ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15n18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman Birk trypsin inhibitor gene, complete cds; Stowaway MITE, complete sequence; and insertion sequences xl_tt1a and xl_tt1b putative ripening related protein genes, complete cds Length = 26073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 288 gacgaggtcgagcagtgtgctccgacctgcaagagctgcc 327 ||||||||||||||||| || ||||||||||||| ||||| Sbjct: 8858 gacgaggtcgagcagtgcgccccgacctgcaagacctgcc 8897 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 132 ctcctgccgagccaaggcaaagg 154 ||||||||||||||||||||||| Sbjct: 8393 ctcctgccgagccaaggcaaagg 8415 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 58 ctagcatgctgctgatgctttccctcgagtccgccctcctcgtcgccg 105 ||||||| |||||||||||||| || ||| || |||| || ||||||| Sbjct: 8310 ctagcatcctgctgatgctttcactggaggcctcccttctggtcgccg 8357
>gb|AC140244.3| Mus musculus BAC clone RP24-285J23 from 14, complete sequence Length = 171011 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atgctgcccgtgcccgtgcccgtg 188 |||||||||||||||||||||||| Sbjct: 41946 atgctgcccgtgcccgtgcccgtg 41969
>emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot globule-associated protein 1 (gap1 gene), strain SAG B 1.85 Length = 2358 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 cgccctcctcgtcgccgccggcc 111 ||||||||||||||||||||||| Sbjct: 1975 cgccctcctcgtcgccgccggcc 1953
>gb|AY103562.1| Zea mays PCO085487 mRNA sequence Length = 2258 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 agaggccgtggaaatgctgcgac 242 ||||||||||||||||||||||| Sbjct: 2177 agaggccgtggaaatgctgcgac 2199
>gb|AY104323.1| Zea mays PCO085485 mRNA sequence Length = 1303 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 agaggccgtggaaatgctgcgac 242 ||||||||||||||||||||||| Sbjct: 557 agaggccgtggaaatgctgcgac 579
>ref|NM_184202.2| Oryza sativa (japonica cultivar-group), mRNA Length = 876 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gaggccgtggaaatgctgcgac 242 |||||||||||||||||||||| Sbjct: 384 gaggccgtggaaatgctgcgac 405
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gaggccgtggaaatgctgcgac 242 |||||||||||||||||||||| Sbjct: 1515222 gaggccgtggaaatgctgcgac 1515243 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ccctcctcgtcgccgccggcc 111 ||||||||||||||||||||| Sbjct: 2473848 ccctcctcgtcgccgccggcc 2473868 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 42453093 tgcccgtgcccgtgcccgtg 42453074 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 1353389 gagaggccgtggaagtgctgcgac 1353366
>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0409B08 Length = 134673 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gaggccgtggaaatgctgcgac 242 |||||||||||||||||||||| Sbjct: 80870 gaggccgtggaaatgctgcgac 80891
>dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D07, full insert sequence Length = 876 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gaggccgtggaaatgctgcgac 242 |||||||||||||||||||||| Sbjct: 384 gaggccgtggaaatgctgcgac 405
>dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I16, full insert sequence Length = 879 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gaggccgtggaaatgctgcgac 242 |||||||||||||||||||||| Sbjct: 387 gaggccgtggaaatgctgcgac 408
>ref|XM_550120.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ccctcctcgtcgccgccggcc 111 ||||||||||||||||||||| Sbjct: 293 ccctcctcgtcgccgccggcc 313
>ref|XM_470289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 ccgccctcctcgtcgccgccggccgcccc 116 |||||| ||||||||||||||||| |||| Sbjct: 923 ccgcccccctcgtcgccgccggcctcccc 895
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccctcctcgtcgccgccg 108 ||||||||||||||||||||| Sbjct: 843744 ccgccctcctcgtcgccgccg 843764
>gb|M75136.1|IH1CG Ictalurid herpesvirus 1 strain Auburn 1, complete genome Length = 134226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtgg 189 ||||||||||||||||||||| Sbjct: 62521 tgcccgtgcccgtgcccgtgg 62541
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 ccgccctcctcgtcgccgccggccgcccc 116 |||||| ||||||||||||||||| |||| Sbjct: 3684519 ccgcccccctcgtcgccgccggcctcccc 3684547
>ref|XM_843060.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0458) partial mRNA Length = 4542 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccgccctcctcgtcgccgccg 108 ||||||||||||||||||||| Sbjct: 2150 ccgccctcctcgtcgccgccg 2130
>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete sequence Length = 188616 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 cctgcagtgtgtgcatgtaaa 572 ||||||||||||||||||||| Sbjct: 56025 cctgcagtgtgtgcatgtaaa 56045
