| Clone Name | bags15p04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 599 bits (302), Expect = e-168 Identities = 480/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 1682 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 1741 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1742 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 1801 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 1802 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 1861 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 1862 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 1921 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 1922 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 1981 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 1982 aaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 2041 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 2042 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 2101 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 2102 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 2160 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 2161 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 2218
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 591 bits (298), Expect = e-166 Identities = 479/538 (89%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 234 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 293 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 294 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 353 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 354 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 413 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| ||||| Sbjct: 414 ctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccggagg 473 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 ||||||||||||||||||||||||| || ||||||||||||| |||||||| || ||||| Sbjct: 474 tgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaagaa 533 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttag 361 |||| | ||||| ||||||||||| ||||||||||| ||||| ||||||||| |||| || Sbjct: 534 aaccatgttcattattggtgctactaacaggccagatatcattgaccctgccttgctaag 593 Query: 362 gccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacca 421 |||||||||||||||||||||||||||||| ||||| ||||||| | || |||| || Sbjct: 594 gccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctgca 653 Query: 422 gatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctc 481 ||||||||||||||||||| ||||||| ||| ||||||||||| | || ||||| ||||| Sbjct: 654 gatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtaga-cctgaatgctc 712 Query: 482 ttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 713 ttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgc 770
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 426 bits (215), Expect = e-116 Identities = 461/539 (85%), Gaps = 3/539 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 1590 gttctatggccctcctggctgtggtaagaccttgttggccaaggcaattgccaatgagtg 1649 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||||||| | ||||| || ||| |||| |||||||||||||| ||||| Sbjct: 1650 ccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgtggtttggagagag 1709 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||| |||||||| |||||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1710 tgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgccatgtgtgctctt 1769 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggg-gatgctggag 240 ||| || || |||||||| |||||||| |||||||||||||| ||||| |||||||||| Sbjct: 1770 cttcgacgagcttgactcaattgctactcagagaggaagcagt-gtgggtgatgctggag 1828 Query: 241 gtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaaga 300 |||| |||||||| |||||||| |||||| |||| |||||||||||||||||||| |||| Sbjct: 1829 gtgcagctgatagggtgctgaatcagctgttgacagagatggatggcatgaatgccaaga 1888 Query: 301 aaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgctta 360 | || || ||||| ||||| ||||| |||||||| ||||||||||| || ||| |||||| Sbjct: 1889 agactgttttcattattggggctacaaacaggcctgacatcatagatccggccttgctta 1948 Query: 361 ggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacc 420 ||||||||||||| |||||||| |||||||| || || ||||||| | || |||| || Sbjct: 1949 ggccagggcgtctcgatcagctgatctacattccactgcctgatgagcaatctaggctcc 2008 Query: 421 agatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgct 480 | || ||||||||||||||||||||||| ||| |||| |||||| | || | ||| ||| Sbjct: 2009 aaattttcaaagcttgcctcaggaagtcccctgtggcgaaggatgtgga-cttgaacgct 2067 Query: 481 cttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 |||||||||||||||||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct: 2068 cttgccaagtacacccaaggcttcagtggtgcagatattacagaaatctgtcagcgtgc 2126
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 410 bits (207), Expect = e-111 Identities = 451/531 (84%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgtcag 65 ||||| |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 675 tatggccctcctggctgtggcaagactttgttggccaaggcaattgccaatgaatgccaa 734 Query: 66 gctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgag 125 ||||||||||| ||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 735 gctaacttcattagtgtgaagggtcctgaactgcttaccatgtggtttggtgagagtgag 794 Query: 126 gctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttcttt 185 || ||||| ||||||||||| |||||||||||| ||| || |||||||| ||||| ||| Sbjct: 795 gccaatgtccgtgagatttttgacaaggctaggcagtctgctccatgtgtcctctttttt 854 Query: 186 gatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggtgct 245 ||||| || ||||| |||||||| |||||||||||||| ||| || || || |||||| Sbjct: 855 gatgagctcgactccattgctactcagagaggaagcagtgttggtgacgccggtggtgct 914 Query: 246 gctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaacc 305 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 915 gctgatagggtgttgaaccagctgcttactgagatggatggcatgaatgccaagaagacg 974 Query: 306 gtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcca 365 || || || || ||||| || ||||| || |||||||| ||||| ||| |||| ||||| Sbjct: 975 gtttttattatcggtgcaactaacagaccggacatcattgacccagccttgctgaggcct 1034 Query: 366 gggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcaccagatc 425 ||||||||||||||||||||||| || ||||| || |||| | || |||| |||||| Sbjct: 1035 gggcgtcttgatcagcttatctatattcctctgcccgatgagcagtccaggcttcagatc 1094 Query: 426 ttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctcttgc 485 |||||||| || ||||||||||||||| ||||||||||| |||| | ||| |||||| || Sbjct: 1095 ttcaaagcctgtctcaggaagtctcctgtggccaaggatgttga-cttgaatgctctcgc 1153 Query: 486 caagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcg 536 ||| |||||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 1154 caaatacacccagggtttcagcggtgcagatatcacagagatctgccagcg 1204
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 402 bits (203), Expect = e-109 Identities = 458/539 (84%), Gaps = 3/539 (0%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 |||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1059 gttctatggtcctcctggttgtggtaaaaccttgttggcaaaggcaattgccaacgagtg 1118 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1119 ccaggctaacttcatcagtgtcaagggtcctgagttgcttaccatgtggtttggtgagag 1178 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||| || || || || || ||||| || |||||| | || || || ||||| ||||| Sbjct: 1179 tgaagccaacgtccgcgaaatttttgataaggctcgtcaatctgctccttgtgtcctctt 1238 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggg-gatgctggag 240 ||||||||| |||||||| ||||| || ||||||||||| || ||||| |||||||||| Sbjct: 1239 ctttgatgagcttgactcaattgcgactcagagaggaagtagt-gtgggtgatgctggag 1297 Query: 241 gtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaaga 300 |||| |||||||||||||| || ||||| ||||| || |||||||||||||| || |||| Sbjct: 1298 gtgcggctgatagagtgcttaatcagctactgacagaaatggatggcatgaacgccaaga 1357 Query: 301 aaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgctta 360 |||| || || || ||||||||||| |||||||| |||||||| || ||||| || || | Sbjct: 1358 aaactgtgtttattattggtgctacaaacaggcctgacatcattgatcctgctcttctga 1417 Query: 361 ggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcacc 420 |||||||||||||||| ||||| |||||||| || || ||||||| | || |||| || Sbjct: 1418 ggccagggcgtcttgaccagctgatctacattccactgcctgatgagcagtctaggctcc 1477 Query: 421 agatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgct 480 |||||||||| || ||||| |||||||| ||| |||| |||||| | || ||||| |||| Sbjct: 1478 agatcttcaaggcctgcctaaggaagtcccctgtggcaaaggatgtgga-cctgaatgct 1536 Query: 481 cttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 ||||| |||||||| ||||||||||| || || |||||||| ||||||||||||||||| Sbjct: 1537 cttgctaagtacacacaagggttcagtggagcagatatcacagaaatttgccagcgtgc 1595
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 337 bits (170), Expect = 2e-89 Identities = 291/330 (88%), Gaps = 1/330 (0%) Strand = Plus / Minus Query: 210 cagagaggaagcagcagtggggatgctggaggtgctgctgatagagtgctgaaccagctg 269 |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| || Sbjct: 2835089 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 2835030 Query: 270 ctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaac 329 ||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| ||| Sbjct: 2835029 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 2834970 Query: 330 aggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctac 389 |||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2834969 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 2834910 Query: 390 atccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtct 449 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 2834909 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 2834850 Query: 450 cctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcgg 509 ||| ||||||||||| | || ||||| |||||||||||| ||||||||||| ||||| || Sbjct: 2834849 cctgtggccaaggatgtaga-cctgaatgctcttgccaaatacacccaaggtttcagtgg 2834791 Query: 510 tgctgatatcactgaaatttgccagcgtgc 539 ||||||||| || ||||| ||||||||||| Sbjct: 2834790 tgctgatattacagaaatctgccagcgtgc 2834761 Score = 268 bits (135), Expect = 2e-68 Identities = 192/211 (90%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 2835380 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 2835321 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2835320 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 2835261 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 2835260 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 2835201 Query: 182 ctttgatgaacttgactcgattgctacccag 212 ||||||||| |||||||| |||||||||||| Sbjct: 2835200 ctttgatgagcttgactcaattgctacccag 2835170
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 337 bits (170), Expect = 2e-89 Identities = 291/330 (88%), Gaps = 1/330 (0%) Strand = Plus / Minus Query: 210 cagagaggaagcagcagtggggatgctggaggtgctgctgatagagtgctgaaccagctg 269 |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| || Sbjct: 2835200 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 2835141 Query: 270 ctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaac 329 ||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| ||| Sbjct: 2835140 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 2835081 Query: 330 aggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctac 389 |||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2835080 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 2835021 Query: 390 atccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtct 449 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 2835020 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 2834961 Query: 450 cctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcgg 509 ||| ||||||||||| | || ||||| |||||||||||| ||||||||||| ||||| || Sbjct: 2834960 cctgtggccaaggatgtaga-cctgaatgctcttgccaaatacacccaaggtttcagtgg 2834902 Query: 510 tgctgatatcactgaaatttgccagcgtgc 539 ||||||||| || ||||| ||||||||||| Sbjct: 2834901 tgctgatattacagaaatctgccagcgtgc 2834872 Score = 268 bits (135), Expect = 2e-68 Identities = 192/211 (90%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 2835491 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 2835432 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2835431 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 2835372 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 2835371 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 2835312 Query: 182 ctttgatgaacttgactcgattgctacccag 212 ||||||||| |||||||| |||||||||||| Sbjct: 2835311 ctttgatgagcttgactcaattgctacccag 2835281
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 337 bits (170), Expect = 2e-89 Identities = 291/330 (88%), Gaps = 1/330 (0%) Strand = Plus / Minus Query: 210 cagagaggaagcagcagtggggatgctggaggtgctgctgatagagtgctgaaccagctg 269 |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| || Sbjct: 107045 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 106986 Query: 270 ctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaac 329 ||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| ||| Sbjct: 106985 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 106926 Query: 330 aggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctac 389 |||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 106925 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 106866 Query: 390 atccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtct 449 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 106865 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 106806 Query: 450 cctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcgg 509 ||| ||||||||||| | || ||||| |||||||||||| ||||||||||| ||||| || Sbjct: 106805 cctgtggccaaggatgtaga-cctgaatgctcttgccaaatacacccaaggtttcagtgg 106747 Query: 510 tgctgatatcactgaaatttgccagcgtgc 539 ||||||||| || ||||| ||||||||||| Sbjct: 106746 tgctgatattacagaaatctgccagcgtgc 106717 Score = 268 bits (135), Expect = 2e-68 Identities = 192/211 (90%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| || || |||||||||||||| || || ||||| Sbjct: 107336 gttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtg 107277 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107276 ccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagag 107217 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||||||||||||||| |||||||||||| |||||| || ||||| ||||| Sbjct: 107216 tgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctctt 107157 Query: 182 ctttgatgaacttgactcgattgctacccag 212 ||||||||| |||||||| |||||||||||| Sbjct: 107156 ctttgatgagcttgactcaattgctacccag 107126
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 252 bits (127), Expect = 1e-63 Identities = 297/351 (84%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaac-cttattggccaaggcaatcgcaaatgagtg 61 |||||||||||||| || ||||| ||||| ||| ||| |||||||||| ||||||||||| Sbjct: 1604 ttctatggtcctccgggatgtgggaaaactcttcttg-ccaaggcaattgcaaatgagtg 1662 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||| || || ||||| ||| |||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1663 tcaagccaatttcattagtgtcaaaggacctgagctgcttaccatgtggtttggagagag 1722 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 |||||| ||||| ||||| ||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1723 tgaggccaatgtccgtgaaatttttgacaaggctagacaatctgcaccctgtgtcctctt 1782 Query: 182 ctttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggagg 241 ||||||||| |||||||| ||||| || ||||| |||||||| ||||| |||||||| || Sbjct: 1783 ctttgatgagcttgactctattgccactcagaggggaagcagtagtggtgatgctggtgg 1842 Query: 242 tgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 || |||||| | || || ||||| || |||||||| ||||||||||||||||| ||||| Sbjct: 1843 agcagctgatcgggttctcaaccaacttctgactgaaatggatggcatgaatgcaaagaa 1902 Query: 302 aaccgtcttcatcattggtgctaccaacaggccagacatcatagaccctgc 352 ||| || || || ||||| || || |||||||| || || || |||||||| Sbjct: 1903 aactgtttttattattggggccacaaacaggcctgatattattgaccctgc 1953
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 252 bits (127), Expect = 1e-63 Identities = 283/331 (85%), Gaps = 3/331 (0%) Strand = Plus / Plus Query: 210 cagagaggaagcagcagtggg-gatgctggaggtgctgctgatagagtgctgaaccagct 268 |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 15400488 cagagaggaagcagt-gtgggtgatgctggaggtgcagctgatagggtgctgaatcagct 15400546 Query: 269 gctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaa 328 | |||| |||||||||||||||||||| ||||| || || ||||| ||||| ||||| || Sbjct: 15400547 gttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaa 15400606 Query: 329 caggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatcta 388 |||||| ||||||||||| || ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 15400607 caggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatcta 15400666 Query: 389 catccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtc 448 ||| || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 15400667 cattccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtc 15400726 Query: 449 tcctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcg 508 ||| |||| |||||| | || | ||| ||||||||||||||||||||||| ||||| | Sbjct: 15400727 ccctgtggcgaaggatgtgga-cttgaacgctcttgccaagtacacccaaggcttcagtg 15400785 Query: 509 gtgctgatatcactgaaatttgccagcgtgc 539 |||| ||||| || ||||| || |||||||| Sbjct: 15400786 gtgcagatattacagaaatctgtcagcgtgc 15400816 Score = 180 bits (91), Expect = 3e-42 Identities = 178/207 (85%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 15400198 gttctatggccctcctggctgtggtaagaccttgttggccaaggcaattgccaatgagtg 15400257 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||||||| | ||||| || ||| |||| |||||||||||||| ||||| Sbjct: 15400258 ccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgtggtttggagagag 15400317 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||| |||||||| |||||||| || |||||||| | ||| || |||||||||||||| Sbjct: 15400318 tgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgccatgtgtgctctt 15400377 Query: 182 ctttgatgaacttgactcgattgctac 208 ||| || || |||||||| |||||||| Sbjct: 15400378 cttcgacgagcttgactcaattgctac 15400404
