ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16f05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092O17, full insert sequence Length = 2340 Score = 391 bits (197), Expect = e-105 Identities = 442/524 (84%), Gaps = 3/524 (0%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 728 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 787 Query: 99 gaaaaggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggag 158 |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 788 gaaaaggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggag 847 Query: 159 cttaacacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacg 218 |||||||||||||| |||||||| || |||||||| || ||||||||||| |||||||| Sbjct: 848 cttaacacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcact 907 Query: 219 aaaattgttgcagataatatccattatgctaaagctgtgaagatgatgggcaatcgtgtt 278 |||||||| || ||||| || || || || |||| ||||||||||||||| |||| | Sbjct: 908 aaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggact 967 Query: 279 aatgcagtgaaccttgacttctctgagatactacca---gaagaagtggaagcagagctg 335 || |||| | |||||| |||||||||||||| || || || || |||||| |||| Sbjct: 968 aacgcagaaagccttgatttctctgagatactttcagatgatgaggttgaagcacagcta 1027 Query: 336 aaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatc 395 || ||||| || ||||| ||||||||||||||||| | ||| |||||| | || ||| Sbjct: 1028 aaagaggcggcagtaatatccatgggaacagaagttagtgaacttgacttgctaaatatc 1087 Query: 396 anggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactat 455 | ||| ||||||||||| || |||||||||||||||||||||||||||| | ||| ||| Sbjct: 1088 agggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattat 1147 Query: 456 ctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgtt 515 || | ||| |||||||| || || || || || ||||||||||||||||| ||| | ||| Sbjct: 1148 ctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgttggcgaattggtt 1207 Query: 516 ggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 1208 ggtgctcgacttattgcacatggcggcagtttggtaaatctggc 1251
>dbj|AK101143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026N20, full insert sequence Length = 1882 Score = 391 bits (197), Expect = e-105 Identities = 442/524 (84%), Gaps = 3/524 (0%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 613 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 672 Query: 99 gaaaaggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggag 158 |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 673 gaaaaggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggag 732 Query: 159 cttaacacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacg 218 |||||||||||||| |||||||| || |||||||| || ||||||||||| |||||||| Sbjct: 733 cttaacacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcact 792 Query: 219 aaaattgttgcagataatatccattatgctaaagctgtgaagatgatgggcaatcgtgtt 278 |||||||| || ||||| || || || || |||| ||||||||||||||| |||| | Sbjct: 793 aaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggact 852 Query: 279 aatgcagtgaaccttgacttctctgagatactacca---gaagaagtggaagcagagctg 335 || |||| | |||||| |||||||||||||| || || || || |||||| |||| Sbjct: 853 aacgcagaaagccttgatttctctgagatactttcagatgatgaggttgaagcacagcta 912 Query: 336 aaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatc 395 || ||||| || ||||| ||||||||||||||||| | ||| |||||| | || ||| Sbjct: 913 aaagaggcggcagtaatatccatgggaacagaagttagtgaacttgacttgctaaatatc 972 Query: 396 anggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactat 455 | ||| ||||||||||| || |||||||||||||||||||||||||||| | ||| ||| Sbjct: 973 agggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattat 1032 Query: 456 ctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgtt 515 || | ||| |||||||| || || || || || ||||||||||||||||| ||| | ||| Sbjct: 1033 ctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgttggcgaattggtt 1092 Query: 516 ggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 1093 ggtgctcgacttattgcacatggcggcagtttggtaaatctggc 1136
>dbj|AB015431.1| Oryza sativa mRNA for SAR DNA binding protein, partial cds Length = 1638 Score = 391 bits (197), Expect = e-105 Identities = 442/524 (84%), Gaps = 3/524 (0%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 582 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 641 Query: 99 gaaaaggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggag 158 |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 642 gaaaaggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggag 701 Query: 159 cttaacacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacg 218 |||||||||||||| |||||||| || |||||||| || ||||||||||| |||||||| Sbjct: 702 cttaacacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcact 761 Query: 219 aaaattgttgcagataatatccattatgctaaagctgtgaagatgatgggcaatcgtgtt 278 |||||||| || ||||| || || || || |||| ||||||||||||||| |||| | Sbjct: 762 aaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggact 821 Query: 279 aatgcagtgaaccttgacttctctgagatactacca---gaagaagtggaagcagagctg 335 || |||| | |||||| |||||||||||||| || || || || |||||| |||| Sbjct: 822 aacgcagaaagccttgatttctctgagatactttcagatgatgaggttgaagcacagcta 881 Query: 336 aaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatc 395 || ||||| || ||||| ||||||||||||||||| | ||| |||||| | || ||| Sbjct: 882 aaagaggcggcagtaatatccatgggaacagaagttagtgaacttgacttgctaaatatc 941 Query: 396 anggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactat 455 | ||| ||||||||||| || |||||||||||||||||||||||||||| | ||| ||| Sbjct: 942 agggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattat 1001 Query: 456 ctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgtt 515 || | ||| |||||||| || || || || || ||||||||||||||||| ||| | ||| Sbjct: 1002 ctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgttggcgaattggtt 1061 Query: 516 ggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 1062 ggtgctcgacttattgcacatggcggcagtttggtaaatctggc 1105
>gb|AY106099.1| Zea mays PCO066535 mRNA sequence Length = 1500 Score = 353 bits (178), Expect = 4e-94 Identities = 355/414 (85%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 ||||||||||||||||||||||||||||||||||| ||||| || || |||||||| || Sbjct: 57 ttggatgatcttgacaaggagcttaacacttatgccatgagagttcgtgaatggtatggc 116 Query: 198 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 257 ||||||||||| |||||||| ||||| ||| |||||||||| || ||||| |||| |||| Sbjct: 117 tggcactttccagagctcaccaaaatagttacagataatatacagtatgccaaagttgtg 176 Query: 258 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 317 |||||||||||||| | ||||||||||| ||||||||||||||||||||| | |||| Sbjct: 177 aagatgatgggcaacagagttaatgcagtcaaccttgacttctctgagatattgtcagat 236 Query: 318 gaag---tggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaat 374 |||| | ||| || |||| ||||||||||| ||||| ||||||||||||||||| | | Sbjct: 237 gaagagctagaaacacagctaaaggaggcagcagtaatatccatgggaacagaagttagt 296 Query: 375 gagcttgacctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtac 434 || |||||| | ||||| |||| || || ||||||||||| ||||| |||||||||||| Sbjct: 297 gaccttgacttatcgaatatcagagagctatgtgatcaagtgctggccctttctgagtac 356 Query: 435 agagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgact 494 ||||||||||| ||||||||| ||| ||| |||||||| || ||||| || || ||||| Sbjct: 357 agagcccagctgtatgactatttaagaagcaggatgaacactattgcaccaaatttgaca 416 Query: 495 gcacttgttggtgaacttgttggcgctcgccttattgcacatggtggtagtttg 548 ||||| || |||||| | ||||| ||||||||||||||||||||||| |||||| Sbjct: 417 gcactggtgggtgaattagttggtgctcgccttattgcacatggtggaagtttg 470 Score = 60.0 bits (30), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 116 gatcattcangcaattggcttgttggatgatcttgacaaggagcttaac 164 |||||| || || ||||| || ||||||||||||||||||||||||||| Sbjct: 66 gatcatccaagccattggattattggatgatcttgacaaggagcttaac 18
