ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16c09 |
|---|---|
| Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 233 bits (593), Expect = 3e-61 Identities = 109/154 (70%), Positives = 126/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 124 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 183 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 184 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 243 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+GPRM ++DGRVVSNF Sbjct: 244 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF 277
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 233 bits (593), Expect = 3e-61 Identities = 109/154 (70%), Positives = 126/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 124 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 183 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 184 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 243 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+GPRM ++DGRVVSNF Sbjct: 244 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF 277
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 233 bits (593), Expect = 3e-61 Identities = 109/154 (70%), Positives = 126/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 124 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 183 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 184 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 243 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+GPRM ++DGRVVSNF Sbjct: 244 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF 277
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 233 bits (593), Expect = 3e-61 Identities = 109/154 (70%), Positives = 126/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 124 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 183 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 184 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 243 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+GPRM ++DGRVVSNF Sbjct: 244 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF 277
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 233 bits (593), Expect = 3e-61 Identities = 109/154 (70%), Positives = 126/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 125 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 184 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 185 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCY 244 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+GPRM ++DGRVVSNF Sbjct: 245 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF 278
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 229 bits (585), Expect = 2e-60 Identities = 108/154 (70%), Positives = 125/154 (81%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGT 206 GRK NV H + + FEL+ HDVVEP+ +EVD+IYHLA PASP +Y YNPIKT+KTN +GT Sbjct: 122 GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 181 Query: 207 LNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM 386 LNMLGLAKR+GAR LL STSEVYGDP HPQ E YWGHVNPIG R+CYDEGKR AET+ Sbjct: 182 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCY 241 Query: 387 DYHRGGGVAVRIARIFNTYGPRMCLDDGRVVSNF 488 Y + GV VR+ARIFNT+G RM ++DGRVVSNF Sbjct: 242 AYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNF 275
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 70.1 bits (170), Expect = 3e-12 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 5/153 (3%) Frame = +3 Query: 9 EATSSPGRKENVAHHLRNPRFELLRHDVVEP----ILLEVDRIYHLACPASPVHYKYNPI 176 +A + G +N+A +PR+ R D+ + ++ D++ HLA + + Sbjct: 37 DALTYAGNPDNLAAVRGHPRYRFERGDICDAPGRRVMAGQDQVVHLAAESHVDRSLLDAS 96 Query: 177 KTIKTNVMGTLNMLGLAKRIG-ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYD 353 ++TNV GT +L A R G A F+ ST EVYG LEH W P+ S Y Sbjct: 97 VFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYS 151 Query: 354 EGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 K + + L + +H G+ VR+ R N YGPR Sbjct: 152 ASKASGDLLALAHHVSHGLDVRVTRCSNNYGPR 184
>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 59.3 bits (142), Expect = 5e-09 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 7/149 (4%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDV-----VEPILLEVDRIYHLACPASPVHYKYNPIKTIKT 191 G N+A +PRF +R D+ +E ++ D + H A + + Sbjct: 44 GNLRNLAEASADPRFSFVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVAS 103 Query: 192 NVMGTLNMLGLAKR--IGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKR 365 N++GT +L A R IG RFL ST EVYG W +P+ S Y K Sbjct: 104 NLVGTQVLLDAALRHHIG-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKA 157 Query: 366 TAETLTMDYHRGGGVAVRIARIFNTYGPR 452 ++ L + YH+ G+ V + R N YGPR Sbjct: 158 GSDLLALAYHQTHGMDVVVTRCSNNYGPR 186
>GM4D_SHIFL (P0AC91) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 54.7 bits (130), Expect = 1e-07 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEP-----ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H NP+F L D+ + IL EV D +Y+L + +P T + MGTL Sbjct: 52 HTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL 111 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + +G RF STSE+YG E PQKET P RS Y K A Sbjct: 112 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYW 166 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 +T++Y G+ +FN PR Sbjct: 167 ITVNYRESYGMYACNGILFNHESPR 191
>GM4D_ECOLI (P0AC88) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 54.7 bits (130), Expect = 1e-07 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEP-----ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H NP+F L D+ + IL EV D +Y+L + +P T + MGTL Sbjct: 52 HTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL 111 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + +G RF STSE+YG E PQKET P RS Y K A Sbjct: 112 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYW 166 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 +T++Y G+ +FN PR Sbjct: 167 ITVNYRESYGMYACNGILFNHESPR 191
>GM4D_ECOL6 (P0AC89) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 54.7 bits (130), Expect = 1e-07 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEP-----ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H NP+F L D+ + IL EV D +Y+L + +P T + MGTL Sbjct: 52 HTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL 111 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + +G RF STSE+YG E PQKET P RS Y K A Sbjct: 112 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYW 166 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 +T++Y G+ +FN PR Sbjct: 167 ITVNYRESYGMYACNGILFNHESPR 191