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 252 bits (127), Expect = 1e-63 Identities = 283/331 (85%), Gaps = 3/331 (0%) Strand = Plus / Plus Query: 210 cagagaggaagcagcagtggg-gatgctggaggtgctgctgatagagtgctgaaccagct 268 |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 117851 cagagaggaagcagt-gtgggtgatgctggaggtgcagctgatagggtgctgaatcagct 117909 Query: 269 gctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaa 328 | |||| |||||||||||||||||||| ||||| || || ||||| ||||| ||||| || Sbjct: 117910 gttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaa 117969 Query: 329 caggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatcta 388 |||||| ||||||||||| || ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 117970 caggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatcta 118029 Query: 389 catccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtc 448 ||| || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 118030 cattccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtc 118089 Query: 449 tcctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcg 508 ||| |||| |||||| | || | ||| ||||||||||||||||||||||| ||||| | Sbjct: 118090 ccctgtggcgaaggatgtgga-cttgaacgctcttgccaagtacacccaaggcttcagtg 118148 Query: 509 gtgctgatatcactgaaatttgccagcgtgc 539 |||| ||||| || ||||| || |||||||| Sbjct: 118149 gtgcagatattacagaaatctgtcagcgtgc 118179 Score = 180 bits (91), Expect = 3e-42 Identities = 178/207 (85%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 117561 gttctatggccctcctggctgtggtaagaccttgttggccaaggcaattgccaatgagtg 117620 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||||||| | ||||| || ||| |||| |||||||||||||| ||||| Sbjct: 117621 ccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgtggtttggagagag 117680 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||| |||||||| |||||||| || |||||||| | ||| || |||||||||||||| Sbjct: 117681 tgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgccatgtgtgctctt 117740 Query: 182 ctttgatgaacttgactcgattgctac 208 ||| || || |||||||| |||||||| Sbjct: 117741 cttcgacgagcttgactcaattgctac 117767
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 252 bits (127), Expect = 1e-63 Identities = 283/331 (85%), Gaps = 3/331 (0%) Strand = Plus / Plus Query: 210 cagagaggaagcagcagtggg-gatgctggaggtgctgctgatagagtgctgaaccagct 268 |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 15408729 cagagaggaagcagt-gtgggtgatgctggaggtgcagctgatagggtgctgaatcagct 15408787 Query: 269 gctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaa 328 | |||| |||||||||||||||||||| ||||| || || ||||| ||||| ||||| || Sbjct: 15408788 gttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaa 15408847 Query: 329 caggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatcta 388 |||||| ||||||||||| || ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 15408848 caggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatcta 15408907 Query: 389 catccctcttcctgatgtcgattcgaggcaccagatcttcaaagcttgcctcaggaagtc 448 ||| || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 15408908 cattccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtc 15408967 Query: 449 tcctttggccaaggatattgatcctgagtgctcttgccaagtacacccaagggttcagcg 508 ||| |||| |||||| | || | ||| ||||||||||||||||||||||| ||||| | Sbjct: 15408968 ccctgtggcgaaggatgtgga-cttgaacgctcttgccaagtacacccaaggcttcagtg 15409026 Query: 509 gtgctgatatcactgaaatttgccagcgtgc 539 |||| ||||| || ||||| || |||||||| Sbjct: 15409027 gtgcagatattacagaaatctgtcagcgtgc 15409057 Score = 180 bits (91), Expect = 3e-42 Identities = 178/207 (85%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 15408439 gttctatggccctcctggctgtggtaagaccttgttggccaaggcaattgccaatgagtg 15408498 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||||||| | ||||| || ||| |||| |||||||||||||| ||||| Sbjct: 15408499 ccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgtggtttggagagag 15408558 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||| |||||||| |||||||| || |||||||| | ||| || |||||||||||||| Sbjct: 15408559 tgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgccatgtgtgctctt 15408618 Query: 182 ctttgatgaacttgactcgattgctac 208 ||| || || |||||||| |||||||| Sbjct: 15408619 cttcgacgagcttgactcaattgctac 15408645
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 248 bits (125), Expect = 2e-62 Identities = 438/541 (80%), Gaps = 1/541 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||| ||||| || ||| | ||||| ||||| || || || |||||| Sbjct: 1599 ttctatggcccccctggttgtggaaagaccctcttggctaaggctattgcgaacgagtgt 1658 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||| ||||||||||| |||||||| || || ||||||||||| |||||| Sbjct: 1659 caagccaacttcattagtatcaagggtcctgagctcctcacaatgtggtttggagagagt 1718 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || |||||| | ||||| ||||||||||| | ||| || || ||||| || ||| Sbjct: 1719 gaagccaatgtgagagagatattcgacaaggcacgacagtctgccccttgtgttcttttc 1778 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 |||||||| || ||||| || || || |||||||| | ||| ||| |||||||| ||| Sbjct: 1779 tttgatgagctggactccatcgccactcagagagggaacagtgttggagatgctggtggt 1838 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || || |||||||| |||||||||| || || ||||||||||| |||||||||||||| Sbjct: 1839 gcagcagatagagtattgaaccagcttcttacggagatggatggaatgaatgctaagaag 1898 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttagg 362 || ||||||||||| || ||||| ||||| |||||||| || || ||||| || || | Sbjct: 1899 acggtcttcatcatcggagctacaaacagaccagacattattgatcctgcacttctgcgt 1958 Query: 363 ccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcaccag 422 || || ||||| |||||||| |||||||| ||||||||||||| || || | ||||| Sbjct: 1959 cctggtcgtctcgatcagctcatctacattcctcttcctgatgaggagtctcgttaccag 2018 Query: 423 atcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctct 482 ||||| || ||||| | ||||| || ||| |||| || ||| |||| |||||| ||||| Sbjct: 2019 atctttaagtcttgcttgaggaaatcacctgtggcgaaagatgttga-cctgagggctct 2077 Query: 483 tgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttg 542 ||| |||||||||||||| ||||| ||||| || ||||| || |||||||||||| |||| Sbjct: 2078 tgctaagtacacccaaggcttcagtggtgcggacatcacagagatttgccagcgttcttg 2137 Query: 543 c 543 | Sbjct: 2138 c 2138
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 222 bits (112), Expect = 9e-55 Identities = 425/528 (80%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||||||||| || || ||||| |||||| || | ||||||||||| |||||||| ||| Sbjct: 1629 ttctatggtcccccaggatgtgggaaaaccctacttgccaaggcaattgcaaatgaatgt 1688 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| || |||||| |||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 1689 caagctaattttatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagt 1748 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 ||||| ||||| ||||| |||||||| || || || || ||||| || || |||||| Sbjct: 1749 gaggcgaatgttcgtgaaattttcgataaagccagacaatctgcaccttgcgtcctcttc 1808 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 |||||||| |||||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1809 tttgatgagcttgactctattgctactcagaggggcagcagcagtggagatgctggagga 1868 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || |||||| | || |||| || || |||||||| ||||||||||||||||| ||||| Sbjct: 1869 gcagctgatcgtgttttgaatcaacttctgactgaaatggatggcatgaatgcaaagaag 1928 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttagg 362 || || || || ||||| || || |||||||| || || || |||||||| || ||| | Sbjct: 1929 actgtttttataattggggccacaaacaggcctgatataattgaccctgcacttcttcga 1988 Query: 363 ccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcaccag 422 || || |||||||| ||| | || || || ||||| || |||| ||||| | || ||| Sbjct: 1989 cctggccgtcttgaccagttaatttatattcctctgccagatgaagattcacgccatcag 2048 Query: 423 atcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgctct 482 || ||||| || || ||||| || || || || | |||||||||||| ||||| ||||| Sbjct: 2049 attttcaaggcatgtctcagaaaatcccccttatcaaaggatattgat-ctgagagctct 2107 Query: 483 tgccaagtacacccaagggttcagcggtgctgatatcactgaaatttg 530 ||||| | || ||||| || || || |||||||||||||| ||||| Sbjct: 2108 cgccaaacatactcaaggatttagtggggctgatatcactgagatttg 2155
>dbj|AK058908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E02, full insert sequence Length = 872 Score = 216 bits (109), Expect = 6e-53 Identities = 242/285 (84%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 255 gtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatc 314 |||||||| |||||| |||| |||||||||||||||||||| ||||| || || ||||| Sbjct: 1 gtgctgaatcagctgttgacagagatggatggcatgaatgccaagaagactgttttcatt 60 Query: 315 attggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtctt 374 ||||| ||||| |||||||| ||||||||||| || ||| ||||||||||||||||||| Sbjct: 61 attggggctacaaacaggcctgacatcatagatccggccttgcttaggccagggcgtctc 120 Query: 375 gatcagcttatctacatccctcttcctgatgtcgattcgaggcaccagatcttcaaagct 434 |||||||| |||||||| || || ||||||| | || |||| ||| || ||||||||| Sbjct: 121 gatcagctgatctacattccactgcctgatgagcaatctaggctccaaattttcaaagct 180 Query: 435 tgcctcaggaagtctcctttggccaaggatattgatcctgagtgctcttgccaagtacac 494 |||||||||||||| ||| |||| |||||| | || | ||| ||||||||||||||||| Sbjct: 181 tgcctcaggaagtcccctgtggcgaaggatgtgga-cttgaacgctcttgccaagtacac 239 Query: 495 ccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 |||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct: 240 ccaaggcttcagtggtgcagatattacagaaatctgtcagcgtgc 284
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 212 bits (107), Expect = 9e-52 Identities = 251/299 (83%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||||||||| || || ||||| ||||| || | ||||||||||| |||||||| ||| Sbjct: 1594 ttctatggtcccccaggatgtgggaaaactctacttgccaaggcaattgcaaatgaatgt 1653 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || || ||||||||| |||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 1654 caagccaatttcatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagt 1713 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 ||||| ||||| ||||| |||||||| || || || || || || || || |||||| Sbjct: 1714 gaggcgaatgttcgtgaaattttcgataaagcgagacaatccgctccctgcgtcctcttc 1773 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 |||||||| || ||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1774 tttgatgagctcgactctattgctactcagagaggaagcagcagtggagatgctggagga 1833 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaa 301 || |||||| | || |||||||| || ||||||| ||||||||||||||||| ||||| Sbjct: 1834 gcagctgatcgggttctgaaccaacttttgactgaaatggatggcatgaatgcaaagaa 1892
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 194 bits (98), Expect = 2e-46 Identities = 359/446 (80%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||||||||| || ||||| ||||| || || ||||| ||||| || ||||| ||| Sbjct: 1606 ttctatggtcctccaggatgtgggaaaactttgttagccaaagcaattgctaatgaatgt 1665 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||||||||||||| | || || || || ||||||| |||||||||||||| ||| Sbjct: 1666 caagctaacttcatcagtgtgaaaggtccagaattgcttacaatgtggtttggtgaaagt 1725 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || |||||||| | || ||||| |||||||| || || || |||||||| |||||| Sbjct: 1726 gaagctaatgttagagaaatttttgacaaggccagacaatcggctccatgtgtcctcttc 1785 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 |||||||| |||||||| ||||| || |||||||||||||| |||||||||||| ||| Sbjct: 1786 tttgatgagcttgactctattgccactcagagaggaagcagtgttggggatgctggtggt 1845 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||||||||| || || || || ||||||| |||||||||||| ||| || || Sbjct: 1846 gcggctgatagagttctaaatcaacttttgactgaaatggatggcatgtctgccaaaaag 1905 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttagg 362 || || ||||| ||||| || || ||||| || |||||||| ||||| || || ||| | Sbjct: 1906 actgtgttcataattggggcaactaacagacctgacatcattgacccagcacttcttcga 1965 Query: 363 ccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcaccag 422 ||||| ||||| ||||| | ||||| || ||||| ||||||| ||||| |||| || Sbjct: 1966 ccaggccgtctggatcaattgatctatattcctctccctgatgaggattcccggcatcaa 2025 Query: 423 atcttcaaagcttgcctcaggaagtc 448 ||||| ||||| ||| | |||||||| Sbjct: 2026 atctttaaagcctgcttgaggaagtc 2051 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 491 acacccaagggttcagcggtgctgatatcactgaaatttgccagcg 536 |||| ||||||||||| ||||||||||| || ||||| |||||||| Sbjct: 2093 acactcaagggttcagtggtgctgatattacagaaatatgccagcg 2138
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 194 bits (98), Expect = 2e-46 Identities = 359/446 (80%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||||||||| || ||||| ||||| || || ||||| ||||| || ||||| ||| Sbjct: 1626 ttctatggtcctccaggatgtgggaaaactttgttagccaaagcaattgctaatgaatgt 1685 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||||||||||||| | || || || || ||||||| |||||||||||||| ||| Sbjct: 1686 caagctaacttcatcagtgtgaaaggtccagaattgcttacaatgtggtttggtgaaagt 1745 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || |||||||| | || ||||| |||||||| || || || |||||||| |||||| Sbjct: 1746 gaagctaatgttagagaaatttttgacaaggccagacaatcggctccatgtgtcctcttc 1805 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 |||||||| |||||||| ||||| || |||||||||||||| |||||||||||| ||| Sbjct: 1806 tttgatgagcttgactctattgccactcagagaggaagcagtgttggggatgctggtggt 1865 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||||||||| || || || || ||||||| |||||||||||| ||| || || Sbjct: 1866 gcggctgatagagttctaaatcaacttttgactgaaatggatggcatgtctgccaaaaag 1925 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttagg 362 || || ||||| ||||| || || ||||| || |||||||| ||||| || || ||| | Sbjct: 1926 actgtgttcataattggggcaactaacagacctgacatcattgacccagcacttcttcga 1985 Query: 363 ccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgattcgaggcaccag 422 ||||| ||||| ||||| | ||||| || ||||| ||||||| ||||| |||| || Sbjct: 1986 ccaggccgtctggatcaattgatctatattcctctccctgatgaggattcccggcatcaa 2045 Query: 423 atcttcaaagcttgcctcaggaagtc 448 ||||| ||||| ||| | |||||||| Sbjct: 2046 atctttaaagcctgcttgaggaagtc 2071 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 491 acacccaagggttcagcggtgctgatatcactgaaatttgccagcg 536 |||| ||||||||||| ||||||||||| || ||||| |||||||| Sbjct: 2113 acactcaagggttcagtggtgctgatattacagaaatatgccagcg 2158
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 168 bits (85), Expect = 1e-38 Identities = 257/313 (82%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 231 gatgctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatg 290 |||||||| ||||| || |||||||| |||||||||| || || ||||||||||| ||| Sbjct: 49895 gatgctggtggtgcagcagatagagtattgaaccagcttcttacggagatggatggaatg 49954 Query: 291 aatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccct 350 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| || || ||| Sbjct: 49955 aatgctaagaagacggtcttcatcatcggagctacaaacagaccagacattattgatcct 50014 Query: 351 gccctgcttaggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgat 410 || || || | || || ||||| |||||||| |||||||| ||||||||||||| || Sbjct: 50015 gcacttctgcgtcctggtcgtctcgatcagctcatctacattcctcttcctgatgaggag 50074 Query: 411 tcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgat 470 || | |||||||||| || ||||| | ||||| || ||| |||| || ||| |||| Sbjct: 50075 tctcgttaccagatctttaagtcttgcttgaggaaatcacctgtggcgaaagatgttga- 50133 Query: 471 cctgagtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttg 530 |||||| |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 50134 cctgagggctcttgctaagtacacccaaggcttcagtggtgcggacatcacagagatttg 50193 Query: 531 ccagcgtgcttgc 543 ||||||| ||||| Sbjct: 50194 ccagcgttcttgc 50206 Score = 103 bits (52), Expect = 6e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||| ||||| || ||| | ||||| ||||| || || || |||||| Sbjct: 49573 ttctatggcccccctggttgtggaaagaccctcttggctaaggctattgcgaacgagtgt 49632 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||| ||||||||||| |||||||| || || ||||||||||| |||||| Sbjct: 49633 caagccaacttcattagtatcaagggtcctgagctcctcacaatgtggtttggagagagt 49692 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 || || |||||| | ||||| ||||||||||| Sbjct: 49693 gaagccaatgtgagagagatattcgacaaggc 49724
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 165 bits (83), Expect = 2e-37 Identities = 277/341 (81%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| ||||| |||||| | |||||||| || || || || ||||| Sbjct: 1709 ttctacggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgc 1768 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| ||||||||| ||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1769 caagctaatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagt 1828 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || ||||| ||||| || ||||||||||| | || || |||||||| || ||| Sbjct: 1829 gaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttc 1888 Query: 183 tttgatgaacttgactcgattgctacccagagagga---agcagcagtggggatgctgga 239 |||||||| || ||||| ||||| || ||||||||| | || |||| |||| || Sbjct: 1889 tttgatgagctcgactccattgcaactcagagaggaggtggaagtggtggcgatggaggt 1948 Query: 240 ggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaag 299 |||||||| || ||||| |||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1949 ggtgctgcggacagagtcttgaaccagcttttgactgagatggacggaatgaatgccaag 2008 Query: 300 aaaaccgtcttcatcattggtgctaccaacaggccagacat 340 ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 2009 aaaaccgtcttcatcatcggagctaccaacagacctgacat 2049 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 2184 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 2243 Query: 536 gtgcttgc 543 | |||||| Sbjct: 2244 gagcttgc 2251