>dbj|AK073164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023B01, full insert sequence Length = 2147 Score = 335 bits (169), Expect = 9e-89 Identities = 435/524 (83%), Gaps = 3/524 (0%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 603 ggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcct 662 Query: 99 gaaaaggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggag 158 |||||||||||||||||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 663 gaaaaggttgatactatgatcattcaggccattggattattggatgatcttgataaggag 722 Query: 159 cttaacacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacg 218 || |||||||| || |||||||| || |||||||| || |||||||| || |||||||| Sbjct: 723 ctcaacacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcact 782 Query: 219 aaaattgttgcagataatatccattatgctaaagctgtgaagatgatgggcaatcgtgtt 278 |||||||| || ||||| || || || || |||| ||||||||||||||| |||| | Sbjct: 783 aaaattgtagctgataacatacagtacgcaaaagttgtgaagatgatgggtgatcggact 842 Query: 279 aatgcagtgaaccttgacttctctgagatactacca---gaagaagtggaagcagagctg 335 || |||| | |||||| |||||||||||||| || || || || |||||| || | Sbjct: 843 aacgcagaaagccttgatttctctgagatactctcagatgatgaggttgaagcacagtta 902 Query: 336 aaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatc 395 || ||||| || ||||| ||||||||||||||||| | ||| ||||| | || ||| Sbjct: 903 aaagaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatc 962 Query: 396 anggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactat 455 | ||| ||||||||||| || |||||||||||||||||||||||||||| | ||| ||| Sbjct: 963 agggagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattat 1022 Query: 456 ctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgtt 515 || | ||| |||||||| || || || || || |||||||||||||| || ||| | ||| Sbjct: 1023 ctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggtt 1082 Query: 516 ggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||||| ||||||||||| ||||| |||||| | |||||||| Sbjct: 1083 ggtgctcgacttattgcacacggtggcagtttggtaaatctggc 1126
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 148/166 (89%) Strand = Plus / Minus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| Sbjct: 13102876 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13102817 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 |||||||||| |||||||| || |||||||| || ||||||||||| |||||||| |||| Sbjct: 13102816 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13102757 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13102756 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13102711 Score = 151 bits (76), Expect = 3e-33 Identities = 143/166 (86%) Strand = Plus / Minus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || ||||| || |||||||||||||| |||||||| | Sbjct: 13110191 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13110132 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 ||||||| || |||||||| || |||||||| || |||||||| || |||||||| |||| Sbjct: 13110131 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13110072 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13110071 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13110026 Score = 145 bits (73), Expect = 2e-31 Identities = 195/236 (82%) Strand = Plus / Minus Query: 324 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 383 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 13102563 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 13102504 Query: 384 ctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 443 | || |||| ||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 13102503 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 13102444 Query: 444 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 503 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 13102443 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 13102384 Query: 504 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 13102383 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggc 13102328 Score = 123 bits (62), Expect = 7e-25 Identities = 181/221 (81%) Strand = Plus / Minus Query: 339 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcang 398 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||| | Sbjct: 13109862 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 13109803 Query: 399 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 458 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 13109802 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 13109743 Query: 459 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 518 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 13109742 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 13109683 Query: 519 gctcgccttattgcacatggtggtagtttgatgaatctggc 559 ||||| ||||||||||| ||||| |||||| | |||||||| Sbjct: 13109682 gctcgacttattgcacacggtggcagtttggtaaatctggc 13109642 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 13110536 ggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcct 13110477 Query: 99 gaaaaggtt 107 ||||||||| Sbjct: 13110476 gaaaaggtt 13110468 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 13103222 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 13103163 Query: 99 gaaaaggt 106 |||||||| Sbjct: 13103162 gaaaaggt 13103155
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 190 bits (96), Expect = 3e-45 Identities = 148/166 (89%) Strand = Plus / Plus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| Sbjct: 123762 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 123821 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 |||||||||| |||||||| || |||||||| || ||||||||||| |||||||| |||| Sbjct: 123822 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 123881 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 123882 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 123927 Score = 151 bits (76), Expect = 3e-33 Identities = 143/166 (86%) Strand = Plus / Plus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || ||||| || |||||||||||||| |||||||| | Sbjct: 116447 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 116506 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 ||||||| || |||||||| || |||||||| || |||||||| || |||||||| |||| Sbjct: 116507 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 116566 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 116567 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 116612 Score = 145 bits (73), Expect = 2e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 324 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 383 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 124075 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 124134 Query: 384 ctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 443 | || |||| ||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 124135 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 124194 Query: 444 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 503 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 124195 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 124254 Query: 504 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 124255 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggc 124310 Score = 123 bits (62), Expect = 7e-25 Identities = 181/221 (81%) Strand = Plus / Plus Query: 339 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcang 398 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||| | Sbjct: 116776 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 116835 Query: 399 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 458 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 116836 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 116895 Query: 459 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 518 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 116896 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 116955 Query: 519 gctcgccttattgcacatggtggtagtttgatgaatctggc 559 ||||| ||||||||||| ||||| |||||| | |||||||| Sbjct: 116956 gctcgacttattgcacacggtggcagtttggtaaatctggc 116996 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 116102 ggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcct 116161 Query: 99 gaaaaggtt 107 ||||||||| Sbjct: 116162 gaaaaggtt 116170 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 123416 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 123475 Query: 99 gaaaaggt 106 |||||||| Sbjct: 123476 gaaaaggt 123483
