| Clone Name | rbaal9p03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197514.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.18), mRNA Length = 540 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacgccttg 501 ||||||||||| |||||||| ||||| ||||| || ||||||| ||||| ||||| |||| Sbjct: 233 tccttcttctccggctccttcgccggcccgacggactcgatggtcgccgcccacgacttg 174 Query: 502 cgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggtg 561 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 173 cgcagcttgctcaccacgttcaccgggtccaccatcccgatcaccgtcatcttctggctc 114 Query: 562 gccatgtccaccgacagcgagtctatgccgacgagcgccgacacgg 607 |||||||||| |||||| ||| ||||||| ||||||||| |||| Sbjct: 113 gccatgtccatggacagctcgtcgatgccgatgagcgccgagacgg 68 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctctgcacgacgtagtg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 540 tcagcagatggcgcaggagttggggttttcctccatgctctgcacgacgtagtg 487 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/129 (83%), Gaps = 9/129 (6%) Strand = Plus / Minus Query: 289 tactggttcatgagctcggc---gagctgctgctccgtcggctgtggcggcttcgcctcg 345 |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| Sbjct: 434 tactggttcatgagctcggcgaagagctgctgctccgtcggcgccgccggcttcttgtcg 375 Query: 346 ccgtcctccttcttggcc---ccgtccttgccgtcgccgtccttcttctccccctcgcct 402 |||||||||||||||||| |||||||| ||||||||||||||| || | ||||| Sbjct: 374 ccgtcctccttcttggcctcgccgtcctt---gtcgccgtccttcttggccgcatcgccg 318 Query: 403 tccttcttg 411 ||||||||| Sbjct: 317 tccttcttg 309 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/51 (88%), Gaps = 3/51 (5%) Strand = Plus / Minus Query: 376 tcgccgtccttcttctcccc---ctcgccttccttcttggcgtcggcgccg 423 |||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct: 323 tcgccgtccttcttgtccccggcctcgccttccttcttgccgtcgccgccg 273
>dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035E16, full insert sequence Length = 935 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacgccttg 501 ||||||||||| |||||||| ||||| ||||| || ||||||| ||||| ||||| |||| Sbjct: 377 tccttcttctccggctccttcgccggcccgacggactcgatggtcgccgcccacgacttg 318 Query: 502 cgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggtg 561 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 317 cgcagcttgctcaccacgttcaccgggtccaccatcccgatcaccgtcatcttctggctc 258 Query: 562 gccatgtccaccgacagcgagtctatgccgacgagcgccgacacgg 607 |||||||||| |||||| ||| ||||||| ||||||||| |||| Sbjct: 257 gccatgtccatggacagctcgtcgatgccgatgagcgccgagacgg 212 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctctgcacgacgtagtg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 684 tcagcagatggcgcaggagttggggttttcctccatgctctgcacgacgtagtg 631 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/129 (83%), Gaps = 9/129 (6%) Strand = Plus / Minus Query: 289 tactggttcatgagctcggc---gagctgctgctccgtcggctgtggcggcttcgcctcg 345 |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| Sbjct: 578 tactggttcatgagctcggcgaagagctgctgctccgtcggcgccgccggcttcttgtcg 519 Query: 346 ccgtcctccttcttggcc---ccgtccttgccgtcgccgtccttcttctccccctcgcct 402 |||||||||||||||||| |||||||| ||||||||||||||| || | ||||| Sbjct: 518 ccgtcctccttcttggcctcgccgtcctt---gtcgccgtccttcttggccgcatcgccg 462 Query: 403 tccttcttg 411 ||||||||| Sbjct: 461 tccttcttg 453 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/51 (88%), Gaps = 3/51 (5%) Strand = Plus / Minus Query: 376 tcgccgtccttcttctcccc---ctcgccttccttcttggcgtcggcgccg 423 |||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct: 467 tcgccgtccttcttgtccccggcctcgccttccttcttgccgtcgccgccg 417