>GM4D_ECO57 (P0AC90) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 54.7 bits (130), Expect = 1e-07 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEP-----ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H NP+F L D+ + IL EV D +Y+L + +P T + MGTL Sbjct: 52 HTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTL 111 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + +G RF STSE+YG E PQKET P RS Y K A Sbjct: 112 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYW 166 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 +T++Y G+ +FN PR Sbjct: 167 ITVNYRESYGMYACNGILFNHESPR 191
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 53.9 bits (128), Expect = 2e-07 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 10/171 (5%) Frame = +3 Query: 3 RHEATSSPGRKENVAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYK 164 R+E + +A L +PRF + D+ +E + + D I L A+P+ Y Sbjct: 347 RYEIYGLDISSDAIARFLGDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYT 406 Query: 165 YNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYG--DPLEHPQKETYWGHVNPIG- 335 NP++ + + L ++ R R + STSEVYG D E ++T V PI Sbjct: 407 RNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINK 465 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 R Y K+ + + Y G+ + R FN GPR+ LD R+ S+ Sbjct: 466 QRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSS 516
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 51.2 bits (121), Expect = 1e-06 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 9/147 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 + + NPRF + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 IERFISNPRFHFIEGDINIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG--DPLEHPQKETYWGHVNPIG-VRSCYDEGKRTAE 374 L ++ + R + STSEVYG D E + ++ V PI R Y K+ + Sbjct: 413 NLKIVRYCVKYNKRIIFPSTSEVYGMCDDKEFDEDDSRL-IVGPINKQRWIYSVSKQLLD 471 Query: 375 TLTMDYHRGGGVAVRIARIFNTYGPRM 455 + Y G+ + R FN GPR+ Sbjct: 472 RVIWAYGEKEGLKFTLFRPFNWMGPRL 498
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 50.1 bits (118), Expect = 3e-06 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG-ARFLLTSTSEVYGDPL 287 E+D I HL A + NP IK+N MGTLN+ A+R + + S+S VYG Sbjct: 81 EIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNR 140 Query: 288 EHPQKETYWGHVN-PIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 + P E V+ PI S Y KR+ E + YH G+ + R F YG Sbjct: 141 KIPFSED--DRVDKPI---SLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYG 189
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 50.1 bits (118), Expect = 3e-06 Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 10/131 (7%) Frame = +3 Query: 87 DVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTS 266 ++V+ + + D I H A + + +P I TN +GT +L A++ RF ST Sbjct: 67 ELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVSTD 126 Query: 267 EVYGDPLEHPQKETYWGHVNPIGVR----------SCYDEGKRTAETLTMDYHRGGGVAV 416 EVYGD P +E GH G + S Y K ++ + + R GV Sbjct: 127 EVYGD---LPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKA 183 Query: 417 RIARIFNTYGP 449 I+ N YGP Sbjct: 184 TISNCSNNYGP 194
>GM4D2_VIBCH (Q56598) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 372 Score = 49.7 bits (117), Expect = 4e-06 Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEP-----ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H+ N F L D+ + IL EV D +Y+L + +P T + MGTL Sbjct: 52 HVDNASFILHYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTL 111 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + +G +F STSE+YG E PQKET P RS Y K A Sbjct: 112 RLLEAIRLLGLEKTTKFYQASTSELYGLVQETPQKET-----TPFYPRSPYAVAKMYAYW 166 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 + ++Y G+ +FN PR Sbjct: 167 IVVNYRESYGMYACNGILFNHESPR 191
>GM4D1_VIBCH (Q06952) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 373 Score = 49.7 bits (117), Expect = 4e-06 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 6/123 (4%) Frame = +3 Query: 102 ILLEV--DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG----ARFLLTST 263 IL EV D +Y+L + +P T + +GTL +L + +G +F ST Sbjct: 75 ILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKKTKFYQAST 134 Query: 264 SEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTY 443 SE+YG E PQKET P RS Y K A +T++Y G+ +FN Sbjct: 135 SELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRESYGIYACNGILFNHE 189 Query: 444 GPR 452 PR Sbjct: 190 SPR 192
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 49.3 bits (116), Expect = 6e-06 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 9/139 (6%) Frame = +3 Query: 60 NPRFELLRHDVVEPILL-------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML 218 +P F+ ++ D+ L+ E+D I H A + N + K N+ GT +L Sbjct: 56 SPNFKFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115 Query: 219 GLAKRIGA--RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDY 392 K G RF+ ST EVYG+ E + + + + Y K AE L M Y Sbjct: 116 EACKVTGQIRRFIHVSTDEVYGETDEDASVGNH--EASQLLPTNPYSATKAGAEMLVMAY 173 Query: 393 HRGGGVAVRIARIFNTYGP 449 R G+ V R N YGP Sbjct: 174 GRSYGLPVITTRGNNVYGP 192
>GM4D_YEREN (Q56872) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (ORF13.7) Length = 372 Score = 49.3 bits (116), Expect = 6e-06 Identities = 45/145 (31%), Positives = 61/145 (42%), Gaps = 11/145 (7%) Frame = +3 Query: 51 HLRNPRFELLRHDVVEPILL-------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTL 209 H NP F L D+ + L + D IY+L + +P T + MGTL Sbjct: 51 HEVNPHFFLHYGDLTDTSNLIRLVKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTL 110 Query: 210 NMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAET 377 +L + G RF STSE+YG E PQ+ET P RS Y K A Sbjct: 111 RLLEAVRINGLEHKTRFYQASTSELYGLVQEIPQRET-----TPFYPRSPYAVAKMYAYW 165 Query: 378 LTMDYHRGGGVAVRIARIFNTYGPR 452 +T++Y G+ +FN PR Sbjct: 166 ITVNYRESYGMYACNGILFNHESPR 190