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 148/166 (89%) Strand = Plus / Minus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| Sbjct: 13099651 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13099592 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 |||||||||| |||||||| || |||||||| || ||||||||||| |||||||| |||| Sbjct: 13099591 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13099532 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13099531 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13099486 Score = 151 bits (76), Expect = 3e-33 Identities = 143/166 (86%) Strand = Plus / Minus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||||||||||||||||||||| || ||||| || |||||||||||||| |||||||| | Sbjct: 13106966 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13106907 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcccgagctcacgaaaa 222 ||||||| || |||||||| || |||||||| || |||||||| || |||||||| |||| Sbjct: 13106906 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13106847 Query: 223 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 268 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13106846 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13106801 Score = 145 bits (73), Expect = 2e-31 Identities = 195/236 (82%) Strand = Plus / Minus Query: 324 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 383 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 13099338 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 13099279 Query: 384 ctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 443 | || |||| ||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 13099278 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 13099219 Query: 444 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 503 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 13099218 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 13099159 Query: 504 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggc 559 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||| Sbjct: 13099158 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggc 13099103 Score = 123 bits (62), Expect = 7e-25 Identities = 181/221 (81%) Strand = Plus / Minus Query: 339 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcang 398 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||| | Sbjct: 13106637 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 13106578 Query: 399 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 458 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 13106577 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 13106518 Query: 459 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 518 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 13106517 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 13106458 Query: 519 gctcgccttattgcacatggtggtagtttgatgaatctggc 559 ||||| ||||||||||| ||||| |||||| | |||||||| Sbjct: 13106457 gctcgacttattgcacacggtggcagtttggtaaatctggc 13106417 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct: 13107311 ggtccaatgagccttggattgtcccacagcctgtctagatataagctgaagttcagtcct 13107252 Query: 99 gaaaaggtt 107 ||||||||| Sbjct: 13107251 gaaaaggtt 13107243 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 39 ggtccaatgagcctaggattgtcccacagcttgtctaggtataagctgaagttcagccct 98 |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 13099997 ggtccaatgagccttggcttgtcccacagtttgtctagatataagctgaagttcagtcct 13099938 Query: 99 gaaaaggt 106 |||||||| Sbjct: 13099937 gaaaaggt 13099930
>gb|BT013761.1| Lycopersicon esculentum clone 132644F, mRNA sequence Length = 2206 Score = 135 bits (68), Expect = 2e-28 Identities = 243/302 (80%) Strand = Plus / Plus Query: 81 aagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttgttg 140 |||||||| || || ||||| ||||| ||||| ||||| | || || ||||| |||||| Sbjct: 604 aagctgaaatttagtcctgacaaggtggatacaatgattgtccaggccattggtttgttg 663 Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 ||||||||||| || ||||| ||||| ||||| |||||||| || |||||||| || ||| Sbjct: 664 gatgatcttgataaagagctgaacacctatgcaatgagggtacgagaatggtatggctgg 723 Query: 201 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 260 || ||||| |||||| | || ||||| |||||| |||| ||||||||| || || ||| Sbjct: 724 cattttcctgagctcgcaaagattgtacaagataacatcctttatgctaaggcggttaag 783 Query: 261 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 320 ||||||| | ||||| ||||| | || ||||| |||||||||||||| |||||||| Sbjct: 784 ttgatgggtgaccgtgtcaatgctgcaaagcttgatttctctgagatacttccagaagag 843 Query: 321 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 380 || || || || |||| |||||||| | ||||| |||||||| ||||||| ||| ||| Sbjct: 844 gttgaggctgaattgaaagaggcagccatgatttcaatgggaactgaagtcagtgatctt 903 Query: 381 ga 382 || Sbjct: 904 ga 905 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 507 gaacttgttggcgctcgccttattgcacatggtgg 541 ||||||||||| |||||||||||||| |||||||| Sbjct: 1030 gaacttgttggagctcgccttattgcgcatggtgg 1064
>dbj|AB059832.1| Nicotiana tabacum MARBPF mRNA for MAR-binding protein, complete cds Length = 1919 Score = 135 bits (68), Expect = 2e-28 Identities = 234/290 (80%) Strand = Plus / Plus Query: 81 aagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttgttg 140 ||||| ||||| |||||||| ||||| ||||| ||||| | || || ||| |||||||| Sbjct: 502 aagctaaagtttagccctgacaaggtggatacgatgattgtacaagccattagcttgttg 561 Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 ||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 562 gatgaccttgataaagagctaaacacatatgccatgagggtccgagaatggtacggttgg 621 Query: 201 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 260 || ||||| ||||| | || ||||| |||||| || | ||||| || ||||||||| Sbjct: 622 cattttccggagcttgcaaagattgtacaagataacattctatatgccaaggctgtgaag 681 Query: 261 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 320 |||||||| | ||||| ||||| | || || || |||||||||||||| |||||||| Sbjct: 682 ttgatgggcgaccgtgtaaatgcggcaaagctggatttctctgagatactgccagaagag 741 Query: 321 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagt 370 || || ||||| |||| |||||| | | ||||||||||| || ||||| Sbjct: 742 gttgaggcagaattgaaagaggcatccatgatttccatggggactgaagt 791 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 507 gaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatct 556 ||||||||||| ||||| |||||||| ||||| ||||| ||| ||||||| Sbjct: 928 gaacttgttggtgctcggcttattgcccatggcggtagcttgttgaatct 977