>ref|XM_802524.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503903.20) partial mRNA Length = 981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gaagatgatgaagagatgcgt 52 ||||||||||||||||||||| Sbjct: 853 gaagatgatgaagagatgcgt 873
>ref|XM_817026.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508153.790) partial mRNA Length = 981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gaagatgatgaagagatgcgt 52 ||||||||||||||||||||| Sbjct: 853 gaagatgatgaagagatgcgt 873
>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence Length = 211181 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 cctgcagtgtgtgcatgtaaa 572 ||||||||||||||||||||| Sbjct: 12132 cctgcagtgtgtgcatgtaaa 12152
>gb|AC161383.5| Mus musculus BAC clone RP23-68C13 from chromosome 14, complete sequence Length = 195954 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ctgcccgtgcccgtgcccgtg 188 ||||||||||||||||||||| Sbjct: 155230 ctgcccgtgcccgtgcccgtg 155210 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 155223 tgcccgtgcccgtgcccgtg 155204
>ref|NM_009900.1| Mus musculus chloride channel 2 (Clcn2), mRNA Length = 3148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 1092 gacctgcaagagctgccagcc 1112
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtgg 189 ||||||||||||||||||||| Sbjct: 254567 tgcccgtgcccgtgcccgtgg 254547
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gcttagctagtagctagctag 21 ||||||||||||||||||||| Sbjct: 134684 gcttagctagtagctagctag 134704
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 ccgccctcctcgtcgccgccggccgcccc 116 |||||| ||||||||||||||||| |||| Sbjct: 96858 ccgcccccctcgtcgccgccggcctcccc 96830
>dbj|AK141656.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030011H03 product:chloride channel 2, full insert sequence Length = 3945 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 2250 gacctgcaagagctgccagcc 2270
>dbj|AK171231.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630312D12 product:chloride channel 2, full insert sequence Length = 2934 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 908 gacctgcaagagctgccagcc 928
>dbj|AK155104.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201N06 product:chloride channel 2, full insert sequence Length = 2934 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 908 gacctgcaagagctgccagcc 928
>dbj|AK165000.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130114N01 product:chloride channel 2, full insert sequence Length = 3513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 1142 gacctgcaagagctgccagcc 1162
>dbj|AK172148.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830048E20 product:chloride channel 2, full insert sequence Length = 3757 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 1597 gacctgcaagagctgccagcc 1617
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccctcctcgtcgccgccg 108 ||||||||||||||||||||| Sbjct: 98567 ccgccctcctcgtcgccgccg 98587
>gb|AF332141.1|AF332141 Mus musculus receptor activator of NF-kappaB ligand (Tnfsf11) gene, 5' flanking and promoter regions Length = 2344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ctgcccgtgcccgtgcccgtg 188 ||||||||||||||||||||| Sbjct: 1322 ctgcccgtgcccgtgcccgtg 1302
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gcttagctagtagctagctag 21 ||||||||||||||||||||| Sbjct: 23417363 gcttagctagtagctagctag 23417383 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccctcctcgtcgccgccggc 110 |||||||||||||||||||| Sbjct: 17353575 ccctcctcgtcgccgccggc 17353594
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 ccgccctcctcgtcgccgccggccgcccc 116 |||||| ||||||||||||||||| |||| Sbjct: 3684630 ccgcccccctcgtcgccgccggcctcccc 3684658
>gb|AC126690.5| Mus musculus BAC clone RP23-189K24 from chromosome 14, complete sequence Length = 212894 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ctgcccgtgcccgtgcccgtg 188 ||||||||||||||||||||| Sbjct: 41727 ctgcccgtgcccgtgcccgtg 41707 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 41720 tgcccgtgcccgtgcccgtg 41701
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ccctcctcgtcgccgccggcc 111 ||||||||||||||||||||| Sbjct: 28269 ccctcctcgtcgccgccggcc 28289
>gb|AF097415.1|AF097415 Mus musculus chloride channel CLC-2 (Clcn2) mRNA, complete cds Length = 3148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 1092 gacctgcaagagctgccagcc 1112
>gb|AF139724.1|AF139724 Mus musculus voltage-regulated and volume-regulated chloride channel ClC-2 mRNA, complete cds Length = 3107 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 1043 gacctgcaagagctgccagcc 1063