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacgccttg 501 ||||||||||| |||||||| ||||| ||||| || ||||||| ||||| ||||| |||| Sbjct: 61313 tccttcttctccggctccttcgccggcccgacggactcgatggtcgccgcccacgacttg 61372 Query: 502 cgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggtg 561 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 61373 cgcagcttgctcaccacgttcaccgggtccaccatcccgatcaccgtcatcttctggctc 61432 Query: 562 gccatgtcca 571 |||||||||| Sbjct: 61433 gccatgtcca 61442 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Plus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctctgcacgacgtagtg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 61006 tcagcagatggcgcaggagttggggttttcctccatgctctgcacgacgtagtg 61059 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/129 (83%), Gaps = 9/129 (6%) Strand = Plus / Plus Query: 289 tactggttcatgagctcggc---gagctgctgctccgtcggctgtggcggcttcgcctcg 345 |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| Sbjct: 61112 tactggttcatgagctcggcgaagagctgctgctccgtcggcgccgccggcttcttgtcg 61171 Query: 346 ccgtcctccttcttggcc---ccgtccttgccgtcgccgtccttcttctccccctcgcct 402 |||||||||||||||||| |||||||| ||||||||||||||| || | ||||| Sbjct: 61172 ccgtcctccttcttggcctcgccgtcctt---gtcgccgtccttcttggccgcatcgccg 61228 Query: 403 tccttcttg 411 ||||||||| Sbjct: 61229 tccttcttg 61237 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/51 (88%), Gaps = 3/51 (5%) Strand = Plus / Plus Query: 376 tcgccgtccttcttctcccc---ctcgccttccttcttggcgtcggcgccg 423 |||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct: 61223 tcgccgtccttcttgtccccggcctcgccttccttcttgccgtcgccgccg 61273
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacgccttg 501 ||||||||||| |||||||| ||||| ||||| || ||||||| ||||| ||||| |||| Sbjct: 20183578 tccttcttctccggctccttcgccggcccgacggactcgatggtcgccgcccacgacttg 20183637 Query: 502 cgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggtg 561 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 20183638 cgcagcttgctcaccacgttcaccgggtccaccatcccgatcaccgtcatcttctggctc 20183697 Query: 562 gccatgtcca 571 |||||||||| Sbjct: 20183698 gccatgtcca 20183707 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Plus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctctgcacgacgtagtg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20183271 tcagcagatggcgcaggagttggggttttcctccatgctctgcacgacgtagtg 20183324 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/129 (83%), Gaps = 9/129 (6%) Strand = Plus / Plus Query: 289 tactggttcatgagctcggc---gagctgctgctccgtcggctgtggcggcttcgcctcg 345 |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| Sbjct: 20183377 tactggttcatgagctcggcgaagagctgctgctccgtcggcgccgccggcttcttgtcg 20183436 Query: 346 ccgtcctccttcttggcc---ccgtccttgccgtcgccgtccttcttctccccctcgcct 402 |||||||||||||||||| |||||||| ||||||||||||||| || | ||||| Sbjct: 20183437 ccgtcctccttcttggcctcgccgtcctt---gtcgccgtccttcttggccgcatcgccg 20183493 Query: 403 tccttcttg 411 ||||||||| Sbjct: 20183494 tccttcttg 20183502 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/51 (88%), Gaps = 3/51 (5%) Strand = Plus / Plus Query: 376 tcgccgtccttcttctcccc---ctcgccttccttcttggcgtcggcgccg 423 |||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct: 20183488 tcgccgtccttcttgtccccggcctcgccttccttcttgccgtcgccgccg 20183538
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacgccttg 501 ||||||||||| |||||||| ||||| ||||| || ||||||| ||||| ||||| |||| Sbjct: 20194854 tccttcttctccggctccttcgccggcccgacggactcgatggtcgccgcccacgacttg 20194913 Query: 502 cgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggtg 561 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 20194914 cgcagcttgctcaccacgttcaccgggtccaccatcccgatcaccgtcatcttctggctc 20194973 Query: 562 gccatgtcca 571 |||||||||| Sbjct: 20194974 gccatgtcca 20194983 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Plus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctctgcacgacgtagtg 245 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20194547 tcagcagatggcgcaggagttggggttttcctccatgctctgcacgacgtagtg 20194600 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/129 (83%), Gaps = 9/129 (6%) Strand = Plus / Plus Query: 289 tactggttcatgagctcggc---gagctgctgctccgtcggctgtggcggcttcgcctcg 345 |||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| Sbjct: 20194653 tactggttcatgagctcggcgaagagctgctgctccgtcggcgccgccggcttcttgtcg 20194712 Query: 346 ccgtcctccttcttggcc---ccgtccttgccgtcgccgtccttcttctccccctcgcct 402 |||||||||||||||||| |||||||| ||||||||||||||| || | ||||| Sbjct: 20194713 ccgtcctccttcttggcctcgccgtcctt---gtcgccgtccttcttggccgcatcgccg 20194769 Query: 403 tccttcttg 411 ||||||||| Sbjct: 20194770 tccttcttg 20194778 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/51 (88%), Gaps = 3/51 (5%) Strand = Plus / Plus Query: 376 tcgccgtccttcttctcccc---ctcgccttccttcttggcgtcggcgccg 423 |||||||||||||| ||||| |||||||||||||||| ||||| ||||| Sbjct: 20194764 tcgccgtccttcttgtccccggcctcgccttccttcttgccgtcgccgccg 20194814
