ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15p24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 797 bits (402), Expect = 0.0 Identities = 472/493 (95%), Gaps = 3/493 (0%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1080 tgaggaaggtattgttgttggtggagggtgcacccttttgaggctggctgctaaggttga 1139 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 1199 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1200 ggcactgtgctacccactcaagttgatcgccaagaatgccggtgtcaatggcagtgttgt 1259 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1260 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgctgccactgggca 1319 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1320 gtacgaggacttgatggctgctggtatcatcgaccccaccaaggtggtgagatgttgcct 1379 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1380 ggagcacgccgcatcggtggccaagaccttcctgacgtccgacgtggtggtcgtcgagat 1439 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1440 caaggagcctgaggccgcgcccctcgccaaccccatggacaactccggcttcggatactg 1499 Query: 422 atgagcgac--ggtggagtctctccagaggatgtggtttaatttttggtagcatgaacca 479 ||||| ||| || |||| ||||| || || ||||||||| ||||||||||||| |||| Sbjct: 1500 atgagtgacatggccgagtttctccggatgacgtggtttaa-ttttggtagcatggacca 1558 Query: 480 agttttgagagat 492 ||||||||||||| Sbjct: 1559 agttttgagagat 1571 Score = 157 bits (79), Expect = 6e-35 Identities = 99/103 (96%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 526 aaaatgcaatgtgatgtgcctgccagaacggcgaaataagcagagaaacatttagcggaa 585 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1607 aaaatgcaatgtgatgtgcc-gccagaacggcgaaataagcagagaaacatttagcggaa 1665 Query: 586 atttctttgatgtaattggaacagcttacggctctcgttttac 628 ||||| ||||||||||||||||||| ||||||||| ||||||| Sbjct: 1666 atttc-ttgatgtaattggaacagcatacggctcttgttttac 1707
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 452 bits (228), Expect = e-124 Identities = 375/424 (88%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 1475 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 1534 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 ||||||||||||| ||||||||| || ||||||||||| |||||||| || || ||||| Sbjct: 1535 cgccatcaaggacaacctggagaatgatgagcagaaggttggagctgaaattgtaaggag 1594 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 |||||| ||||||| || || ||||| || |||||||||||||| ||||| || ||||| Sbjct: 1595 agcgctgagctacccgcttaaattgattgctaagaatgctggtgttaatggaagcgttgt 1654 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||||||||||||||| |||||||| ||||||||||| || ||||| || || ||||| || Sbjct: 1655 taccgagaaggttctctctaacgataacttcaagtttggttacaatgctgcaactggaca 1714 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1715 gtacgaggatttgatggctgctggtatcattgaccccactaaggtggtgagatgttgtct 1774 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||||| ||||||||||||||||| ||||| || ||||| || || ||||||||||| Sbjct: 1775 tgagcatgctgcgtcggtggccaagacattcctcacatcggatgtcgtcgtcgtcgagat 1834 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||||||||| |||||| || |||||| |||||||||||||||| ||| ||||| Sbjct: 1835 caaggagcctgagcctgcgcccgtcaccaacccgatggacaactccggctacgggtactg 1894 Query: 422 atga 425 |||| Sbjct: 1895 atga 1898
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 452 bits (228), Expect = e-124 Identities = 375/424 (88%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 1475 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 1534 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 ||||||||||||| ||||||||| || ||||||||||| |||||||| || || ||||| Sbjct: 1535 cgccatcaaggacaacctggagaatgatgagcagaaggttggagctgaaattgtaaggag 1594 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 |||||| ||||||| || || ||||| || |||||||||||||| ||||| || ||||| Sbjct: 1595 agcgctgagctacccgcttaaattgattgctaagaatgctggtgttaatggaagcgttgt 1654 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||||||||||||||| |||||||| ||||||||||| || ||||| || || ||||| || Sbjct: 1655 taccgagaaggttctctctaacgataacttcaagtttggttacaatgctgcaactggaca 1714 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1715 gtacgaggatttgatggctgctggtatcattgaccccactaaggtggtgagatgttgtct 1774 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||||| ||||||||||||||||| ||||| || ||||| || || ||||||||||| Sbjct: 1775 tgagcatgctgcgtcggtggccaagacattcctcacatcggatgtcgtcgtcgtcgagat 1834 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||||||||| |||||| || |||||| |||||||||||||||| ||| ||||| Sbjct: 1835 caaggagcctgagcctgcgcccgtcaccaacccgatggacaactccggctacgggtactg 1894 Query: 422 atga 425 |||| Sbjct: 1895 atga 1898
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 452 bits (228), Expect = e-124 Identities = 375/424 (88%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 1143 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 1202 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 ||||||||||||| ||||||||| || ||||||||||| |||||||| || || ||||| Sbjct: 1203 cgccatcaaggacaacctggagaatgatgagcagaaggttggagctgaaattgtaaggag 1262 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 |||||| ||||||| || || ||||| || |||||||||||||| ||||| || ||||| Sbjct: 1263 agcgctgagctacccgcttaaattgattgctaagaatgctggtgttaatggaagcgttgt 1322 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||||||||||||||| |||||||| ||||||||||| || ||||| || || ||||| || Sbjct: 1323 taccgagaaggttctctctaacgataacttcaagtttggttacaatgctgcaactggaca 1382 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1383 gtacgaggatttgatggctgctggtatcattgaccccactaaggtggtgagatgttgtct 1442 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||||| ||||||||||||||||| ||||| || ||||| || || ||||||||||| Sbjct: 1443 tgagcatgctgcgtcggtggccaagacattcctcacatcggatgtcgtcgtcgtcgagat 1502 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||||||||| |||||| || |||||| |||||||||||||||| ||| ||||| Sbjct: 1503 caaggagcctgagcctgcgcccgtcaccaacccgatggacaactccggctacgggtactg 1562 Query: 422 atga 425 |||| Sbjct: 1563 atga 1566