>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete sequence Length = 206348 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gacctgcaagagctgccagcc 331 ||||||||||||||||||||| Sbjct: 57166 gacctgcaagagctgccagcc 57146
>gb|AY968582.1| Expression vector pKLAC1, complete sequence Length = 9091 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 4557 tgcccgtgcccgtgcccgtg 4538
>ref|XM_549980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 4 gagaggccgtggaagtgctgcgac 27
>ref|XM_550544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2699 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 2243 cctcgtcgccgccggccgcc 2224
>ref|XM_550525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 1858 cctcgtcgccgccggccgcc 1839
>ref|XM_481252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 321 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 168 gtccgccctcctcgtcgccg 149
>ref|XM_479703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgccctcctcgtcgccgccg 108 |||||||||||||||||||| Sbjct: 752 cgccctcctcgtcgccgccg 771
>ref|NM_189380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 549 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 101 tgcccgtgcccgtgcccgtg 82
>ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1692 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 51 gtccgccctcctcgtcgccg 70
>gb|AC130666.9| Mus musculus chromosome 5, clone RP24-79O7, complete sequence Length = 172995 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 159906 tgcccgtgcccgtgcccgtg 159887
>gb|AC134605.5| Mus musculus BAC clone RP23-42E17 from chromosome 14, complete sequence Length = 216097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 156286 tgcccgtgcccgtgcccgtg 156267
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 145633 tgcccgtgcccgtgcccgtg 145652
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 31035 tgcccgtgcccgtgcccgtg 31054
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cctcctcgtcgccgccggcc 111 |||||||||||||||||||| Sbjct: 468367 cctcctcgtcgccgccggcc 468348
>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence Length = 216902 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 2603 gcagcagcctgcagtgtgtg 2622
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 61710 tgcccgtgcccgtgcccgtg 61729
>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence Length = 197683 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 135365 tgcccgtgcccgtgcccgtg 135384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 135359 tgcccgtgcccgtgcccgtg 135378
>gb|BC043995.1| Xenopus laevis ACTN1 protein, mRNA (cDNA clone MGC:53955 IMAGE:5570582), complete cds Length = 3658 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 gtcgctgcagcagcctgcag 558 |||||||||||||||||||| Sbjct: 44 gtcgctgcagcagcctgcag 25
>gb|BT011172.1| Drosophila melanogaster RH38069 full insert cDNA Length = 8160 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctcgtcgccgccggccgcccc 116 |||||||||||||||||| ||||| Sbjct: 360 ctcctcgtcgccgccggcagcccc 337
>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence Length = 222814 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agcctgcagtgtgtgcatgt 569 |||||||||||||||||||| Sbjct: 168605 agcctgcagtgtgtgcatgt 168624 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agcctgcagtgtgtgcatgt 569 |||||||||||||||||||| Sbjct: 168527 agcctgcagtgtgtgcatgt 168546
>ref|XM_863655.1| PREDICTED: Canis familiaris hypothetical protein LOC612479 (LOC612479), mRNA Length = 1548 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 1178 tgcccgtgcccgtgcccgtg 1197
>ref|XM_757193.1| Ustilago maydis 521 hypothetical protein (UM06139.1) partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 1928 tgcccgtgcccgtgcccgtg 1909
>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete sequence Length = 218000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 6456 tgcccgtgcccgtgcccgtg 6475 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 6450 tgcccgtgcccgtgcccgtg 6469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 6444 tgcccgtgcccgtgcccgtg 6463
>gb|AC125075.4| Mus musculus BAC clone RP23-468P13 from chromosome 19, complete sequence Length = 188709 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 151266 gcagcagcctgcagtgtgtg 151285
>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence Length = 171124 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggggggagacgaagagaggc 225 |||||||||||||||||||| Sbjct: 122768 ggggggagacgaagagaggc 122749