>ARNA_YERPS (Q93PD8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 48.9 bits (115), Expect = 7e-06 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 10/171 (5%) Frame = +3 Query: 3 RHEATSSPGRKENVAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYK 164 R+E + ++ L NP F + D+ +E + + D I L A+P+ Y Sbjct: 340 RYEVYGLDIGSDAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYT 399 Query: 165 YNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYG--DPLEHPQKETYWGHVNPIG- 335 NP++ + + L ++ + R + STSEVYG D E ++T V PI Sbjct: 400 RNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINK 458 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 R Y K+ + + Y G+ + R FN GPR+ LD R+ S+ Sbjct: 459 QRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>ARNA_YERPE (Q8ZDX8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 48.9 bits (115), Expect = 7e-06 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 10/171 (5%) Frame = +3 Query: 3 RHEATSSPGRKENVAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYK 164 R+E + ++ L NP F + D+ +E + + D I L A+P+ Y Sbjct: 340 RYEVYGLDIGSDAISRFLGNPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYT 399 Query: 165 YNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYG--DPLEHPQKETYWGHVNPIG- 335 NP++ + + L ++ + R + STSEVYG D E ++T V PI Sbjct: 400 RNPLRVFELDFEENLKIVRDCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINK 458 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 R Y K+ + + Y G+ + R FN GPR+ LD R+ S+ Sbjct: 459 QRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 8/150 (5%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLE------VDRIYHLACPASPVHYKYNPIKTIK 188 G K N+ NP+ E + D+ + L E V+ + H A + + NP+ Sbjct: 35 GNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGD 89 Query: 189 TNVMGTLNMLGLAKR--IGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGK 362 NV+GT+N+L + ++ I +S VYG+P P E + PI S Y K Sbjct: 90 INVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSK 144 Query: 363 RTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 E Y+R G+ I R N YG R Sbjct: 145 YVGEEYIKLYNRLYGIEYAILRYSNVYGER 174
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 47.8 bits (112), Expect = 2e-05 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +PRF + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRL 498
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 47.8 bits (112), Expect = 2e-05 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +PRF + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRL 498
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 47.8 bits (112), Expect = 2e-05 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +PRF + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRL 498
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 47.8 bits (112), Expect = 2e-05 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +PRF + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRL 498
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 47.8 bits (112), Expect = 2e-05 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Frame = +3 Query: 36 ENVAHHLRNPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTIKTN 194 +N+ +P F+ ++ D+ L+ +D I H A + N + K N Sbjct: 50 KNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNN 109 Query: 195 VMGTLNMLGLAKRIGA--RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRT 368 + GT +L K G RF+ ST EVYG+ E + + + + Y K Sbjct: 110 IYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNH--EASQLLPTNPYSATKAG 167 Query: 369 AETLTMDYHRGGGVAVRIARIFNTYGP 449 AE L M Y R G+ V R N YGP Sbjct: 168 AEMLVMAYGRSYGLPVITTRGNNVYGP 194
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 47.0 bits (110), Expect = 3e-05 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Frame = +3 Query: 36 ENVAHHLRNPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTIKTN 194 +N+ +P F+ ++ D+ L+ +D I H A + N + K N Sbjct: 48 KNLNPSKHSPNFKFVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNN 107 Query: 195 VMGTLNMLGLAKRIGA--RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRT 368 + GT +L K G RF+ ST EVYG+ E + + + + Y K Sbjct: 108 IYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNH--EASQLLPTNPYSATKAG 165 Query: 369 AETLTMDYHRGGGVAVRIARIFNTYGP 449 AE L M Y R G+ V R N YGP Sbjct: 166 AEMLVMAYGRSYGLPVITTRGNNVYGP 192
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 46.6 bits (109), Expect = 4e-05 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +P F + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLQFTLFRPFNWMGPRL 498
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 46.6 bits (109), Expect = 4e-05 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +P F + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLQFTLFRPFNWMGPRL 498
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 46.2 bits (108), Expect = 5e-05 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Frame = +3 Query: 60 NPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLG 221 +P F + D+ +E + + D I L A+P+ Y NP++ + + L ++ Sbjct: 361 DPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVR 420 Query: 222 LAKRIGARFLLTSTSEVYG---DP-LEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMD 389 + G R + STSEVYG DP + + G +N R Y K+ + + Sbjct: 421 YCVKYGKRVVFPSTSEVYGMCQDPDFDEDRSNLVVGPINK--QRWIYSVSKQLLDRVIWA 478 Query: 390 YHRGGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 Y + G+ + R FN GPR+ LD R+ S+ Sbjct: 479 YGQ-QGLRFTLFRPFNWMGPRLDRLDSARIGSS 510
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 45.8 bits (107), Expect = 6e-05 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ + +P F + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFMNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + R FN GPR+ Sbjct: 471 DRVIWAYGEKEGLQFTLFRPFNWMGPRL 498
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 45.4 bits (106), Expect = 8e-05 Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +3 Query: 105 LLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFL-LTSTSEVYGD 281 L E + I HLA A + NP + N++G+ NML LAK I + L L STS +YG Sbjct: 74 LAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIYGA 133 Query: 282 PLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 + P E P+ + Y K++ E + Y V R F YGP Sbjct: 134 NEKIPFAEADRAD-EPM---TLYAATKKSMELMAHSYAHLYKVPTTSFRFFTVYGP 185
>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 333 Score = 44.7 bits (104), Expect = 1e-04 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 1/115 (0%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL-TSTSEVYGDPL 287 +VD + H A + P+K N G + +L + G ++++ +ST+ YG P Sbjct: 68 DVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVKYIVFSSTAATYGIPD 127 Query: 288 EHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 E P KET P + Y E K ET+ R G+ R FN G + Sbjct: 128 EIPIKET-----TPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLRYFNVAGAK 177
>RFBB_RHISN (P55462) Probable dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 44.3 bits (103), Expect = 2e-04 Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 17/149 (11%) Frame = +3 Query: 54 LRNPRFELLRHDVVEPILL-------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLN 212 LRN RF LR D+ + + + + D + HLA + ++TNV GT Sbjct: 48 LRNYRF--LRADICDRVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFT 105 Query: 213 MLGLAKRIGA----------RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGK 362 ML A++ + + L ST EVYG + Q E V+P S Y K Sbjct: 106 MLETARQYWSNLSQNRKAFFKMLHVSTDEVYGSLGDRGQFE----EVSPYDPSSPYSASK 161 Query: 363 RTAETLTMDYHRGGGVAVRIARIFNTYGP 449 ++ + R G+ V I+ N YGP Sbjct: 162 AASDHFATAWQRTYGLPVVISNCSNNYGP 190
