| Clone Name | bags15o01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G14, full insert sequence Length = 2162 Score = 214 bits (108), Expect = 2e-52 Identities = 436/542 (80%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 46 ttgtggatgggcggacctttggtagactgcagtgccgaaggtgtgagcagcggctcatgt 105 ||||||||||||||| ||||||| |||| || ||||||||||| |||||| ||| |||| Sbjct: 765 ttgtggatgggcggatctttggtggactctagcgccgaaggtgttagcagcagcttatgt 824 Query: 106 ctcagccgcagcatctgcgagaaagcaggttttgagcacagctcttgtgctctccctgaa 165 ||| ||| ||||| || || || ||||| |||||||| ||||| |||||| | ||| | Sbjct: 825 ctctgccacagcacctctgaaaaggcaggctttgagcatagctcatgtgctagctctgga 884 Query: 166 gatgataagtttgaagctggaatagcatctgcgaaaa-atgattccgttgtcaaggaaat 224 |||| || | |||||||||||||| | || | || |||||| |||||||| ||||| Sbjct: 885 gatggaaattgtgaagctggaatagattttggggcaagatgatttggttgtcaatgaaat 944 Query: 225 cagtttggctcttgctgaggtgatgcgtgtcta---tgatgacaatgatgatgaagagac 281 | ||||| ||||||| ||||||| ||||| |||| | |||||||||||| ||| Sbjct: 945 tggaatggctattgctgaagtgatgcatgtctgcagtgatcatgatgatgatgaagggac 1004 Query: 282 agatctgagtgaagactccgacgaaaatggggattcactttctgtagaatcagattcggc 341 |||| | ||||||||| || ||||||| || | ||||||| | ||||||||||| | Sbjct: 1005 agattcgggtgaagactttgatgaaaatgagggtctactttctctggaatcagattccac 1064 Query: 342 tgatgatttggttgatattgacgctgaactggtcacatcgccagccttcactgctgggaa 401 ||||||| | || |||||||| |||| |||||| |||||| |||| || | | || Sbjct: 1065 tgatgatgtagtggatattgataatgaattggtcatatcgcctaccttttctagttgcaa 1124 Query: 402 tgcatctgaatcatcaactgtgaaatcagagaatggaaattcttcaatcaatgggactca 461 ||||||||||||||||| |||||||| |||||||||||| || ||||| |||| Sbjct: 1125 tgcatctgaatcatcaatcaacaaatcagactctggaaattcttccattaatggcactcc 1184 Query: 462 actgttggtttctgcaatgaaaggaagccgtgcaaagcggggaattgtcacaaagttgag 521 || |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 1185 accgttggtttctgcaatgaaaggaagccgtgcaaagttgggaatcgtcacaagtttgag 1244 Query: 522 tgtttcatgggccccccgacgtatatgatcctcctgttacttctgactcacacacagtga 581 ||||||||||| |||| || ||||||||||||||||||||||||| || ||||| |||| Sbjct: 1245 tgtttcatggg-cccctgatgtatatgatcctcctgttacttctgggtctcacactgtga 1303 Query: 582 ag 583 || Sbjct: 1304 ag 1305
>dbj|AK104661.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E03, full insert sequence Length = 1158 Score = 178 bits (90), Expect = 1e-41 Identities = 262/318 (82%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 266 atgatgatgaagagacagatctgagtgaagactccgacgaaaatggggattcactttctg 325 |||||||||||| ||||||| | ||||||||| || ||||||| || | ||||||| Sbjct: 30 atgatgatgaagggacagattcgggtgaagactttgatgaaaatgagggtctactttctc 89 Query: 326 tagaatcagattcggctgatgatttggttgatattgacgctgaactggtcacatcgccag 385 | ||||||||||| |||||||| | || |||||||| |||| |||||| |||||| Sbjct: 90 tggaatcagattccactgatgatgtagtggatattgataatgaattggtcatatcgccta 149 Query: 386 ccttcactgctgggaatgcatctgaatcatcaactgtgaaatcagagaatggaaattctt 445 |||| || | | ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 150 ccttttctagttgcaatgcatctgaatcatcaatcaacaaatcagactctggaaattctt 209 Query: 446 caatcaatgggactcaactgttggtttctgcaatgaaaggaagccgtgcaaagcggggaa 505 | || ||||| |||| || |||||||||||||||||||||||||||||||||| ||||| Sbjct: 210 ccattaatggcactccaccgttggtttctgcaatgaaaggaagccgtgcaaagttgggaa 269 Query: 506 ttgtcacaaagttgagtgtttcatgggccccccgacgtatatgatcctcctgttacttct 565 | ||||||| |||||||||||||||| |||| || |||||||||||||||||||||||| Sbjct: 270 tcgtcacaagtttgagtgtttcatggg-cccctgatgtatatgatcctcctgttacttct 328 Query: 566 gactcacacacagtgaag 583 | || ||||| |||||| Sbjct: 329 gggtctcacactgtgaag 346