>ref|NM_111378.2| Arabidopsis thaliana DNA binding AT3G05060 mRNA, complete cds Length = 2002 Score = 121 bits (61), Expect = 3e-24 Identities = 367/470 (78%) Strand = Plus / Plus Query: 78 tataagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttg 137 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 535 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 594 Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 595 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 654 Query: 198 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 257 ||||| ||||||||||| | || || | |||| ||||||| ||||| ||| |||| Sbjct: 655 tggcattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgtt 714 Query: 258 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 317 || ||||||| || || |||||||| | || || |||||||| ||||| || |||| Sbjct: 715 aaattgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagat 774 Query: 318 gaagtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgag 377 ||| | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 775 gaaattgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgac 834 Query: 378 cttgacctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacaga 437 | ||| | | | ||||| ||||| ||||| || || || ||||||||||||||||| Sbjct: 835 ttagacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacaga 894 Query: 438 gcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgca 497 || ||||| || || || ||||| || || ||||| || |||||||| || ||||||| Sbjct: 895 gctcagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgcc 954 Query: 498 cttgttggtgaacttgttggcgctcgccttattgcacatggtggtagttt 547 || || || || |||||||| ||||| |||||| | ||||| |||||||| Sbjct: 955 ctggtaggagagcttgttggtgctcgtcttatttcccatggaggtagttt 1004
>gb|AY060573.1| Arabidopsis thaliana AT3g05060/T12H1_2 mRNA sequence Length = 1520 Score = 121 bits (61), Expect = 3e-24 Identities = 367/470 (78%) Strand = Plus / Plus Query: 78 tataagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttg 137 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 535 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 594 Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 595 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 654 Query: 198 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 257 ||||| ||||||||||| | || || | |||| ||||||| ||||| ||| |||| Sbjct: 655 tggcattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgtt 714 Query: 258 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 317 || ||||||| || || |||||||| | || || |||||||| ||||| || |||| Sbjct: 715 aaattgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagat 774 Query: 318 gaagtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgag 377 ||| | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 775 gaaattgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgac 834 Query: 378 cttgacctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacaga 437 | ||| | | | ||||| ||||| ||||| || || || ||||||||||||||||| Sbjct: 835 ttagacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacaga 894 Query: 438 gcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgca 497 || ||||| || || || ||||| || || ||||| || |||||||| || ||||||| Sbjct: 895 gctcagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgcc 954 Query: 498 cttgttggtgaacttgttggcgctcgccttattgcacatggtggtagttt 547 || || || || |||||||| ||||| |||||| | ||||| |||||||| Sbjct: 955 ctggtaggagagcttgttggtgctcgtcttatttcccatggaggtagttt 1004
>gb|AF412080.1|AF412080 Arabidopsis thaliana AT3g05060/T12H1_2 mRNA, complete cds Length = 1873 Score = 121 bits (61), Expect = 3e-24 Identities = 367/470 (78%) Strand = Plus / Plus Query: 78 tataagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttg 137 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 527 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 586 Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 587 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 646 Query: 198 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 257 ||||| ||||||||||| | || || | |||| ||||||| ||||| ||| |||| Sbjct: 647 tggcattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgtt 706 Query: 258 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 317 || ||||||| || || |||||||| | || || |||||||| ||||| || |||| Sbjct: 707 aaattgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagat 766 Query: 318 gaagtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgag 377 ||| | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 767 gaaattgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgac 826 Query: 378 cttgacctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacaga 437 | ||| | | | ||||| ||||| ||||| || || || ||||||||||||||||| Sbjct: 827 ttagacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacaga 886 Query: 438 gcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgca 497 || ||||| || || || ||||| || || ||||| || |||||||| || ||||||| Sbjct: 887 gctcagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgcc 946 Query: 498 cttgttggtgaacttgttggcgctcgccttattgcacatggtggtagttt 547 || || || || |||||||| ||||| |||||| | ||||| |||||||| Sbjct: 947 ctggtaggagagcttgttggtgctcgtcttatttcccatggaggtagttt 996
>gb|AF302491.1|AF302491 Arabidopsis thaliana NOP58-like protein mRNA, complete cds Length = 1602 Score = 121 bits (61), Expect = 3e-24 Identities = 367/470 (78%) Strand = Plus / Plus Query: 78 tataagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttg 137 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 442 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 501 Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 502 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 561 Query: 198 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 257 ||||| ||||||||||| | || || | |||| ||||||| ||||| ||| |||| Sbjct: 562 tggcattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgtt 621 Query: 258 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 317 || ||||||| || || |||||||| | || || |||||||| ||||| || |||| Sbjct: 622 aaattgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagat 681 Query: 318 gaagtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgag 377 ||| | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 682 gaaattgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgac 741 Query: 378 cttgacctctcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacaga 437 | ||| | | | ||||| ||||| ||||| || || || ||||||||||||||||| Sbjct: 742 ttagacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacaga 801 Query: 438 gcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgca 497 || ||||| || || || ||||| || || ||||| || |||||||| || ||||||| Sbjct: 802 gctcagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgcc 861 Query: 498 cttgttggtgaacttgttggcgctcgccttattgcacatggtggtagttt 547 || || || || |||||||| ||||| |||||| | ||||| |||||||| Sbjct: 862 ctggtaggagagcttgttggtgctcgtcttatttcccatggaggtagttt 911
>gb|AF061962.1|AF061962 Pisum sativum SAR DNA-binding protein (SARBP-1) mRNA, complete cds Length = 1952 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 405 tgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatctaaaaagt 464 |||||||| || ||| ||||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 788 tgtgatcaggttctgtctctttcagaatacagagctcagctctatgattatctaaagagt 847 Query: 465 aggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgc 524 |||||||| |||||||| ||||| |||||||| | ||||| || |||||||| |||||| Sbjct: 848 aggatgaacaccattgcacctaatttgactgctatggttggggagcttgttggtgctcgc 907 Query: 525 cttattgcacatggtggtag 544 || ||||| ||||| ||||| Sbjct: 908 ctcattgcccatgggggtag 927 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 ||||||||||| || ||| | || || ||||| ||||||||||| |||||||| |||||| Sbjct: 524 gatgatcttgataaagagttgaatacgtatgccatgagggtccgagaatggtatggttgg 583 Query: 201 cactttcc 208 || ||||| Sbjct: 584 cattttcc 591