>ref|NM_187580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 588 Score = 129 bits (65), Expect = 1e-26 Identities = 115/131 (87%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 444 cttcttctcgggctccttggccgggccgactgagtcgatggacgccgacca---cgcctt 500 ||||||||| ||||||||||||||||||| || |||||| | |||| ||| |||||| Sbjct: 234 cttcttctccggctccttggccgggccgagggactcgatgtaggccggccaggacgcctt 175 Query: 501 gcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggt 560 |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | Sbjct: 174 gcgcagcttgctcaccacgttcaccgggtcaaccgtgccgatcaccgtcatcttgcgcga 115 Query: 561 ggccatgtcca 571 |||||||||| Sbjct: 114 cgccatgtcca 104 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| ||||| || | |||||||||||||||||||||| Sbjct: 588 tcagcaaatggcacacgggttggggttctcctccatgctc 549
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 1e-26 Identities = 115/131 (87%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 444 cttcttctcgggctccttggccgggccgactgagtcgatggacgccgacca---cgcctt 500 ||||||||| ||||||||||||||||||| || |||||| | |||| ||| |||||| Sbjct: 1491723 cttcttctccggctccttggccgggccgagggactcgatgtaggccggccaggacgcctt 1491664 Query: 501 gcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggt 560 |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | Sbjct: 1491663 gcgcagcttgctcaccacgttcaccgggtcaaccgtgccgatcaccgtcatcttgcgcga 1491604 Query: 561 ggccatgtcca 571 |||||||||| Sbjct: 1491603 cgccatgtcca 1491593 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| ||||| || | |||||||||||||||||||||| Sbjct: 1492077 tcagcaaatggcacacgggttggggttctcctccatgctc 1492038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 3028751 ggcgcaggagttggggttctc 3028771
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 129 bits (65), Expect = 1e-26 Identities = 115/131 (87%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 444 cttcttctcgggctccttggccgggccgactgagtcgatggacgccgacca---cgcctt 500 ||||||||| ||||||||||||||||||| || |||||| | |||| ||| |||||| Sbjct: 28896 cttcttctccggctccttggccgggccgagggactcgatgtaggccggccaggacgcctt 28837 Query: 501 gcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggt 560 |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | Sbjct: 28836 gcgcagcttgctcaccacgttcaccgggtcaaccgtgccgatcaccgtcatcttgcgcga 28777 Query: 561 ggccatgtcca 571 |||||||||| Sbjct: 28776 cgccatgtcca 28766 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| ||||| || | |||||||||||||||||||||| Sbjct: 29250 tcagcaaatggcacacgggttggggttctcctccatgctc 29211
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 1e-26 Identities = 115/131 (87%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 444 cttcttctcgggctccttggccgggccgactgagtcgatggacgccgacca---cgcctt 500 ||||||||| ||||||||||||||||||| || |||||| | |||| ||| |||||| Sbjct: 1491721 cttcttctccggctccttggccgggccgagggactcgatgtaggccggccaggacgcctt 1491662 Query: 501 gcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggt 560 |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | Sbjct: 1491661 gcgcagcttgctcaccacgttcaccgggtcaaccgtgccgatcaccgtcatcttgcgcga 1491602 Query: 561 ggccatgtcca 571 |||||||||| Sbjct: 1491601 cgccatgtcca 1491591 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| ||||| || | |||||||||||||||||||||| Sbjct: 1492075 tcagcaaatggcacacgggttggggttctcctccatgctc 1492036 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 3028862 ggcgcaggagttggggttctc 3028882