>dbj|AK061117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F03, full insert sequence Length = 1180 Score = 178 bits (90), Expect = 1e-41 Identities = 262/318 (82%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 266 atgatgatgaagagacagatctgagtgaagactccgacgaaaatggggattcactttctg 325 |||||||||||| ||||||| | ||||||||| || ||||||| || | ||||||| Sbjct: 7 atgatgatgaagggacagattcgggtgaagactttgatgaaaatgagggtctactttctc 66 Query: 326 tagaatcagattcggctgatgatttggttgatattgacgctgaactggtcacatcgccag 385 | ||||||||||| |||||||| | || |||||||| |||| |||||| |||||| Sbjct: 67 tggaatcagattccactgatgatgtagtggatattgataatgaattggtcatatcgccta 126 Query: 386 ccttcactgctgggaatgcatctgaatcatcaactgtgaaatcagagaatggaaattctt 445 |||| || | | ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 127 ccttttctagttgcaatgcatctgaatcatcaatcaacaaatcagactctggaaattctt 186 Query: 446 caatcaatgggactcaactgttggtttctgcaatgaaaggaagccgtgcaaagcggggaa 505 | || ||||| |||| || |||||||||||||||||||||||||||||||||| ||||| Sbjct: 187 ccattaatggcactccaccgttggtttctgcaatgaaaggaagccgtgcaaagttgggaa 246 Query: 506 ttgtcacaaagttgagtgtttcatgggccccccgacgtatatgatcctcctgttacttct 565 | ||||||| |||||||||||||||| |||| || |||||||||||||||||||||||| Sbjct: 247 tcgtcacaagtttgagtgtttcatggg-cccctgatgtatatgatcctcctgttacttct 305 Query: 566 gactcacacacagtgaag 583 | || ||||| |||||| Sbjct: 306 gggtctcacactgtgaag 323
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 133 bits (67), Expect = 7e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 465 gttggtttctgcaatgaaaggaagccgtgcaaagcggggaattgtcacaaagttgagtgt 524 |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 131313 gttggtttctgcaatgaaaggaagccgtgcaaagttgggaatcgtcacaagtttgagtgt 131254 Query: 525 ttcatgggccccccgacgtatatgatcctcctgttacttctgactcacacacagtgaag 583 |||||||| |||| || ||||||||||||||||||||||||| || ||||| |||||| Sbjct: 131253 ttcatggg-cccctgatgtatatgatcctcctgttacttctgggtctcacactgtgaag 131196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 266 atgatgatgaagagacagatctgagtgaagactccgacgaaaatggggattcactttctg 325 |||||||||||| ||||||| | ||||||||| || ||||||| || | ||||||| Sbjct: 131915 atgatgatgaagggacagattcgggtgaagactttgatgaaaatgagggtctactttctc 131856 Query: 326 tagaatcagattcggctgatgatttggttgatattgacgctgaactggtcacatcgccag 385 | ||||||||||| |||||||| | || |||||||| |||| |||||| |||||| Sbjct: 131855 tggaatcagattccactgatgatgtagtggatattgataatgaattggtcatatcgccta 131796 Query: 386 ccttcactgctgggaatgcatctgaatcatcaa 418 |||| || | | ||||||||||||||||||| Sbjct: 131795 ccttttctagttgcaatgcatctgaatcatcaa 131763
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 7e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 465 gttggtttctgcaatgaaaggaagccgtgcaaagcggggaattgtcacaaagttgagtgt 524 |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 34634019 gttggtttctgcaatgaaaggaagccgtgcaaagttgggaatcgtcacaagtttgagtgt 34633960 Query: 525 ttcatgggccccccgacgtatatgatcctcctgttacttctgactcacacacagtgaag 583 |||||||| |||| || ||||||||||||||||||||||||| || ||||| |||||| Sbjct: 34633959 ttcatggg-cccctgatgtatatgatcctcctgttacttctgggtctcacactgtgaag 34633902 Score = 107 bits (54), Expect = 4e-20 Identities = 296/376 (78%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 46 ttgtggatgggcggacctttggtagactgcagtgccgaaggtgtgagcagcggctcatgt 105 ||||||||||||||| ||||||| |||| || ||||||||||| |||||| ||| |||| Sbjct: 34634844 ttgtggatgggcggatctttggtggactctagcgccgaaggtgttagcagcagcttatgt 34634785 Query: 106 ctcagccgcagcatctgcgagaaagcaggttttgagcacagctcttgtgctctccctgaa 165 ||| ||| ||||| || || || ||||| |||||||| ||||| |||||| | ||| | Sbjct: 34634784 ctctgccacagcacctctgaaaaggcaggctttgagcatagctcatgtgctagctctgga 34634725 Query: 166 gatgataagtttgaagctggaatagcatctgcgaaaaatgattccgttgtcaaggaaatc 225 |||| || | |||||||||||||| | || | || |||||| |||||||| ||||| Sbjct: 34634724 gatggaaattgtgaagctggaatagattttgggcaagatgatttggttgtcaatgaaatt 34634665 Query: 226 agtttggctcttgctgaggtgatgcgtgtct---atgatgacaatgatgatgaagagaca 282 | ||||| ||||||| ||||||| ||||| |||| | |||||||||||| |||| Sbjct: 34634664 ggaatggctattgctgaagtgatgcatgtctgcagtgatcatgatgatgatgaagggaca 34634605 Query: 283 gatctgagtgaagactccgacgaaaatggggattcactttctgtagaatcagattcggct 342 ||| | ||||||||| || ||||||| || | ||||||| | ||||||||||| || Sbjct: 34634604 gattcgggtgaagactttgatgaaaatgagggtctactttctctggaatcagattccact 34634545 Query: 343 gatgatttggttgatattgacgctgaactggtcacatcgccagccttcactgctgggaat 402 |||||| | || |||||||| |||| |||||| |||||| |||| || | | ||| Sbjct: 34634544 gatgatgtagtggatattgataatgaattggtcatatcgcctaccttttctagttgcaat 34634485 Query: 403 gcatctgaatcatcaa 418 |||||||||||||||| Sbjct: 34634484 gcatctgaatcatcaa 34634469