>ref|NM_122594.2| Arabidopsis thaliana DNA binding AT5G27120 mRNA, complete cds Length = 1856 Score = 115 bits (58), Expect = 2e-22 Identities = 173/212 (81%) Strand = Plus / Plus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || ||||| Sbjct: 431 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttgtct 490 Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 |||||| | | || ||||| || |||||||| | || ||||| ||||| ||||| || Sbjct: 491 cacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgataatc 550 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 551 caagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagggtt 610 Query: 183 cgngaatggtacggttggcactttcccgagct 214 || ||||||| |||||||| ||||| ||||| Sbjct: 611 cgtgaatggtttggttggcattttcctgagct 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/161 (78%) Strand = Plus / Plus Query: 294 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 353 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 722 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 781 Query: 354 tccatgggaacagaagtcaatgagcttgacctctcgaacatcanggaactgtgtgatcaa 413 || |||||||| ||||||| ||| ||||| | | | ||||| ||||| ||||| || Sbjct: 782 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 841 Query: 414 gtcctggctctttctgagtacagagcccagctctatgacta 454 || || ||||| | ||||||||||| ||||| |||||||| Sbjct: 842 gttctttctcttgccgagtacagagctcagctttatgacta 882
>gb|AY074281.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1856 Score = 115 bits (58), Expect = 2e-22 Identities = 173/212 (81%) Strand = Plus / Plus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || ||||| Sbjct: 431 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttgtct 490 Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 |||||| | | || ||||| || |||||||| | || ||||| ||||| ||||| || Sbjct: 491 cacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgataatc 550 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 551 caagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagggtt 610 Query: 183 cgngaatggtacggttggcactttcccgagct 214 || ||||||| |||||||| ||||| ||||| Sbjct: 611 cgtgaatggtttggttggcattttcctgagct 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/161 (78%) Strand = Plus / Plus Query: 294 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 353 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 722 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 781 Query: 354 tccatgggaacagaagtcaatgagcttgacctctcgaacatcanggaactgtgtgatcaa 413 || |||||||| ||||||| ||| ||||| | | | ||||| ||||| ||||| || Sbjct: 782 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 841 Query: 414 gtcctggctctttctgagtacagagcccagctctatgacta 454 || || ||||| | ||||||||||| ||||| |||||||| Sbjct: 842 gttctttctcttgccgagtacagagctcagctttatgacta 882
>gb|AF302490.1|AF302490 Arabidopsis thaliana NOP58-like protein F108 mRNA, complete cds Length = 1781 Score = 115 bits (58), Expect = 2e-22 Identities = 173/212 (81%) Strand = Plus / Plus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || ||||| Sbjct: 364 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttgtct 423 Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 |||||| | | || ||||| || |||||||| | || ||||| ||||| ||||| || Sbjct: 424 cacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgataatc 483 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 484 caagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagggtt 543 Query: 183 cgngaatggtacggttggcactttcccgagct 214 || ||||||| |||||||| ||||| ||||| Sbjct: 544 cgtgaatggtttggttggcattttcctgagct 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/161 (78%) Strand = Plus / Plus Query: 294 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 353 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 655 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 714 Query: 354 tccatgggaacagaagtcaatgagcttgacctctcgaacatcanggaactgtgtgatcaa 413 || |||||||| ||||||| ||| ||||| | | | ||||| ||||| ||||| || Sbjct: 715 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 774 Query: 414 gtcctggctctttctgagtacagagcccagctctatgacta 454 || || ||||| | ||||||||||| ||||| |||||||| Sbjct: 775 gttctttctcttgccgagtacagagctcagctttatgacta 815
>gb|BT002060.1| Arabidopsis thaliana SAR DNA-binding protein - like (At5g27120) mRNA, partial cds Length = 1351 Score = 115 bits (58), Expect = 2e-22 Identities = 173/212 (81%) Strand = Plus / Plus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || ||||| Sbjct: 446 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttgtct 505 Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 |||||| | | || ||||| || |||||||| | || ||||| ||||| ||||| || Sbjct: 506 cacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgataatc 565 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 566 caagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagggtt 625 Query: 183 cgngaatggtacggttggcactttcccgagct 214 || ||||||| |||||||| ||||| ||||| Sbjct: 626 cgtgaatggtttggttggcattttcctgagct 657 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/161 (78%) Strand = Plus / Plus Query: 294 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 353 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 737 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 796 Query: 354 tccatgggaacagaagtcaatgagcttgacctctcgaacatcanggaactgtgtgatcaa 413 || |||||||| ||||||| ||| ||||| | | | ||||| ||||| ||||| || Sbjct: 797 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 856 Query: 414 gtcctggctctttctgagtacagagcccagctctatgacta 454 || || ||||| | ||||||||||| ||||| |||||||| Sbjct: 857 gttctttctcttgccgagtacagagctcagctttatgacta 897
>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE Length = 109575 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 421 ctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaataccattg 480 ||||||| || |||||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 32361 ctctttcagaatacagagctcagctctatgattatctaaagagtaggatgaataccattg 32420 Query: 481 ctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacatggtg 540 | || || |||||||| | ||||| || |||||||| |||||||| ||||| ||||| | Sbjct: 32421 cacccaatttgactgctatggttggggagcttgttggtgctcgcctcattgcccatggcg 32480 Query: 541 gtag 544 |||| Sbjct: 32481 gtag 32484
>gb|AY096684.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1633 Score = 107 bits (54), Expect = 4e-20 Identities = 172/212 (81%) Strand = Plus / Plus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || || || Sbjct: 364 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttatct 423 Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 |||||| | | || ||||| || |||||||| | || ||||| ||||| ||||| || Sbjct: 424 cacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgataatc 483 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 484 caagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagggtt 543 Query: 183 cgngaatggtacggttggcactttcccgagct 214 || ||||||| |||||||| ||||| ||||| Sbjct: 544 cgtgaatggtttggttggcattttcctgagct 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/161 (78%) Strand = Plus / Plus Query: 294 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 353 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 655 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 714 Query: 354 tccatgggaacagaagtcaatgagcttgacctctcgaacatcanggaactgtgtgatcaa 413 || |||||||| ||||||| ||| ||||| | | | ||||| ||||| ||||| || Sbjct: 715 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 774 Query: 414 gtcctggctctttctgagtacagagcccagctctatgacta 454 || || ||||| | ||||||||||| ||||| |||||||| Sbjct: 775 gttctttctcttgccgagtacagagctcagctttatgacta 815