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 64718 tgcccgtgcccgtgcccgtg 64699
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence Length = 116810 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 94968 tgcccgtgcccgtgcccgtg 94949
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 125537 tgcccgtgcccgtgcccgtg 125518
>ref|NM_009289.1| Mus musculus STE20-like kinase (yeast) (Slk), mRNA Length = 4279 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 2004 gcagcagcctgcagtgtgtg 2023
>ref|XM_793013.1| PREDICTED: Strongylocentrotus purpuratus similar to likely ortholog of mouse ubiquitin-conjugating enzyme E2-230K (LOC593542), mRNA Length = 4176 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gccatgaagatgatgaagag 46 |||||||||||||||||||| Sbjct: 2504 gccatgaagatgatgaagag 2523
>emb|Y18818.1|SLI18818 Streptomyces lividans transcriptional regulator and actinorhodin biosynthetic genes, strain TK21 Length = 2947 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 2254 tgcccgtgcccgtgcccgtg 2273
>emb|X94549.1|ACPCPNTER A.carterae precursor of peridinin-chlorophylla-protein (PCP) gene Length = 1272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccaaggcaaaggccaagcag 162 |||||||||||||||||||| Sbjct: 554 ccaaggcaaaggccaagcag 535
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 1308804 tgcccgtgcccgtgcccgtg 1308785
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 529066 tgcccgtgcccgtgcccgtg 529085
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgaggtcgagcagtgtgc 307 |||||||||||||||||||| Sbjct: 91987 gacgaggtcgagcagtgtgc 92006
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 142022 tgcccgtgcccgtgcccgtg 142041 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 142016 tgcccgtgcccgtgcccgtg 142035
>emb|AL031024.1|DMC196F3 Drosophila melanogaster cosmid clone 196F3 Length = 35835 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 26024 tgcccgtgcccgtgcccgtg 26043
>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor Length = 4624 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 3040 gagaggccgtggaagtgctgcgac 3063
>gb|DQ099244.1| Arachis hypogaea clone Ah-028 microsatellite sequence Length = 246 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 192 tgcccgtgcccgtgcccgtg 211
>emb|X06997.1|KLLAC12 Kluyveromyces lactis LAC12 gene for lactose permease Length = 7127 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 502 tgcccgtgcccgtgcccgtg 521
>dbj|AK135715.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420405M03 product:unclassifiable, full insert sequence Length = 2113 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 61 tgcccgtgcccgtgcccgtg 80 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 55 tgcccgtgcccgtgcccgtg 74 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 49 tgcccgtgcccgtgcccgtg 68
>gb|AF351191.1| Zea mays cultivar Hi-II D-type cyclin (cycD4) mRNA, complete cds Length = 1638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 1097 tgcccgtgcccgtgcccgtg 1116
>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence Length = 166114 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gaagagaggccgtggaaatg 235 |||||||||||||||||||| Sbjct: 88362 gaagagaggccgtggaaatg 88381
>dbj|AK165145.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330037N21 product:hypothetical protein, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 60 tgcccgtgcccgtgcccgtg 79 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 54 tgcccgtgcccgtgcccgtg 73 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 48 tgcccgtgcccgtgcccgtg 67
>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23, complete sequence Length = 158403 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 88997 tgcccgtgcccgtgcccgtg 88978 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 88991 tgcccgtgcccgtgcccgtg 88972 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 88985 tgcccgtgcccgtgcccgtg 88966
>gb|AC156609.8| Mus musculus chromosome 15, clone RP23-56E21, complete sequence Length = 118659 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 84195 tgcccgtgcccgtgcccgtg 84214 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 84189 tgcccgtgcccgtgcccgtg 84208 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 84183 tgcccgtgcccgtgcccgtg 84202 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 84177 tgcccgtgcccgtgcccgtg 84196 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 84171 tgcccgtgcccgtgcccgtg 84190