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 452 bits (228), Expect = e-124 Identities = 375/424 (88%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 469 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 528 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 ||||||||||||| ||||||||| || ||||||||||| |||||||| || || ||||| Sbjct: 529 cgccatcaaggacaacctggagaatgatgagcagaaggttggagctgaaattgtaaggag 588 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 |||||| ||||||| || || ||||| || |||||||||||||| ||||| || ||||| Sbjct: 589 agcgctgagctacccgcttaaattgattgctaagaatgctggtgttaatggaagcgttgt 648 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||||||||||||||| |||||||| ||||||||||| || ||||| || || ||||| || Sbjct: 649 taccgagaaggttctctctaacgataacttcaagtttggttacaatgctgcaactggaca 708 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 709 gtacgaggatttgatggctgctggtatcattgaccccactaaggtggtgagatgttgtct 768 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||||| ||||||||||||||||| ||||| || ||||| || || ||||||||||| Sbjct: 769 tgagcatgctgcgtcggtggccaagacattcctcacatcggatgtcgtcgtcgtcgagat 828 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||||||||| |||||| || |||||| |||||||||||||||| ||| ||||| Sbjct: 829 caaggagcctgagcctgcgcccgtcaccaacccgatggacaactccggctacgggtactg 888 Query: 422 atga 425 |||| Sbjct: 889 atga 892
>gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta subunit mRNA, partial cds Length = 1471 Score = 398 bits (201), Expect = e-108 Identities = 369/425 (86%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| |||||||||||||||||| |||| || ||||| || || Sbjct: 811 tgaggaaggtattgttgttgggggagggtgcactcttttgcggcttgcagctaaagtcga 870 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 ||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 871 cgccatcaaggatacactggagaacgacgagcagaaggttggagctgaaatagtgaggag 930 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 ||| ||| |||||||||| || ||||| || || || || |||||||||||||||||||| Sbjct: 931 ggccctgagctacccacttaaattgattgctaaaaacgccggtgtcaatggcagtgttgt 990 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 || |||||||| |||||||| || |||||||||| || ||||| || || ||||| || Sbjct: 991 cactgagaaggtcctttctaatgataacttcaagtatggttacaatgctgctactggaca 1050 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 |||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||| | Sbjct: 1051 gtacgaggacctgatggctgctggtatcattgaccccaccaaggtggtgagatgctgctt 1110 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||| ||||||||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 1111 ggagcacgccgcgtcggtggccaagaccttcctgacatcagatgttgtggtcgtcgatat 1170 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatactg 421 ||||||||| ||| | | || ||| ||||| ||||||||||| |||| |||||||| Sbjct: 1171 caaggagccggaggctacacctgtcgcaaacccgatggacaactctggctatggatactg 1230 Query: 422 atgag 426 ||||| Sbjct: 1231 atgag 1235
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 387 bits (195), Expect = e-104 Identities = 363/419 (86%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||| ||||| |||||| |||| || ||||| || || Sbjct: 1616 tgaggaaggtattgttgttggtggaggatgcacccttttgcggcttgcagctaaagtcga 1675 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 1676 tgccatcaaggatacactggagaacgatgagcagaaggttggagctgaaatagtaaggag 1735 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 ||| ||| |||||||||| || ||||| || || ||||| |||||||||||||| || || Sbjct: 1736 ggccctgagctacccacttaaattgattgctaaaaatgccggtgtcaatggcagcgtcgt 1795 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 || |||||||| ||||||||||| |||||||||| || ||||| || || ||||| || Sbjct: 1796 cactgagaaggtcctttctaacgataacttcaagtatggttacaatgctgctactggaca 1855 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 |||||||||||||||||||||||||||||| || || ||||||||||||||||| || | Sbjct: 1856 gtacgaggacttgatggctgctggtatcattgatcctactaaggtggtgagatgctgttt 1915 Query: 302 ggagcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagat 361 |||||||||||||||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 1916 ggagcatgccgcgtcggtggccaagaccttcctgacatctgatgttgtggtcgtcgatat 1975 Query: 362 caaggagcctgagcccgcgcccctcgtcaaccccatggacaactccggcttcggatact 420 |||||||| ||| | |||||||| | ||||| ||||||||||| |||| ||||||| Sbjct: 1976 taaggagccagagtctgcgccccttgctaacccgatggacaactctggctatggatact 2034
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 283 aggtggtgagatgttgcctggagcatgccgcgtcggtggccaagaccttcctgacgtcgg 342 |||||||||||||||| || |||||||| ||||||||||||||||| ||||| || |||| Sbjct: 810523 aggtggtgagatgttgtcttgagcatgctgcgtcggtggccaagacattcctcacatcgg 810464 Query: 343 acgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctcgtcaaccccatggaca 402 | || || |||||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 810463 atgtcgtcgtcgtcgagatcaaggagcctgagcctgcgcccgtcaccaacccgatggaca 810404 Query: 403 actccgg 409 ||||||| Sbjct: 810403 actccgg 810397 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 811506 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 811447 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggt 100 ||||||||||||| ||||||||| || ||||||||||| Sbjct: 811446 cgccatcaaggacaacctggagaatgatgagcagaaggt 811408 Score = 113 bits (57), Expect = 8e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 190 aggttctttctaacgacaacttcaagttcggctacaacgcagccactgggcagtacgagg 249 ||||||| |||||||| ||||||||||| || ||||| || || ||||| |||||||||| Sbjct: 811068 aggttctctctaacgataacttcaagtttggttacaatgctgcaactggacagtacgagg 811009 Query: 250 acttgatggctgctggtatcatcgaccccactaaggt 286 | |||||||||||||||||||| |||||||||||||| Sbjct: 811008 atttgatggctgctggtatcattgaccccactaaggt 810972 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 97 aggtcggagctgagatagtgaggagggcgctgtgctacccactcaagttgatcgccaaga 156 |||| |||||||| || || ||||| |||||| ||||||| || || ||||| || |||| Sbjct: 811238 aggttggagctgaaattgtaaggagagcgctgagctacccgcttaaattgattgctaaga 811179 Query: 157 atgctggtgtcaatggcagtgttgttaccgagaaggtt 194 |||||||||| ||||| || |||||||||||||||||| Sbjct: 811178 atgctggtgttaatggaagcgttgttaccgagaaggtt 811141 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 241 agtacgaggacttgatggctgctggtatcatcgaccccactaag 284 ||||||||||||| |||| |||||| | || |||||||||||| Sbjct: 806554 agtacgaggacttaatggttgctgggactattgaccccactaag 806511