>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence Length = 146189 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/106 (84%) Strand = Plus / Plus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||| |||||||||||| |||| || ||||| ||| | ||||||||||| || ||||| | Sbjct: 126457 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 126516 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcc 208 |||| ||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 126517 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 126562 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 432 tacagagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttg 491 |||||||| || |||||||| ||||| || ||||||||||| |||||||| || || ||| Sbjct: 127021 tacagagctcaactctatgattatctcaagagtaggatgaacaccattgcacccaatttg 127080 Query: 492 actgcacttgttggtgaacttgttggcgctcgccttattgcacatgg 538 ||||| | ||||| || |||||||| ||||| || ||||| ||||| Sbjct: 127081 actgctatggttggggagcttgttggtgctcgactcattgcccatgg 127127
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/106 (84%) Strand = Plus / Minus Query: 103 aggttgatactatgatcattcangcaattggcttgttggatgatcttgacaaggagctta 162 |||| |||||||||||| |||| || ||||| ||| | ||||||||||| || ||||| | Sbjct: 115311 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 115252 Query: 163 acacttatgctatgagggtccgngaatggtacggttggcactttcc 208 |||| ||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 115251 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 115206 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 432 tacagagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttg 491 |||||||| || |||||||| ||||| || ||||||||||| |||||||| || || ||| Sbjct: 114747 tacagagctcaactctatgattatctcaagagtaggatgaacaccattgcacccaatttg 114688 Query: 492 actgcacttgttggtgaacttgttggcgctcgccttattgcacatgg 538 ||||| | ||||| || |||||||| ||||| || ||||| ||||| Sbjct: 114687 actgctatggttggggagcttgttggtgctcgactcattgcccatgg 114641
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 421 ctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaataccattg 480 ||||||| || || ||||| || |||||||| ||||| || ||||||||||| |||||| Sbjct: 41096 ctctttcagaatatagagctcaactctatgattatctgaagagtaggatgaactccattg 41037 Query: 481 ctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacatggtg 540 | || || |||||||| |||||||| || |||||||| || ||||| ||||| ||||||| Sbjct: 41036 cacccaatttgactgctcttgttggggagcttgttggtgcccgcctcattgcccatggtg 40977 Query: 541 gtagtttgatgaatctggc 559 | || || || |||||||| Sbjct: 40976 gcagcttaataaatctggc 40958 Score = 63.9 bits (32), Expect = 5e-07 Identities = 115/143 (80%) Strand = Plus / Minus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 ||||||||||| |||||| | || || || || |||||||| || |||||||| |||||| Sbjct: 41646 gatgatcttgataaggagttgaatacatacgccatgagggttcgagaatggtatggttgg 41587 Query: 201 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 260 || ||||| ||||| || ||||| || ||||| ||||| |||||||| || || || Sbjct: 41586 cattttccagagcttaccaaaatcattcaggataacatccaatatgctaaggcagtcaaa 41527 Query: 261 atgatgggcaatcgtgttaatgc 283 ||||||| ||||||||||||| Sbjct: 41526 ttgatgggtgatcgtgttaatgc 41504
>gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04 Length = 90019 Score = 85.7 bits (43), Expect = 1e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||| |||||||||||||| ||||||||||| || ||||||| |||||| Sbjct: 80028 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 79969 Query: 201 cactttcccgagct 214 || ||||| ||||| Sbjct: 79968 cattttcctgagct 79955 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||| |||||||||||||| ||| ||| || | |||| |||||||| | Sbjct: 73003 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 72944 Query: 201 cactttcccgagct 214 || ||||||||||| Sbjct: 72943 cattttcccgagct 72930 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 3 actgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcc 62 ||||||||||| |||||| | | ||| || |||||||||||||||||| | || ||||| Sbjct: 80360 actgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttgtct 80301 Query: 63 cacagc 68 |||||| Sbjct: 80300 cacagc 80295
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 83.8 bits (42), Expect = 6e-13 Identities = 176/221 (79%) Strand = Plus / Minus Query: 327 gcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctc 386 ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | ||| | Sbjct: 10315 gcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgacttagacttg 10256 Query: 387 tcgaacatcanggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctc 446 | | ||||| ||||| ||||| || || || ||||||||||||||||||| ||||| Sbjct: 10255 ttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagctcagctt 10196 Query: 447 tatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggt 506 || || || ||||| || || ||||| || |||||||| || ||||||| || || || Sbjct: 10195 tacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctggtagga 10136 Query: 507 gaacttgttggcgctcgccttattgcacatggtggtagttt 547 || |||||||| ||||| |||||| | ||||| |||||||| Sbjct: 10135 gagcttgttggtgctcgtcttatttcccatggaggtagttt 10095 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 10594 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 10535 Query: 201 cactttcccgagct 214 || ||||||||||| Sbjct: 10534 cattttcccgagct 10521
>ref|NM_122596.1| Arabidopsis thaliana DNA binding AT5G27140 mRNA, complete cds Length = 1338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||| |||||||||||||| ||| ||| || | |||| |||||||| | Sbjct: 412 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 471 Query: 201 cactttcccgagct 214 || ||||||||||| Sbjct: 472 cattttcccgagct 485
>ref|XM_370511.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG07008.4) partial mRNA Length = 1878 Score = 60.0 bits (30), Expect = 8e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggt 197 ||||||||||||||||||||||| ||||| || |||||| | ||| || |||||||| Sbjct: 520 ttggatgatcttgacaaggagctgaacacgtacgctatgcgcgtcaaggagtggtacggc 579 Query: 198 tggcactttcccgagct 214 |||||||| || ||||| Sbjct: 580 tggcacttccctgagct 596
>ref|XM_968327.1| PREDICTED: Tribolium castaneum similar to CG10206-PA (LOC662214), mRNA Length = 1766 Score = 60.0 bits (30), Expect = 8e-06 Identities = 32/33 (96%) Strand = Plus / Plus Query: 182 ccgngaatggtacggttggcactttcccgagct 214 ||| ||||||||||||||||||||||||||||| Sbjct: 647 ccgcgaatggtacggttggcactttcccgagct 679
>gb|AF061963.1|AF061963 Pisum sativum SAR DNA-binding protein (SARBP-2) mRNA, complete cds Length = 1953 Score = 60.0 bits (30), Expect = 8e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 399 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 458 ||||| |||||||| || || ||||||| || ||||| || || |||||||| ||||| Sbjct: 881 gaactctgtgatcaggttttgtctctttcagaatacagggcacaactctatgattatctc 940 Query: 459 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 518 || ||||||||||| ||||| || || || |||||||| | ||||| || ||||| || Sbjct: 941 aagagtaggatgaacaccatagcgcccaatttgactgctatggttggggagcttgtcggt 1000 Query: 519 gctcgccttattgcacatggtggtag 544 ||||| || ||||| || |||||||| Sbjct: 1001 gctcgtctcattgcccacggtggtag 1026 Score = 52.0 bits (26), Expect = 0.002 Identities = 90/112 (80%) Strand = Plus / Plus Query: 97 ctgaaaaggttgatactatgatcattcangcaattggcttgttggatgatcttgacaagg 156 |||| ||||| |||||||||||| | || || ||||| || | ||||||||||| || | Sbjct: 579 ctgacaaggtggatactatgatcgtccaagctattggtttactcgatgatcttgataaag 638 Query: 157 agcttaacacttatgctatgagggtccgngaatggtacggttggcactttcc 208 | || ||||| ||||| ||||| || || || ||||| |||||||| ||||| Sbjct: 639 aactgaacacctatgccatgagagttcgtgagtggtatggttggcattttcc 690