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 165 bits (83), Expect = 2e-37 Identities = 277/341 (81%), Gaps = 3/341 (0%) Strand = Plus / Minus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| ||||| |||||| | |||||||| || || || || ||||| Sbjct: 44854 ttctacggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgc 44795 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| ||||||||| ||||||| || ||||| || || ||||||||||| |||||| Sbjct: 44794 caagctaatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagt 44735 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || ||||| ||||| || ||||||||||| | || || |||||||| || ||| Sbjct: 44734 gaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttc 44675 Query: 183 tttgatgaacttgactcgattgctacccagagagga---agcagcagtggggatgctgga 239 |||||||| || ||||| ||||| || ||||||||| | || |||| |||| || Sbjct: 44674 tttgatgagctcgactccattgcaactcagagaggaggtggaagtggtggcgatggaggt 44615 Query: 240 ggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaag 299 |||||||| || ||||| |||||||||| ||||||||||||| || |||||||| ||| Sbjct: 44614 ggtgctgcggacagagtcttgaaccagcttttgactgagatggacggaatgaatgccaag 44555 Query: 300 aaaaccgtcttcatcattggtgctaccaacaggccagacat 340 ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 44554 aaaaccgtcttcatcatcggagctaccaacagacctgacat 44514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 44379 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 44320 Query: 536 gtgcttgc 543 | |||||| Sbjct: 44319 gagcttgc 44312
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 165 bits (83), Expect = 2e-37 Identities = 277/341 (81%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| ||||| |||||| | |||||||| || || || || ||||| Sbjct: 1665 ttctacggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgc 1724 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| ||||||||| ||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1725 caagctaatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagt 1784 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || ||||| ||||| || ||||||||||| | || || |||||||| || ||| Sbjct: 1785 gaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttc 1844 Query: 183 tttgatgaacttgactcgattgctacccagagagga---agcagcagtggggatgctgga 239 |||||||| || ||||| ||||| || ||||||||| | || |||| |||| || Sbjct: 1845 tttgatgagctcgactccattgcaactcagagaggaggtggaagtggtggcgatggaggt 1904 Query: 240 ggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaag 299 |||||||| || ||||| |||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1905 ggtgctgcggacagagtcttgaaccagcttttgactgagatggacggaatgaatgccaag 1964 Query: 300 aaaaccgtcttcatcattggtgctaccaacaggccagacat 340 ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 1965 aaaaccgtcttcatcatcggagctaccaacagacctgacat 2005 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 2140 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 2199 Query: 536 gtgcttgc 543 | |||||| Sbjct: 2200 gagcttgc 2207
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 165 bits (83), Expect = 2e-37 Identities = 277/341 (81%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| ||||| |||||| | |||||||| || || || || ||||| Sbjct: 1699 ttctacggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgc 1758 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| ||||||||| ||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1759 caagctaatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagt 1818 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || ||||| ||||| || ||||||||||| | || || |||||||| || ||| Sbjct: 1819 gaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttc 1878 Query: 183 tttgatgaacttgactcgattgctacccagagagga---agcagcagtggggatgctgga 239 |||||||| || ||||| ||||| || ||||||||| | || |||| |||| || Sbjct: 1879 tttgatgagctcgactccattgcaactcagagaggaggtggaagtggtggcgatggaggt 1938 Query: 240 ggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaag 299 |||||||| || ||||| |||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1939 ggtgctgcggacagagtcttgaaccagcttttgactgagatggacggaatgaatgccaag 1998 Query: 300 aaaaccgtcttcatcattggtgctaccaacaggccagacat 340 ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 1999 aaaaccgtcttcatcatcggagctaccaacagacctgacat 2039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 2174 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 2233 Query: 536 gtgcttgc 543 | |||||| Sbjct: 2234 gagcttgc 2241
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 165 bits (83), Expect = 2e-37 Identities = 277/341 (81%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| ||||| |||||| | |||||||| || || || || ||||| Sbjct: 1648 ttctacggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgc 1707 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || ||||| ||||||||| ||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1708 caagctaatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagt 1767 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || ||||| ||||| || ||||||||||| | || || |||||||| || ||| Sbjct: 1768 gaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttc 1827 Query: 183 tttgatgaacttgactcgattgctacccagagagga---agcagcagtggggatgctgga 239 |||||||| || ||||| ||||| || ||||||||| | || |||| |||| || Sbjct: 1828 tttgatgagctcgactccattgcaactcagagaggaggtggaagtggtggcgatggaggt 1887 Query: 240 ggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaag 299 |||||||| || ||||| |||||||||| ||||||||||||| || |||||||| ||| Sbjct: 1888 ggtgctgcggacagagtcttgaaccagcttttgactgagatggacggaatgaatgccaag 1947 Query: 300 aaaaccgtcttcatcattggtgctaccaacaggccagacat 340 ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 1948 aaaaccgtcttcatcatcggagctaccaacagacctgacat 1988 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 2123 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 2182 Query: 536 gtgcttgc 543 | |||||| Sbjct: 2183 gagcttgc 2190
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 119 bits (60), Expect = 1e-23 Identities = 273/344 (79%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||||||| | || ||||| || || ||||| ||||| Sbjct: 1650 ttctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgc 1709 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||||||| |||||||||| ||||| || || ||||||||||| || ||| Sbjct: 1710 caagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagt 1769 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || || || || || || || ||||||||| | || || || ||||| || || Sbjct: 1770 gaagccaacgtccgagaaatctttgacaaggctcgtcaatctgctccttgtgttctgttt 1829 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 || ||||| || ||||| |||||||| |||||||| | |||| || ||||| || ||| Sbjct: 1830 ttcgatgagctagactccattgctactcagagagggaacagcgcgggtgatgccggcggt 1889 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||| |||||| |||| ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1890 gcagctgacagagtgttgaatcagcttttgacagaaatggatggaatgaatgcaaagaag 1949 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcataga 346 || || ||||| ||||| || || ||||| || || |||||||| Sbjct: 1950 acggtattcattattggagcaactaacagaccggatatcataga 1993 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 aagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttgc 543 |||||||| || || ||||| |||||||||||||| || || |||||| | |||||| Sbjct: 2133 aagtacactcagggattcagtggtgctgatatcaccgagatctgccagagagcttgc 2189
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 119 bits (60), Expect = 1e-23 Identities = 273/344 (79%) Strand = Plus / Minus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||||||| | || ||||| || || ||||| ||||| Sbjct: 24886 ttctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgc 24827 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||||||| |||||||||| ||||| || || ||||||||||| || ||| Sbjct: 24826 caagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagt 24767 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || || || || || || || ||||||||| | || || || ||||| || || Sbjct: 24766 gaagccaacgtccgagaaatctttgacaaggctcgtcaatctgctccttgtgttctgttt 24707 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 || ||||| || ||||| |||||||| |||||||| | |||| || ||||| || ||| Sbjct: 24706 ttcgatgagctagactccattgctactcagagagggaacagcgcgggtgatgccggcggt 24647 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||| |||||| |||| ||||| |||| || |||||||| |||||||| ||||| Sbjct: 24646 gcagctgacagagtgttgaatcagcttttgacagaaatggatggaatgaatgcaaagaag 24587 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcataga 346 || || ||||| ||||| || || ||||| || || |||||||| Sbjct: 24586 acggtattcattattggagcaactaacagaccggatatcataga 24543 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 487 aagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttgc 543 |||||||| || || ||||| |||||||||||||| || || |||||| | |||||| Sbjct: 24403 aagtacactcagggattcagtggtgctgatatcaccgagatctgccagagagcttgc 24347
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 119 bits (60), Expect = 1e-23 Identities = 273/344 (79%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||||||| | || ||||| || || ||||| ||||| Sbjct: 1555 ttctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgc 1614 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||||||| |||||||||| ||||| || || ||||||||||| || ||| Sbjct: 1615 caagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagt 1674 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || || || || || || || ||||||||| | || || || ||||| || || Sbjct: 1675 gaagccaacgtccgagaaatctttgacaaggctcgtcaatctgctccttgtgttctgttt 1734 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 || ||||| || ||||| |||||||| |||||||| | |||| || ||||| || ||| Sbjct: 1735 ttcgatgagctagactccattgctactcagagagggaacagcgcgggtgatgccggcggt 1794 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||| |||||| |||| ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1795 gcagctgacagagtgttgaatcagcttttgacagaaatggatggaatgaatgcaaagaag 1854 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcataga 346 || || ||||| ||||| || || ||||| || || |||||||| Sbjct: 1855 acggtattcattattggagcaactaacagaccggatatcataga 1898 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 aagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttgc 543 |||||||| || || ||||| |||||||||||||| || || |||||| | |||||| Sbjct: 2038 aagtacactcagggattcagtggtgctgatatcaccgagatctgccagagagcttgc 2094
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 119 bits (60), Expect = 1e-23 Identities = 273/344 (79%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||||||| | || ||||| || || ||||| ||||| Sbjct: 1650 ttctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgc 1709 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||||||| |||||||||| ||||| || || ||||||||||| || ||| Sbjct: 1710 caagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagt 1769 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || || || || || || || ||||||||| | || || || ||||| || || Sbjct: 1770 gaagccaacgtccgagaaatctttgacaaggctcgtcaatctgctccttgtgttctgttt 1829 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 || ||||| || ||||| |||||||| |||||||| | |||| || ||||| || ||| Sbjct: 1830 ttcgatgagctagactccattgctactcagagagggaacagcgcgggtgatgccggcggt 1889 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||| |||||| |||| ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1890 gcagctgacagagtgttgaatcagcttttgacagaaatggatggaatgaatgcaaagaag 1949 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcataga 346 || || ||||| ||||| || || ||||| || || |||||||| Sbjct: 1950 acggtattcattattggagcaactaacagaccggatatcataga 1993 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 aagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttgc 543 |||||||| || || ||||| |||||||||||||| || || |||||| | |||||| Sbjct: 2133 aagtacactcagggattcagtggtgctgatatcaccgagatctgccagagagcttgc 2189
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 119 bits (60), Expect = 1e-23 Identities = 273/344 (79%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||||||| | || ||||| || || ||||| ||||| Sbjct: 1643 ttctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgc 1702 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 || || |||||||||||| |||||||||| ||||| || || ||||||||||| || ||| Sbjct: 1703 caagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagt 1762 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 || || || || || || || || ||||||||| | || || || ||||| || || Sbjct: 1763 gaagccaacgtccgagaaatctttgacaaggctcgtcaatctgctccttgtgttctgttt 1822 Query: 183 tttgatgaacttgactcgattgctacccagagaggaagcagcagtggggatgctggaggt 242 || ||||| || ||||| |||||||| |||||||| | |||| || ||||| || ||| Sbjct: 1823 ttcgatgagctagactccattgctactcagagagggaacagcgcgggtgatgccggcggt 1882 Query: 243 gctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaa 302 || ||||| |||||| |||| ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1883 gcagctgacagagtgttgaatcagcttttgacagaaatggatggaatgaatgcaaagaag 1942 Query: 303 accgtcttcatcattggtgctaccaacaggccagacatcataga 346 || || ||||| ||||| || || ||||| || || |||||||| Sbjct: 1943 acggtattcattattggagcaactaacagaccggatatcataga 1986 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 aagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgcttgc 543 |||||||| || || ||||| |||||||||||||| || || |||||| | |||||| Sbjct: 2126 aagtacactcagggattcagtggtgctgatatcaccgagatctgccagagagcttgc 2182
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 54 aatgagtgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt 113 |||||||| ||||| ||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 1017 aatgagtgccaggccaacttcatcagcgtcaaggggcctgagctgctcaccatgtggttc 1076 Query: 114 ggtgagagtgaggctaatgtgcgtgagattttcgacaaggct 155 |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 1077 ggtgagagtgaggccaacgtgcgtgagatcctcgacaaggct 1118 Score = 113 bits (57), Expect = 6e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 246 gctgatagagtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaacc 305 |||||| | |||||||||||| ||||||| |||||||| |||||||| | ||||| ||| Sbjct: 1209 gctgatcgcgtgctgaaccagatgctgacggagatggacggcatgaactccaagaagacc 1268 Query: 306 gtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcca 365 |||||||||||||| || ||||||||||| |||||||| ||| | |||||||| |||| Sbjct: 1269 gtcttcatcattggagcaaccaacaggccggacatcatcgactccgccctgctgcggcct 1328 Query: 366 gggcgtcttgatcagcttatctacatccc 394 || || || || ||||| ||||||||||| Sbjct: 1329 ggccgactggaccagctgatctacatccc 1357
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA Length = 3258 Score = 113 bits (57), Expect = 6e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| |||||||| ||||||| || || || |||||||| Sbjct: 1806 gttctatggacctcctggctgtgggaaaaccttgctggccaaagccattgctaatgagtg 1865 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1866 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggagagtc 1925 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggc 154 |||||| || ||| | || || ||||||||||| Sbjct: 1926 tgaggccaacgtgagggaaatcttcgacaaggc 1958
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| ||||||||| ||||||| || || || ||||| || Sbjct: 1757 ttctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgc 1816 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1817 caggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| ||||||||| |||| |||||||| || ||||| | || || || || ||| Sbjct: 2066 atcattggagctaccaaccggcctgacatcattgatcctgctatcctaagacctggccgt 2125 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| || || ||||| |||||||||| Sbjct: 2126 cttgatcagctcatttatatcccacttcctgatg 2159
>gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 113 bits (57), Expect = 6e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| |||||||| ||||||| || || || |||||||| Sbjct: 1806 gttctatggacctcctggctgtgggaaaaccttgctggccaaagccattgctaatgagtg 1865 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1866 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggagagtc 1925 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggc 154 |||||| || ||| | || || ||||||||||| Sbjct: 1926 tgaggccaacgtgagggaaatcttcgacaaggc 1958
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| ||||||||| ||||||| || || || ||||| || Sbjct: 1789 ttctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgc 1848 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1849 caggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1901 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| ||||||||| |||| |||||||| || ||||| | || || || || ||| Sbjct: 2098 atcattggagctaccaaccggcctgacatcattgatcctgctatcctaagacctggccgt 2157 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| || || ||||| |||||||||| Sbjct: 2158 cttgatcagctcatttatatcccacttcctgatg 2191
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| ||||||||| ||||||| || || || ||||| || Sbjct: 1757 ttctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgc 1816 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1817 caggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| ||||||||| |||| |||||||| || ||||| | || || || || ||| Sbjct: 2066 atcattggagctaccaaccggcctgacatcattgatcctgctatcctaagacctggccgt 2125 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| || || ||||| |||||||||| Sbjct: 2126 cttgatcagctcatttatatcccacttcctgatg 2159
