| Clone Name | bags16c12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | NOG1_ARATH (Q9C6I8) Probable nucleolar GTP-binding protein 1 | 56 | 3e-08 |
|---|
>NOG1_ARATH (Q9C6I8) Probable nucleolar GTP-binding protein 1| Length = 671 Score = 55.8 bits (133), Expect = 3e-08 Identities = 23/39 (58%), Positives = 34/39 (87%) Frame = +2 Query: 2 SRPIVPRKHDKDRKFTTKRMGRQLTSMGVDPTAXVNRLR 118 +R VPRK DKD+K+TTKRMGR+L++MG+DP++ ++R R Sbjct: 519 NRSTVPRKFDKDKKYTTKRMGRELSAMGLDPSSAMDRAR 557 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,216,824 Number of Sequences: 219361 Number of extensions: 158787 Number of successful extensions: 502 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 502 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 502 length of database: 80,573,946 effective HSP length: 14 effective length of database: 77,502,892 effective search space used: 1860069408 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)