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 43.9 bits (102), Expect = 2e-04 Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 10/148 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 ++ L +P F + D+ +E + + D + L A+P+ Y NP++ + + Sbjct: 353 ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG + G VN R Y K+ Sbjct: 413 NLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK--PRWIYSVSKQLL 470 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRM 455 + + Y G+ + FN GPR+ Sbjct: 471 DRVIWAYGEKEGLQFTLFLPFNWMGPRL 498
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 43.9 bits (102), Expect = 2e-04 Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 17/159 (10%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTI 185 G E++ NPR+ + D+ + L+ D + HLA + + + I Sbjct: 44 GNLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFI 103 Query: 186 KTNVMGTLNMLGLA----------KRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIG 335 +TN++GT ++L A KR RF ST EVYGD H + + P Sbjct: 104 RTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDL--HGTDDLFT-ETTPYA 160 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 S Y K A+ L + R + ++ N YGPR Sbjct: 161 PSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPR 199
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 43.5 bits (101), Expect = 3e-04 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 17/146 (11%) Frame = +3 Query: 60 NPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML 218 NPR+ + D+ + ++E D + HLA + ++TN++GT +L Sbjct: 50 NPRYVFEKVDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLL 109 Query: 219 GLAK----------RIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRT 368 +AK + RF ST EVYGD E + +P S Y K Sbjct: 110 EVAKNYWHTLDEAKKTTFRFHHISTDEVYGDL---SLSEPAFTEQSPYHPSSPYSASKAA 166 Query: 369 AETLTMDYHRGGGVAVRIARIFNTYG 446 + L +HR G+ V I N YG Sbjct: 167 SNHLVQAWHRTYGLPVIITNSSNNYG 192
>RFFG_ECOLI (P27830) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 43.1 bits (100), Expect = 4e-04 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 10/121 (8%) Frame = +3 Query: 117 DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLA----------KRIGARFLLTSTS 266 D + HLA + P I+TN++GT +L A K+ RF ST Sbjct: 76 DCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTD 135 Query: 267 EVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 EVYGD + ++ P S Y K +++ L + R G+ I N YG Sbjct: 136 EVYGD---LHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYG 192 Query: 447 P 449 P Sbjct: 193 P 193
>ARNA_PSEU2 (Q4ZSZ2) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 664 Score = 42.7 bits (99), Expect = 5e-04 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 9/150 (6%) Frame = +3 Query: 63 PRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGL 224 P F + D+ +E + + D + L A+P+ Y NP++ + + L ++ Sbjct: 364 PNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRY 423 Query: 225 AKRIGARFLLTSTSEVYGDPLE-HPQKETYWGHVNPIG-VRSCYDEGKRTAETLTMDYHR 398 + R + STSEVYG + + ++T V PI R Y K+ + + Y + Sbjct: 424 CVKYNKRVIFPSTSEVYGMCQDANFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQ 483 Query: 399 GGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 G+ + R FN GPR+ LD R+ S+ Sbjct: 484 -KGLQFTLFRPFNWMGPRLDRLDSARIGSS 512
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 42.7 bits (99), Expect = 5e-04 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 9/150 (6%) Frame = +3 Query: 63 PRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGL 224 P F + D+ +E + + D + L A+P+ Y NP++ + + L ++ Sbjct: 363 PNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRY 422 Query: 225 AKRIGARFLLTSTSEVYGDPLEHP-QKETYWGHVNPIG-VRSCYDEGKRTAETLTMDYHR 398 + R + STSEVYG + ++T V PI R Y K+ + + Y + Sbjct: 423 CVKYNKRVIFPSTSEVYGMCQDASFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQ 482 Query: 399 GGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 G+ + R FN GPR+ LD R+ S+ Sbjct: 483 -KGLQFTLFRPFNWMGPRLDRLDSARIGSS 511
>RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 42.7 bits (99), Expect = 5e-04 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 23/164 (14%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILL-------EVDRIYHLACPASPVHYKYNPIKTI 185 G E++A + R+ D+ + + + + D + HLA + P I Sbjct: 38 GNLESLADVSDSERYAFEHADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFI 97 Query: 186 KTNVMGTLNMLGLA----------KRIGARFLLTSTSEVYGDPLEHPQKET------YWG 317 +TN++GT +L A K+ RF ST EVYGD L HP + + Sbjct: 98 ETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTDEVYGD-LPHPDEANNNEALPLFT 156 Query: 318 HVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 S Y K +++ L + R G+ + N YGP Sbjct: 157 ETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGP 200
>RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 42.7 bits (99), Expect = 5e-04 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 16/129 (12%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLA----------KRIGARFLLTS 260 ++D + HLA + P I+TN++GT +L A K+ RF S Sbjct: 73 QLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132 Query: 261 TSEVYGDPLEHPQK----ET--YWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRI 422 T EVYGD L HP + ET + S Y K +++ L + R G+ + Sbjct: 133 TDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIV 191 Query: 423 ARIFNTYGP 449 + N YGP Sbjct: 192 SNCSNNYGP 200
>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 42.4 bits (98), Expect = 7e-04 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 17/158 (10%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTI 185 G E++ NPR+ + D+ + L+ D + HLA + + + I Sbjct: 39 GNLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFI 98 Query: 186 KTNVMGTLNMLGLA----------KRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIG 335 +TN++GT N+L A K RF ST EVYGD + + P Sbjct: 99 QTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGD---LSGTDDLFTETAPYA 155 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 S Y K +++ L + R G+ + N YGP Sbjct: 156 PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 193