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1823 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1882 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1883 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1942 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1943 gaggccaatgtccgggaaatttttgacaaggc 1974 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2132 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2191 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2192 ctagatcagctcatttatatcccacttcctgatg 2225
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1923 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1924 gaggccaatgtccgggaaatttttgacaaggc 1955 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1819 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1878 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1879 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1938 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1939 gaggccaatgtccgggaaatttttgacaaggc 1970 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1707 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1766 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1767 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1826 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1827 gaggccaatgtccgggaaatttttgacaaggc 1858 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2016 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2075 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2076 ctagatcagctcatttatatcccacttcctgatg 2109
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1768 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1827 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1828 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1887 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1888 gaggccaatgtccgggaaatttttgacaaggc 1919 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2077 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2136 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2137 ctagatcagctcatttatatcccacttcctgatg 2170
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1770 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1829 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1830 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1889 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1890 gaggccaatgtccgggaaatttttgacaaggc 1921 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2079 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2138 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2139 ctagatcagctcatttatatcccacttcctgatg 2172
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1806 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1865 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1866 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1925 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1926 gaggccaatgtccgggaaatttttgacaaggc 1957 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2115 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2174 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2175 ctagatcagctcatttatatcccacttcctgatg 2208
>dbj|AK159177.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007G04 product:valosin containing protein, full insert sequence Length = 2890 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1923 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1924 gaggccaatgtccgggaaatttttgacaaggc 1955
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1769 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1828 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1829 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1888 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1889 gaggccaatgtccgggaaatttttgacaaggc 1920 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2078 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2137 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2138 ctagatcagctcatttatatcccacttcctgatg 2171
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1823 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1882 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1883 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1942 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1943 gaggccaatgtccgggaaatttttgacaaggc 1974 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2132 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2191 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2192 ctagatcagctcatttatatcccacttcctgatg 2225
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1690 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1749 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1750 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1809 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1810 gaggccaatgtccgggaaatttttgacaaggc 1841 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 1999 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2058 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2059 ctagatcagctcatttatatcccacttcctgatg 2092
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1846 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1905 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1906 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1965 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1966 gaggccaatgtccgggaaatttttgacaaggc 1997 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2155 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2214 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2215 ctagatcagctcatttatatcccacttcctgatg 2248
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1847 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1906 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1907 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1966 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1967 gaggccaatgtccgggaaatttttgacaaggc 1998 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2156 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2215 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2216 ctagatcagctcatttatatcccacttcctgatg 2249
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1777 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1836 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1837 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1896 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1897 gaggccaatgtccgggaaatttttgacaaggc 1928 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2086 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2145 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2146 ctagatcagctcatttatatcccacttcctgatg 2179
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1769 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1828 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1829 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1888 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1889 gaggccaatgtccgggaaatttttgacaaggc 1920 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2078 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2137 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2138 ctagatcagctcatttatatcccacttcctgatg 2171
>dbj|AK010612.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030B05 product:transitional endoplasmic reticulum ATPase homolog [Sus scrofa domestica], full insert sequence Length = 1665 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 225 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 284 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 285 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 344 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 345 gaggccaatgtccgggaaatttttgacaaggc 376 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 534 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 593 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 594 ctagatcagctcatttatatcccacttcctgatg 627
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1381 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1440 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1441 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1500 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1501 gaggccaatgtccgggaaatttttgacaaggc 1532 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 1690 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 1749 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 1750 ctagatcagctcatttatatcccacttcctgatg 1783
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1804 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1863 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1864 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1923 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1924 gaggccaatgtccgggaaatttttgacaaggc 1955 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 2066 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 2125 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 2126 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 2185 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 2186 gaggccaatgtccgggaaatttttgacaaggc 2217 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2360 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2419 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2420 ctagatcagctcatttatatcccacttcctgatg 2453
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1706 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1765 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1766 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1825 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1826 gaggccaatgtccgggaaatttttgacaaggc 1857 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2015 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2074 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2075 ctagatcagctcatttatatcccacttcctgatg 2108
>dbj|AK212503.1| Mus musculus cDNA, clone:Y2G0125C20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 333 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 207 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 208 gaggccaatgtccgggaaatttttgacaaggc 239
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 2066 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 2125 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 2126 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 2185 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 2186 gaggccaatgtccgggaaatttttgacaaggc 2217 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2360 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2419 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2420 ctagatcagctcatttatatcccacttcctgatg 2453
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1779 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1838 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 1839 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 1898 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 1899 gaggccaatgtccgggaaatttttgacaaggc 1930 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2088 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2147 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2148 ctagatcagctcatttatatcccacttcctgatg 2181
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 123385 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 123326 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 123325 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 123266 Query: 123 gaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||| || || ||||| |||||||| Sbjct: 123265 gaggccaatgtccgggaaatttttgacaaggc 123234 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 123091 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 123032 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 123031 ctagatcagctcatttatatcccacttcctgatg 122998
>dbj|AK132843.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435I17 product:hypothetical protein, full insert sequence Length = 1018 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 892 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 833 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 832 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 773 Query: 123 gaggctaatgtgcgtgagattttcgacaagg 153 ||||| ||||| || || ||||| ||||||| Sbjct: 772 gaggccaatgtccgggaaatttttgacaagg 742
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 84860 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 84919 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 84920 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 84979 Query: 123 gaggctaatgtgcgtgagattttcgacaagg 153 ||||| ||||| || || ||||| ||||||| Sbjct: 84980 gaggccaatgtccgggaaatttttgacaagg 85010 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 85383 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 85442 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 85443 ctagatcagctcatttatatcccacttcctgatg 85476
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 109 bits (55), Expect = 1e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 119721 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 119662 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| || | Sbjct: 119661 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatct 119602 Query: 123 gaggctaatgtgcgtgagattttcgacaagg 153 ||||| ||||| || || ||||| ||||||| Sbjct: 119601 gaggccaatgtccgggaaatttttgacaagg 119571 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 119198 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 119139 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 119138 ctagatcagctcatttatatcccacttcctgatg 119105
>dbj|AK216904.1| Mus musculus cDNA, clone:Y2G0139P13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK216170.1| Mus musculus cDNA, clone:Y2G0137H05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgg 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK205742.1| Mus musculus cDNA, clone:Y2G0102K06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK204815.1| Mus musculus cDNA, clone:Y1G0149L07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK198469.1| Mus musculus cDNA, clone:Y1G0128E09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1060 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1119 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1120 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1179 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1180 tgaggccaatgt 1191 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 1367 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 1426 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 1427 cgtcttgatcagctcatctacatcccacttcctgatg 1463
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 3678 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 3737 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 3738 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 3797 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 3798 tgaggccaatgt 3809 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 3985 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 4044 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 4045 cgtcttgatcagctcatctacatcccacttcctgatg 4081
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1841 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1900 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1901 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1960 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1961 tgaggccaatgt 1972 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2148 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2207 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2208 cgtcttgatcagctcatctacatcccacttcctgatg 2244
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1757 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1816 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1817 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1876 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1877 tgaggccaatgt 1888 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2064 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2123 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2124 cgtcttgatcagctcatctacatcccacttcctgatg 2160
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1793 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1852 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1853 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1912 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1913 tgaggccaatgt 1924 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2100 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2159 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2160 cgtcttgatcagctcatctacatcccacttcctgatg 2196
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 30180 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 30121 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 30120 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 30061 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 30060 tgaggccaatgt 30049 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 29362 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 29303 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 29302 cgtcttgatcagctcatctacatcccacttcctgatg 29266