>dbj|AK099929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L13, full insert sequence Length = 965 Score = 129 bits (65), Expect = 1e-26 Identities = 115/131 (87%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 444 cttcttctcgggctccttggccgggccgactgagtcgatggacgccgacca---cgcctt 500 ||||||||| ||||||||||||||||||| || |||||| | |||| ||| |||||| Sbjct: 433 cttcttctccggctccttggccgggccgagggactcgatgtaggccggccaggacgcctt 374 Query: 501 gcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgggt 560 |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | Sbjct: 373 gcgcagcttgctcaccacgttcaccgggtcaaccgtgccgatcaccgtcatcttgcgcga 314 Query: 561 ggccatgtcca 571 |||||||||| Sbjct: 313 cgccatgtcca 303 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| ||||| || | |||||||||||||||||||||| Sbjct: 787 tcagcaaatggcacacgggttggggttctcctccatgctc 748
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 125 bits (63), Expect = 2e-25 Identities = 116/133 (87%), Gaps = 3/133 (2%) Strand = Plus / Minus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacg---cc 498 ||||||||||| |||||||||||||| ||||| || |||||| | |||| ||||| || Sbjct: 13222459 tccttcttctccggctccttggccggtccgaccgactcgatgtaggccgcccacgacgcc 13222400 Query: 499 ttgcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgg 558 ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || Sbjct: 13222399 ttgcggagcttgctcaccacgtccaccggatccaccgtgccgatcaccgtcatcttccgc 13222340 Query: 559 gtggccatgtcca 571 | |||||||||| Sbjct: 13222339 gacgccatgtcca 13222327 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| |||||||| |||||||||||||||||||||||| Sbjct: 13222943 tcagcaaatggcgcacgagttggggttctcctccatgctc 13222904
>dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098J19, full insert sequence Length = 1289 Score = 125 bits (63), Expect = 2e-25 Identities = 116/133 (87%), Gaps = 3/133 (2%) Strand = Plus / Minus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacg---cc 498 ||||||||||| |||||||||||||| ||||| || |||||| | |||| ||||| || Sbjct: 497 tccttcttctccggctccttggccggtccgaccgactcgatgtaggccgcccacgacgcc 438 Query: 499 ttgcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgg 558 ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || Sbjct: 437 ttgcggagcttgctcaccacgtccaccggatccaccgtgccgatcaccgtcatcttccgc 378 Query: 559 gtggccatgtcca 571 | |||||||||| Sbjct: 377 gacgccatgtcca 365 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| |||||||| |||||||||||||||||||||||| Sbjct: 981 tcagcaaatggcgcacgagttggggttctcctccatgctc 942
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 125 bits (63), Expect = 2e-25 Identities = 116/133 (87%), Gaps = 3/133 (2%) Strand = Plus / Minus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacg---cc 498 ||||||||||| |||||||||||||| ||||| || |||||| | |||| ||||| || Sbjct: 13176733 tccttcttctccggctccttggccggtccgaccgactcgatgtaggccgcccacgacgcc 13176674 Query: 499 ttgcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgg 558 ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || Sbjct: 13176673 ttgcggagcttgctcaccacgtccaccggatccaccgtgccgatcaccgtcatcttccgc 13176614 Query: 559 gtggccatgtcca 571 | |||||||||| Sbjct: 13176613 gacgccatgtcca 13176601 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| |||||||| |||||||||||||||||||||||| Sbjct: 13177217 tcagcaaatggcgcacgagttggggttctcctccatgctc 13177178
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 125 bits (63), Expect = 2e-25 Identities = 116/133 (87%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 442 tccttcttctcgggctccttggccgggccgactgagtcgatggacgccgaccacg---cc 498 ||||||||||| |||||||||||||| ||||| || |||||| | |||| ||||| || Sbjct: 108284 tccttcttctccggctccttggccggtccgaccgactcgatgtaggccgcccacgacgcc 108343 Query: 499 ttgcgcagcttgctcaccacgtccaccgggtccaccatgccgatcaccgtcatcttgcgg 558 ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| || Sbjct: 108344 ttgcggagcttgctcaccacgtccaccggatccaccgtgccgatcaccgtcatcttccgc 108403 Query: 559 gtggccatgtcca 571 | |||||||||| Sbjct: 108404 gacgccatgtcca 108416 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 |||||| |||||||| |||||||||||||||||||||||| Sbjct: 107800 tcagcaaatggcgcacgagttggggttctcctccatgctc 107839
>gb|AY105811.1| Zea mays PCO068837 mRNA sequence Length = 525 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcctccatgctc 231 ||||||||||||||| ||||| |||||||||||||||||| Sbjct: 294 tcagcagatggcgcacgagtttgggttctcctccatgctc 255