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 42.4 bits (98), Expect = 7e-04 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 9/151 (5%) Frame = +3 Query: 60 NPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLG 221 +P F + D+ +E + + D + L A+P+ Y NP++ + + L ++ Sbjct: 362 HPNFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVR 421 Query: 222 LAKRIGARFLLTSTSEVYGDPLE-HPQKETYWGHVNPIG-VRSCYDEGKRTAETLTMDYH 395 + R + STSEVYG + + ++T V PI R Y K+ + + Y Sbjct: 422 YCVKYNKRVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY- 480 Query: 396 RGGGVAVRIARIFNTYGPRM-CLDDGRVVSN 485 G+ + R FN GPR+ LD R+ S+ Sbjct: 481 GAKGLNFTLFRPFNWMGPRLDRLDSARIGSS 511
>EXOB_RHILT (Q59745) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 327 Score = 42.4 bits (98), Expect = 7e-04 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Frame = +3 Query: 168 NPIKTIKTNVMGTLNMLGLAKRIGAR-FLLTSTSEVYGDPLEHPQKETY-WGHVNPIGVR 341 +P+ + NV+GTL +L A+ G F+ +ST YG P P ET+ +NP Sbjct: 87 DPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVPINP---- 142 Query: 342 SCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 Y K E DY + G + + R FN G Sbjct: 143 --YGRTKYIVEQALADYDQYGSLRSVVLRYFNAAG 175
>NOEL_RHISN (P55354) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 351 Score = 42.4 bits (98), Expect = 7e-04 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 4/113 (3%) Frame = +3 Query: 123 IYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLE 290 IY+LA + P T + +GTL ML + +G RF STSE+YG E Sbjct: 85 IYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGLTNRTRFYQASTSELYGLAQE 144 Query: 291 HPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 PQ E P RS Y K A + ++Y G+ +FN P Sbjct: 145 SPQNEK-----TPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNGILFNHESP 192
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 42.0 bits (97), Expect = 9e-04 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 10/155 (6%) Frame = +3 Query: 42 VAHHLRNPRFELLRHDV------VEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMG 203 V + N +F ++ D+ V+ + + D I L A P+ Y NP+K K + Sbjct: 352 VKSFIGNEKFCFIKGDIKQYYNWVKKKIKKCDIILPLIAIARPMQYIKNPLKVFKIDFEE 411 Query: 204 TLNMLGLAKRIGARFLLTSTSEVYG----DPLEHPQKETYWGHVNPIGVRSCYDEGKRTA 371 L ++ + R + STSEVYG D + G + R Y K+ Sbjct: 412 NLKIIRYCVKYKKRIIFPSTSEVYGMCKDDYFDEENSNLVTGAIK--NQRWIYSSSKQLL 469 Query: 372 ETLTMDYHRGGGVAVRIARIFNTYGPRMCLDDGRV 476 + + Y + I R FN GP LDD ++ Sbjct: 470 DRIIWAYGVKNNLNFTIFRPFNWIGPG--LDDFKI 502
>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose| 2-epimerase) Length = 338 Score = 42.0 bits (97), Expect = 9e-04 Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 14/159 (8%) Frame = +3 Query: 18 SSPGRKENVAHHLRNPRFELLRHDVVEPILLEV-DRIYHLACPASPVHYKYNPIKTIKTN 194 SS G E V +RN ++DV I + D +HLA + NP + N Sbjct: 46 SSLGNFEFVHGDIRN------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEIN 99 Query: 195 VMGTLNMLGLAKRIGA--RFLLTSTSEVYGDPLEHPQKETY-----------WGHVNPIG 335 V GTLN+L ++ + + +ST++VYGD ++ ET + + Sbjct: 100 VGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 S Y K A+ +DY R G+ + R + YG R Sbjct: 160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGR 198
>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 42.0 bits (97), Expect = 9e-04 Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 16/127 (12%) Frame = +3 Query: 117 DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLA----------KRIGARFLLTSTS 266 D + HLA + P I+TN++GT +L +A K+ RF ST Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134 Query: 267 EVYGDPLEHPQKE------TYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIAR 428 EVYGD L HP + + S Y K +++ L + R G+ + Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193 Query: 429 IFNTYGP 449 N YGP Sbjct: 194 CSNNYGP 200
>RFBB1_ECOLI (P37759) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 42.0 bits (97), Expect = 9e-04 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVE-PILLEV------DRIYHLACPASPVHYKYNPIKTI 185 G +E++A + R+ D+ + P + + D + HLA + P I Sbjct: 38 GNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFI 97 Query: 186 KTNVMGTLNMLGLA----------KRIGARFLLTSTSEVYGDPLEHP------QKETYWG 317 +TN++GT +L A K+ RF ST EVYGD L HP ++ + Sbjct: 98 ETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGD-LPHPDEVNNTEELPLFT 156 Query: 318 HVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 S Y K +++ L + R G+ + N YGP Sbjct: 157 ETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGP 200
>RFBG_SALTY (P26397) CDP-glucose 4,6-dehydratase (EC 4.2.1.45)| Length = 359 Score = 41.6 bits (96), Expect = 0.001 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Frame = +3 Query: 69 FELLRHDVVEPILLEVDRIYHLAC-PASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG-A 242 FE LR+ + E + + ++H+A P + Y+ PI+T TNVMGT+++L K++G Sbjct: 69 FEKLRNSIAE---FKPEIVFHMAAQPLVRLSYE-QPIETYSTNVMGTVHLLETVKQVGNI 124 Query: 243 RFLLTSTSEVYGDPLEHPQKETYWGH--VNPIGVRSCYDEGKRTAE 374 + ++ TS+ D +E WG+ P+G Y K AE Sbjct: 125 KAVVNITSDKCYD-----NREWVWGYRENEPMGGYDPYSNSKGCAE 165
>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 41.6 bits (96), Expect = 0.001 Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%) Frame = +3 Query: 27 GRKENVAHHLRNPRFELLRHDVVEPILLE-------VDRIYHLACPASPVHYKYNPIKTI 185 G E++ NPR+ + D+ + L+ D + HLA + + + I Sbjct: 39 GNLESLTEVADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFI 98 Query: 186 KTNVMGTLNMLGLAKRI----------GARFLLTSTSEVYGDPLEHPQKETYWGHVNPIG 335 +TN++GT N+L A+ RF ST EVYGD + + P Sbjct: 99 QTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGD---LGGTDDLFTETAPYA 155 Query: 336 VRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 S Y K +++ L + R G+ + N YGP Sbjct: 156 PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 193
>NOEL_RHIFR (O85713) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 351 Score = 41.6 bits (96), Expect = 0.001 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 4/113 (3%) Frame = +3 Query: 123 IYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLE 290 IY+LA + P T + +GTL ML + +G RF STSE+YG E Sbjct: 85 IYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGLIHRTRFYQASTSELYGLAQE 144 Query: 291 HPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 PQ E P RS Y K A + ++Y G+ +FN P Sbjct: 145 IPQNEK-----TPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNGILFNHESP 192
>RFBB_XANCP (P55295) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 351 Score = 40.4 bits (93), Expect = 0.003 Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 10/99 (10%) Frame = +3 Query: 183 IKTNVMGTLNMLGLAK----------RIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPI 332 I+TNV+GTL +L + R RFL ST EVYG L K T P Sbjct: 97 IQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYG-TLGETGKFT---ETTPY 152 Query: 333 GVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 S Y K ++ L +H G+ V N YGP Sbjct: 153 APNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGP 191