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 420 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 479 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 480 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 539 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 540 tgaggccaatgt 551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 727 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 786 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 787 cgtcttgatcagctcatctacatcccacttcctgatg 823
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1784 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1843 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1844 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1903 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1904 tgaggccaatgt 1915 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2091 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2150 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2151 cgtcttgatcagctcatctacatcccacttcctgatg 2187
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 40368 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 40309 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 40308 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 40249 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 40248 tgaggccaatgt 40237 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 39552 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 39493 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 39492 cgtcttgatcagctcatctacatcccacttcctgatg 39456
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 431 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 490 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 491 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 550 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 551 tgaggccaatgt 562 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 738 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 797 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||| ||||||||| ||||||||||| |||||||||| Sbjct: 798 cgtcctgatcagctcatctacatcccacttcctgatg 834
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1757 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1816 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1817 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1876 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1877 tgaggccaatgt 1888 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2064 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2123 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2124 cgtcttgatcagctcatctacatcccacttcctgatg 2160
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| |||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 1744 gttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatgaatg 1803 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1804 ccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttggggagtc 1863 Query: 122 tgaggctaatgt 133 |||||| ||||| Sbjct: 1864 tgaggccaatgt 1875 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccaggg 368 ||||||||||| ||||||||| |||| |||||||| || |||||| | || || || || Sbjct: 2051 ttcatcattggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggc 2110 Query: 369 cgtcttgatcagcttatctacatccctcttcctgatg 405 |||||||||||||| ||||||||||| |||||||||| Sbjct: 2111 cgtcttgatcagctcatctacatcccacttcctgatg 2147
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||||||||||||||| ||| | ||||| | |||||||||||| ||| Sbjct: 1633 aaccaggttctgactgagatggatggtatgggctccaagaagaacgtcttcatcatcggt 1692 Query: 321 gctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcag 380 || |||||||||||||||||| ||||| ||||| | || | ||||| ||||| |||||| Sbjct: 1693 gcaaccaacaggccagacatcgtagactctgccatcctacgtccaggacgtctagatcag 1752 Query: 381 cttatctacatccc 394 |||||||||||||| Sbjct: 1753 cttatctacatccc 1766 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 39 gccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagctg 98 |||||||| ||||| || ||||| ||||| ||||||||| ||||||||| || |||||| Sbjct: 1411 gccaaggccatcgccaacgagtgccaggccaacttcatctctatcaagggtccggagctg 1470 Query: 99 cttaccatgtggtt 112 || ||||||||||| Sbjct: 1471 ctcaccatgtggtt 1484 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gcaccatgtgtgctcttctttgatga 190 |||||||| ||||||||||||||||| Sbjct: 1537 gcaccatgcgtgctcttctttgatga 1562 Score = 40.1 bits (20), Expect = 7.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 480 tcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 |||||||||| |||||| || ||||| ||||||||| | || || || ||||||||||| Sbjct: 1851 tcttgccaaggtcacccagggattcagtggtgctgatctgacagagatctgccagcgtgc 1910
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||||||||||||||| ||| | ||||| | |||||||||||| ||| Sbjct: 1633 aaccaggttctgactgagatggatggtatgggctccaagaagaacgtcttcatcatcggt 1692 Query: 321 gctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtcttgatcag 380 || |||||||||||||||||| ||||| ||||| | || | ||||| ||||| |||||| Sbjct: 1693 gcaaccaacaggccagacatcgtagactctgccatcctacgtccaggacgtctagatcag 1752 Query: 381 cttatctacatccc 394 |||||||||||||| Sbjct: 1753 cttatctacatccc 1766 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 39 gccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagctg 98 |||||||| ||||| || ||||| ||||| ||||||||| ||||||||| || |||||| Sbjct: 1411 gccaaggccatcgccaacgagtgccaggccaacttcatctctatcaagggtccggagctg 1470 Query: 99 cttaccatgtggtt 112 || ||||||||||| Sbjct: 1471 ctcaccatgtggtt 1484 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gcaccatgtgtgctcttctttgatga 190 |||||||| ||||||||||||||||| Sbjct: 1537 gcaccatgcgtgctcttctttgatga 1562 Score = 40.1 bits (20), Expect = 7.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 480 tcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 |||||||||| |||||| || ||||| ||||||||| | || || || ||||||||||| Sbjct: 1851 tcttgccaaggtcacccagggattcagtggtgctgatctgacagagatctgccagcgtgc 1910
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 1803 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 1862 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 1863 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 1912 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2111 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2170 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 2171 ctagatcagctcatttatatcccacttcctgatg 2204
>dbj|AK215003.1| Mus musculus cDNA, clone:Y2G0133K12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 197
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1682 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1741 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1742 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1794
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1757 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1816 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1817 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1869
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1816 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1875 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1876 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1928
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || ||||||||||| |||||||| ||||||| || || || ||||| || Sbjct: 1814 ttctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgc 1873 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1874 caggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttgg 1926
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| |||||||| ||||||| || || || |||||||| Sbjct: 1718 ttctatggacctcctggctgtgggaaaaccttgctggccaaagccattgctaatgagtgc 1777 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 1778 caggccaacttcatctccatcaaaggtcctgagctgctcaccatgtggtttgg 1830 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| ||||||||||| |||||||||| Sbjct: 2087 cttgatcagctcatctacatcccacttcctgatg 2120
>dbj|AK214913.1| Mus musculus cDNA, clone:Y2G0133G06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatgcggtttgg 200
>dbj|AK186814.1| Mus musculus cDNA, clone:Y0G0138N13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 222 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||| ||| ||||||||| |||| || || || || ||||| || Sbjct: 89 ttctatggacctcctggctttgggaaaaccttactggctaaagccattgctaatgaatgc 148 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 149 caggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 201
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| |||||||| ||||||| || || || |||||||| Sbjct: 1724 ttctatggacctcctggctgtgggaaaaccttgctggccaaagccattgctaatgagtgc 1783 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 1784 caggccaacttcatctccatcaaaggtcctgagctgctcaccatgtggtttgg 1836 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| ||||||||||| |||||||||| Sbjct: 2093 cttgatcagctcatctacatcccacttcctgatg 2126
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| |||||||| ||||||| || || || |||||||| Sbjct: 1718 ttctatggacctcctggctgtgggaaaaccttgctggccaaagccattgctaatgagtgc 1777 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 1778 caggccaacttcatctccatcaaaggtcctgagctgctcaccatgtggtttgg 1830 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 ||||||||||| ||||||||||| |||||||||| Sbjct: 2087 cttgatcagctcatctacatcccacttcctgatg 2120
>gb|AY107375.1| Zea mays PCO097021 mRNA sequence Length = 711 Score = 95.6 bits (48), Expect = 1e-16 Identities = 103/120 (85%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 420 cagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgc 479 |||||||||||||| |||||||||||||||||| |||| ||||| |||| | || ||| Sbjct: 15 cagatcttcaaagcctgcctcaggaagtctcctgtggctaaggacgttga-cttgcatgc 73 Query: 480 tcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagcgtgc 539 |||||||||||||||||| || ||||| || || |||||||| || || ||||||||||| Sbjct: 74 tcttgccaagtacacccagggtttcagtggagcagatatcaccgagatctgccagcgtgc 133
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 1639 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 1698 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 1699 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 1758 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 1759 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 1818 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 1819 ctttgatgaattggactccattgcta 1844 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 1942 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 2001 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 2002 cggacgtttggaccaactcatctacatccc 2031
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 1615 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 1674 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 1675 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 1734 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 1735 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 1794 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 1795 ctttgatgaattggactccattgcta 1820 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 1918 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 1977 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 1978 cggacgtttggaccaactcatctacatccc 2007
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 1676 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 1735 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 1736 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 1795 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 1796 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 1855 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 1856 ctttgatgaattggactccattgcta 1881 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 1979 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 2038 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 2039 cggacgtttggaccaactcatctacatccc 2068
>ref|XM_692759.1| PREDICTED: Danio rerio similar to Valosin containing protein (LOC569377), mRNA Length = 1747 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 378 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 437 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 438 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 497 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 498 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 557 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 558 ctttgatgaattggactccattgcta 583 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 681 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 740 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 741 cggacgtttggaccaactcatctacatccc 770
>dbj|AK181023.1| Mus musculus cDNA, clone:Y0G0116K19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 287 Score = 91.7 bits (46), Expect = 2e-15 Identities = 98/114 (85%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| |||| || || || || ||||| || Sbjct: 153 ttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgc 212 Query: 63 caggctaacttcatcagtatcaagggacctgag-ctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 213 caggccaacttcatctccatcaagggtcctgagactgcttaccatgtggtttgg 266
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 1545 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 1604 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 1605 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 1664 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 1665 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 1724 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 1725 ctttgatgaattggactccattgcta 1750 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgcc 353 ||||||||||||||| || |||||||| ||||||||||| ||||||||| Sbjct: 1848 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgcc 1896
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 1639 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 1698 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 1699 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggagaatc 1758 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 ||||| ||||| ||||| || || ||||||||| | | | || || ||||||||||| Sbjct: 1759 agaggcgaatgtccgtgaaatctttgacaaggctcgtcaggctgctccttgtgtgctctt 1818 Query: 182 ctttgatgaacttgactcgattgcta 207 |||||||||| | ||||| ||||||| Sbjct: 1819 ctttgatgaattggactccattgcta 1844 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 1942 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 2001 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 2002 cggacgtttggaccaactcatctacatccc 2031
>dbj|AK189172.1| Mus musculus cDNA, clone:Y0G0148B22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 89.7 bits (45), Expect = 9e-15 Identities = 96/113 (84%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| |||||||||||||| ||||||||| ||| || || || || ||||| || Sbjct: 88 ttctatggacctcctggctgtgggaaaaccttactgggtaaagccattgctaatgaatgc 147 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 148 caggccaacttcatctccatcaagggtcctgagctgcttaccatttggtttgg 200
>gb|AY232675.1| Mirabilis jalapa CDC48-like protein mRNA, partial cds Length = 669 Score = 81.8 bits (41), Expect = 2e-12 Identities = 246/313 (78%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 231 gatgctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatg 290 |||||||| || |||||||| || || |||||||| || |||| || |||||||||||| Sbjct: 16 gatgctggtggcgctgctgacagggttctgaaccaacttttgacagaaatggatggcatg 75 Query: 291 aatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccct 350 ||| ||||| || || ||||| |||||||| || ||||| || || || || || || Sbjct: 76 tctgcaaagaagacagtgttcattattggtgccacaaacagacctgatattattgatcca 135 Query: 351 gccctgcttaggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgat 410 ||||| || | || || ||||||||||| ||||||||||||||| | || |||| ||| Sbjct: 136 gcccttctgcgacctggccgtcttgatcaacttatctacatccctttaccagatgaggat 195 Query: 411 tcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgat 470 || | |||||||| ||||| || | | |||||||||||| | || || ||| ||||| Sbjct: 196 tctcgtcaccagattttcaaggcagccttgaggaagtctcctattgctaaagatgttgat 255 Query: 471 cctgagtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttg 530 | || || ||||| || ||||| || || ||||||||||| |||||||| ||||| || Sbjct: 256 -attagggcacttgctaaatacactcagggtttcagcggtgcagatatcaccgaaatatg 314 Query: 531 ccagcgtgcttgc 543 ||| ||||||||| Sbjct: 315 ccaacgtgcttgc 327
>ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2547 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| |||| ||||||||||| |||||||| || |||| Sbjct: 1616 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 1675 Query: 97 tgcttaccatgtggtttggtgagagtgagg 126 |||| ||||||||||| || ||||| |||| Sbjct: 1676 tgctcaccatgtggttcggcgagagcgagg 1705 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 255 gtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatc 314 ||||| ||||||||||| || |||||||| ||||| || || ||||| || || ||| || Sbjct: 1834 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 1893 Query: 315 attggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtctt 374 || || || |||||| |||| |||||||| ||||| || |||| |||| || || || Sbjct: 1894 atcggcgccaccaaccggccggacatcatcgacccggcgatgctccggccgggccgcctc 1953 Query: 375 gatcagcttatctacatccc 394 || ||||| ||||||||||| Sbjct: 1954 gaccagctcatctacatccc 1973
