ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16c20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-05
2gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-05
3gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-05
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-05
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-05
6ref|XM_479027.1| Oryza sativa (japonica cultivar-group), mRNA 40 0.55
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.55
8dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 40 0.55
9dbj|AK069667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 0.55
10gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Can... 38 2.2
11gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Canc... 38 2.2
12ref|XM_308677.2| Anopheles gambiae str. PEST ENSANGP00000021457 ... 38 2.2
13emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 2.2
14ref|XM_462839.1| Oryza sativa (japonica cultivar-group), predic... 36 8.6
15gb|AY022729.1| Oryza sativa microsatellite MRG5054 containing (C... 36 8.6
16gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 36 8.6
17gb|AC074259.14| Trypanosoma brucei chromosome 6 clone RPCI93-4M1... 36 8.6
18gb|AC084047.3| Trypanosoma brucei chromosome 6 clone RPCI93-5F5,... 36 8.6
19gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete... 36 8.6
20gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 36 8.6
21gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complet... 36 8.6
22gb|AC149717.2| Bos taurus BAC CH240-194N8 (Children's Hospital ... 36 8.6
23ref|XM_581630.2| PREDICTED: Bos taurus similar to protein kinase... 36 8.6
24ref|XM_581631.2| PREDICTED: Bos taurus similar to zinc finger, D... 36 8.6
25ref|XM_867047.1| PREDICTED: Bos taurus similar to zinc finger, D... 36 8.6
26ref|XM_879491.1| PREDICTED: Bos taurus similar to zinc finger, D... 36 8.6
27ref|XM_879459.1| PREDICTED: Bos taurus similar to zinc finger, D... 36 8.6
28gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 36 8.6
29gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome... 36 8.6
30gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 36 8.6
31emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 36 8.6
32gb|CP000316.1| Polaromonas sp. JS666, complete genome 36 8.6
33ref|XM_500350.1| Yarrowia lipolytica CLIB122, YALI0B00594g predi... 36 8.6
34gb|BT009994.1| Drosophila melanogaster RE35867 full insert cDNA 36 8.6
35emb|AJ810091.1| Streptomyces fradiae p3 gene for serine protease 3 36 8.6
36gb|AC149043.3| Uncultured bacterium zdt-44a23 clone zdt-44a23, c... 36 8.6
37gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 36 8.6
38gb|AE011820.1| Xanthomonas axonopodis pv. citri str. 306, secti... 36 8.6
39ref|NM_206200.1| Drosophila melanogaster CG11206-RB, transcript ... 36 8.6
40ref|NM_137819.2| Drosophila melanogaster CG11206-RA, transcript ... 36 8.6
41gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 36 8.6
42dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.6
43dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.6
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.6
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 36 8.6
46dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 36 8.6
47dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 36 8.6
48dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 36 8.6
49dbj|AK070870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.6
50dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.6
51gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65... 36 8.6
52dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D... 36 8.6
53emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 36 8.6 
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0313E01, complete sequence
          Length = 149215

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 10    gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
             |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 65928 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 65886
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>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029P13, complete sequence
          Length = 158506

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 10    gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
             |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 28830 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 28788
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>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0051D10, complete sequence
          Length = 140272

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 10    gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
             |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 43925 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 43967
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 10       gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
                |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 25301817 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 25301775



 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 10       gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
                |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 25190658 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 25190616
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 10       gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
                |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 25620487 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 25620445



 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 10       gaacgccgtggagctggaggcgtgccgtcggcggtgggaggag 52
                |||||| | ||||||||||||| |||| |||||||||||||||
Sbjct: 25509316 gaacgcggcggagctggaggcgagccggcggcggtgggaggag 25509274
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>ref|XM_479027.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  gcggtgggaggagatgaagc 59
           ||||||||||||||||||||
Sbjct: 429 gcggtgggaggagatgaagc 448
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 40       gcggtgggaggagatgaagc 59
                ||||||||||||||||||||
Sbjct: 24398481 gcggtgggaggagatgaagc 24398500
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>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gcggtgggaggagatgaagc 59
             ||||||||||||||||||||
Sbjct: 24348 gcggtgggaggagatgaagc 24367
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>dbj|AK069667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027N04, full
           insert sequence
          Length = 2281

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  gcggtgggaggagatgaagc 59
           ||||||||||||||||||||
Sbjct: 429 gcggtgggaggagatgaagc 448
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>gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 183897

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     gctccgagaacgccgtgga 21
             |||||||||||||||||||
Sbjct: 69719 gctccgagaacgccgtgga 69701
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>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203981

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     gctccgagaacgccgtgga 21
             |||||||||||||||||||
Sbjct: 44300 gctccgagaacgccgtgga 44318
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>ref|XM_308677.2| Anopheles gambiae str. PEST ENSANGP00000021457 (ENSANGG00000018968),
            partial mRNA
          Length = 1743