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 133 bits (67), Expect = 7e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 465 gttggtttctgcaatgaaaggaagccgtgcaaagcggggaattgtcacaaagttgagtgt 524 |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 86036 gttggtttctgcaatgaaaggaagccgtgcaaagttgggaatcgtcacaagtttgagtgt 85977 Query: 525 ttcatgggccccccgacgtatatgatcctcctgttacttctgactcacacacagtgaag 583 |||||||| |||| || ||||||||||||||||||||||||| || ||||| |||||| Sbjct: 85976 ttcatggg-cccctgatgtatatgatcctcctgttacttctgggtctcacactgtgaag 85919 Score = 107 bits (54), Expect = 4e-20 Identities = 296/376 (78%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 46 ttgtggatgggcggacctttggtagactgcagtgccgaaggtgtgagcagcggctcatgt 105 ||||||||||||||| ||||||| |||| || ||||||||||| |||||| ||| |||| Sbjct: 86861 ttgtggatgggcggatctttggtggactctagcgccgaaggtgttagcagcagcttatgt 86802 Query: 106 ctcagccgcagcatctgcgagaaagcaggttttgagcacagctcttgtgctctccctgaa 165 ||| ||| ||||| || || || ||||| |||||||| ||||| |||||| | ||| | Sbjct: 86801 ctctgccacagcacctctgaaaaggcaggctttgagcatagctcatgtgctagctctgga 86742 Query: 166 gatgataagtttgaagctggaatagcatctgcgaaaaatgattccgttgtcaaggaaatc 225 |||| || | |||||||||||||| | || | || |||||| |||||||| ||||| Sbjct: 86741 gatggaaattgtgaagctggaatagattttgggcaagatgatttggttgtcaatgaaatt 86682 Query: 226 agtttggctcttgctgaggtgatgcgtgtct---atgatgacaatgatgatgaagagaca 282 | ||||| ||||||| ||||||| ||||| |||| | |||||||||||| |||| Sbjct: 86681 ggaatggctattgctgaagtgatgcatgtctgcagtgatcatgatgatgatgaagggaca 86622 Query: 283 gatctgagtgaagactccgacgaaaatggggattcactttctgtagaatcagattcggct 342 ||| | ||||||||| || ||||||| || | ||||||| | ||||||||||| || Sbjct: 86621 gattcgggtgaagactttgatgaaaatgagggtctactttctctggaatcagattccact 86562 Query: 343 gatgatttggttgatattgacgctgaactggtcacatcgccagccttcactgctgggaat 402 |||||| | || |||||||| |||| |||||| |||||| |||| || | | ||| Sbjct: 86561 gatgatgtagtggatattgataatgaattggtcatatcgcctaccttttctagttgcaat 86502 Query: 403 gcatctgaatcatcaa 418 |||||||||||||||| Sbjct: 86501 gcatctgaatcatcaa 86486
>gb|AY104696.1| Zea mays PCO105438 mRNA sequence Length = 1009 Score = 71.9 bits (36), Expect = 2e-09 Identities = 118/144 (81%), Gaps = 1/144 (0%) Strand = Plus / Plus Query: 439 aattcttcaatcaatgggactcaactgttggtttctgcaatgaaaggaagccgtgcaaag 498 ||||||||||| ||||| |||| | ||| ||||||||||||||||||| ||||| ||| Sbjct: 112 aattcttcaattaatggcactccaaggttagtttctgcaatgaaaggaactcgtgccaag 171 Query: 499 cggggaattgtcacaaagttgagtgtttcatgggccccccgacgtatatgatcctcctgt 558 |||||| ||||||||||| |||||||||| || | || |||||||| || ||| | Sbjct: 172 aagggaatcaaaacaaagttgagcgtttcatggg-ccactgatgtatatgacccacctat 230 Query: 559 tacttctgactcacacacagtgaa 582 |||||| ||||| ||||| ||||| Sbjct: 231 tacttcagactcgcacactgtgaa 254
>gb|BC100008.1| Danio rerio zgc:110391, mRNA (cDNA clone MGC:110391 IMAGE:2600360), complete cds Length = 3706 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 1706 atgatgacaatgatgatgaagag 1728
>gb|BC081540.1| Danio rerio zgc:110391, mRNA (cDNA clone IMAGE:6034151), partial cds Length = 2071 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 1714 atgatgacaatgatgatgaagag 1736
>gb|BC048031.1| Danio rerio zgc:110391, mRNA (cDNA clone IMAGE:2601173), partial cds Length = 2192 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 1793 atgatgacaatgatgatgaagag 1815
>ref|NM_001031668.1| Danio rerio zgc:110391 (zgc:110391), mRNA Length = 3706 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 1706 atgatgacaatgatgatgaagag 1728
>ref|NM_167537.1| Drosophila melanogaster CG13008-RB, transcript variant B (CG13008), mRNA Length = 989 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 523 atgatgacaatgatgatgaagag 545
>ref|NM_132926.1| Drosophila melanogaster CG13008-RA, transcript variant A (CG13008), mRNA Length = 3002 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 523 atgatgacaatgatgatgaagag 545
>gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, region 15B-15B, BAC clone BACR18G21, complete sequence Length = 168514 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 90001 atgatgacaatgatgatgaagag 90023
>gb|BT003636.1| Drosophila melanogaster AT18238 full insert cDNA Length = 3017 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 524 atgatgacaatgatgatgaagag 546
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete sequence Length = 300468 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagag 279 ||||||||||||||||||||||| Sbjct: 74440 atgatgacaatgatgatgaagag 74462
>gb|AC169500.3| Mus musculus chromosome 5, clone wi1-1024F3, complete sequence Length = 45013 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 43394 atgatgacaatgatgatgaaga 43415
>ref|XM_649211.1| Entamoeba histolytica HM-1:IMSS filopodin (57.t00019) partial mRNA Length = 3978 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 tgatgatttggttgatattgac 363 |||||||||||||||||||||| Sbjct: 3147 tgatgatttggttgatattgac 3168
>ref|XM_448955.1| Candida glabrata CBS138, CAGL0L04158g partial mRNA Length = 2799 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 443 atgatgacaatgatgatgaaga 464
>ref|XM_649223.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (57.t00012) partial mRNA Length = 1284 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 tgatgatttggttgatattgac 363 |||||||||||||||||||||| Sbjct: 456 tgatgatttggttgatattgac 477
>gb|BC053442.1| Mus musculus RIKEN cDNA 2810002O09 gene, mRNA (cDNA clone IMAGE:6333717), partial cds Length = 1458 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 1369 atgatgacaatgatgatgaaga 1390
>ref|XM_740246.1| Plasmodium chabaudi chabaudi nucleosome assembly protein 1, (PC000786.03.0) partial mRNA Length = 1014 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 tatgatgacaatgatgatgaag 277 |||||||||||||||||||||| Sbjct: 958 tatgatgacaatgatgatgaag 979
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 488224 atgatgacaatgatgatgaaga 488203
>gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, complete sequence Length = 212299 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 4910 atgatgacaatgatgatgaaga 4931
>gb|AC153419.13| Mus musculus 10 BAC RP23-291D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199606 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 185608 atgatgacaatgatgatgaaga 185629
>dbj|AK049774.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530048I19 product:hypothetical protein, full insert sequence Length = 1418 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 1383 atgatgacaatgatgatgaaga 1404
>gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209293 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 180017 atgatgacaatgatgatgaaga 179996
>ref|NM_013024.1| Rattus norvegicus spermine binding protein (Sbp), mRNA Length = 1211 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 926 atgatgacaatgatgatgaaga 947
>emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chromosome X, complete sequence Length = 191093 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 46848 atgatgacaatgatgatgaaga 46827
>gb|J02675.1|RATSBP Rat prostatic spermine-binding protein (SBP) mRNA, complete cds Length = 1211 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaaga 278 |||||||||||||||||||||| Sbjct: 926 atgatgacaatgatgatgaaga 947
>ref|XM_418996.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ11193 (LOC420910), mRNA Length = 2574 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 tgacaatgatgatgaagagac 281 ||||||||||||||||||||| Sbjct: 1182 tgacaatgatgatgaagagac 1202
>gb|AC140315.3| Mus musculus BAC clone RP23-396I19 from chromosome 3, complete sequence Length = 205029 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaag 277 ||||||||||||||||||||| Sbjct: 101856 atgatgacaatgatgatgaag 101836
>ref|XM_783449.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC583545 (LOC583545), mRNA Length = 861 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 tctatgatgacaatgatgatgaaga 278 ||||||||||| ||||||||||||| Sbjct: 455 tctatgatgacgatgatgatgaaga 431
>gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, complete sequence Length = 155323 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatgaa 276 ||||||||||||||||||||| Sbjct: 22786 tatgatgacaatgatgatgaa 22766
>gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, complete sequence Length = 191401 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 136304 tatgatgacaatgatgatga 136323
>ref|XM_637069.1| Dictyostelium discoideum hypothetical protein (DDB0204457), partial mRNA Length = 3270 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tgatgacaatgatgatgaag 277 |||||||||||||||||||| Sbjct: 831 tgatgacaatgatgatgaag 812
>ref|NM_197715.1| Oryza sativa (japonica cultivar-group) putative metalloproteinase (OSJNBa0010C11.15), mRNA Length = 786 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tcggcacgagggaaaggaag 20 |||||||||||||||||||| Sbjct: 611 tcggcacgagggaaaggaag 630
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 74756 atgatgacaatgatgatgaa 74737
>gb|BC072239.1| Xenopus laevis hypothetical protein MGC82226, mRNA (cDNA clone MGC:82226 IMAGE:4030745), complete cds Length = 3614 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagaga 280 |||||||||||||||| ||||||| Sbjct: 2771 atgatgacaatgatgaagaagaga 2794
>ref|XM_713251.1| Candida albicans SC5314 hypothetical protein (CaO19_10114), mRNA Length = 3057 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 tgatgacaatgatgatgaagagac 281 |||||||||| ||||||||||||| Sbjct: 2619 tgatgacaataatgatgaagagac 2642
>ref|XM_713155.1| Candida albicans SC5314 hypothetical protein (CaO19_2582), mRNA Length = 3057 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 tgatgacaatgatgatgaagagac 281 |||||||||| ||||||||||||| Sbjct: 2619 tgatgacaataatgatgaagagac 2642
>gb|AY816032.1| Schistosoma japonicum SJCHGC02588 protein mRNA, complete cds Length = 599 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 458 atgatgacaatgatgatgaa 477
>gb|AY815640.1| Schistosoma japonicum SJCHGC02587 protein mRNA, complete cds Length = 581 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 427 atgatgacaatgatgatgaa 446
>ref|XM_978095.1| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 3 (D14Abb1e), mRNA Length = 6243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3043 aatgatgatgaagagacaga 3062
>ref|XM_978058.1| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 2 (D14Abb1e), mRNA Length = 5205 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_978140.1| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 4 (D14Abb1e), mRNA Length = 6333 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_887825.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 2 (D14Abb1e), mRNA Length = 7336 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3043 aatgatgatgaagagacaga 3062
>ref|XM_897674.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 3 (D14Abb1e), mRNA Length = 5205 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_897688.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 4 (D14Abb1e), mRNA Length = 7700 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_621365.3| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 1 (D14Abb1e), mRNA Length = 7426 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_909336.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 7 (D14Abb1e), mRNA Length = 7336 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3043 aatgatgatgaagagacaga 3062
>ref|XM_921235.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 8 (D14Abb1e), mRNA Length = 5205 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_921244.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 9 (D14Abb1e), mRNA Length = 7700 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>ref|XM_921284.2| PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 12 (D14Abb1e), mRNA Length = 7426 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 3010 aatgatgatgaagagacaga 3029