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 149780 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 149721 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 149720 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttgg 149667 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 149327 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 149268 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 149267 cggacgtttggaccaactcatctacatccc 149238 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 171 tgtgtgctcttctttgatgaacttgactcgattgcta 207 ||||||||||||||||||||| | ||||| ||||||| Sbjct: 149461 tgtgtgctcttctttgatgaattggactccattgcta 149425
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | |||||||||| ||||| |||||||| Sbjct: 132902 gttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatgagtg 132961 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||||| ||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 132962 ccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttgg 133015 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 ||||||||||||||| || |||||||| ||||||||||| ||||||||| | || ||||| Sbjct: 133355 cgtcttcatcattggggccaccaacagaccagacatcattgaccctgccatcctcaggcc 133414 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || ||| | || || || ||||||||||| Sbjct: 133415 tggacgtttggaccaactcatctacatccc 133444 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 171 tgtgtgctcttctttgatgaacttgactcgattgcta 207 ||||||||||||||||||||| | ||||| ||||||| Sbjct: 133221 tgtgtgctcttctttgatgaattggactccattgcta 133257
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| |||| ||||||||||| |||||||| || |||| Sbjct: 19750766 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 19750707 Query: 97 tgcttaccatgtggtttggtgagagtgagg 126 |||| ||||||||||| || ||||| |||| Sbjct: 19750706 tgctcaccatgtggttcggcgagagcgagg 19750677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 255 gtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatc 314 ||||| ||||||||||| || |||||||| ||||| || || ||||| || || ||| || Sbjct: 19750548 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 19750489 Query: 315 attggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtctt 374 || || || |||||| |||| |||||||| ||||| || |||| |||| || || || Sbjct: 19750488 atcggcgccaccaaccggccggacatcatcgacccggcgatgctccggccgggccgcctc 19750429 Query: 375 gatcagcttatctacatccc 394 || ||||| ||||||||||| Sbjct: 19750428 gaccagctcatctacatccc 19750409
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| |||| ||||||||||| |||||||| || |||| Sbjct: 79717 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 79658 Query: 97 tgcttaccatgtggtttggtgagagtgagg 126 |||| ||||||||||| || ||||| |||| Sbjct: 79657 tgctcaccatgtggttcggcgagagcgagg 79628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 255 gtgctgaaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatc 314 ||||| ||||||||||| || |||||||| ||||| || || ||||| || || ||| || Sbjct: 79499 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 79440 Query: 315 attggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgtctt 374 || || || |||||| |||| |||||||| ||||| || |||| |||| || || || Sbjct: 79439 atcggcgccaccaaccggccggacatcatcgacccggcgatgctccggccgggccgcctc 79380 Query: 375 gatcagcttatctacatccc 394 || ||||| ||||||||||| Sbjct: 79379 gaccagctcatctacatccc 79360
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 231 gatgctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatg 290 ||||||||||||||||| ||| | || | |||||| | || ||||| |||||||| ||| Sbjct: 1322 gatgctggaggtgctgccgatcgtgttatcaaccaggttctcactgaaatggatggtatg 1381 Query: 291 aatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccct 350 ||||| ||||||| ||| ||||| ||||| |||||||| | || || ||||| || || Sbjct: 1382 aatgccaagaaaaacgtgttcattattggagctaccaatcgtcctgatatcattgatcca 1441 Query: 351 gccctgcttaggccagggcgtcttgatcagcttatctacatccctcttcctga 403 || | ||| | ||||| ||||| |||||| | |||||||| ||||||||||| Sbjct: 1442 gctgttcttcgtccaggacgtctcgatcagttgatctacattcctcttcctga 1494 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 54 aatgagtgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||| || |||||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 1145 aatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatgtggtt 1203
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 231 gatgctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatg 290 ||||||||||||||||| ||| | || | |||||| | || ||||| |||||||| ||| Sbjct: 1878 gatgctggaggtgctgccgatcgtgttatcaaccaggttctcactgaaatggatggtatg 1937 Query: 291 aatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagacatcatagaccct 350 ||||| ||||||| ||| ||||| ||||| |||||||| | || || ||||| || || Sbjct: 1938 aatgccaagaaaaacgtgttcattattggagctaccaatcgtcctgatatcattgatcca 1997 Query: 351 gccctgcttaggccagggcgtcttgatcagcttatctacatccctcttcctga 403 || | ||| | ||||| ||||| |||||| | |||||||| ||||||||||| Sbjct: 1998 gctgttcttcgtccaggacgtctcgatcagttgatctacattcctcttcctga 2050 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 54 aatgagtgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||| || |||||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 1701 aatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatgtggtt 1759
>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full insert sequence Length = 3464 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| ||||| ||||||||| |||||||| || |||| Sbjct: 2475 tggccaaggcgatcgccaacgagtgccaggccaacttcatctcgatcaagggtcccgagc 2534 Query: 97 tgcttaccatgtggtttggtgag 119 |||| ||||||||||| |||||| Sbjct: 2535 tgctcaccatgtggttcggtgag 2557
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| || |||||||| ||||||||||| || |||| ||||| ||||| || |||||| Sbjct: 1653 ttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgccaacgagtgt 1712 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1713 caggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1762 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 276 gagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggcca 335 |||||||| |||||| || ||||| | |||||||||||| ||||| || ||||| || Sbjct: 1926 gagatggacggcatgggcgccaagaagaacgtcttcatcatcggtgccacaaacagaccg 1985 Query: 336 gacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctacatccc 394 |||||||| ||||| ||| | || | || || ||||| || ||||| ||||||||||| Sbjct: 1986 gacatcatcgacccggccatcctgcgtcccggccgtctggaccagctcatctacatccc 2044
>ref|XM_567564.1| Cryptococcus neoformans var. neoformans JEC21 MMS2 (CNJ02750) partial mRNA Length = 2673 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 273 actgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacagg 332 ||||| ||||| || ||||| || ||||| | |||||||||||||||||||||||||||| Sbjct: 1936 actgaaatggacggtatgaacgcgaagaagaacgtcttcatcattggtgctaccaacagg 1995 Query: 333 cc 334 || Sbjct: 1996 cc 1997 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| ||||||||||| |||||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 1666 ttctacggtcctcctggtaccggtaaaacgttgttggctaaggctatcgccaatgaatgt 1725 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 || || ||||||||| |||||| || |||||||| | ||||||||||| Sbjct: 1726 caagcgaacttcatctctatcaaaggtcctgagcttttgaccatgtggtt 1775 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 gggcgtcttgatcagcttatctacatccc 394 ||||| ||||||||||| ||||||||||| Sbjct: 2029 gggcgacttgatcagctgatctacatccc 2057
>ref|XM_752110.1| Ustilago maydis 521 hypothetical protein (UM01056.1) partial mRNA Length = 2469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 81 atcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgag 140 |||||||| ||||||||||| ||||||||||| |||||| |||||||| ||||| || Sbjct: 1621 atcaagggtcctgagctgctcaccatgtggttcggtgagtcggaggctaacgtgcgagac 1680 Query: 141 attttcgacaaggc 154 ||||||||||||| Sbjct: 1681 gttttcgacaaggc 1694 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaac 329 ||||||||||||||||||||||||| Sbjct: 1845 cgtcttcatcattggtgctaccaac 1869
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||| || |||||||| ||||||||||| || |||| ||||| ||||| || |||||| Sbjct: 1628 ttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgccaacgagtgt 1687 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 112 ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1688 caggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1737 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 276 gagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggcca 335 |||||||| |||||| || ||||| | |||||||||||| ||||| || ||||| || Sbjct: 1901 gagatggacggcatgggcgccaagaagaacgtcttcatcatcggtgccacaaacagaccg 1960 Query: 336 gacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctacatccc 394 |||||||| ||||| ||| | || | || || ||||| || ||||| ||||||||||| Sbjct: 1961 gacatcatcgacccggccatcctgcgtcccggccgtctggaccagctcatctacatccc 2019
>ref|XM_428317.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC430766), partial mRNA Length = 1516 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||| ||||||||||||||| | ||||| | ||||||||||| ||| Sbjct: 903 aaccagatcctgacagagatggatggcatgtccaccaagaagaatgtcttcatcatcggt 962 Query: 321 gctaccaacaggccagacatcatagaccc 349 || |||||||||||||||||||| ||||| Sbjct: 963 gccaccaacaggccagacatcattgaccc 991 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 81 atcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgag 140 ||||||||||| || ||||||||||||||||||| || ||| || |||||||| ||| Sbjct: 723 atcaagggaccagaattgcttaccatgtggtttggagaatctgaagccaatgtgcgcgag 782 Query: 141 attttcgacaaggc 154 || || |||||||| Sbjct: 783 atctttgacaaggc 796
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||| ||||||||||| ||| | ||||| | ||| |||||||| ||| Sbjct: 1842 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 1901 Query: 321 gctaccaacaggccagacatcatagaccc 349 ||||||||||||||||||||||| ||||| Sbjct: 1902 gctaccaacaggccagacatcattgaccc 1930 Score = 48.1 bits (24), Expect = 0.030 Identities = 159/204 (77%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || |||||||||||||| || | ||||||| || || || || || || Sbjct: 1583 gttctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatg 1642 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||| |||||||| || || |||| |||||||||||||| ||| Sbjct: 1643 ccaggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttggagagtc 1702 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 || || |||||||| ||||| || |||||||| | |||| || ||||||||||| Sbjct: 1703 agaagccaatgtgcgcgagatctttgacaaggcccgccaagcagccccttgtgtgctctt 1762 Query: 182 ctttgatgaacttgactcgattgc 205 ||||||||| || ||||| ||||| Sbjct: 1763 ctttgatgagctggactccattgc 1786
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||| ||||||||||| ||| | ||||| | ||| |||||||| ||| Sbjct: 1956 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 2015 Query: 321 gctaccaacaggccagacatcatagaccc 349 ||||||||||||||||||||||| ||||| Sbjct: 2016 gctaccaacaggccagacatcattgaccc 2044 Score = 48.1 bits (24), Expect = 0.030 Identities = 159/204 (77%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || |||||||||||||| || | ||||||| || || || || || || Sbjct: 1697 gttctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatg 1756 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||| |||||||| || || |||| |||||||||||||| ||| Sbjct: 1757 ccaggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttggagagtc 1816 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 || || |||||||| ||||| || |||||||| | |||| || ||||||||||| Sbjct: 1817 agaagccaatgtgcgcgagatctttgacaaggcccgccaagcagccccttgtgtgctctt 1876 Query: 182 ctttgatgaacttgactcgattgc 205 ||||||||| || ||||| ||||| Sbjct: 1877 ctttgatgagctggactccattgc 1900
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||| | ||||| ||||||||||| ||| | ||||| | ||| |||||||| ||| Sbjct: 1906 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 1965 Query: 321 gctaccaacaggccagacatcatagaccc 349 ||||||||||||||||||||||| ||||| Sbjct: 1966 gctaccaacaggccagacatcattgaccc 1994 Score = 48.1 bits (24), Expect = 0.030 Identities = 159/204 (77%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || |||||||||||||| || | ||||||| || || || || || || Sbjct: 1647 gttctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatg 1706 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||| |||||||| |||||||| || || |||| |||||||||||||| ||| Sbjct: 1707 ccaggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttggagagtc 1766 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctctt 181 || || |||||||| ||||| || |||||||| | |||| || ||||||||||| Sbjct: 1767 agaagccaatgtgcgcgagatctttgacaaggcccgccaagcagccccttgtgtgctctt 1826 Query: 182 ctttgatgaacttgactcgattgc 205 ||||||||| || ||||| ||||| Sbjct: 1827 ctttgatgagctggactccattgc 1850
>ref|XM_631818.1| Dictyostelium discoideum cell division cycle protein 48 (DDB0191154), partial mRNA Length = 2382 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 273 actgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacagg 332 ||||| |||||||| ||||| || ||||| | ||| |||||||||||||||||||| || Sbjct: 1810 actgaaatggatggtatgaacgccaagaagaacgttttcatcattggtgctaccaataga 1869 Query: 333 ccagacatcat 343 ||||| ||||| Sbjct: 1870 ccagatatcat 1880 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgtcag 65 |||||||| || || |||||||| || ||||| |||||||| ||||| || || ||||| Sbjct: 1543 tatggtccaccaggttgtggtaagactttattagccaaggccatcgccaacgaatgtcaa 1602 Query: 66 gctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 || || |||||| |||||| || || || || | |||||||||||||||||| Sbjct: 1603 gccaatttcatctctatcaaaggtccagaactcttaaccatgtggtttggtgag 1656
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| ||||| ||||||||| ||||| || || ||| Sbjct: 1423 tggccaaggccatcgccaacgagtgccaggccaacttcatctccatcaaagggcccgagt 1482 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggct 155 |||| ||||||||||| || ||| |||||| ||||| || ||||| || ||||||||| Sbjct: 1483 tgctcaccatgtggttcggcgagtctgaggccaatgtccgagagatctttgacaaggct 1541 Score = 44.1 bits (22), Expect = 0.47 Identities = 73/90 (81%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 |||||||||||| || || ||||||||||| || ||||| ||||| ||| | || ||||| Sbjct: 1691 cgtcttcatcatcggcgccaccaacaggcctgatatcatcgacccggccatcctgaggcc 1750 Query: 365 agggcgtcttgatcagcttatctacatccc 394 || | || || ||||| ||||||||||| Sbjct: 1751 cggcagactggaccagctcatctacatccc 1780
>gb|BC114306.1| Danio rerio zgc:136908, mRNA (cDNA clone MGC:136908 IMAGE:7993906), complete cds Length = 2707 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 |||||| ||||||||||| || |||||||| || ||||| || |||||| | || ||||| Sbjct: 1912 cgtctttatcattggtgccactaacaggcctgatatcattgatcctgccattctaaggcc 1971 Query: 365 agggcgtcttgatcagcttatctacatccctcttcctga 403 || ||| | ||||||||||| || |||||||| ||||| Sbjct: 1972 tggtcgtttggatcagcttatttatatccctctgcctga 2010
>ref|NM_001039928.1| Danio rerio zgc:136908 (zgc:136908), mRNA Length = 2707 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggcc 364 |||||| ||||||||||| || |||||||| || ||||| || |||||| | || ||||| Sbjct: 1912 cgtctttatcattggtgccactaacaggcctgatatcattgatcctgccattctaaggcc 1971 Query: 365 agggcgtcttgatcagcttatctacatccctcttcctga 403 || ||| | ||||||||||| || |||||||| ||||| Sbjct: 1972 tggtcgtttggatcagcttatttatatccctctgcctga 2010
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||||||||||||||||||||||| |||| | ||||| | ||| ||||||||||| Sbjct: 1913 aaccagctgctgactgagatggatggaatgagctcaaagaagaacgtgttcatcattgga 1972 Query: 321 gctaccaacaggccagacatcat 343 || || ||||| || |||||||| Sbjct: 1973 gccacgaacagacctgacatcat 1995
>gb|U83085.2|DDU83085 Dictyostelium discoideum cell division cycle protein 48 (cdcD) mRNA, complete cds Length = 2517 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 273 actgagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacagg 332 ||||| |||||||| ||||| || ||||| | ||| |||||||||||||||||||| || Sbjct: 1835 actgaaatggatggtatgaacgccaagaagaacgttttcatcattggtgctaccaataga 1894 Query: 333 ccagacatcat 343 ||||| ||||| Sbjct: 1895 ccagatatcat 1905 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgtcag 65 |||||||| || || |||||||| || ||||| |||||||| ||||| || || ||||| Sbjct: 1568 tatggtccaccaggttgtggtaagactttattagccaaggccatcgccaacgaatgtcaa 1627 Query: 66 gctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 || || |||||| |||||| || || || || | |||||||||||||||||| Sbjct: 1628 gccaatttcatctctatcaaaggtccagaactcttaaccatgtggtttggtgag 1681
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggcc 334 |||||||||||||||||||||||||||||| Sbjct: 795647 cgtcttcatcattggtgctaccaacaggcc 795676 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 48 atcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatg 107 ||||| ||||| ||||| || ||||||||| |||||| || |||||||| | |||||| Sbjct: 795292 atcgccaatgaatgtcaagcgaacttcatctctatcaaaggtcctgagcttttgaccatg 795351 Query: 108 tggtt 112 ||||| Sbjct: 795352 tggtt 795356
>gb|DQ145271.1| Drosophila miranda neo-Y TER94 gene, partial sequence Length = 1221 Score = 60.0 bits (30), Expect = 8e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| ||||| || ||||| ||||| ||||||||| ||||||| || |||| Sbjct: 641 tggccaaggccatcgccaacgagtgccaggcaaacttcatctccgtcaaggggcccgagc 700 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| ||| || || ||||| || || ||||||||||| Sbjct: 701 tgctgaccatgtggttcggcgagtctgaagccaacgtgcgcgacatcttcgacaaggc 758
>gb|DQ145270.1| Drosophila miranda neo-X TER94 gene, partial sequence Length = 1221 Score = 60.0 bits (30), Expect = 8e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || |||| Sbjct: 641 tggccaaggccattgccaacgagtgccaggcaaacttcatctccgtcaaggggcccgagc 700 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||||||||| Sbjct: 701 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgacaaggc 758