>ref|XM_421942.1| PREDICTED: Gallus gallus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120) (LOC424087), mRNA Length = 1947 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 186 gaatggtacggttggcactttcccgagct 214 ||||||||||||||||||||||||||||| Sbjct: 635 gaatggtacggttggcactttcccgagct 663 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 atttccatgggaacagaagt 370 |||||||||||||||||||| Sbjct: 800 atttccatgggaacagaagt 819
>gb|AY950659.1| Euglena gracilis Nop58p mRNA, partial cds Length = 1232 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggt 181 |||||| | ||||||||||| |||||||||||||||||||| Sbjct: 458 gatgatttggacaaggagctcaacacttatgctatgagggt 498
>emb|BX935105.1| Gallus gallus finished cDNA, clone ChEST73m23 Length = 1953 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 186 gaatggtacggttggcactttcccgagct 214 ||||||||||||||||||||||||||||| Sbjct: 636 gaatggtacggttggcactttcccgagct 664 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 atttccatgggaacagaagt 370 |||||||||||||||||||| Sbjct: 801 atttccatgggaacagaagt 820
>ref|XM_815190.1| Trypanosoma cruzi strain CL Brener nucleolar RNA binding protein (Tc00.1047053508277.230) partial mRNA Length = 1491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 144 gatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcac 203 ||||||||||||||| |||||| || || ||| ||| ||| || |||||||| ||||| Sbjct: 643 gatcttgacaaggagattaacaaatacgcgatgcgggcccgagagtggtacggatggcat 702 Query: 204 tttcccgagct 214 ||||||||||| Sbjct: 703 tttcccgagct 713
>ref|XM_757287.1| Ustilago maydis 521 hypothetical protein (UM06233.1) partial mRNA Length = 1572 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/66 (84%) Strand = Plus / Plus Query: 146 tcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcactt 205 |||||||||||| ||||||||| | | ||| | || || ||||||||||| |||||||| Sbjct: 540 tcttgacaaggacgttaacactttttccatgcgtgttcgcgaatggtacggctggcactt 599 Query: 206 tcccga 211 |||||| Sbjct: 600 tcccga 605
>ref|XM_753615.1| Ustilago maydis 521 hypothetical protein (UM02561.1) partial mRNA Length = 1749 Score = 52.0 bits (26), Expect = 0.002 Identities = 105/132 (79%) Strand = Plus / Plus Query: 81 aagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttgttg 140 ||||| ||||| |||||||| ||||| || || ||| || | || || |||||| || | Sbjct: 481 aagctcaagtttagccctgacaaggtcgacaccatggtcgtacaagcgattggcctgctc 540 Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 || || || ||||||||| | |||| |||||||||| | ||| ||||||||||| ||| Sbjct: 541 gacgacctcgacaaggagatcaacatttatgctatgcgtgtcaaggaatggtacggctgg 600 Query: 201 cactttcccgag 212 ||||| |||||| Sbjct: 601 cacttccccgag 612
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 475 ccattgctcctaacttgactgcacttgttggtgaacttgttggcgc 520 ||||||| |||||||||||||| |||||||| ||| | |||||||| Sbjct: 2045652 ccattgcgcctaacttgactgctcttgttggcgaattggttggcgc 2045607 Score = 44.1 bits (22), Expect = 0.49 Identities = 107/136 (78%) Strand = Plus / Minus Query: 79 ataagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttgt 138 |||||||||||||| || || ||| ||||||||||||| | || || ||||| || Sbjct: 2046048 ataagctgaagttctctcccgataagattgatactatgattgtacaagccattggtctgc 2045989 Query: 139 tggatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggtt 198 |||||||| | || |||||||| |||| ||||||||| | || ||||||||||| | Sbjct: 2045988 tggatgatttggataaggagctcaacaactatgctatgcgtgtgaaggaatggtacggct 2045929 Query: 199 ggcactttcccgagct 214 ||||||| || ||||| Sbjct: 2045928 ggcacttccctgagct 2045913
>ref|NM_058064.3| Drosophila melanogaster nop5 CG10206-RA (nop5), mRNA Length = 1815 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 689 tggtacggttggcactttcccgagct 714
>gb|AY061401.1| Drosophila melanogaster LD32943 full length cDNA Length = 1810 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 669 tggtacggttggcactttcccgagct 694
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 54771 tggtacggttggcactttcccgagct 54796
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 24915 tggtacggttggcactttcccgagct 24890
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 161409 tggtacggttggcactttcccgagct 161384
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 12847 tggtacggttggcactttcccgagct 12872
>emb|AJ249465.1|DME249465 Drosophila melanogaster mRNA for DNop5 protein (Dnop5 gene) Length = 1817 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||||||||| Sbjct: 677 tggtacggttggcactttcccgagct 702
>ref|XM_749189.1| Aspergillus fumigatus Af293 nucleolar protein nop5 (Afu3g13400) partial mRNA Length = 1776 Score = 50.1 bits (25), Expect = 0.008 Identities = 107/135 (79%) Strand = Plus / Plus Query: 81 aagctgaagttcagccctgaaaaggttgatactatgatcattcangcaattggcttgttg 140 |||||||||||| ||| || ||| | ||||||||||| | || || ||||| ||| || Sbjct: 457 aagctgaagttctcccccgataagatcgatactatgattgtgcaagctattggtttgctg 516 Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 ||||| || ||||||||||| ||||| || || ||| | || ||||||||||| ||| Sbjct: 517 gatgacctggacaaggagctcaacacctacgccatgcgtgtgaaggaatggtacggctgg 576 Query: 201 cactttcccgagctc 215 || || ||||||||| Sbjct: 577 catttccccgagctc 591
>ref|NM_058733.3| Caenorhabditis elegans W01B11.3 (W01B11.3) mRNA, complete cds Length = 1788 Score = 48.1 bits (24), Expect = 0.031 Identities = 62/75 (82%) Strand = Plus / Plus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 510 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 569 Query: 201 cactttcccgagctc 215 || || || |||||| Sbjct: 570 catttcccagagctc 584
>gb|AF043704.1| Caenorhabditis elegans cosmid W01B11, complete sequence Length = 36999 Score = 48.1 bits (24), Expect = 0.031 Identities = 62/75 (82%) Strand = Plus / Plus Query: 141 gatgatcttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttgg 200 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 1904 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 1963 Query: 201 cactttcccgagctc 215 || || || |||||| Sbjct: 1964 catttcccagagctc 1978
>ref|XM_368011.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07915.4) partial mRNA Length = 1545 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 186 gaatggtacggttggcactttcccgagctca 216 ||||||||||| |||||||| |||||||||| Sbjct: 598 gaatggtacggctggcacttccccgagctca 628
>ref|XM_322653.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 46.1 bits (23), Expect = 0.12 Identities = 55/66 (83%) Strand = Plus / Plus Query: 147 cttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcacttt 206 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 207 cccgag 212 |||||| Sbjct: 583 cccgag 588
>ref|XM_951750.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 46.1 bits (23), Expect = 0.12 Identities = 55/66 (83%) Strand = Plus / Plus Query: 147 cttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcacttt 206 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 207 cccgag 212 |||||| Sbjct: 583 cccgag 588
>emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II BAC clone B19C19 Length = 61082 Score = 46.1 bits (23), Expect = 0.12 Identities = 55/66 (83%) Strand = Plus / Plus Query: 147 cttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcacttt 206 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 13989 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 14048 Query: 207 cccgag 212 |||||| Sbjct: 14049 cccgag 14054
>gb|U36470.1|NCU36470 Neurospora crassa vacuolar ATPase 41 kDa subunit (vma6) gene, ribosome-associated protein (rap-1) gene, complete cds Length = 6119 Score = 46.1 bits (23), Expect = 0.12 Identities = 55/66 (83%) Strand = Plus / Minus Query: 147 cttgacaaggagcttaacacttatgctatgagggtccgngaatggtacggttggcacttt 206 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 78 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 19 Query: 207 cccgag 212 |||||| Sbjct: 18 cccgag 13