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 40.0 bits (92), Expect = 0.003 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Frame = +3 Query: 102 ILLEVDRIYHLACPASPVHYKYNPIKTIK---TNVMGTLNMLGLAKRIGA-RFLLTSTSE 269 +L EV++I + A+ H + ++ + NV GT ++ A G +F+ ST E Sbjct: 85 LLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDE 144 Query: 270 VYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 VYG L+ E+ +P + Y K AE Y V I R N YGP Sbjct: 145 VYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGP 199 Query: 450 RMCLDDGRVVSNF 488 + RV+ F Sbjct: 200 HQYPE--RVIPKF 210
>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 332 Score = 40.0 bits (92), Expect = 0.003 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL-TSTSEVYGDPL 287 +VD + H A + P+K N G + +L + G ++++ +ST+ YG P Sbjct: 68 DVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTAATYGIPE 127 Query: 288 EHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPRM 455 E P ET NPI + Y E K ET+ + G+ R FN G + Sbjct: 128 EIPILET--TPQNPI---NPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGANL 178
>GALE_MYCGE (P47364) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 340 Score = 39.7 bits (91), Expect = 0.004 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Frame = +3 Query: 81 RHDVVEPIL-LEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRI--GARFL 251 RH + E I ++ D ++H A S +NP+K NV+GTLN++ + + Sbjct: 64 RHKLTEVIAAIQPDVVFHFAAKTSVSESVHNPLKYFDCNVIGTLNLISAISNLQKPIKLF 123 Query: 252 LTSTSEVYGDPLEHPQKE----TYWGHVNPIGVRSCYDE 356 S++ VYG E T NP G+ DE Sbjct: 124 FASSAAVYGQTTNSYISEEIVITETQATNPYGLSKFLDE 162
>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 39.3 bits (90), Expect = 0.006 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 180 TIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSC 347 T + +GTL +L K G +F STSE+YG E PQKET P RS Sbjct: 124 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSP 178 Query: 348 YDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 Y K A + +++ + +FN PR Sbjct: 179 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR 213
>GMD2_CAEEL (O45583) Probable GDP-mannose 4,6 dehydratase 2 (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (GMD) Length = 382 Score = 39.3 bits (90), Expect = 0.006 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 9/124 (7%) Frame = +3 Query: 108 LEVDRIYHLACPASPVHYKYN---PIKTIKTNVMGTLNMLG------LAKRIGARFLLTS 260 +E IYHLA + H K + P T + + +GTL +L L +++ RF S Sbjct: 111 IEPTEIYHLAAQS---HVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLTEKV--RFYQAS 165 Query: 261 TSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNT 440 TSE+YG E PQ E + P RS Y K + ++Y + +FN Sbjct: 166 TSELYGKVQEIPQSE-----LTPFYPRSPYAVAKMYGYWIVVNYREAYKMFACNGILFNH 220 Query: 441 YGPR 452 PR Sbjct: 221 ESPR 224
>GMD1_CAEEL (Q18801) Probable GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (GMD) Length = 399 Score = 38.9 bits (89), Expect = 0.007 Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 9/124 (7%) Frame = +3 Query: 108 LEVDRIYHLACPASPVHYKYN---PIKTIKTNVMGTLNMLG------LAKRIGARFLLTS 260 +E +YHLA + H K + P T + + +GTL +L L +++ RF S Sbjct: 128 IEPTEVYHLAAQS---HVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLTEKV--RFYQAS 182 Query: 261 TSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNT 440 TSE+YG E PQ E P RS Y K + ++Y + +FN Sbjct: 183 TSELYGKVQEIPQSEK-----TPFYPRSPYAVAKMYGYWIVVNYREAYNMFACNGILFNH 237 Query: 441 YGPR 452 PR Sbjct: 238 ESPR 241
>GMDS_MOUSE (Q8K0C9) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 38.9 bits (89), Expect = 0.007 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 180 TIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSC 347 T + +GTL +L K G +F STSE+YG E PQKET P RS Sbjct: 124 TADVDGVGTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSP 178 Query: 348 YDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 Y K A + +++ + +FN PR Sbjct: 179 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR 213
>GMDS_CRIGR (Q8K3X3) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 38.9 bits (89), Expect = 0.007 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 180 TIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSC 347 T + +GTL +L K G +F STSE+YG E PQKET P RS Sbjct: 124 TADVDGVGTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSP 178 Query: 348 YDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 Y K A + +++ + +FN PR Sbjct: 179 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR 213
>Y1061_METJA (Q58461) Hypothetical protein MJ1061| Length = 333 Score = 37.4 bits (85), Expect = 0.022 Identities = 28/120 (23%), Positives = 50/120 (41%) Frame = +3 Query: 87 DVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTS 266 D ++ + EVD ++H A +YNP + +KTNV+GT N++ +A +T ++ Sbjct: 72 DRLKRAIEEVDVVFHAAALKHVPLCEYNPFEAVKTNVIGTQNLIEVAMDEEVEKFITIST 131 Query: 267 EVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 + +P VN +G E + L + VR + N+ G Sbjct: 132 DKAVNP------------VNVMGATKLLAERLTISANLYKGKRKTAFSVVRFGNVLNSRG 179
>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 331 Score = 36.6 bits (83), Expect = 0.037 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGAR-FLLTSTSEVYGDPL 287 ++D I H A + +P+K N G + +L + G + + +ST+ YG+P Sbjct: 66 KIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPK 125 Query: 288 EHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPRMCLDD 467 + P KET +P + Y E K E + G+ R FN G + D Sbjct: 126 QVPIKET-----DPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYFNVAG---AMPD 177 Query: 468 GRV 476 G + Sbjct: 178 GSI 180
>GMDS_DROME (Q9VMW9) Probable GDP-mannose 4,6 dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) (Dm-gmd) Length = 395 Score = 36.2 bits (82), Expect = 0.048 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 4/95 (4%) Frame = +3 Query: 180 TIKTNVMGTLNMLGLAKRIG----ARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSC 347 T + + +GTL +L + G RF STSE+YG +E PQ E P RS Sbjct: 147 TAEVDAVGTLRILDAIRTCGMEKNVRFYQASTSELYGKVVETPQNEQ-----TPFYPRSP 201 Query: 348 YDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 Y K + ++Y + +FN PR Sbjct: 202 YACAKMYGFWIVINYREAYNMYACNGILFNHESPR 236
