | 1.8 | 2 | PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior... | 28 | 6.9 | 3 | CHEA_ENTAE (P21813) Chemotaxis protein cheA (EC 2.7.13.3) (Fragm... | 28 | 9.0 |
|---|
>TNR6_MOUSE (P25446) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 327 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +2 Query: 86 PTTEGKEYSTPNNPA--IRRCILCSE 157 P TEGKEY N+ A RRC LC E Sbjct: 80 PCTEGKEYMDKNHYADKCRRCTLCDE 105
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 28.1 bits (61), Expect = 6.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 66 EQGLIMTLQQKGRNTVHLIIQPSGDAS 146 E+ + T +Q+G +T HLI PS D S Sbjct: 346 EEAALATPEQRGDDTEHLIFSPSDDMS 372
>CHEA_ENTAE (P21813) Chemotaxis protein cheA (EC 2.7.13.3) (Fragment)| Length = 226 Score = 27.7 bits (60), Expect = 9.0 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 27 YKV*HWAGHNTSLEQGLIMTLQQKGRNTVHLIIQPSG 137 Y+V AG T QG+++ LQ GR L+ Q G Sbjct: 138 YRVFECAGAKTEATQGIVVILQSAGRRNALLVDQLIG 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,848,552 Number of Sequences: 219361 Number of extensions: 402411 Number of successful extensions: 1031 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1031 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)