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 283 aggtggtgagatgttgcctggagcatgccgcgtcggtggccaagaccttcctgacgtcgg 342 |||||||||||||||| || |||||||| ||||||||||||||||| ||||| || |||| Sbjct: 93657 aggtggtgagatgttgtcttgagcatgctgcgtcggtggccaagacattcctcacatcgg 93598 Query: 343 acgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctcgtcaaccccatggaca 402 | || || |||||||||||||||||||||||||| |||||| || |||||| ||||||| Sbjct: 93597 atgtcgtcgtcgtcgagatcaaggagcctgagcctgcgcccgtcaccaacccgatggaca 93538 Query: 403 actccgg 409 ||||||| Sbjct: 93537 actccgg 93531 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| Sbjct: 94640 tgaggaaggtattgttgttggtggagggtgcactcttctgagactggcagctagagttga 94581 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggt 100 ||||||||||||| ||||||||| || ||||||||||| Sbjct: 94580 cgccatcaaggacaacctggagaatgatgagcagaaggt 94542 Score = 113 bits (57), Expect = 8e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 190 aggttctttctaacgacaacttcaagttcggctacaacgcagccactgggcagtacgagg 249 ||||||| |||||||| ||||||||||| || ||||| || || ||||| |||||||||| Sbjct: 94202 aggttctctctaacgataacttcaagtttggttacaatgctgcaactggacagtacgagg 94143 Query: 250 acttgatggctgctggtatcatcgaccccactaaggt 286 | |||||||||||||||||||| |||||||||||||| Sbjct: 94142 atttgatggctgctggtatcattgaccccactaaggt 94106 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 97 aggtcggagctgagatagtgaggagggcgctgtgctacccactcaagttgatcgccaaga 156 |||| |||||||| || || ||||| |||||| ||||||| || || ||||| || |||| Sbjct: 94372 aggttggagctgaaattgtaaggagagcgctgagctacccgcttaaattgattgctaaga 94313 Query: 157 atgctggtgtcaatggcagtgttgttaccgagaaggtt 194 |||||||||| ||||| || |||||||||||||||||| Sbjct: 94312 atgctggtgttaatggaagcgttgttaccgagaaggtt 94275 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 241 agtacgaggacttgatggctgctggtatcatcgaccccactaag 284 ||||||||||||| |||| |||||| | || |||||||||||| Sbjct: 89688 agtacgaggacttaatggttgctgggactattgaccccactaag 89645
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 139 bits (70), Expect = 1e-29 Identities = 265/330 (80%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttgat 62 ||||||||||| ||||| ||||| || || || ||||||||||| || | || |||||| Sbjct: 1463 gaggaaggtatcgttgtaggtggtggctgtacccttttgaggcttgcatcaaaagttgat 1522 Query: 63 gccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggagg 122 || || | || ||||| |||||||| || |||||||| || ||||| || || |||| | Sbjct: 1523 gcaattatagagacccttgagaacgatgaacagaaggttggggctgaaattgtaaggaag 1582 Query: 123 gcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgtt 182 | || |||| ||||| || ||||| || || ||||| || || ||||||||||| ||| Sbjct: 1583 tccttgagctatccacttaaattgattgcaaaaaatgcaggcgttaatggcagtgtggtt 1642 Query: 183 accgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggcag 242 || |||||||||||| | || || ||||||| || || ||||| || || || ||| || Sbjct: 1643 actgagaaggttcttgccaatgagaacttcaggtatgggtacaatgcggctacaggggag 1702 Query: 243 tacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctg 302 || |||||||||||||||||||||||||| || ||||| ||||| ||||| || ||| || Sbjct: 1703 tatgaggacttgatggctgctggtatcattgatcccaccaaggttgtgaggtgctgcttg 1762 Query: 303 gagcatgccgcgtcggtggccaagaccttc 332 |||||||| || |||||||| || |||||| Sbjct: 1763 gagcatgctgcatcggtggcgaaaaccttc 1792
>gb|BT018139.1| Zea mays clone EL01N0554H01.c mRNA sequence Length = 975 Score = 139 bits (70), Expect = 1e-29 Identities = 265/330 (80%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttgat 62 ||||||||||| ||||| ||||| || || || ||||||||||| || | || |||||| Sbjct: 258 gaggaaggtatcgttgtaggtggtggctgtacccttttgaggcttgcatcaaaagttgat 317 Query: 63 gccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggagg 122 || || | || ||||| |||||||| || |||||||| || ||||| || || |||| | Sbjct: 318 gcaattatagagacccttgagaacgatgaacagaaggttggggctgaaattgtaaggaag 377 Query: 123 gcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgtt 182 | || |||| ||||| || ||||| || || ||||| || || ||||||||||| ||| Sbjct: 378 tccttgagctatccacttaaattgattgcaaaaaatgcaggcgttaatggcagtgtggtt 437 Query: 183 accgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggcag 242 || |||||||||||| | || || ||||||| || || ||||| || || || ||| || Sbjct: 438 actgagaaggttcttgccaatgagaacttcaggtatgggtacaatgcggctacaggggag 497 Query: 243 tacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctg 302 || |||||||||||||||||||||||||| || ||||| ||||| ||||| || ||| || Sbjct: 498 tatgaggacttgatggctgctggtatcattgatcccaccaaggttgtgaggtgctgcttg 557 Query: 303 gagcatgccgcgtcggtggccaagaccttc 332 |||||||| || |||||||| || |||||| Sbjct: 558 gagcatgctgcatcggtggcgaaaaccttc 587
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 139 bits (70), Expect = 1e-29 Identities = 265/330 (80%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttgat 62 ||||||||||| ||||| ||||| || || || ||||||||||| || | || |||||| Sbjct: 1591 gaggaaggtatcgttgtaggtggtggctgtacccttttgaggcttgcatcaaaagttgat 1650 Query: 63 gccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggagg 122 || || | || ||||| |||||||| || |||||||| || ||||| || || |||| | Sbjct: 1651 gcaattatagagacccttgagaacgatgaacagaaggttggggctgaaattgtaaggaag 1710 Query: 123 gcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgtt 182 | || |||| ||||| || ||||| || || ||||| || || ||||||||||| ||| Sbjct: 1711 tccttgagctatccacttaaattgattgcaaaaaatgcaggcgttaatggcagtgtggtt 1770 Query: 183 accgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggcag 242 || |||||||||||| | || || ||||||| || || ||||| || || || ||| || Sbjct: 1771 actgagaaggttcttgccaatgagaacttcaggtatgggtacaatgcggctacaggggag 1830 Query: 243 tacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctg 302 || |||||||||||||||||||||||||| || ||||| ||||| ||||| || ||| || Sbjct: 1831 tatgaggacttgatggctgctggtatcattgatcccaccaaggttgtgaggtgctgcttg 1890 Query: 303 gagcatgccgcgtcggtggccaagaccttc 332 |||||||| || |||||||| || |||||| Sbjct: 1891 gagcatgctgcatcggtggcgaaaaccttc 1920
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacgac 206 |||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||| Sbjct: 1631 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggtgctttccaacgat 1690 Query: 207 aacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctggt 266 ||| | || ||||| ||||| || || || || |||||||||| ||||||||||| || Sbjct: 1691 aacgtgaaattcggttacaatgctgcaaccggcaagtacgaggatttgatggctgcagga 1750 Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||| || || ||||| |||||||||||| |||| || || || ||||| || ||| Sbjct: 1751 atcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggttgcaaag 1810 Query: 327 accttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctc 386 || ||| ||| ||||||| || || || ||||||||||| ||||| || | ||| || Sbjct: 1811 actttcttgatgtcggactgcgttgttgttgagatcaaggaacctgaaccagttcccgtc 1870 Query: 387 gtcaaccccatggacaactc 406 | |||||| ||||||||||| Sbjct: 1871 ggcaacccaatggacaactc 1890 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 1487 gaggaaggtattgttgttggtggtggttgcactct 1521