>gb|AC146025.2| Pan troglodytes BAC clone RP43-119E9 from 7, complete sequence Length = 156630 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaagaga 280 ||||||||||||||||||| |||| Sbjct: 153258 atgatgacaatgatgatgatgaga 153281
>emb|AJ296723.1|PAB296723 Picea abies ATC microsatellite DNA, clone EATC2E07 Length = 329 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gatgacaatgatgatgaaga 278 |||||||||||||||||||| Sbjct: 246 gatgacaatgatgatgaaga 265
>emb|AJ296691.1|PAB296691 Picea abies ATC microsatellite DNA, clone EATC1B03 Length = 411 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gatgacaatgatgatgaaga 278 |||||||||||||||||||| Sbjct: 247 gatgacaatgatgatgaaga 266
>gb|BC037390.1| Mus musculus DNA segment, Chr 14, Abbott 1 expressed, mRNA (cDNA clone IMAGE:5365165), partial cds Length = 4216 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 378 aatgatgatgaagagacaga 397
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 138290 atgatgacaatgatgatgaa 138271
>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence Length = 205957 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tggggattcactttctgtag 328 |||||||||||||||||||| Sbjct: 132216 tggggattcactttctgtag 132197
>gb|AC117250.3| Mus musculus BAC clone RP24-366A20 from 12, complete sequence Length = 125733 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 20841 atgatgacaatgatgatgaa 20822
>ref|XM_724360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01661) partial mRNA Length = 2706 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 1583 atgatgacaatgatgatgaa 1602
>gb|AC005588.1| Homo sapiens PAC clone RP5-1161G23 from 7, complete sequence Length = 119483 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 61971 atgatgacaatgatgatgaa 61952
>ref|XM_668677.1| Plasmodium berghei strain ANKA hypothetical protein (PB001101.01.0) partial mRNA Length = 1755 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 1535 atgatgacaatgatgatgaa 1554
>ref|XM_788792.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat domain 27 (VPS9 domain) (LOC589141), partial mRNA Length = 1617 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 ctatgatgacaatgatgatgaaga 278 |||||||||| ||||||||||||| Sbjct: 651 ctatgatgacgatgatgatgaaga 674
>emb|CR456683.7| Zebrafish DNA sequence from clone CH211-39I13 in linkage group 13, complete sequence Length = 166196 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 aattgtcacaaagttgagtg 523 |||||||||||||||||||| Sbjct: 158718 aattgtcacaaagttgagtg 158737
>gb|AC010445.6| Homo sapiens chromosome 5 clone CTD-2234B20, complete sequence Length = 117072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 8215 tatgatgacaatgatgatga 8196
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 184742 tatgatgacaatgatgatga 184723
>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173782 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 139631 tatgatgacaatgatgatga 139650
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tcggcacgagggaaaggaag 20 |||||||||||||||||||| Sbjct: 123426 tcggcacgagggaaaggaag 123407
>gb|AC040926.5| Homo sapiens chromosome 8, clone RP11-776K3, complete sequence Length = 204177 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 ctgggaatgcatctgaatca 414 |||||||||||||||||||| Sbjct: 4759 ctgggaatgcatctgaatca 4740
>gb|AC021760.9| Homo sapiens chromosome 8, clone RP11-433L7, complete sequence Length = 183059 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 ctgggaatgcatctgaatca 414 |||||||||||||||||||| Sbjct: 177081 ctgggaatgcatctgaatca 177062
>gb|AC109455.2| Homo sapiens chromosome 5 clone RP11-221D10, complete sequence Length = 155867 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 15220 tatgatgacaatgatgatga 15239
>gb|AC011338.8| Homo sapiens chromosome 5 clone CTC-255N20, complete sequence Length = 120355 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 85611 atgatgacaatgatgatgaa 85592
>dbj|AK028620.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732418E12 product:similar to CTCL TUMOR ANTIGEN SE89-1 [Homo sapiens], full insert sequence Length = 2832 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 638 aatgatgatgaagagacaga 657