>ref|XM_505319.1| Yarrowia lipolytica CLIB122, YALI0F12155g predicted mRNA Length = 2445 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||||||||||| |||||||| || ||||| || ||||| | ||| ||| ||||||| Sbjct: 1843 aaccagctgctgaccgagatggacggtatgaacgccaagaagaacgtgttcgtcattgga 1902 Query: 321 gctaccaacaggcc 334 ||||||||| |||| Sbjct: 1903 gctaccaaccggcc 1916
>dbj|AK209378.1| Mus musculus cDNA, clone:Y2G0114O17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 410 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 237 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>dbj|AK186028.1| Mus musculus cDNA, clone:Y0G0136A10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 399 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 237 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 60.0 bits (30), Expect = 8e-06 Identities = 132/166 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || |||| Sbjct: 1638 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1697 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggcta 156 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| |||||| Sbjct: 1698 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggctc 1757 Query: 157 gggggtcagcaccatgtgtgctcttctttgatgaacttgactcgat 202 | | | || || ||||||||||||||||| || || |||||||| Sbjct: 1758 gctcggcggctccttgtgtgctcttctttgacgagctggactcgat 1803
>emb|CT033065.1| Platynereis dumerilii EST IB0AAA27BE08EM1 Length = 895 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 |||||| || || ||||| |||||||| ||| | || |||||||| ||||| || ||||| Sbjct: 499 gttctacggcccccctggttgtggtaagaccctcttagccaaggccatcgccaacgagtg 558 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 115 ||| || || |||||| |||||||| |||||||| | |||||||||||||| Sbjct: 559 tcaagccaatttcatctccatcaagggccctgagctcttgaccatgtggtttgg 612 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 309 ttcatcattggtgctaccaacaggccagacatcatagaccctgcc 353 ||||||||||| || || ||||| || |||||||| ||||||||| Sbjct: 806 ttcatcattggagccacaaacagacctgacatcattgaccctgcc 850
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 261 aaccagctgctgactgagatggatggcatgaatgctaagaaaaccgtcttcatcattggt 320 |||||||||||||| |||||||| || ||||| || ||||| | ||| ||| ||||||| Sbjct: 1601457 aaccagctgctgaccgagatggacggtatgaacgccaagaagaacgtgttcgtcattgga 1601398 Query: 321 gctaccaacaggcc 334 ||||||||| |||| Sbjct: 1601397 gctaccaaccggcc 1601384
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 60.0 bits (30), Expect = 8e-06 Identities = 132/166 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || |||| Sbjct: 1681 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1740 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggcta 156 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| |||||| Sbjct: 1741 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggctc 1800 Query: 157 gggggtcagcaccatgtgtgctcttctttgatgaacttgactcgat 202 | | | || || ||||||||||||||||| || || |||||||| Sbjct: 1801 gctcggcggctccttgtgtgctcttctttgacgagctggactcgat 1846
>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence Length = 646 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 420 cagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatcctgagtgc 479 |||||||||||||| | ||| |||||||||| ||||||||||| |||| | ||| ||| Sbjct: 33 cagatcttcaaagcctctttcaagaagtctcctgtggccaaggatgttga-cttgaatgc 91 Query: 480 tcttgccaagtacacccaagggttcagcg 508 ||| ||||| |||||||| || ||||||| Sbjct: 92 tctcgccaaatacacccagggtttcagcg 120
>dbj|AK113049.1| Ciona intestinalis cDNA, clone:ciad002b13, full insert sequence Length = 2972 Score = 58.0 bits (29), Expect = 3e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||||||| || || || |||||||||||| | | ||||| || || || || ||||| Sbjct: 1639 gttctatgggccaccaggttgtggtaaaaccctccttgccaaagctattgccaacgagtg 1698 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||| || || |||||| |||||||| || ||| || | ||||||||||||||||| Sbjct: 1699 tcaagccaatttcatctccatcaagggtcccgagatgttgaccatgtggtttggtgaatc 1758 Query: 122 tgaggctaatgtgcgtgagattttcgacaaggc 154 |||||||||||| ||||| ||||||| ||||| Sbjct: 1759 tgaggctaatgtccgtgaagttttcgataaggc 1791
>ref|XM_960868.1| Encephalitozoon cuniculi GB-M1 ATPase (ECU01_1230) partial mRNA Length = 2343 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 247 ctgatagagtgctgaaccagctgctgactgagatggatgg 286 |||||||| |||||||||||||||| ||||||||||||| Sbjct: 1799 ctgatagaatgctgaaccagctgctatctgagatggatgg 1838
>ref|XM_747195.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09210) partial mRNA Length = 2355 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 69 aacttcatcagtatcaagggacctgagctgct 100 |||||||||||| ||||||||||||||||||| Sbjct: 1753 aacttcatcagtgtcaagggacctgagctgct 1784
>emb|Z49886.1|CEC06A1 Caenorhabditis elegans Cosmid C06A1, complete sequence Length = 20752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 279 atggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagac 338 |||||||| ||||| || ||||||| || |||||||| || ||||| ||||| || || Sbjct: 2018 atggatggaatgaacgcgaagaaaaatgtgttcatcatcggagctacaaacagacctgat 1959 Query: 339 atcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctacatccc 394 ||||| || || || | ||| | ||||| || ||||||||||||||||||||||| Sbjct: 1958 atcattgatccagctgttcttcgtccaggtcgccttgatcagcttatctacatccc 1903
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 247 ctgatagagtgctgaaccagctgctgactgagatggatgg 286 |||||||| |||||||||||||||| ||||||||||||| Sbjct: 147066 ctgatagaatgctgaaccagctgctatctgagatggatgg 147027
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL22-93-G21 Length = 697 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 476 gtgctcttgccaagtacacccaagggttcagcggtgctgatatcactgaaatttgccagc 535 |||| ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 74 gtgcacttgctaaatacactcagggtttcagtggtgctgatatcactgagatttgccaga 133 Query: 536 gtgcttgc 543 | |||||| Sbjct: 134 gagcttgc 141
>ref|NM_063872.3| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.1) (cdc-48.1) mRNA, complete cds Length = 2762 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 279 atggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggccagac 338 |||||||| ||||| || ||||||| || |||||||| || ||||| ||||| || || Sbjct: 1860 atggatggaatgaacgcgaagaaaaatgtgttcatcatcggagctacaaacagacctgat 1919 Query: 339 atcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctacatccc 394 ||||| || || || | ||| | ||||| || ||||||||||||||||||||||| Sbjct: 1920 atcattgatccagctgttcttcgtccaggtcgccttgatcagcttatctacatccc 1975
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 39 gccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagctg 98 |||||||| ||||| || ||||| ||||| ||||||||| ||||||| || |||||| Sbjct: 1573 gccaaggccatcgccaacgagtgccaggcgaacttcatctcggtcaagggcccggagctg 1632 Query: 99 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 || ||||||||||| || ||| ||||| || ||||| || || ||||||||||| Sbjct: 1633 ctgaccatgtggttcggcgagtcggaggcgaacgtgcgcgacatcttcgacaaggc 1688
>emb|Z74174.1|SCYDL126C S.cerevisiae chromosome IV reading frame ORF YDL126c Length = 3251 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 279 atggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggccaga 337 |||||||| |||||||||||||||| || ||| | |||||||| ||||| |||||||| Sbjct: 1046 atggatggtatgaatgctaagaaaaatgtgttcgtgattggtgccaccaataggccaga 988
>emb|X56956.1|SCCDC48 S. cerevisiae CDC48 gene for cell cycle protein CDC48p Length = 6485 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 279 atggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggccaga 337 |||||||| |||||||||||||||| || ||| | |||||||| ||||| |||||||| Sbjct: 3827 atggatggtatgaatgctaagaaaaatgtgttcgtgattggtgccaccaataggccaga 3885
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 36 ttggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgag 95 ||||||||||| || || || ||||| ||||| ||||||||| ||||||| || ||| Sbjct: 38373 ttggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgag 38432 Query: 96 ctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 ||||| ||||||||||| || ||| ||||| |||||||| || || ||||| ||||| Sbjct: 38433 ctgctgaccatgtggttcggcgagtccgaggccaatgtgcgcgacatcttcgataaggc 38491
>ref|XM_817728.1| Trypanosoma brucei TREU927 valosin-containing protein homolog (Tb10.70.1190) partial mRNA Length = 2343 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 60 tgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 |||||||| ||||||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 1570 tgtcaggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaa 1629 Query: 120 agtgaggctaatgt 133 |||||||||||| Sbjct: 1630 tctgaggctaatgt 1643
>ref|XM_385706.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05530.1) partial mRNA Length = 2466 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 2 gttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtg 61 ||||| |||||||||||| ||||||||| | ||||||||||| |||| || ||||| Sbjct: 1602 gttctttggtcctcctggtactggtaaaactatgttggccaaggccgtcgccaacgagtg 1661 Query: 62 tcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 | || ||||||||| ||||||||||||| || || | |||||||||||||||| Sbjct: 1662 tgctgccaacttcatctccgtcaagggacctgaactcctcagcatgtggtttggtgag 1719
>ref|XM_662183.1| Cryptosporidium hominis TU502 cell division cycle protein 48 (Chro.10043) partial mRNA Length = 2445 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 127 |||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct: 1667 tcaaaggacccgagcttcttaccttatggtttggtgagagtgaggc 1712
>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence Length = 79224 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Minus Query: 276 gagatggatggcatgaatgctaagaaaaccgtcttcatcattggtgctaccaacaggcca 335 |||||||| || ||||| || ||||| | ||||||||||| || || ||||| || ||| Sbjct: 63960 gagatggacggaatgaacgcgaagaagaatgtcttcatcatcggagccaccaatagacca 63901 Query: 336 gacatcatagaccctgccctgcttaggccagggcgtcttgatcagcttatctacatccct 395 |||||||| || || || | ||| | ||||| ||||| |||||||| |||||||| || Sbjct: 63900 gacatcattgatccagctgttcttcgtccaggacgtctcgatcagctcatctacattcca 63841 Query: 396 cttcctgatg 405 ||||| |||| Sbjct: 63840 cttccagatg 63831
>emb|BX933202.2| Gallus gallus finished cDNA, clone ChEST509h23 Length = 755 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 81 atcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgag 140 ||||||||||| || ||||||||||||||||||| || ||| || |||||||| ||| Sbjct: 680 atcaagggaccagaattgcttaccatgtggtttggagaatctgaagccaatgtgcgcgag 739 Query: 141 attttcgacaaggc 154 || || |||||||| Sbjct: 740 atctttgacaaggc 753
>dbj|AK209215.1| Mus musculus cDNA, clone:Y2G0114F19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 408 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || ||||| | || || || | ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctgcccgt 237 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>dbj|AK207257.1| Mus musculus cDNA, clone:Y2G0107G23, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 396 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 312 atcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagggcgt 371 |||||||| |||||||||||||| |||||||| || || || | || || || || ||| Sbjct: 17 atcattggagctaccaacaggcctgacatcattgatccagctatcctaagacctggccgt 76 Query: 372 cttgatcagcttatctacatccctcttcctgatg 405 || |||||||| || || ||||| |||||||||| Sbjct: 77 ctagatcagctcatttatatcccacttcctgatg 110
>gb|AF044488.1|AF044488 Trypanosoma brucei valosin-containing protein homolog (VCP) gene, complete cds Length = 2463 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 60 tgtcaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 |||||||| ||||||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 1654 tgtcaggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaa 1713 Query: 120 agtgaggctaatgt 133 |||||||||||| Sbjct: 1714 tctgaggctaatgt 1727
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccaga 337 ||||||||||||||| || |||||||||||||| Sbjct: 1961 cgtcttcatcattggagccaccaacaggccaga 1993
>gb|BC044980.1| Xenopus laevis hypothetical protein MGC52979, mRNA (cDNA clone MGC:52979 IMAGE:4930716), complete cds Length = 4033 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 259 tgaaccagctgctgactgagatgga 283 ||||||||||||||||||||||||| Sbjct: 2137 tgaaccagctgctgactgagatgga 2161
>ref|XM_758425.1| Theileria parva strain Muguga chromosome 3 cell division cycle protein 48 (TP03_0490) partial mRNA Length = 2865 Score = 50.1 bits (25), Expect = 0.008 Identities = 94/117 (80%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 |||||||| || || || ||||||||||| ||||| ||||| || |||||| | |||||| Sbjct: 2137 ttctatggaccaccaggatgtggtaaaacattattagccaaagctatcgcacacgagtgt 2196 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 119 | || || |||||| ||||| || |||||||| | || ||||||||||||||| Sbjct: 2197 aacgccaatttcatctccatcaaaggccctgagcttttgacaatgtggtttggtgag 2253
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 305 cgtcttcatcattggtgctaccaacaggccaga 337 ||||||||||||||| || |||||||||||||| Sbjct: 1961 cgtcttcatcattggagccaccaacaggccaga 1993
>ref|NM_201490.1| Danio rerio N-ethylmaleimide-sensitive factor (nsf), mRNA Length = 2358 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaac 31 |||||||||||||||||||||||| Sbjct: 843 tggtcctcctggctgtggtaaaac 866
>ref|XM_697421.1| PREDICTED: Danio rerio hypothetical protein LOC555079 (LOC555079), mRNA Length = 2357 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaac 31 |||||||||||||||||||||||| Sbjct: 843 tggtcctcctggctgtggtaaaac 866
>gb|BC050490.1| Danio rerio N-ethylmaleimide-sensitive factor, mRNA (cDNA clone MGC:56054 IMAGE:3820337), complete cds Length = 2358 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaac 31 |||||||||||||||||||||||| Sbjct: 843 tggtcctcctggctgtggtaaaac 866
>emb|AL590145.3| Zebrafish DNA sequence from clone RP71-18K17 in linkage group 3, complete sequence Length = 135675 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaac 31 |||||||||||||||||||||||| Sbjct: 22713 tggtcctcctggctgtggtaaaac 22736
>ref|XM_415006.1| PREDICTED: Gallus gallus similar to Peroxisome assembly factor-2 (PAF-2) (Peroxisomal-type ATPase 1) (Peroxin-6) (LOC416709), mRNA Length = 2701 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 313 tcattggtgctaccaacaggccagacatcatagaccctgccctgcttaggccagg 367 ||||||| |||||||||||||| ||| || | ||||| || ||||| |||||||| Sbjct: 1856 tcattggagctaccaacaggcctgacctcctggacccagctctgctcaggccagg 1910
>ref|XM_421556.1| PREDICTED: Gallus gallus similar to ATPase family, AAA domain containing 1 (LOC423676), mRNA Length = 2045 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaacctt 34 ||||||| |||||||||||||| |||||||| Sbjct: 698 tctatggccctcctggctgtggcaaaacctt 728
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 336 gacatcatagaccctgccctgcttaggccagggcgtcttgatcagct 382 ||||| ||||||||||||||||| || || |||||| ||||| |||| Sbjct: 2231710 gacataatagaccctgccctgctcagacccgggcgttttgatgagct 2231756
>emb|BX932475.2| Gallus gallus finished cDNA, clone ChEST629e1 Length = 1417 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaacctt 34 ||||||| |||||||||||||| |||||||| Sbjct: 716 tctatggccctcctggctgtggcaaaacctt 746
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatgg 286 ||||||||||| |||||||||||||| Sbjct: 892566 aaccagctgctcactgagatggatgg 892591 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 257 gctgaaccagctgctgactgagatggatgg 286 |||||||||||| ||||| ||||||||||| Sbjct: 305122 gctgaaccagctcctgacggagatggatgg 305151
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 261 aaccagctgctgactgagatggatgg 286 |||||||| ||||||||||||||||| Sbjct: 1952267 aaccagctcctgactgagatggatgg 1952242
>ref|XM_472796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1755 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatgg 286 ||||||||||| |||||||||||||| Sbjct: 1252 aaccagctgcttactgagatggatgg 1277
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 105 atgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 ||||||||||||||| |||||| || ||||| || ||||| |||||||| Sbjct: 1676 atgtggtttggtgagtctgaggcaaacgtgcgggacatttttgacaaggc 1725
>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence Length = 182676 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 accatgtgtgctcttctttgat 188 |||||||||||||||||||||| Sbjct: 139758 accatgtgtgctcttctttgat 139737
>ref|XM_750952.1| Aspergillus fumigatus Af293 cell division control protein Cdc48 (Afu2g17110) partial mRNA Length = 2460 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgag 119 |||||||||||||||| || | ||||||||| |||||| Sbjct: 1682 tcaagggacctgagcttctgagcatgtggttcggtgag 1719
>gb|AY080962.1| Aspergillus fumigatus Mvp1p (25d9-1), Nha1p (25d9-2), 25D9-9 (25d9-9), 25D9-10 (25d9-10), Ste50p (25d9-3), Cdc48p (25d9-4), 25D9-5p (25d9-5), 25D9-11 (25d9-11), 25D9-6 (25d9-6), Nip7p (25d9-7), Noc3p (25d9-8), and 25D9-12 (25d9-12) genes, complete cds Length = 41396 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgag 119 |||||||||||||||| || | ||||||||| |||||| Sbjct: 24804 tcaagggacctgagcttctgagcatgtggttcggtgag 24767
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 133 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 192 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 193 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 250
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 1697 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 1756 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 1757 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 1814
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 46953 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 47012 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 47013 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 47070