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacgac 206 |||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||| Sbjct: 1658 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggtgctttccaacgat 1717 Query: 207 aacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctggt 266 ||| | || ||||| ||||| || || || || |||||||||| ||||||||||| || Sbjct: 1718 aacgtgaaattcggttacaatgctgcaaccggcaagtacgaggatttgatggctgcagga 1777 Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||| || || ||||| |||||||||||| |||| || || || ||||| || ||| Sbjct: 1778 atcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggttgcaaag 1837 Query: 327 accttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctc 386 || ||| ||| ||||||| || || || ||||||||||| ||||| || | ||| || Sbjct: 1838 actttcttgatgtcggactgcgttgttgttgagatcaaggaacctgaaccagttcccgtc 1897 Query: 387 gtcaaccccatggacaactc 406 | |||||| ||||||||||| Sbjct: 1898 ggcaacccaatggacaactc 1917 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 1514 gaggaaggtattgttgttggtggtggttgcactct 1548
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacgac 206 |||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||| Sbjct: 1528 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggtgctttccaacgat 1587 Query: 207 aacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctggt 266 ||| | || ||||| ||||| || || || || |||||||||| ||||||||||| || Sbjct: 1588 aacgtgaaattcggttacaatgctgcaaccggcaagtacgaggatttgatggctgcagga 1647 Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||| || || ||||| |||||||||||| |||| || || || ||||| || ||| Sbjct: 1648 atcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggttgcaaag 1707 Query: 327 accttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctc 386 || ||| ||| ||||||| || || || ||||||||||| ||||| || | ||| || Sbjct: 1708 actttcttgatgtcggactgcgttgttgttgagatcaaggaacctgaaccagttcccgtc 1767 Query: 387 gtcaaccccatggacaactc 406 | |||||| ||||||||||| Sbjct: 1768 ggcaacccaatggacaactc 1787 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 1384 gaggaaggtattgttgttggtggtggttgcactct 1418
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacgac 206 |||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||| Sbjct: 1650 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggtgctttccaacgat 1709 Query: 207 aacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctggt 266 ||| | || ||||| ||||| || || || || |||||||||| ||||||||||| || Sbjct: 1710 aacgtgaaattcggttacaatgctgcaaccggcaagtacgaggatttgatggctgcagga 1769 Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||| || || ||||| |||||||||||| |||| || || || ||||| || ||| Sbjct: 1770 atcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggttgcaaag 1829 Query: 327 accttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctc 386 || ||| ||| ||||||| || || || ||||||||||| ||||| || | ||| || Sbjct: 1830 actttcttgatgtcggactgcgttgttgttgagatcaaggaacctgaaccagttcccgtc 1889 Query: 387 gtcaaccccatggacaactc 406 | |||||| ||||||||||| Sbjct: 1890 ggcaacccaatggacaactc 1909 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 1506 gaggaaggtattgttgttggtggtggttgcactct 1540
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 129 bits (65), Expect = 1e-26 Identities = 257/321 (80%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 1469 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 1528 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||| | || || || ||||| || || |||||||| || ||||| || || |||| Sbjct: 1529 tgccattatagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaa 1588 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 | | || | |||||||| || || || || || ||||||||||| || ||||||||||| Sbjct: 1589 gtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgt 1648 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||| |||||||| ||| | || || ||||||| || || ||||| || || || || | Sbjct: 1649 tactgagaaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaa 1708 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 || ||||| ||||||||||||||||| || || ||||| |||||||||||||||||| | Sbjct: 1709 atatgaggatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgctt 1768 Query: 302 ggagcatgccgcgtcggtggc 322 ||||||||| ||||||||||| Sbjct: 1769 ggagcatgctgcgtcggtggc 1789
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 129 bits (65), Expect = 1e-26 Identities = 257/321 (80%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 1489 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 1548 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||| | || || || ||||| || || |||||||| || ||||| || || |||| Sbjct: 1549 tgccattatagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaa 1608 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 | | || | |||||||| || || || || || ||||||||||| || ||||||||||| Sbjct: 1609 gtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgt 1668 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||| |||||||| ||| | || || ||||||| || || ||||| || || || || | Sbjct: 1669 tactgagaaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaa 1728 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 || ||||| ||||||||||||||||| || || ||||| |||||||||||||||||| | Sbjct: 1729 atatgaggatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgctt 1788 Query: 302 ggagcatgccgcgtcggtggc 322 ||||||||| ||||||||||| Sbjct: 1789 ggagcatgctgcgtcggtggc 1809
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 129 bits (65), Expect = 1e-26 Identities = 257/321 (80%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 1468 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 1527 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||| | || || || ||||| || || |||||||| || ||||| || || |||| Sbjct: 1528 tgccattatagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaa 1587 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 | | || | |||||||| || || || || || ||||||||||| || ||||||||||| Sbjct: 1588 gtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgt 1647 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||| |||||||| ||| | || || ||||||| || || ||||| || || || || | Sbjct: 1648 tactgagaaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaa 1707 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 || ||||| ||||||||||||||||| || || ||||| |||||||||||||||||| | Sbjct: 1708 atatgaggatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgctt 1767 Query: 302 ggagcatgccgcgtcggtggc 322 ||||||||| ||||||||||| Sbjct: 1768 ggagcatgctgcgtcggtggc 1788