>dbj|AK029491.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921503G23 product:serine/threonine kinase 2, full insert sequence Length = 2396 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 1866 gcagcagcctgcagtgtgtg 1885
>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence Length = 162838 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggggggagacgaagagaggc 225 |||||||||||||||||||| Sbjct: 152192 ggggggagacgaagagaggc 152173
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 10996086 gtccgccctcctcgtcgccg 10996067 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cgccctcctcgtcgccgccg 108 |||||||||||||||||||| Sbjct: 346713 cgccctcctcgtcgccgccg 346694
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 19438444 gtccgccctcctcgtcgccg 19438463
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcgtcgccgccggccgcccc 116 |||||||||||||||||||| Sbjct: 25511988 tcgtcgccgccggccgcccc 25512007 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 1045486 cctcgtcgccgccggccgcc 1045505 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 959120 cctcgtcgccgccggccgcc 959139
>ref|NM_001015490.1| Drosophila melanogaster CG40306-PA.3 (CG40306), mRNA Length = 8140 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctcgtcgccgccggccgcccc 116 |||||||||||||||||| ||||| Sbjct: 359 ctcctcgtcgccgccggcagcccc 336
>ref|NM_001015489.1| Drosophila melanogaster CG40306-PB.3 (CG40306), mRNA Length = 8140 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctcgtcgccgccggccgcccc 116 |||||||||||||||||| ||||| Sbjct: 359 ctcctcgtcgccgccggcagcccc 336
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 112431 tgcccgtgcccgtgcccgtg 112412
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 5196993 tgcccgtgcccgtgcccgtg 5196974 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 5196987 tgcccgtgcccgtgcccgtg 5196968
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 cgccctcctcgtcgccgccggccg 112 |||||||||||||||||| ||||| Sbjct: 3369535 cgccctcctcgtcgccgcgggccg 3369512
>gb|AF112855.1|AF112855 Mus musculus Ste20-related kinase SMAK (SMAK) mRNA, complete cds Length = 5253 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 1888 gcagcagcctgcagtgtgtg 1907
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 127982 gtccgccctcctcgtcgccg 128001
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gagtcgctgcagcagcctgc 556 |||||||||||||||||||| Sbjct: 3413369 gagtcgctgcagcagcctgc 3413388
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 21709 cctcgtcgccgccggccgcc 21728
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 108359 cctcgtcgccgccggccgcc 108378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 21993 cctcgtcgccgccggccgcc 22012
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 51440 gagaggccgtggaagtgctgcgac 51417
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcgtcgccgccggccgcccc 116 |||||||||||||||||||| Sbjct: 30305 tcgtcgccgccggccgcccc 30324
>dbj|AP003936.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_E05 Length = 137352 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtccgccctcctcgtcgccg 105 |||||||||||||||||||| Sbjct: 89813 gtccgccctcctcgtcgccg 89794
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cgccctcctcgtcgccgccg 108 |||||||||||||||||||| Sbjct: 56227 cgccctcctcgtcgccgccg 56208
>dbj|AK104613.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D08, full insert sequence Length = 913 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 178 tgcccgtgcccgtgcccgtg 159
>dbj|AK067271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099C04, full insert sequence Length = 2699 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cctcgtcgccgccggccgcc 114 |||||||||||||||||||| Sbjct: 2243 cctcgtcgccgccggccgcc 2224
>dbj|AK065858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041E22, full insert sequence Length = 859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 182 tgcccgtgcccgtgcccgtg 163
>dbj|AK065087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L19, full insert sequence Length = 1677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgccctcctcgtcgccgccg 108 |||||||||||||||||||| Sbjct: 752 cgccctcctcgtcgccgccg 771
>gb|AC140363.3| Mus musculus BAC clone RP23-212M11 from 9, complete sequence Length = 217832 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 93817 tgcccgtgcccgtgcccgtg 93798 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 93811 tgcccgtgcccgtgcccgtg 93792 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 93805 tgcccgtgcccgtgcccgtg 93786