>ref|XM_627893.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase ortholog,transcripts identified by EST (cgd1_330), partial mRNA Length = 2463 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 127 |||| ||||| || || |||||| | |||||||||||||||||||| Sbjct: 1685 tcaaaggacccgaacttcttaccttatggtttggtgagagtgaggc 1730
>gb|AY973543.1| Hyaloperonospora parasitica isolate Emoy2 clone BAC 9B13 and BAC 4C4, complete sequence Length = 120624 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 81 atcaagggacctgagctgcttaccatgtggtttggtga 118 |||||||| || |||||| | ||||||||||||||||| Sbjct: 44795 atcaagggtcccgagctgttgaccatgtggtttggtga 44832
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 158400 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 158459 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 158460 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 158517
>dbj|AK119311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G08, full insert sequence Length = 3224 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgag 119 ||||||| || |||||||| ||||||||||| |||||| Sbjct: 1938 tcaagggccccgagctgctgaccatgtggttcggtgag 1975
>dbj|AK064543.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-A09, full insert sequence Length = 2112 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatgg 286 ||||||||||| |||||||||||||| Sbjct: 24 aaccagctgcttactgagatggatgg 49
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 144246 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 144305 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 144306 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 144363
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 44.1 bits (22), Expect = 0.47 Identities = 94/118 (79%) Strand = Plus / Plus Query: 37 tggccaaggcaatcgcaaatgagtgtcaggctaacttcatcagtatcaagggacctgagc 96 |||||||||| || || || ||||| ||||| ||||||||| ||||||| || || | Sbjct: 134 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 193 Query: 97 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagattttcgacaaggc 154 |||| ||||||||||| || ||| |||||| || ||||| || || ||||| ||||| Sbjct: 194 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 251
>ref|NM_148326.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G15215 mRNA, complete cds Length = 4173 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 510 tggtcctcctggttgtggtaaaacc 534
>ref|NM_148328.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G15236 mRNA, complete cds Length = 4167 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 504 tggtcctcctggttgtggtaaaacc 528
>ref|NM_148327.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G15233 mRNA, complete cds Length = 3543 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||| |||||||||||||| Sbjct: 546 tggtcctcctagctgtggtaaaacc 570
>ref|XM_386072.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05896.1) partial mRNA Length = 1653 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 297 aagaaaaccgtcttcatcattggtg 321 |||||||||||||||||||| |||| Sbjct: 1413 aagaaaaccgtcttcatcatcggtg 1389
>gb|BC046949.1| Xenopus laevis valosin containing protein, mRNA (cDNA clone MGC:52611 IMAGE:5571505), complete cds Length = 3148 Score = 42.1 bits (21), Expect = 1.9 Identities = 147/189 (77%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||||||||| ||||| |||||||| || || |||| ||||| || || || || || Sbjct: 1697 ttctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgc 1756 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| ||||| || || || || || || ||||||||||| ||| | Sbjct: 1757 caggccaacttcatctccatcaaagggcccgaacttctcactatgtggtttggagagtct 1816 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 ||||| || || || ||||| || || |||||| || | | || || ||||| |||||| Sbjct: 1817 gaggccaacgtccgagagatatttgataaggctcggcaggctgctccctgtgtcctcttc 1876 Query: 183 tttgatgaa 191 ||||||||| Sbjct: 1877 tttgatgaa 1885
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene Length = 40050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ttggtgagagtgaggctaatgtgcg 136 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|BX028304.1|CNS08U04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 82 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 141 ||||||| || |||||||| ||||||||||| || ||| ||||| || ||||| || | Sbjct: 444 tcaagggcccggagctgctgaccatgtggttcggcgagtcggaggcgaacgtgcgcgaca 503 Query: 142 ttttcgacaaggc 154 | ||||||||||| Sbjct: 504 tcttcgacaaggc 516
>emb|BX014465.1|CNS08JBP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 957 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 aaccagctgctgactgagatggatggcat 289 |||||||||||||| |||||||| ||||| Sbjct: 673 aaccagctgctgacggagatggacggcat 645
>emb|BX014464.1|CNS08JBO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcat 289 |||||||||||||| |||||||| ||||| Sbjct: 809 aaccagctgctgacggagatggacggcat 837
>emb|Z71605.1|SCYNL329C S.cerevisiae chromosome XIV reading frame ORF YNL329c Length = 4135 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ttggtgagagtgaggctaatgtgcg 136 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|Z48502.1|SC9532X S.cerevisiae chromosome XIII cosmid 9532 Length = 24105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tttggtgagagtgaggctaat 131 ||||||||||||||||||||| Sbjct: 12805 tttggtgagagtgaggctaat 12825
>emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, N0305 & N0310 genes Length = 8223 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ttggtgagagtgaggctaatgtgcg 136 ||||||||||||| ||||||||||| Sbjct: 6228 ttggtgagagtgaagctaatgtgcg 6204
>emb|X54240.1|XLP9715S X.laevis mRNA for p97 subunit of 15S Mg(2+)-ATPase Length = 3286 Score = 42.1 bits (21), Expect = 1.9 Identities = 147/189 (77%) Strand = Plus / Plus Query: 3 ttctatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatgagtgt 62 ||||||||||| ||||| |||||||| || || |||| ||||| || || || || || Sbjct: 1846 ttctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgc 1905 Query: 63 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 122 ||||| ||||||||| ||||| || || || || || || ||||||||||| ||| | Sbjct: 1906 caggccaacttcatctccatcaaagggcccgaacttctcactatgtggtttggagagtct 1965 Query: 123 gaggctaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgtgtgctcttc 182 ||||| || || || ||||| || || |||||| || | | || || ||||| |||||| Sbjct: 1966 gaggccaacgtccgagagatatttgataaggctcggcaggctgctccctgtgtcctcttc 2025 Query: 183 tttgatgaa 191 ||||||||| Sbjct: 2026 tttgatgaa 2034
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 gcaccagatcttcaaagcttg 436 ||||||||||||||||||||| Sbjct: 3397624 gcaccagatcttcaaagcttg 3397604
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaaccttattggc 40 ||||||| | ||||||||||||||| ||||||| Sbjct: 68257 tggtcctgcgggctgtggtaaaaccatattggc 68289
>emb|AJ720889.1| Gallus gallus mRNA for hypothetical protein, clone 29a13 Length = 1876 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaa 30 |||||||||||||||||||| |||| Sbjct: 803 tatggtcctcctggctgtggaaaaa 827
>ref|NM_001006520.1| Gallus gallus BCS1-like (yeast) (BCS1L), mRNA Length = 1840 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaa 30 |||||||||||||||||||| |||| Sbjct: 803 tatggtcctcctggctgtggaaaaa 827
>gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, complete sequence Length = 91734 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gctggaggtgctgctgataga 254 ||||||||||||||||||||| Sbjct: 44738 gctggaggtgctgctgataga 44758
>tpg|BK001014.1| TPA: TPA_exp: Arabidopsis thaliana PDR15 ABC transporter (At4g15238) gene, complete cds Length = 6051 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 751 tggtcctcctggttgtggtaaaacc 775
>tpg|BK001013.1| TPA: TPA_exp: Arabidopsis thaliana PDR14 ABC transporter (At4g15232) gene, complete cds Length = 6111 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||| |||||||||||||| Sbjct: 768 tggtcctcctagctgtggtaaaacc 792
>tpg|BK001012.1| TPA: TPA_exp: Arabidopsis thaliana PDR13 ABC transporter (At4g15218) gene, complete cds Length = 6805 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 856 tggtcctcctggttgtggtaaaacc 880
>gb|AC157502.2| Medicago truncatula chromosome 7 BAC clone mte1-56e23, complete sequence Length = 108844 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ccatgtgtgctcttctttgatgaacttga 196 |||||||| ||||||||||||||||||| Sbjct: 54632 ccatgtgtcatcttctttgatgaacttga 54660
>ref|XM_316268.2| Anopheles gambiae str. PEST ENSANGP00000020514 (ENSANGG00000018025), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 261 aaccagctgctgactgagatggatggcat 289 |||||||||||||| |||||||| ||||| Sbjct: 808 aaccagctgctgacggagatggacggcat 836
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 gtggggatgctggaggtgctgctga 250 |||||||||||||||||| |||||| Sbjct: 49615 gtggggatgctggaggtggtgctga 49591
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 gtgctgaaccagctgctgactgagatgga 283 ||||| |||||||| |||||||||||||| Sbjct: 1889397 gtgctcaaccagcttctgactgagatgga 1889425 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 69 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagag 121 ||||||||||| | ||||| ||||||||||| | || |||| |||||||||| Sbjct: 1157560 aacttcatcagcgtgaaggggcctgagctgctgagcaagtgggttggtgagag 1157508
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 62070 tggtcctcctggttgtggtaaaacc 62094 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||| |||||||||||||| Sbjct: 53732 tggtcctcctagctgtggtaaaacc 53756 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 37568 tggtcctcctggttgtggtaaaacc 37592
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 183450 tggtcctcctggttgtggtaaaacc 183474
>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41 Length = 197419 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||||| |||||||||||| Sbjct: 15547 tggtcctcctggttgtggtaaaacc 15571 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaacc 32 |||||||||| |||||||||||||| Sbjct: 7209 tggtcctcctagctgtggtaaaacc 7233
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 342 atagaccctgccctgcttaggccagggcgtcttgatcagct 382 |||||||||||||| || ||||| |||||| ||||| |||| Sbjct: 330699 atagaccctgcccttctcaggcctgggcgttttgatgagct 330659
>gb|M96757.1|PFACDCATP Plasmodium falciparum hypothetical cell division cycle ATPase gene, partial ORF Length = 2128 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgcaaatga 58 ||||||||||| || ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 1786 tatggtcctccaggttgtggaaaaacattattagctaaagcaattgcaaatga 1838
>gb|L20789.1|YSCPAS8A Yeast PAS8 gene, complete cds Length = 3807 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ttggtgagagtgaggctaatgtgcg 136 ||||||||||||| ||||||||||| Sbjct: 2887 ttggtgagagtgaagctaatgtgcg 2911
>ref|XM_635235.1| Dictyostelium discoideum hypothetical protein (DDB0218364), partial mRNA Length = 2604 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttattggccaaggcaatcgca 53 |||||||| || || |||||||||||| |||| || || ||||||||| Sbjct: 1816 tatggtccaccaggttgtggtaaaaccctattagctaaagcaatcgca 1863
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gatggatggcatgaatgcta 297 |||||||||||||||||||| Sbjct: 2198280 gatggatggcatgaatgcta 2198299
>ref|XM_507897.1| PREDICTED: Pan troglodytes similar to ATPase family, AAA domain containing 1 (LOC450580), mRNA Length = 1250 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaac 31 ||||||| ||||| |||||||||||||| Sbjct: 436 tctatgggcctccaggctgtggtaaaac 463
>ref|XM_519198.1| PREDICTED: Pan troglodytes similar to peroxisome biogenesis factor 1 (LOC463532), mRNA Length = 4236 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gaccctgccctgcttaggcc 364 |||||||||||||||||||| Sbjct: 3352 gaccctgccctgcttaggcc 3371
>gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, complete sequence Length = 177972 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tgctggaggtgctgctgata 252 |||||||||||||||||||| Sbjct: 50845 tgctggaggtgctgctgata 50864
>ref|XM_872132.1| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 2 (LOC506045), mRNA Length = 2417 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaac 31 ||||||| ||||| |||||||||||||| Sbjct: 309 tctatgggcctccaggctgtggtaaaac 336
>ref|XM_582436.2| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 1 (LOC506045), mRNA Length = 2674 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaac 31 ||||||| ||||| |||||||||||||| Sbjct: 459 tctatgggcctccaggctgtggtaaaac 486
>ref|XM_593529.2| PREDICTED: Bos taurus similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC515497), mRNA Length = 1085 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tggtcctcctggctgtggtaaaac 31 |||||||||||||||||| ||||| Sbjct: 105 tggtcctcctggctgtgggaaaac 128
>gb|BC073998.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone MGC:90254 IMAGE:6199813), complete cds Length = 2792 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaac 31 ||||||| ||||| |||||||||||||| Sbjct: 413 tctatgggcctccaggctgtggtaaaac 440
>gb|AC161612.5| Pan troglodytes BAC clone CH251-703C23 from chromosome 7, complete sequence Length = 187270 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gaccctgccctgcttaggcc 364 |||||||||||||||||||| Sbjct: 73061 gaccctgccctgcttaggcc 73042
>ref|NM_000466.2| Homo sapiens peroxisome biogenesis factor 1 (PEX1), mRNA Length = 4390 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gaccctgccctgcttaggcc 364 |||||||||||||||||||| Sbjct: 3064 gaccctgccctgcttaggcc 3083
>gb|AC157608.10| Mus musculus chromosome 5, clone RP23-343F16, complete sequence Length = 204556 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gatgctggaggtgctgctga 250 |||||||||||||||||||| Sbjct: 141165 gatgctggaggtgctgctga 141184
>gb|BC063530.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone IMAGE:4386512), partial cds Length = 2501 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaac 31 ||||||| ||||| |||||||||||||| Sbjct: 301 tctatgggcctccaggctgtggtaaaac 328
>gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, complete sequence Length = 192305 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gatgctggaggtgctgctga 250 |||||||||||||||||||| Sbjct: 120353 gatgctggaggtgctgctga 120334
>ref|XM_843431.1| PREDICTED: Canis familiaris similar to peptidase (prosome, macropain) 26S subunit, ATPase 1, transcript variant 2 (LOC478703), mRNA Length = 1576 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaaccttattggccaa 43 |||||||||| |||||| |||||||||||||| ||||| Sbjct: 697 tctatggtccacctggcacaggtaaaaccttattagccaa 736
>ref|XM_851186.1| PREDICTED: Canis familiaris similar to peptidase (prosome, macropain) 26S subunit, ATPase 1, transcript variant 3 (LOC478703), mRNA Length = 1495 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 4 tctatggtcctcctggctgtggtaaaaccttattggccaa 43 |||||||||| |||||| |||||||||||||| ||||| Sbjct: 616 tctatggtccacctggcacaggtaaaaccttattagccaa 655
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 agcagtggggatgctggagg 241 |||||||||||||||||||| Sbjct: 45258 agcagtggggatgctggagg 45239
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ctggaggtgctgctgataga 254 |||||||||||||||||||| Sbjct: 13274 ctggaggtgctgctgataga 13255
>gb|AC127237.3| Mus musculus BAC clone RP24-363G13 from chromosome 3, complete sequence Length = 136362 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ctggaggtgctgctgataga 254 |||||||||||||||||||| Sbjct: 117973 ctggaggtgctgctgataga 117954
>gb|AC124184.3| Mus musculus BAC clone RP23-227N23 from 10, complete sequence Length = 182135 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 accagctgctgactgagatggatg 285 |||||| ||||||||||||||||| Sbjct: 4835 accagcagctgactgagatggatg 4812
>gb|AC145964.3| Pan troglodytes BAC clone RP43-12F2 from 7, complete sequence Length = 184675 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gaccctgccctgcttaggcc 364 |||||||||||||||||||| Sbjct: 129646 gaccctgccctgcttaggcc 129665
>ref|XM_718733.1| Plasmodium yoelii yoelii str. 17XNL cell division cycle protein 48 (PY03639) partial mRNA Length = 2448 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 tatggtcctcctggctgtggtaaaaccttatt 37 ||||| |||||||| ||||||||||| ||||| Sbjct: 1552 tatggacctcctggttgtggtaaaacattatt 1583
>gb|AC105305.8| Mus musculus strain C57BL/6J clone rp23-80n4 map 17, complete sequence Length = 214567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 agcaccatgtgtgctcttct 183 |||||||||||||||||||| Sbjct: 156789 agcaccatgtgtgctcttct 156808
>gb|AC105302.27| Mus musculus strain C57BL/6J clone rp23-45h18 map 17, complete sequence Length = 238088 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agcaccatgtgtgctcttct 183 |||||||||||||||||||| Sbjct: 216114 agcaccatgtgtgctcttct 216095
>gb|AC109609.12| Mus musculus strain C57BL/6J clone rp23-167h1 map 17, complete sequence Length = 167619 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agcaccatgtgtgctcttct 183 |||||||||||||||||||| Sbjct: 124995 agcaccatgtgtgctcttct 124976
>gb|AC117659.7| Mus musculus, clone RP23-316N7, complete sequence Length = 196981 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 accagctgctgactgagatggatg 285 |||||| ||||||||||||||||| Sbjct: 96217 accagcagctgactgagatggatg 96240 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,827,226 Number of Sequences: 3902068 Number of extensions: 4827226 Number of successful extensions: 91492 Number of sequences better than 10.0: 311 Number of HSP's better than 10.0 without gapping: 302 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 90257 Number of HSP's gapped (non-prelim): 1178 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)