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 129 bits (65), Expect = 1e-26 Identities = 257/321 (80%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 1489 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 1548 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||| | || || || ||||| || || |||||||| || ||||| || || |||| Sbjct: 1549 tgccattatagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaa 1608 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 | | || | |||||||| || || || || || ||||||||||| || ||||||||||| Sbjct: 1609 gtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgt 1668 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 ||| |||||||| ||| | || || ||||||| || || ||||| || || || || | Sbjct: 1669 tactgagaaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaa 1728 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 || ||||| ||||||||||||||||| || || ||||| |||||||||||||||||| | Sbjct: 1729 atatgaggatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgctt 1788 Query: 302 ggagcatgccgcgtcggtggc 322 ||||||||| ||||||||||| Sbjct: 1789 ggagcatgctgcgtcggtggc 1809
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 127 bits (64), Expect = 5e-26 Identities = 212/260 (81%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacgac 206 |||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||| Sbjct: 1613 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggtgctttccaacgat 1672 Query: 207 aacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctggt 266 ||| | || ||||| ||||| || || || || |||||||||| ||||||||||| || Sbjct: 1673 aacgtgaaattcggttacaatgctgcaaccggcaagtacgagga-ttgatggctgcagga 1731 Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||| || || ||||| |||||||||||| |||| || || || ||||| || ||| Sbjct: 1732 atcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggttgcaaag 1791 Query: 327 accttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctc 386 || ||| ||| ||||||| || || || ||||||||||| ||||| || | ||| || Sbjct: 1792 actttcttgatgtcggactgcgttgttgttgagatcaaggaacctgaaccagttcccgtc 1851 Query: 387 gtcaaccccatggacaactc 406 | |||||| ||||||||||| Sbjct: 1852 ggcaacccaatggacaactc 1871 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 1469 gaggaaggtattgttgttggtggtggttgcactct 1503
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 127 bits (64), Expect = 5e-26 Identities = 190/232 (81%) Strand = Plus / Plus Query: 145 tgatcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaacg 204 |||| ||||||||||| || |||||||| || || |||| ||||||||| |||||||||| Sbjct: 1589 tgattgccaagaatgcaggagtcaatggaagcgtagttagcgagaaggtgctttctaacg 1648 Query: 205 acaacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgctg 264 | || | |||||||| ||||| || || || || |||||||||| | |||||||| | Sbjct: 1649 ataatgtgaagttcggttacaatgctgcaaccggcaagtacgaggatctaatggctgcag 1708 Query: 265 gtatcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggcca 324 | |||||||| || |||||||| |||||||||||| |||| ||||| || ||||| || | Sbjct: 1709 gaatcatcgatccaactaaggttgtgagatgttgcttggaacatgcagcttcggttgcaa 1768 Query: 325 agaccttcctgacgtcggacgtggtggtcgtcgagatcaaggagcctgagcc 376 |||| ||| ||| ||| ||| ||||| || |||||||||||||||||||| Sbjct: 1769 agacattcttgatgtctgactgtgtggttgttgagatcaaggagcctgagcc 1820
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgaga 189 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| | |||| Sbjct: 1590 gctacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgtcagtgaga 1649 Query: 190 aggttctttcta 201 |||||||||||| Sbjct: 1650 aggttctttcta 1661 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || || || |||||||||||||| |||||||| Sbjct: 1715 atggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgc 1770 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 1466 gaaggtattgttgttggcggaggatgtactct 1497
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgaga 189 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| | |||| Sbjct: 1630 gctacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgtcagtgaga 1689 Query: 190 aggttctttcta 201 |||||||||||| Sbjct: 1690 aggttctttcta 1701 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || || || |||||||||||||| |||||||| Sbjct: 1755 atggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgc 1810 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 1506 gaaggtattgttgttggcggaggatgtactct 1537
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 87.7 bits (44), Expect = 4e-14 Identities = 245/312 (78%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||| |||||||| || |||||||| | |||| || | ||||| || Sbjct: 1371 tgaggaaggtattgtcgttggtggtggttgcactctgctccggcttgcatcaaaggtcga 1430 Query: 62 tgccatcaaggacaccctggagaacgacgagcagaaggtcggagctgagatagtgaggag 121 |||||||||||| ||||| || || || || | ||||| ||||| || || || | || Sbjct: 1431 tgccatcaaggatacccttgaaaatgatgaagaaaaggttggagcggaaattgttaaaag 1490 Query: 122 ggcgctgtgctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 || ||| | ||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 1491 agcactgagttaccctctgaaattgatagctaagaatgctggtgttaatggaagtgttgt 1550 Query: 182 taccgagaaggttctttctaacgacaacttcaagttcggctacaacgcagccactgggca 241 | ||||||||| || ||||||| || | || || || ||||| || || || || | Sbjct: 1551 cagcgagaaggtgctggctaacgataatgtgaaatttggatacaatgctgcaaccggcaa 1610 Query: 242 gtacgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcct 301 ||| || ||| |||||||||| || ||||||||||| || ||||| |||||||||||| | Sbjct: 1611 gtatgaagacctgatggctgcaggcatcatcgacccgacaaaggttgtgagatgttgctt 1670 Query: 302 ggagcatgccgc 313 || |||||||| Sbjct: 1671 agaacatgccgc 1682