>dbj|AK062216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A10, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgccctcctcgtcgccgccg 108 |||||||||||||||||||| Sbjct: 82 cgccctcctcgtcgccgccg 101
>dbj|AK060804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F08, full insert sequence Length = 957 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 181 tgcccgtgcccgtgcccgtg 162
>gb|AY104381.1| Zea mays PCO099508 mRNA sequence Length = 875 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 562 tgcccgtgcccgtgcccgtg 543
>gb|AF088189.1|AF088189 Mus musculus CD4 antigen (Cd4) gene, partial sequence Length = 23108 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 14324 tgcccgtgcccgtgcccgtg 14343
>gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 of 74 of the complete sequence Length = 313035 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctcctcgtcgccgccggccgcccc 116 |||||||||||||||||| ||||| Sbjct: 287510 ctcctcgtcgccgccggcagcccc 287533
>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin inhibitor, complete cds Length = 1061 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 363 gagaggccgtggaagtgctgcgac 386
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 180707 tgcccgtgcccgtgcccgtg 180726
>dbj|AK122218.1| Mus musculus mRNA for mKIAA0204 protein Length = 5840 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 2340 gcagcagcctgcagtgtgtg 2359
>emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on chromosome 2, complete sequence Length = 199019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 31802 tgcccgtgcccgtgcccgtg 31783
>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library) complete sequence Length = 227538 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 8414 tgcccgtgcccgtgcccgtg 8433
>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20, complete sequence Length = 191218 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccctcctcgtcgccgccggc 110 |||||||||||||||||||| Sbjct: 12341 ccctcctcgtcgccgccggc 12360
>gb|AC154304.1| Mus musculus BAC clone RP24-491H15 from 16, complete sequence Length = 169500 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 95758 tgcccgtgcccgtgcccgtg 95777 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 95752 tgcccgtgcccgtgcccgtg 95771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 95746 tgcccgtgcccgtgcccgtg 95765 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 95740 tgcccgtgcccgtgcccgtg 95759 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 95734 tgcccgtgcccgtgcccgtg 95753
>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence Length = 159818 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 45589 tgcccgtgcccgtgcccgtg 45608
>gb|U54982.1|DMU54982 Drosophila melanogaster stn-A and stn-B mRNA, complete cds Length = 8136 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctcgtcgccgccggccgcccc 116 |||||||||||||||||| ||||| Sbjct: 418 ctcctcgtcgccgccggcagcccc 395
>gb|AF039574.1|AF039574 Mus musculus serine/threonine protein kinase mRNA, complete cds Length = 4279 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcagcagcctgcagtgtgtg 564 |||||||||||||||||||| Sbjct: 2004 gcagcagcctgcagtgtgtg 2023
>gb|AC118593.6| Mus musculus chromosome 19, clone RP24-464I2, complete sequence Length = 126059 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agcctgcagtgtgtgcatgt 569 |||||||||||||||||||| Sbjct: 17398 agcctgcagtgtgtgcatgt 17417 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agcctgcagtgtgtgcatgt 569 |||||||||||||||||||| Sbjct: 17320 agcctgcagtgtgtgcatgt 17339
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 74919 tgcccgtgcccgtgcccgtg 74938
>gb|AC172751.1| Mus musculus BAC clone RP23-341F9 from chromosome 14, complete sequence Length = 200222 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 139421 tgcccgtgcccgtgcccgtg 139440
>gb|M17075.1|MUSCD41 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exon 1 Length = 839 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgcccgtgcccgtgcccgtg 188 |||||||||||||||||||| Sbjct: 172 tgcccgtgcccgtgcccgtg 191
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gagaggccgtggaaatgctgcgac 242 |||||||||||||| ||||||||| Sbjct: 3010 gagaggccgtggaagtgctgcgac 2987 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,707,174 Number of Sequences: 3902068 Number of extensions: 4707174 Number of successful extensions: 96619 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94977 Number of HSP's gapped (non-prelim): 1616 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