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 38   cggcggtgggaggagatgaagct 60
            |||| ||||||||||||||||||
Sbjct: 1444 cggccgtgggaggagatgaagct 1466
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 28      ggcgtgccgtcggcggtgg 46
               |||||||||||||||||||
Sbjct: 2829570 ggcgtgccgtcggcggtgg 2829552
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>ref|XM_462839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1548

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 19  ggagctggaggcgtgccg 36
           ||||||||||||||||||
Sbjct: 651 ggagctggaggcgtgccg 668
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>gb|AY022729.1| Oryza sativa microsatellite MRG5054 containing (CCG)X12, closest to
           marker S964, genomic sequence
          Length = 236

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 42  ggtgggaggagatgaagc 59
           ||||||||||||||||||
Sbjct: 155 ggtgggaggagatgaagc 172
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     gtggagctggaggcgtgc 34
              ||||||||||||||||||
Sbjct: 797172 gtggagctggaggcgtgc 797189
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>gb|AC074259.14| Trypanosoma brucei chromosome 6 clone RPCI93-4M18, complete sequence
          Length = 160865

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     gtggagctggaggcgtgc 34
              ||||||||||||||||||
Sbjct: 155748 gtggagctggaggcgtgc 155765
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>gb|AC084047.3| Trypanosoma brucei chromosome 6 clone RPCI93-5F5, complete sequence
          Length = 152595

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 17   gtggagctggaggcgtgc 34
            ||||||||||||||||||
Sbjct: 6897 gtggagctggaggcgtgc 6914
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>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence
          Length = 191467

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 10     gaacgccgtggagctggaggcg 31
              ||||| ||||||||||||||||
Sbjct: 111810 gaacgacgtggagctggaggcg 111789
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     gaggcgtgccgtcggcgg 43
              ||||||||||||||||||
Sbjct: 417399 gaggcgtgccgtcggcgg 417382
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>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence
          Length = 177736

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 10    gaacgccgtggagctggaggcg 31
             ||||| ||||||||||||||||
Sbjct: 18106 gaacgacgtggagctggaggcg 18085
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>gb|AC149717.2| Bos taurus  BAC CH240-194N8 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 140707

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 39    ggcggtgggaggagatga 56
             ||||||||||||||||||
Sbjct: 21044 ggcggtgggaggagatga 21061
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>ref|XM_581630.2| PREDICTED: Bos taurus similar to protein kinase PKNbeta (LOC505353),
            mRNA
          Length = 3432

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 40   gcggtgggaggagatgaa 57
            ||||||||||||||||||
Sbjct: 3397 gcggtgggaggagatgaa 3414
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>ref|XM_581631.2| PREDICTED: Bos taurus similar to zinc finger, DHHC domain
           containing 12, transcript variant 1 (LOC505354), mRNA
          Length = 1167

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 40  gcggtgggaggagatgaa 57
           ||||||||||||||||||
Sbjct: 699 gcggtgggaggagatgaa 682
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>ref|XM_867047.1| PREDICTED: Bos taurus similar to zinc finger, DHHC domain
           containing 12, transcript variant 2 (LOC505354), mRNA
          Length = 1167

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 40  gcggtgggaggagatgaa 57
           ||||||||||||||||||
Sbjct: 699 gcggtgggaggagatgaa 682
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>ref|XM_879491.1| PREDICTED: Bos taurus similar to zinc finger, DHHC domain
           containing 12, transcript variant 4 (LOC505354), mRNA
          Length = 1010

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 40  gcggtgggaggagatgaa 57
           ||||||||||||||||||
Sbjct: 542 gcggtgggaggagatgaa 525
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>ref|XM_879459.1| PREDICTED: Bos taurus similar to zinc finger, DHHC domain
           containing 12, transcript variant 3 (LOC505354), mRNA
          Length = 1140

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 40  gcggtgggaggagatgaa 57
           ||||||||||||||||||
Sbjct: 677 gcggtgggaggagatgaa 660
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>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009E21, complete sequence
          Length = 153214

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 42    ggtgggaggagatgaagc 59
             ||||||||||||||||||
Sbjct: 51902 ggtgggaggagatgaagc 51885
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>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08,
            complete sequence
          Length = 141535

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 42   ggtgggaggagatgaagc 59
            ||||||||||||||||||
Sbjct: 6260 ggtgggaggagatgaagc 6243
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 8       gagaacgccgtggagctg 25
               ||||||||||||||||||
Sbjct: 1520129 gagaacgccgtggagctg 1520112
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 9       agaacgccgtggagctgg 26
               ||||||||||||||||||
Sbjct: 2027073 agaacgccgtggagctgg 2027056
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     aggcgtgccgtcggcggt 44
              ||||||||||||||||||
Sbjct: 346812 aggcgtgccgtcggcggt 346795
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>ref|XM_500350.1| Yarrowia lipolytica CLIB122, YALI0B00594g predicted mRNA
          Length = 2379