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgaga 189 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| | |||| Sbjct: 228 gctacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgtcagtgaga 287 Query: 190 aggttctttcta 201 |||||||||||| Sbjct: 288 aggttctttcta 299 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || || || |||||||||||||| |||||||| Sbjct: 353 atggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgc 408 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 104 gaaggtattgttgttggcggaggatgtactct 135
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgaga 189 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| | |||| Sbjct: 451 gctacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgtcagtgaga 510 Query: 190 aggttctttcta 201 |||||||||||| Sbjct: 511 aggttctttcta 522 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || || || |||||||||||||| |||||||| Sbjct: 576 atggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgc 631 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 327 gaaggtattgttgttggcggaggatgtactct 358
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgaga 189 |||||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | |||| Sbjct: 984 gctacccactgaagttaatcgccaagaacgctggtgtaaatggcagcgttgtcagtgaga 1043 Query: 190 aggttctttct 200 ||||||||||| Sbjct: 1044 aggttctttct 1054 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || || || |||||||||||||| |||||||| Sbjct: 1109 atggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgc 1164 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 860 gaaggtattgttgttggcggaggatgtactct 891
>dbj|AK118623.2| Arabidopsis thaliana At3g13470 mRNA for putative chaperonin 60 beta, complete cds, clone: RAFL19-88-M03 Length = 471 Score = 75.8 bits (38), Expect = 2e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 144 ttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggttctttctaac 203 ||||| || |||||||||||||| ||||| |||||||| | ||||||||| || ||||| Sbjct: 16 ttgatagctaagaatgctggtgttaatggaagtgttgtcagcgagaaggtgctggctaac 75 Query: 204 gacaacttcaagttcggctacaacgcagccactgggcagtacgaggacttgatggctgct 263 || || | || || || ||||| || || || || |||| || ||| |||||||||| Sbjct: 76 gataatgtgaaatttggatacaatgctgcaaccggcaagtatgaagacctgatggctgca 135 Query: 264 ggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgccgc 313 || ||||||||||| || ||||| |||||||||||| | || |||||||| Sbjct: 136 ggcatcatcgacccgacaaaggttgtgagatgttgcttagaacatgccgc 185
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 130 gctacccactcaagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 1862 gctacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgt 1913 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 aaggtggtgagatgttgcctggagcatgc 310 ||||| |||||||||||||| |||||||| Sbjct: 2169 aaggttgtgagatgttgcctagagcatgc 2197 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||| ||||| || ||||| Sbjct: 1638 gaaggtattgttgttggcggaggatgtactct 1669
>gb|DQ226886.1| Boechera divaricarpa isolate SLW-C-H11 mRNA sequence Length = 331 Score = 69.9 bits (35), Expect = 1e-08 Identities = 131/163 (80%) Strand = Plus / Plus Query: 244 acgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctgg 303 ||||||| || |||||||| || |||||||| || || ||||| |||||||||||| ||| Sbjct: 1 acgaggatttaatggctgcaggaatcatcgatccaacaaaggttgtgagatgttgcttgg 60 Query: 304 agcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagatca 363 | || || || || || || ||||| ||| ||| ||||||| || || || ||||||| Sbjct: 61 aacacgcagcttcagttgcaaagacgttcttgatgtcggactgtgttgttgttgagatca 120 Query: 364 aggagcctgagcccgcgcccctcgtcaaccccatggacaactc 406 |||| ||||| || || ||| ||| |||||| ||||||||||| Sbjct: 121 aggaacctgaaccagcccccgtcggcaacccaatggacaactc 163
>gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-like subunit, partial cds Length = 1618 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 245 cgaggacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctgga 304 ||||||| |||||| || || |||||||||||||| |||||||| | || | ||||| Sbjct: 612 cgaggacctgatggaggccggcatcatcgaccccaccaaggtggtccgctgctcgctgga 671 Query: 305 gcatgccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagatc 362 | | |||| |||||||||||||||||||||| | | |||||||||||| ||||||| Sbjct: 672 gaacgccgtgtcggtggccaagaccttcctgctggctgacgtggtggtcaccgagatc 729
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 283 aggtggtgagatgttgcctggagcatgccgcgtcggtggc 322 ||||||||||||||||| |||||||||| ||||||||||| Sbjct: 163107 aggtggtgagatgttgcttggagcatgctgcgtcggtggc 163146 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 156 aatgctggtgtcaatggcagtgttgttaccgagaaggtt 194 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 162612 aatgctggtgttaacggcagtgttgttactgagaaggtt 162650 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 162353 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 162412 Query: 62 tgccat 67 |||||| Sbjct: 162413 tgccat 162418 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 246 gaggacttgatggctgctggtatcatcgaccccactaaggt 286 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 162791 gaggatttgatggctgctggtattattgatcccaccaaggt 162831
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 283 aggtggtgagatgttgcctggagcatgccgcgtcggtggc 322 ||||||||||||||||| |||||||||| ||||||||||| Sbjct: 112134 aggtggtgagatgttgcttggagcatgctgcgtcggtggc 112173 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 156 aatgctggtgtcaatggcagtgttgttaccgagaaggtt 194 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 111639 aatgctggtgttaacggcagtgttgttactgagaaggtt 111677 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||||||||| || || || || |||||| |||| || | || ||||| Sbjct: 111380 tgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttga 111439 Query: 62 tgccat 67 |||||| Sbjct: 111440 tgccat 111445 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 246 gaggacttgatggctgctggtatcatcgaccccactaaggt 286 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 111818 gaggatttgatggctgctggtattattgatcccaccaaggt 111858