>gb|AY033471.1| Zea mays subsp. parviglumis isolate phi96100-PAR-MZ1 microsatellite sequence Length = 216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcct 223 |||||||||||||||||||||||||| ||||| Sbjct: 32 tcagcagatggcgcaggagttggggtcctcct 1
>gb|AY033470.1| Zea mays subsp. mays isolate phi96100-Mo17 microsatellite sequence Length = 288 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcct 223 |||||||||||||||||||||||||| ||||| Sbjct: 32 tcagcagatggcgcaggagttggggtcctcct 1
>gb|AY033468.1| Zea mays subsp. mays isolate phi96100-CML254 microsatellite sequence Length = 275 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcct 223 |||||||||||||||||||||||||| ||||| Sbjct: 32 tcagcagatggcgcaggagttggggtcctcct 1
>gb|AY033467.1| Zea mays subsp. mays isolate phi96100-B73 microsatellite sequence Length = 279 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 192 tcagcagatggcgcaggagttggggttctcct 223 |||||||||||||||||||||||||| ||||| Sbjct: 32 tcagcagatggcgcaggagttggggtcctcct 1
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 520 tccaccgggtccaccatgccgatc 543 |||||||||||||||||||||||| Sbjct: 1475362 tccaccgggtccaccatgccgatc 1475339
>gb|AF165146.6| Homo sapiens chromosome 8 clone CTA-397H3 map q12.1, complete sequence Length = 110554 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gacacatgtcattatttaagtta 47 ||||||||||||||||||||||| Sbjct: 1097 gacacatgtcattatttaagtta 1075
>gb|AC046176.13| Homo sapiens chromosome 8, clone RP11-446E9, complete sequence Length = 184349 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 gacacatgtcattatttaagtta 47 ||||||||||||||||||||||| Sbjct: 23989 gacacatgtcattatttaagtta 24011
>gb|AC107376.7| Homo sapiens chromosome 8, clone CTA-397H3, complete sequence Length = 110554 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gacacatgtcattatttaagtta 47 ||||||||||||||||||||||| Sbjct: 1098 gacacatgtcattatttaagtta 1076
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 364 ccgtccttgccgtcgccgtcctt 386 ||||||||||||||||||||||| Sbjct: 4689016 ccgtccttgccgtcgccgtcctt 4688994 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gccgtcgccgtccttcttct 391 |||||||||||||||||||| Sbjct: 5297949 gccgtcgccgtccttcttct 5297930
>emb|AJ577719.1|HVU577719 Hordeum vulgare subsp. vulgare TAM marker, clone SNP206 Length = 198 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 gatggcgcaggagttggggttctcctc 224 ||||||||||| ||||||||||||||| Sbjct: 161 gatggcgcaggcgttggggttctcctc 187
>gb|DQ100375.1| Struthio camelus preproopiomelanocortin mRNA, complete cds Length = 1072 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 377 cgccgtccttcttctccccctcgccttcct 406 ||||||||| ||||||| |||||||||||| Sbjct: 655 cgccgtcctccttctccgcctcgccttcct 626
>emb|AL138756.23| Human DNA sequence from clone RP11-4O1 on chromosome 9q31.3-33.1 Contains the 3' end of gene DKFZP761E1824, complete sequence Length = 189156 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cattatttaagttataattctc 55 |||||||||||||||||||||| Sbjct: 38973 cattatttaagttataattctc 38952
>emb|X51500.1|ABNIFH Azospirillum brasilense NifH gene Length = 1826 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gagctcggcgagctgctgctcc 321 |||||||||||||||||||||| Sbjct: 1575 gagctcggcgagctgctgctcc 1554
>emb|X51609.1|ABNIFHGE A.brasilense DNA for nifH, the gene encoding the nitrogenase iron protein Length = 1714 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gagctcggcgagctgctgctcc 321 |||||||||||||||||||||| Sbjct: 1222 gagctcggcgagctgctgctcc 1201
>gb|M64344.1|AZSFEFEMO A.brasilense Fe protein and FeMo protein subunits and 353 bp orf, complete cds Length = 6071 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gagctcggcgagctgctgctcc 321 |||||||||||||||||||||| Sbjct: 1215 gagctcggcgagctgctgctcc 1194
>ref|XM_470243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 459 ggcgcaggagttggggttctc 439