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 12  acgccgtggagctggagg 29
           ||||||||||||||||||
Sbjct: 682 acgccgtggagctggagg 665
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>gb|BT009994.1| Drosophila melanogaster RE35867 full insert cDNA
          Length = 4714

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 10   gaacgccgtggagctggaggcg 31
            ||||| ||||||||||||||||
Sbjct: 2580 gaacgacgtggagctggaggcg 2601
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>emb|AJ810091.1| Streptomyces fradiae p3 gene for serine protease 3
          Length = 3919

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 28   ggcgtgccgtcggcggtg 45
            ||||||||||||||||||
Sbjct: 2308 ggcgtgccgtcggcggtg 2291
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>gb|AC149043.3| Uncultured bacterium zdt-44a23 clone zdt-44a23, complete sequence
          Length = 35946

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 42    ggtgggaggagatgaagc 59
             ||||||||||||||||||
Sbjct: 19460 ggtgggaggagatgaagc 19477
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 28      ggcgtgccgtcggcggtg 45
               ||||||||||||||||||
Sbjct: 1228026 ggcgtgccgtcggcggtg 1228043
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>gb|AE011820.1| Xanthomonas axonopodis pv. citri str. 306,  section 198 of 469 of
           the complete genome
          Length = 11001

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 29  gcgtgccgtcggcggtgg 46
           ||||||||||||||||||
Sbjct: 890 gcgtgccgtcggcggtgg 873
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>ref|NM_206200.1| Drosophila melanogaster CG11206-RB, transcript variant B (CG11206),
            mRNA
          Length = 4556

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 10   gaacgccgtggagctggaggcg 31
            ||||| ||||||||||||||||
Sbjct: 2441 gaacgacgtggagctggaggcg 2462
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>ref|NM_137819.2| Drosophila melanogaster CG11206-RA, transcript variant A (CG11206),
            mRNA
          Length = 4665

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 10   gaacgccgtggagctggaggcg 31
            ||||| ||||||||||||||||
Sbjct: 2550 gaacgacgtggagctggaggcg 2571
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     cgccgtggagctggaggc 30
              ||||||||||||||||||
Sbjct: 134904 cgccgtggagctggaggc 134921
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 43       gtgggaggagatgaagct 60
                ||||||||||||||||||
Sbjct: 18933517 gtgggaggagatgaagct 18933534
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 42       ggtgggaggagatgaagc 59
                ||||||||||||||||||
Sbjct: 22696703 ggtgggaggagatgaagc 22696686
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 19       ggagctggaggcgtgccg 36
                ||||||||||||||||||
Sbjct: 11110969 ggagctggaggcgtgccg 11110952
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 26      gaggcgtgccgtcggcgg 43
               ||||||||||||||||||
Sbjct: 7794516 gaggcgtgccgtcggcgg 7794499
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 28      ggcgtgccgtcggcggtg 45
               ||||||||||||||||||
Sbjct: 2848510 ggcgtgccgtcggcggtg 2848493
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 26      gaggcgtgccgtcggcgg 43
               ||||||||||||||||||
Sbjct: 3023442 gaggcgtgccgtcggcgg 3023425
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>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1146F03
          Length = 137047

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   ggagctggaggcgtgccg 36
            ||||||||||||||||||
Sbjct: 2762 ggagctggaggcgtgccg 2745
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>dbj|AK070870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A04, full
            insert sequence
          Length = 3589

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 43   gtgggaggagatgaagct 60
            ||||||||||||||||||
Sbjct: 1130 gtgggaggagatgaagct 1113
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>dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043G04, full
           insert sequence
          Length = 3034

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 42  ggtgggaggagatgaagc 59
           ||||||||||||||||||
Sbjct: 164 ggtgggaggagatgaagc 181
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>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete
             sequence
          Length = 307324

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 10    gaacgccgtggagctggaggcg 31
             ||||| ||||||||||||||||
Sbjct: 53109 gaacgacgtggagctggaggcg 53088
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>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0035H10
          Length = 109475

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   ggagctggaggcgtgccg 36
            ||||||||||||||||||
Sbjct: 9702 ggagctggaggcgtgccg 9685
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia
             lipolytica
          Length = 3066374

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    acgccgtggagctggagg 29
             ||||||||||||||||||
Sbjct: 57772 acgccgtggagctggagg 57755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 509,044
Number of Sequences: 3902068
Number of extensions: 509044
Number of successful extensions: 45799
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45208
Number of HSP's gapped (non-prelim): 591
length of query: 60
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 39
effective length of database: 17,151,101,840
effective search space: 668892971760
effective search space used: 668892971760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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