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 147 atcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggt 193 |||||||||||||||||||| ||||| ||||| |||| ||||||||| Sbjct: 54666 atcgccaagaatgctggtgttaatggaagtgtagttagcgagaaggt 54712 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 gaggaaggtattgttgttggtggagggtgcactct 37 ||||||||||||||||||||||| || |||||||| Sbjct: 54448 gaggaaggtattgttgttggtggtggttgcactct 54482 Score = 48.1 bits (24), Expect = 0.037 Identities = 99/124 (79%) Strand = Plus / Plus Query: 283 aggtggtgagatgttgcctggagcatgccgcgtcggtggccaagaccttcctgacgtcgg 342 |||| |||||||||||| |||| || || || ||||| || ||||| ||| ||| ||||| Sbjct: 54981 aggttgtgagatgttgcttggaacacgcagcttcggttgcaaagactttcttgatgtcgg 55040 Query: 343 acgtggtggtcgtcgagatcaaggagcctgagcccgcgcccctcgtcaaccccatggaca 402 || || || || ||||||||||| ||||| || | ||| ||| |||||| ||||||| Sbjct: 55041 actgcgttgttgttgagatcaaggaacctgaaccagttcccgtcggcaacccaatggaca 55100 Query: 403 actc 406 |||| Sbjct: 55101 actc 55104 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 241 agtacgaggacttgatggctgctggtatcatcga 274 |||||||||| ||||||||||| || |||||||| Sbjct: 54847 agtacgaggatttgatggctgcaggaatcatcga 54880
>gb|L27471.1|CRECPN1A Chlamydomonas reinhardtii chaperonin beta-like subunit, complete cds Length = 1970 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 267 atcatcgaccccactaaggtggtgagatgttgcctggagcatgccgcgtcggtggccaag 326 |||||||||||| | |||||||| | || | | ||||| | |||| ||||||||||||| Sbjct: 1141 atcatcgacccctccaaggtggtccgctgctccatggagaacgccgtgtcggtggccaag 1200 Query: 327 accttcctgacgtcggacgtggtggtc 353 ||||||||| | |||||||||||||| Sbjct: 1201 accttcctgctggcggacgtggtggtc 1227
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcac 34 ||||||||||||||||||||| ||||||||||| Sbjct: 1417 tgaggaaggtattgttgttggaggagggtgcac 1449 Score = 44.1 bits (22), Expect = 0.58 Identities = 97/122 (79%) Strand = Plus / Plus Query: 249 gacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcat 308 ||||| ||||||||||| ||||| || || || ||||||||||| ||||| || || || Sbjct: 1664 gacttaatggctgctggcatcattgatccaacaaaggtggtgaggtgttgtctagaacac 1723 Query: 309 gccgcgtcggtggccaagaccttcctgacgtcggacgtggtggtcgtcgagatcaaggag 368 || || || ||||| ||||| ||| ||| ||| || ||||| || |||||||||||| Sbjct: 1724 gctgcatctgtggctaagacattcttgatgtcagattgcgtggtggttgagatcaaggag 1783 Query: 369 cc 370 || Sbjct: 1784 cc 1785
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 144 ttgatcgccaagaatgctggtgtcaatggcagtgttgttaccgagaaggtt 194 ||||| || |||||||||||||| ||||| |||||||| | |||||||||| Sbjct: 46003 ttgatagctaagaatgctggtgttaatggaagtgttgtcagcgagaaggtt 46053 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 2 tgaggaaggtattgttgttggtggagggtgcactcttttgaggctggctgctaaggttga 61 ||||||||||||||| |||||||| || |||||||| | |||| || | ||||| || Sbjct: 45780 tgaggaaggtattgtcgttggtggtggttgcactctgctccggcttgcatcaaaggtcga 45839 Query: 62 tgccatcaaggacaccct 79 |||||||||||| ||||| Sbjct: 45840 tgccatcaaggataccct 45857
>dbj|AB158542.1| Ipomoea nil cpn60 beta mRNA for 60 kDa chaperonin beta subunit-like protein, partial cds Length = 437 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 249 gacttgatggctgctggtatcatcgaccccactaaggtggtgagatgttg 298 ||||||||||||||||| || || || || || ||||||||||||||||| Sbjct: 1 gacttgatggctgctggaattattgatccaaccaaggtggtgagatgttg 50
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 141 aagttgatcgccaagaatgctggtgtcaatggcagtgttgt 181 ||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 1585 aagttaatagccaagaatgctggtgttaatggaagtgttgt 1625 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||||||||| || || || || || ||||| ||||||||| |||||||||| Sbjct: 1699 atggctgctggtataattgatcctacaaaagtggtaagatgttgcttggagcatgc 1754
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 255 atggctgctggtatcatcgaccccactaaggtggtgagatgttgcctggagcatgc 310 |||||||| || ||||| || || || |||||||| |||||||||||||| ||||| Sbjct: 1739 atggctgcagggatcattgatccaacaaaggtggtcagatgttgcctggaacatgc 1794 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 153 aagaatgctggtgtcaatggcagtgttgttaccgagaaggttct 196 |||||||||||||| ||||| |||||||| | ||||||||||| Sbjct: 1637 aagaatgctggtgttaatggtagtgttgtgagtgagaaggttct 1680
>dbj|AK108892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E06, full insert sequence Length = 2254 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 90 gagcagaaggtcggagctgagatagtgaggagggcgctgtgctacccactcaagttgatc 149 |||||||||||||| || || || |||| || ||||||| ||||||||| ||| ||||| Sbjct: 1486 gagcagaaggtcggtgccgaaattgtgaagaaggcgctgacctacccactgaagctgatc 1545 Query: 150 gccaagaatgc 160 || ||||||| Sbjct: 1546 gcagagaatgc 1556
>gb|AF233387.1| Rhodococcus equi GroEL (groEL) gene, complete cds; and unknown genes Length = 4713 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Plus Query: 224 caacgcagccactgggcagtacgaggacttgatggctgctggtatcatcgaccc 277 |||||| ||||| || ||||||||||| || |||||||||| |||| |||||| Sbjct: 4258 caacgccgccaccggtgagtacgaggacctgctggctgctggcatcaacgaccc 4311
>ref|XM_975351.1| PREDICTED: Mus musculus similar to odd Oz/ten-m homolog 2 (LOC669490), mRNA Length = 7697 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 cgtcaaccccatggacaactcc 407 |||||||||||||||||||||| Sbjct: 2256 cgtcaaccccatggacaactcc 2277
>ref|XM_546253.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 2 (LOC489135), mRNA Length = 8210 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 cgtcaaccccatggacaactcc 407 |||||||||||||||||||||| Sbjct: 3852 cgtcaaccccatggacaactcc 3873
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 386 cgtcaaccccatggacaactcc 407 |||||||||||||||||||||| Sbjct: 113710 cgtcaaccccatggacaactcc 113689
>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete sequence Length = 157494 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 558 gaaataagcagagaaacattta 579 |||||||||||||||||||||| Sbjct: 138038 gaaataagcagagaaacattta 138017
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 261 gctggtatcatcgaccccactaaggt 286 ||||||||||||||||| |||||||| Sbjct: 381169 gctggtatcatcgacccaactaaggt 381194
>ref|NM_011856.2| Mus musculus odd Oz/ten-m homolog 2 (Drosophila) (Odz2), mRNA Length = 8797 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 cgtcaaccccatggacaactcc 407 |||||||||||||||||||||| Sbjct: 4345 cgtcaaccccatggacaactcc 4366
>dbj|AB025411.1| Mus musculus mRNA for Ten-m2, complete cds Length = 8797 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 cgtcaaccccatggacaactcc 407 |||||||||||||||||||||| Sbjct: 4345 cgtcaaccccatggacaactcc 4366
>gb|AC154130.1| Tribolium castaneum BAC T.cast_C11O3 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 148539 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 aaatttctttgatgtaattggaaca 608 ||||||| ||||||||||||||||| Sbjct: 44020 aaatttcattgatgtaattggaaca 43996