>gb|AY487937.1| Myxococcus xanthus hypothetical protein gene, partial cds; and hypothetical protein, adventurous gliding protein Z (aglZ), and MoxR-like ATPase (mla) genes, complete cds Length = 10518 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 tcggcgagctgctgctccgtc 324 ||||||||||||||||||||| Sbjct: 6895 tcggcgagctgctgctccgtc 6875 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcggcgagctgctgctccgt 323 |||||||||||||||||||| Sbjct: 7105 tcggcgagctgctgctccgt 7086
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gtcggcgccgtctttcttgcc 434 ||||||||||||||||||||| Sbjct: 1458094 gtcggcgccgtctttcttgcc 1458114
>gb|DQ459547.1| Belgica antarctica heat shock protein 90 (hsp90) mRNA, partial cds Length = 710 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgccttccttctt 410 ||||||||||| |||||||||||||||| Sbjct: 347 tccttcttctcttcctcgccttccttctt 319
>ref|XM_504032.1| Yarrowia lipolytica CLIB122, YALI0E16665g predicted mRNA Length = 762 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gcctcgccgtcctccttcttg 360 ||||||||||||||||||||| Sbjct: 602 gcctcgccgtcctccttcttg 582
>emb|AL161939.10| Human DNA sequence from clone RP11-276A18 on chromosome 20 Contains the 3' end of an variant of a novel gene, the 3' end of the ANGPT4 gene encoding angiopoietin 4, ESTs, STSs and GSSs, complete sequence Length = 38577 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 gcaggagttggggttctcctccatg 228 ||||||||||||||||| ||||||| Sbjct: 24094 gcaggagttggggttctgctccatg 24070
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gtcggcgccgtctttcttgcc 434 ||||||||||||||||||||| Sbjct: 75510 gtcggcgccgtctttcttgcc 75530
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gtcggcgccgtctttcttgcc 434 ||||||||||||||||||||| Sbjct: 142002 gtcggcgccgtctttcttgcc 142022
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 67510 ggcgcaggagttggggttctc 67490
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 166238 ggcgcaggagttggggttctc 166258
>dbj|AK105367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G06, full insert sequence Length = 822 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcgcaggagttggggttctc 221 ||||||||||||||||||||| Sbjct: 538 ggcgcaggagttggggttctc 518
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gcctcgccgtcctccttcttg 360 ||||||||||||||||||||| Sbjct: 1975401 gcctcgccgtcctccttcttg 1975381
>gb|DQ213273.1| Taeniopygia guttata clone 0061P0015F05 HSPC023 protein-like mRNA, complete sequence Length = 422 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ccttcttggccccgtccttg 372 |||||||||||||||||||| Sbjct: 305 ccttcttggccccgtccttg 286
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gccgacgagcgccgacacgg 607 |||||||||||||||||||| Sbjct: 45165 gccgacgagcgccgacacgg 45146
>gb|AF148071.2| Mus musculus cocaine and amphetamine regulated transcript protein precursor (Cart) gene, promoter region and complete cds Length = 5827 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccgtccttcttctccccctc 398 |||||||||||||||||||| Sbjct: 3389 ccgtccttcttctccccctc 3408
>ref|XM_368185.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01059.4) partial mRNA Length = 1074 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 gccgtcctccttcttggccccgtccttg 372 |||||||||||||||| | ||||||||| Sbjct: 978 gccgtcctccttcttgtcaccgtccttg 951
>ref|XM_415205.1| PREDICTED: Gallus gallus similar to Serine/threonine-protein kinase Chk2 (LOC416914), mRNA Length = 2313 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcctcataactgcattctgtacag 114 |||||| ||||||||||||||||| Sbjct: 1602 tcctcagaactgcattctgtacag 1625
>ref|XM_955705.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 ccttcttctccccctcgccttccttctt 410 |||||| |||| |||||||||||||||| Sbjct: 793 ccttctcctcctcctcgccttccttctt 766
>ref|XM_331322.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 ccttcttctccccctcgccttccttctt 410 |||||| |||| |||||||||||||||| Sbjct: 793 ccttctcctcctcctcgccttccttctt 766
>gb|AC133908.7| Mus musculus chromosome 5, clone RP24-299L9, complete sequence Length = 214270 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ttataattctcccatacaac 64 |||||||||||||||||||| Sbjct: 5671 ttataattctcccatacaac 5652