>gb|BC096616.1| Mus musculus cDNA clone IMAGE:6440752 Length = 1187 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 1144 atgatgacaatgatgatgaa 1163
>dbj|AK044563.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930022O19 product:similar to RETINOBLASTOMA-ASSOCIATED PROTEIN RAP140 [Homo sapiens], full insert sequence Length = 3735 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 2888 aatgatgatgaagagacaga 2907
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tcggcacgagggaaaggaag 20 |||||||||||||||||||| Sbjct: 21448413 tcggcacgagggaaaggaag 21448394
>gb|AC084292.23|AC084292 Mus musculus 1 BAC RP23-254E8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 192003 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tctatgatgacaatgatgat 273 |||||||||||||||||||| Sbjct: 22182 tctatgatgacaatgatgat 22201
>emb|BX833873.1|CNS09Z20 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 actccgacgaaaatggggat 315 |||||||||||||||||||| Sbjct: 80 actccgacgaaaatggggat 99
>gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosome 14, complete sequence Length = 198799 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 12480 aatgatgatgaagagacaga 12499
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 gttgatattgacgctgaact 371 |||||||||||||||||||| Sbjct: 1876625 gttgatattgacgctgaact 1876644
>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone BACR48O03, complete sequence Length = 173781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 34152 tatgatgacaatgatgatga 34133
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 113356 tatgatgacaatgatgatga 113337
>dbj|AP005140.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-65A1, complete sequence Length = 112601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 44635 tatgatgacaatgatgatga 44616
>gb|AC151847.4| Ornithorhynchus anatinus BAC clone OABb-156A1 from chromosome unknown, complete sequence Length = 120614 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 111829 atgatgacaatgatgatgaa 111848
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tcggcacgagggaaaggaag 20 |||||||||||||||||||| Sbjct: 21459676 tcggcacgagggaaaggaag 21459657
>emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chromosome 14, complete sequence Length = 210837 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aatgatgatgaagagacaga 284 |||||||||||||||||||| Sbjct: 83735 aatgatgatgaagagacaga 83754
>gb|AC138111.3| Mus musculus BAC clone RP24-262B6 from 1, complete sequence Length = 138380 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tctatgatgacaatgatgat 273 |||||||||||||||||||| Sbjct: 21154 tctatgatgacaatgatgat 21135
>emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on chromosome 2, complete sequence Length = 209013 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tgctctccctgaagatgata 172 |||||||||||||||||||| Sbjct: 73991 tgctctccctgaagatgata 74010
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete sequence Length = 207571 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ctatgatgacaatgatgatg 274 |||||||||||||||||||| Sbjct: 27590 ctatgatgacaatgatgatg 27609
>gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, complete sequence Length = 80240 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tatgatgacaatgatgatga 275 |||||||||||||||||||| Sbjct: 28057 tatgatgacaatgatgatga 28038
>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete sequence Length = 118465 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atgatgacaatgatgatgaa 276 |||||||||||||||||||| Sbjct: 57299 atgatgacaatgatgatgaa 57318 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,458,847 Number of Sequences: 3902068 Number of extensions: 5458847 Number of successful extensions: 115664 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115382 Number of HSP's gapped (non-prelim): 272 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)