>ref|XM_614930.2| PREDICTED: Bos taurus similar to odd Oz/ten-m homolog 2 (LOC541183), mRNA Length = 4770 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gtcaaccccatggacaactcc 407 ||||||||||||||||||||| Sbjct: 1543 gtcaaccccatggacaactcc 1563
>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part of the GRM1 gene for metabotropic glutamate receptor 1 and a novel pseudogene, complete sequence Length = 53728 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 ttttgagataagaaaaatgca 533 ||||||||||||||||||||| Sbjct: 4531 ttttgagataagaaaaatgca 4551
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtggagtctctccagaggatgtgg 455 ||||||||||||||||||| |||| Sbjct: 70405 gtggagtctctccagaggaagtgg 70428
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaggttgatgccatcaagga 73 |||||||||||||||||||| Sbjct: 938133 aaggttgatgccatcaagga 938152
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gaaggtattgttgttggtgg 25 |||||||||||||||||||| Sbjct: 1773668 gaaggtattgttgttggtgg 1773687
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ggacgtggtggtcgtcgaga 360 |||||||||||||||||||| Sbjct: 36084 ggacgtggtggtcgtcgaga 36065
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ggacgtggtggtcgtcgaga 360 |||||||||||||||||||| Sbjct: 839929 ggacgtggtggtcgtcgaga 839910
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtggagtctctccagaggatgtgg 455 ||||||||||||||||||| |||| Sbjct: 148085 gtggagtctctccagaggaagtgg 148108
>emb|AM085495.1| Helicoverpa zea mRNA for carboxypeptidase B (cpb gene) Length = 1361 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ggaaggtattgttgttggtg 24 |||||||||||||||||||| Sbjct: 1263 ggaaggtattgttgttggtg 1282
>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence Length = 194593 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 catgaaccaagttttgagag 490 |||||||||||||||||||| Sbjct: 46073 catgaaccaagttttgagag 46054
>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence Length = 214318 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 atttttggtagcatgaaccaagtt 483 ||||||| |||||||||||||||| Sbjct: 67399 atttttgatagcatgaaccaagtt 67422
>ref|XM_809994.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503893.50) partial mRNA Length = 1215 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tggtggagggtgcactcttt 39 |||||||||||||||||||| Sbjct: 140 tggtggagggtgcactcttt 159
>ref|XM_546476.2| PREDICTED: Canis familiaris similar to RIKEN cDNA E130107N23 (LOC489358), mRNA Length = 1576 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aatggcagtgttgttaccga 187 |||||||||||||||||||| Sbjct: 1012 aatggcagtgttgttaccga 1031
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence Length = 212166 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gggtgcactcttttgaggct 46 |||||||||||||||||||| Sbjct: 178900 gggtgcactcttttgaggct 178919
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence Length = 212096 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gggtgcactcttttgaggct 46 |||||||||||||||||||| Sbjct: 183754 gggtgcactcttttgaggct 183735
>emb|AL049867.2|HSJ738I16 Human DNA sequence from clone RP4-738I16 on chromosome 20p11.22-12.2 Contains STSs and GSSs, complete sequence Length = 96444 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tcttttgaggctggctgcta 54 |||||||||||||||||||| Sbjct: 47902 tcttttgaggctggctgcta 47921
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ggacgtggtggtcgtcgaga 360 |||||||||||||||||||| Sbjct: 682345 ggacgtggtggtcgtcgaga 682326
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 atcatcgaccccactaaggtggtg 290 |||||||||||||| ||||||||| Sbjct: 3516136 atcatcgaccccaccaaggtggtg 3516159
>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence Length = 148726 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tagttttgagataagaaaaa 529 |||||||||||||||||||| Sbjct: 110036 tagttttgagataagaaaaa 110055
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gtgcactcttttgaggctgg 48 |||||||||||||||||||| Sbjct: 1902039 gtgcactcttttgaggctgg 1902020
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence Length = 184457 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 gtggtggtcgtcgagatcaaggag 368 |||||||||| ||||||||||||| Sbjct: 73965 gtggtggtcggcgagatcaaggag 73942
>gb|AF065610.1|AF065610 Toxoplasma gondii strain 76K heat shock protein 60 pseudogene, mRNA sequence Length = 2442 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 tgatggctgctggtatcatcgaccccac 280 |||||||||| || |||||||||||||| Sbjct: 1606 tgatggctgccggcatcatcgaccccac 1633
>gb|AF065609.1|AF065609 Toxoplasma gondii strain 76K heat shock protein 60 mRNA, complete cds Length = 2430 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 tgatggctgctggtatcatcgaccccac 280 |||||||||| || |||||||||||||| Sbjct: 1594 tgatggctgccggcatcatcgaccccac 1621
>gb|AC007630.4|AC007630 Homo sapiens chromosome 20 clone P1-7739, complete sequence Length = 169494 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tcttttgaggctggctgcta 54 |||||||||||||||||||| Sbjct: 66166 tcttttgaggctggctgcta 66185
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tggccaagaccttcctgacg 338 |||||||||||||||||||| Sbjct: 177394 tggccaagaccttcctgacg 177375
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ggacgtggtggtcgtcgaga 360 |||||||||||||||||||| Sbjct: 590845 ggacgtggtggtcgtcgaga 590826
>emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on chromosome X, complete sequence Length = 162188 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ctccagaggatgtggtttaa 460 |||||||||||||||||||| Sbjct: 5347 ctccagaggatgtggtttaa 5328
>emb|AL163973.1|CNS05TBS Human chromosome 14 DNA sequence BAC C-2213F21 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 116503 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gagataagaaaaatgcaatgtgat 540 |||||||| ||||||||||||||| Sbjct: 72503 gagataagtaaaatgcaatgtgat 72480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,414,284 Number of Sequences: 3902068 Number of extensions: 5414284 Number of successful extensions: 99230 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98756 Number of HSP's gapped (non-prelim): 457 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