>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 330 Score = 35.8 bits (81), Expect = 0.063 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%) Frame = +3 Query: 60 NPRFELLRHDVVEPILL-------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML 218 +P+ + + D+ + L+ ++D + H A + P+K NV G +++L Sbjct: 42 DPKAKFYQGDIEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLL 101 Query: 219 GLAKRIGARFLL-TSTSEVYGDPLEHP-QKETYWGHVNPIGVRSCYDEGKRTAETLTMDY 392 ++L+ +S++ YG P + P ++T +NP Y E K E + Sbjct: 102 QAMNDANVKYLVFSSSAATYGIPKKLPITEDTPLNPINP------YGETKMMMEKIMAWA 155 Query: 393 HRGGGVAVRIARIFNTYG 446 + G+ R FN G Sbjct: 156 DKADGIKYTALRYFNVAG 173
>Y513_MYCBO (P0A5D2) Hypothetical protein Mb0513| Length = 376 Score = 35.4 bits (80), Expect = 0.082 Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Frame = +3 Query: 57 RNPRFELLRHDVVEPILL------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML 218 R R E +R D+ P + EVD + H A AS + NVMG + + Sbjct: 67 RMGRAEFVRADIRNPFIAKVIRNGEVDTVVHAAA-ASYAPRSGGSAALKELNVMGAMQLF 125 Query: 219 GLAKRIGA--RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDY 392 ++ + R +L STSEVYG P T R + +G Y Sbjct: 126 AACQKAPSVRRVVLKSTSEVYGSSPHDPVMFT-----EDSSSRRPFSQGFPKDSLDIEGY 180 Query: 393 HRGGG-----VAVRIARIFNTYGPRM 455 R G +AV I R+ N GP M Sbjct: 181 VRALGRRRPDIAVTILRLANMIGPAM 206
>Y501_MYCTU (P0A5D1) Hypothetical protein Rv0501/MT0522| Length = 376 Score = 35.4 bits (80), Expect = 0.082 Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Frame = +3 Query: 57 RNPRFELLRHDVVEPILL------EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML 218 R R E +R D+ P + EVD + H A AS + NVMG + + Sbjct: 67 RMGRAEFVRADIRNPFIAKVIRNGEVDTVVHAAA-ASYAPRSGGSAALKELNVMGAMQLF 125 Query: 219 GLAKRIGA--RFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDY 392 ++ + R +L STSEVYG P T R + +G Y Sbjct: 126 AACQKAPSVRRVVLKSTSEVYGSSPHDPVMFT-----EDSSSRRPFSQGFPKDSLDIEGY 180 Query: 393 HRGGG-----VAVRIARIFNTYGPRM 455 R G +AV I R+ N GP M Sbjct: 181 VRALGRRRPDIAVTILRLANMIGPAM 206
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 35.0 bits (79), Expect = 0.11 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Frame = +3 Query: 102 ILLEVDRIYHLACPASPVHYKYNPIKTIK---TNVMGTLNMLGLAKRIGA-RFLLTSTSE 269 +L E ++I + A+ H + ++ + NV GT ++ A +F+ ST E Sbjct: 85 LLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDE 144 Query: 270 VYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 VYG L+ E+ +P + Y K AE Y V I R N YGP Sbjct: 145 VYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGP 199
>VIPB_SALTI (Q04973) Vi polysaccharide biosynthesis protein vipB/tviC| Length = 348 Score = 34.7 bits (78), Expect = 0.14 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 2/115 (1%) Frame = +3 Query: 114 VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG-ARFLLTSTSEVYGDPLE 290 VD + H A S +PI T N+ G LNML A+ + F ++S YGD + Sbjct: 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPD 150 Query: 291 HPQKETYWGH-VNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGPR 452 P+ E G ++P V +E + +++ G R FN +G R Sbjct: 151 LPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIG------LRYFNVFGRR 199
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 34.3 bits (77), Expect = 0.18 Identities = 19/68 (27%), Positives = 25/68 (36%) Frame = -2 Query: 468 HHPGTYEGHMY*RYEQFVPQHHHHDGSP*SRSLLFFCPHHSNF*HL*D*HAPNKSPSADA 289 HHP + H+ + HHHH +P PHH + H HAP+ Sbjct: 157 HHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH----HAPHHHHHHHH 212 Query: 288 QVGHHKLH 265 HH H Sbjct: 213 APHHHHHH 220 Score = 32.3 bits (72), Expect = 0.70 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = -2 Query: 477 PHDHHPGTYEGHMY*RYEQFVPQHHHHDGSP*SRSLLFFCPHHSNF*H 334 PH HH + H + + HHHH +P PHH + H Sbjct: 174 PHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221
>GAL10_KLULA (P09609) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 688 Score = 34.3 bits (77), Expect = 0.18 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL-TSTSEVYGDPL 287 ++D + H A + P+ N++GT+N+L K + L+ +S++ VYGD Sbjct: 77 KIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDAT 136 Query: 288 EH----PQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYH-RGGGVAVRIARIFNTYG 446 P ET P G + Y + K T E + D H + I R FN G Sbjct: 137 RFENMIPIPETC-----PTGPTNPYGKTKLTIEDMMRDLHFSDKSFSFAILRYFNPIG 189
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 334 Score = 33.9 bits (76), Expect = 0.24 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Frame = +3 Query: 114 VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML-GLAKRIGARFLLTSTSEVYGDPLE 290 +D + H A + PI+ + NV+GT +L + + + + +ST+ YG+P++ Sbjct: 66 IDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVKKIVFSSTAATYGEPVQ 125 Query: 291 HPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 P +E+ +P + Y E K E + G+ R FN G Sbjct: 126 IPIQES-----DPTIPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYFNAAG 172
>CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein capD| Length = 599 Score = 33.1 bits (74), Expect = 0.41 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Frame = +3 Query: 123 IYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKR-IGARFLLTSTSEVYGDPLEHPQ 299 +YH A +YNP + I+ N++GT N+ AK ++F++ ST + Sbjct: 361 VYHAAAHKHVPLMEYNPHEAIRNNILGTKNVAESAKEGEVSKFVMISTDKA--------- 411 Query: 300 KETYWGHVNPIGVRSCYDEGKRTAE----TLTMDYHRGGGVAVRIARIFNTYG 446 VNP V KR AE +L D + VAVR + + G Sbjct: 412 -------VNPSNVMGA---TKRIAEMVIQSLNEDNSKTSFVAVRFGNVLGSRG 454
>STRL_STRGR (P29781) dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)| (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) Length = 304 Score = 32.3 bits (72), Expect = 0.70 Identities = 24/93 (25%), Positives = 37/93 (39%) Frame = +3 Query: 171 PIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCY 350 P + N G ++ + +GA L ST V+ P +E + P G R+ Y Sbjct: 77 PALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDH-----PTGPRTVY 131 Query: 351 DEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 KR E ++ G VR A ++ GP Sbjct: 132 GCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGP 164
>GAL1_KLULA (P09608) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 503 Score = 32.3 bits (72), Expect = 0.70 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 346 QLLTPIGLTCPQ*VSFCGCSSGSP*TSLVLVNKNLAPIRFARPNIFK 206 + L P G T V CGC S S T L L N P+RF R +F+ Sbjct: 332 ETLDPNGYTLDHAVELCGCESISQFTELYLTN---FPVRFQRLKLFQ 375