>ref|XM_745322.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06660) partial mRNA Length = 2640 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgagctgctgctccgtcggc 327 |||||||||||||||||||| Sbjct: 2580 cgagctgctgctccgtcggc 2561
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgccttccttct 409 ||||||| |||| ||||||||||||||| Sbjct: 78653 tccttctcctcctcctcgccttccttct 78626
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 tccaccgggtccaccatgccgatc 543 ||||||| |||||||||||||||| Sbjct: 16233 tccaccgcgtccaccatgccgatc 16210
>emb|CR679839.2|CNS0FNIJ Tetraodon nigroviridis full-length cDNA Length = 1183 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 966 cttcttggcgtcggcgtcgtcttt 943
>emb|CR679104.2|CNS0FMY4 Tetraodon nigroviridis full-length cDNA Length = 1174 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 943 cttcttggcgtcggcgtcgtcttt 920
>emb|CR677554.2|CNS0FLRH Tetraodon nigroviridis full-length cDNA Length = 1105 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 861 cttcttggcgtcggcgtcgtcttt 838
>emb|CR678211.2|CNS0FM9J Tetraodon nigroviridis full-length cDNA Length = 1187 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 942 cttcttggcgtcggcgtcgtcttt 919
>emb|CR676112.2|CNS0FKNQ Tetraodon nigroviridis full-length cDNA Length = 1102 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 864 cttcttggcgtcggcgtcgtcttt 841
>emb|CR670567.2|CNS0FGDP Tetraodon nigroviridis full-length cDNA Length = 1184 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 966 cttcttggcgtcggcgtcgtcttt 943
>emb|CR660669.2|CNS0F8QR Tetraodon nigroviridis full-length cDNA Length = 1093 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 863 cttcttggcgtcggcgtcgtcttt 840
>emb|CR660406.2|CNS0F8JG Tetraodon nigroviridis full-length cDNA Length = 1141 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 927 cttcttggcgtcggcgtcgtcttt 904
>emb|CR658583.1|CNS0F74T Tetraodon nigroviridis full-length cDNA Length = 1182 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 966 cttcttggcgtcggcgtcgtcttt 943
>gb|AC121523.6| Mus musculus chromosome 18, clone RP24-92N23, complete sequence Length = 202346 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tttccacgtgaatgtcctcc 89 |||||||||||||||||||| Sbjct: 165111 tttccacgtgaatgtcctcc 165130
>emb|CR648814.2|CNS0EZLG Tetraodon nigroviridis full-length cDNA Length = 1116 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 919 cttcttggcgtcggcgtcgtcttt 896
>emb|CR643055.2|CNS0EV5H Tetraodon nigroviridis full-length cDNA Length = 1148 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cttcttggcgtcggcgccgtcttt 428 |||||||||||||||| ||||||| Sbjct: 929 cttcttggcgtcggcgtcgtcttt 906
>ref|XM_501694.1| Yarrowia lipolytica CLIB122, YALI0C10802g predicted mRNA Length = 666 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgcc 401 |||||||||||||||||||| Sbjct: 662 tccttcttctccccctcgcc 643
>emb|BX011884.1|CNS08HC0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18DG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 970 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cctcgccgtcctccttcttg 360 |||||||||||||||||||| Sbjct: 514 cctcgccgtcctccttcttg 533
>emb|BX011883.1|CNS08HBZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18DG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1040 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cctcgccgtcctccttcttg 360 |||||||||||||||||||| Sbjct: 534 cctcgccgtcctccttcttg 515
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gccccgtccttgccgtcgcc 380 |||||||||||||||||||| Sbjct: 2746073 gccccgtccttgccgtcgcc 2746054
>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10 Length = 96283 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 ccttcttctccccctcgccttccttctt 410 |||||| |||| |||||||||||||||| Sbjct: 28720 ccttctcctcctcctcgccttccttctt 28693
>emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chromosome 11 Contains the 3' end of the Gas7 gene for growth arrest specific 7, the Rcvrn gene for recoverin, the Glp2r gene for glucagon-like peptide 2 receptor, a novel gene and the gene for a novel protein (1110001P11Rik), complete sequence Length = 212636 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgccttccttct 409 |||||||||||| |||| |||||||||| Sbjct: 202439 tccttcttctcctcctccccttccttct 202412