>gb|BC059982.1| Xenopus laevis hypothetical protein MGC68668, mRNA (cDNA clone MGC:68668 IMAGE:4032881), complete cds Length = 3359 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 311 accagaagaagtggaagcagag 332 |||||||||||||||||||||| Sbjct: 808 accagaagaagtggaagcagag 829
>ref|XM_947073.1| Theileria annulata strain Ankara nucleolar protein Nop5 (TA13805) partial mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcccgagct 214 |||||||||||||||||||| ||||| Sbjct: 565 tggtacggttggcactttccagagct 590
>gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185930 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 actgcacttgttggtgaacttg 513 |||||||||||||||||||||| Sbjct: 147850 actgcacttgttggtgaacttg 147829
>emb|AL163192.6|HS298E2 Homo sapiens chromosome 9 BAC RP11-298E2, complete sequence Length = 140741 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 337 aggaggcagctgtaatttccatggga 362 ||||||||||||||||||||| |||| Sbjct: 79352 aggaggcagctgtaatttccagggga 79327
>gb|BC079930.1| Xenopus tropicalis MGC79534 protein, mRNA (cDNA clone MGC:79534 IMAGE:6977964), complete cds Length = 2290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 agttcagccctgaaaaggttg 108 ||||||||||||||||||||| Sbjct: 1050 agttcagccctgaaaaggttg 1070
>gb|DQ271447.1| Mustela vison clone IX1F7 microsatellite sequence Length = 380 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 tctgagtacagagcccagctc 446 ||||||||||||||||||||| Sbjct: 155 tctgagtacagagcccagctc 135
>ref|NM_001007493.1| Xenopus tropicalis MGC79534 protein (MGC79534), mRNA Length = 2290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 agttcagccctgaaaaggttg 108 ||||||||||||||||||||| Sbjct: 1050 agttcagccctgaaaaggttg 1070
>gb|DQ124215.2| Dunaliella salina MAR-binding protein mRNA, complete cds Length = 2232 Score = 42.1 bits (21), Expect = 1.9 Identities = 112/143 (78%) Strand = Plus / Plus Query: 63 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 122 ||||||||||| | || ||||| ||||||||||| || ||||| || || ||||| | Sbjct: 532 cacagcttgtcgcgatacaagctcaagttcagcccagacaaggtcgacaccatgattgtg 591 Query: 123 cangcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 182 || || ||||| || |||| || || ||||||||||| ||||| ||||| ||| | || Sbjct: 592 caagccattgggctgctggacgacctggacaaggagctgaacacgtatgccatgcgtgtg 651 Query: 183 cgngaatggtacggttggcactt 205 || || ||||| || |||||||| Sbjct: 652 cgtgagtggtatggctggcactt 674
>emb|CR762290.2| Xenopus tropicalis finished cDNA, clone TGas091m21 Length = 2230 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 agttcagccctgaaaaggttg 108 ||||||||||||||||||||| Sbjct: 1007 agttcagccctgaaaaggttg 1027
>emb|AL844900.3| Mouse DNA sequence from clone RP23-301L16 on chromosome X, complete sequence Length = 183256 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 ctgcacttgttggtgaacttg 513 ||||||||||||||||||||| Sbjct: 31012 ctgcacttgttggtgaacttg 31032
>ref|NM_001031125.1| Gallus gallus septin 6 (SEPT6), mRNA Length = 2443 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaagcagagctgaaggaggc 343 |||||||||||||||||||| Sbjct: 1096 gaagcagagctgaaggaggc 1115
>ref|XM_991232.1| PREDICTED: Mus musculus Max protein (Max), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 actgtgtgatcaagtcctggctct 424 ||||||||||| |||||||||||| Sbjct: 1628 actgtgtgatccagtcctggctct 1651
>ref|XM_001002021.1| PREDICTED: Mus musculus Max protein (Max), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 actgtgtgatcaagtcctggctct 424 ||||||||||| |||||||||||| Sbjct: 1628 actgtgtgatccagtcctggctct 1651
>ref|XM_444941.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04015g) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gaatggtacggttggcactt 205 |||||||||||||||||||| Sbjct: 583 gaatggtacggttggcactt 602
>gb|AC124556.4| Mus musculus BAC clone RP23-246K11 from chromosome 12, complete sequence Length = 202214 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 actgtgtgatcaagtcctggctct 424 ||||||||||| |||||||||||| Sbjct: 76752 actgtgtgatccagtcctggctct 76775
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcagtgaaccttgacttctc 301 |||||||||||||||||||| Sbjct: 78934 gcagtgaaccttgacttctc 78953
>emb|AL359962.15| Human DNA sequence from clone RP11-104L21 on chromosome 1q23.3-25.1 Contains the 3' end of the POU2F1 gene for POU domain class 2 transcription factor 1, the 3' end of the CD3Z gene for CD3Z antigen zeta polypeptide (TiT3 complex) and two CpG islands, complete sequence Length = 67173 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ctgaagttcagccctgaaaa 103 |||||||||||||||||||| Sbjct: 25164 ctgaagttcagccctgaaaa 25145
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gaatggtacggttggcactt 205 |||||||||||||||||||| Sbjct: 398322 gaatggtacggttggcactt 398303
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 taacttgactgcacttgttg 504 |||||||||||||||||||| Sbjct: 87282 taacttgactgcacttgttg 87301
>emb|CR387927.9| Zebrafish DNA sequence from clone CH211-260P11 in linkage group 14, complete sequence Length = 149672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 aaggaggcagctgtaatttc 355 |||||||||||||||||||| Sbjct: 31014 aaggaggcagctgtaatttc 30995
>emb|AJ719542.1| Gallus gallus mRNA for hypothetical protein, clone 3d14 Length = 2443 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaagcagagctgaaggaggc 343 |||||||||||||||||||| Sbjct: 1096 gaagcagagctgaaggaggc 1115
>dbj|AB220397.1| Macaca fascicularis mRNA, clone QccE-11793: similar to Homo sapiens MAP/microtubule affinity-regulating kinase 4 (MARK4), mRNA, NM_002375.3 Length = 2318 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ggaagcagagctgaaggagg 342 |||||||||||||||||||| Sbjct: 330 ggaagcagagctgaaggagg 349
>dbj|AK080431.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730011M08 product:Max protein, full insert sequence Length = 1928 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 actgtgtgatcaagtcctggctct 424 ||||||||||| |||||||||||| Sbjct: 1668 actgtgtgatccagtcctggctct 1691
>gb|DQ072717.1| Homo sapiens CD3Z antigen, zeta polypeptide (TiT3 complex) (CD3Z) gene, complete cds Length = 90859 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctgaagttcagccctgaaaa 103 |||||||||||||||||||| Sbjct: 77261 ctgaagttcagccctgaaaa 77280
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 taacttgactgcacttgttg 504 |||||||||||||||||||| Sbjct: 19305450 taacttgactgcacttgttg 19305469
>gb|AF549772.1| Leucania inermis cytochrome c oxidase I subunit (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 617 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tattgcacatggtggtagtt 546 |||||||||||||||||||| Sbjct: 317 tattgcacatggtggtagtt 336
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 taaagctgtgaagatgatgg 267 |||||||||||||||||||| Sbjct: 143756 taaagctgtgaagatgatgg 143775
>gb|AF203894.1| Laurencia filiformis small subunit ribosomal RNA gene, complete sequence Length = 1766 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tggtacggttggcactttcc 208 |||||||||||||||||||| Sbjct: 1031 tggtacggttggcactttcc 1050
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gaggcagctgtaatttccat 358 |||||||||||||||||||| Sbjct: 1331804 gaggcagctgtaatttccat 1331785
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcagtgaaccttgacttctc 301 |||||||||||||||||||| Sbjct: 221436 gcagtgaaccttgacttctc 221455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,280,500 Number of Sequences: 3902068 Number of extensions: 4280500 Number of successful extensions: 78227 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 77997 Number of HSP's gapped (non-prelim): 217 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