>GALE_YEREN (Q57301) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 336 Score = 30.8 bits (68), Expect = 2.0 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = +3 Query: 111 EVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNML-GLAKRIGARFLLTSTSEVYGDPL 287 ++D + H A S PI+ + NV+G++ +L + + + +S++ VYG+P Sbjct: 73 KIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVKKLIFSSSATVYGEPE 132 Query: 288 EHP--QKETYWGHVNPIG 335 P +K G NP G Sbjct: 133 FVPLTEKARIGGTTNPYG 150
>GALE_MYCPN (P75517) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 30.4 bits (67), Expect = 2.7 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 6/116 (5%) Frame = +3 Query: 117 DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRI--GARFLLTSTSEVYGDPLE 290 D ++H A S P+ N++GTLN+L K + + +ST+ V+G Sbjct: 76 DVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQKPIQLFFSSTAAVFGSAST 135 Query: 291 HPQKETYWGH----VNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYG 446 P E NP G+ E +TLT H V R FN G Sbjct: 136 LPIPENLVLEETLASNPYGISKFLSE--IVLQTLTRSPH----FQVIALRYFNVAG 185
>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 329 Score = 30.4 bits (67), Expect = 2.7 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +3 Query: 108 LEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL-TSTSEVYGDP 284 L D + H A + P K NV GT+ +L + G R L+ +ST+ YG+P Sbjct: 68 LSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVRRLVFSSTAATYGEP 127 Query: 285 LEHPQKET 308 + P E+ Sbjct: 128 EQVPIVES 135
>IF2_XYLFA (Q9PGR3) Translation initiation factor IF-2| Length = 892 Score = 30.4 bits (67), Expect = 2.7 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +3 Query: 249 LLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAV 416 LL T EV+G+P+ P T GHV D GK T +DY R +AV Sbjct: 378 LLAHTEEVHGEPVPRPPVVTIMGHV---------DHGK----TSLLDYIRRTKIAV 420
>HLDD_VIBVY (Q7MPN6) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 313 Score = 29.6 bits (65), Expect = 4.5 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 9/78 (11%) Frame = +3 Query: 246 FLLTSTSEVYGDPLEHPQKETYWGHVNPIG---------VRSCYDEGKRTAETLTMDYHR 398 FL S++ YG+ ++ Y G +N G VR + + + ETL+ Sbjct: 111 FLYASSAATYGETTVFKEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQ---- 166 Query: 399 GGGVAVRIARIFNTYGPR 452 + R FN YGPR Sbjct: 167 -----ITGFRYFNVYGPR 179
>HLDD_VIBVU (Q8DE09) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 313 Score = 29.6 bits (65), Expect = 4.5 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 9/78 (11%) Frame = +3 Query: 246 FLLTSTSEVYGDPLEHPQKETYWGHVNPIG---------VRSCYDEGKRTAETLTMDYHR 398 FL S++ YG+ ++ Y G +N G VR + + + ETL+ Sbjct: 111 FLYASSAATYGETTVFKEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQ---- 166 Query: 399 GGGVAVRIARIFNTYGPR 452 + R FN YGPR Sbjct: 167 -----ITGFRYFNVYGPR 179
>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 1) (GMD 1) Length = 361 Score = 29.6 bits (65), Expect = 4.5 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 6/128 (4%) Frame = +3 Query: 87 DVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA------RF 248 DV++P D +Y+LA + P T G L +L + ++ Sbjct: 91 DVIKP-----DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHNIDNGRAIKY 145 Query: 249 LLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIAR 428 +SE++G PQ ET P RS Y K A T++Y G+ Sbjct: 146 YQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLYACNGI 199 Query: 429 IFNTYGPR 452 +FN PR Sbjct: 200 LFNHESPR 207
>HLDD_DESVH (Q72ET7) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 323 Score = 29.6 bits (65), Expect = 4.5 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%) Frame = +3 Query: 111 EVDRIYHL-ACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGD-P 284 +VD + H+ AC A+ + + ++ N+ + + L GARF+ S++ YGD Sbjct: 68 DVDAVVHMGACSATT---ERDADFLMENNLRYSRMLCELCMETGARFINASSAATYGDGS 124 Query: 285 LEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIARIFNTYGP 449 L +T + P+ + Y K+ + Y G + + FN YGP Sbjct: 125 LGFSDDDTTMLRLKPLNM---YGYSKQLFDLWA--YREGRLDGIASLKFFNVYGP 174
>IF2_XYLFT (Q87EV4) Translation initiation factor IF-2| Length = 892 Score = 29.3 bits (64), Expect = 5.9 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +3 Query: 249 LLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAV 416 LL T E++G+P+ P T GHV D GK T +DY R +AV Sbjct: 378 LLAHTEELHGEPVPRPPVVTIMGHV---------DHGK----TSLLDYIRRTKIAV 420
>GMD2_ARATH (P93031) GDP-mannose 4,6 dehydratase 2 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 2) (GMD 2) Length = 373 Score = 29.3 bits (64), Expect = 5.9 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 6/128 (4%) Frame = +3 Query: 87 DVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIG------ARF 248 DV++P D +Y+LA + P T G L +L + ++ Sbjct: 103 DVIKP-----DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKY 157 Query: 249 LLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYHRGGGVAVRIAR 428 +SE++G PQ ET P RS Y K A T++Y G+ Sbjct: 158 YQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGI 211 Query: 429 IFNTYGPR 452 +FN PR Sbjct: 212 LFNHESPR 219
>GALE1_CYATE (O65780) UDP-glucose 4-epimerase GEPI42 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 354 Score = 29.3 bits (64), Expect = 5.9 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 3/113 (2%) Frame = +3 Query: 117 DRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA-RFLLTSTSEVYGDPLEH 293 D + H A NP N++ T+N+ + + + +++S++ VYG P + Sbjct: 88 DAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVMSKFNCKKLVISSSATVYGQPDQI 147 Query: 294 PQKETYWGH-VNPIGVRSCYDEGKRTAETLTMDYHRGGGV-AVRIARIFNTYG 446 P E H +NP Y K E + D R + + R FN G Sbjct: 148 PCVEDSNLHAMNP------YGRSKLFVEEVARDIQRAEAEWRIILLRYFNPVG 194
>HEMA_CDVO (P24306) Hemagglutinin glycoprotein| Length = 604 Score = 28.9 bits (63), Expect = 7.7 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Frame = +3 Query: 153 VHYKYNPIKTIKTNVMGTLNMLGLAKRIGAR---FLLTSTSEVYGD---PLEHPQKETYW 314 +H+ NP T+K N +G+ K I + LL++ S GD P T Sbjct: 136 LHWCINPPSTVKVNFTNYCESIGIRKAIASAANPILLSALSGGRGDIFPPHRCSGATTSV 195 Query: 315 GHVNPIGVRSCYDEGKRTAETLTM 386 G V P+ V RT+E + M Sbjct: 196 GKVFPLSVSLSMSLISRTSEVINM 219
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 28.9 bits (63), Expect = 7.7 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = -2 Query: 477 PHDHHPGTYEGHMY*RYEQFVPQHHHHDGSP 385 PH HHP + H + + Q HH H P Sbjct: 361 PHGHHPHAHHPHEHDTHRQHPHGHHPHGHHP 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,379,465 Number of Sequences: 219361 Number of extensions: 1489963 Number of successful extensions: 4194 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 3950 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4107 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