>gb|AF519794.1| Rattus norvegicus cocaine-amphetamine regulated transcript (Cart) gene, promoter region, exons 1 and 2 and partial cds Length = 1837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccgtccttcttctccccctc 398 |||||||||||||||||||| Sbjct: 1068 ccgtccttcttctccccctc 1087
>emb|BX120006.15| Zebrafish DNA sequence from clone DKEYP-21H4 in linkage group 3, complete sequence Length = 196854 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 taactgcattctgtacagag 116 |||||||||||||||||||| Sbjct: 39521 taactgcattctgtacagag 39502
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 ggcgcaggagttggggttctcctccatg 228 |||||||| || |||||||||||||||| Sbjct: 832205 ggcgcaggtgtcggggttctcctccatg 832232
>gb|AY052546.1| Glomerella graminicola chitin synthase B (CHSB) gene, complete cds Length = 4191 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tccttgccgtcgccgtccttcttc 390 |||||||||||| ||||||||||| Sbjct: 1772 tccttgccgtcgacgtccttcttc 1749
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cggcgagctgctgctccgtc 324 |||||||||||||||||||| Sbjct: 24178685 cggcgagctgctgctccgtc 24178704
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atgccgacgagcgccgacac 605 |||||||||||||||||||| Sbjct: 20216160 atgccgacgagcgccgacac 20216179
>gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146128 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgccttccttct 409 |||| |||||||||||| |||||||||| Sbjct: 8963 tcctccttctccccctctccttccttct 8936
>emb|BX932870.1| Gallus gallus finished cDNA, clone ChEST709b15 Length = 874 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcctcataactgcattctgtacag 114 |||||| ||||||||||||||||| Sbjct: 163 tcctcagaactgcattctgtacag 186
>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds Length = 92047 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gtccttcttctcgggctccttggc 464 ||||||||||| |||||||||||| Sbjct: 57854 gtccttcttctagggctccttggc 57831
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atgccgacgagcgccgacac 605 |||||||||||||||||||| Sbjct: 89466 atgccgacgagcgccgacac 89485
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cggcgagctgctgctccgtc 324 |||||||||||||||||||| Sbjct: 8774 cggcgagctgctgctccgtc 8793
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cggcgagctgctgctccgtc 324 |||||||||||||||||||| Sbjct: 112143 cggcgagctgctgctccgtc 112162
>emb|AL929027.10| Mouse DNA sequence from clone RP23-217F24 on chromosome 2, complete sequence Length = 174282 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcattatttaagttataatt 52 |||||||||||||||||||| Sbjct: 141217 tcattatttaagttataatt 141236
>dbj|AK119909.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A10, full insert sequence Length = 1892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cggcgagctgctgctccgtc 324 |||||||||||||||||||| Sbjct: 1263 cggcgagctgctgctccgtc 1244
>emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chromosome 13, complete sequence Length = 230723 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgtccttcttctccccctc 398 |||||||||||||||||||| Sbjct: 109314 ccgtccttcttctccccctc 109295
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgccttccttct 409 ||||||| |||| ||||||||||||||| Sbjct: 221155 tccttctcctcctcctcgccttccttct 221128
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tccttcttctccccctcgcc 401 |||||||||||||||||||| Sbjct: 1498361 tccttcttctccccctcgcc 1498342
>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete sequence Length = 213391 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gtccttcttctcgggctccttggc 464 ||||||||||| |||||||||||| Sbjct: 60348 gtccttcttctagggctccttggc 60371 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,382,299 Number of Sequences: 3902068 Number of extensions: 4382299 Number of successful extensions: 106916 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105867 Number of HSP's gapped (non-prelim): 1020 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)