ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (... 37 0.031
2PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf... 37 0.031
3PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC... 32 0.98
4PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf... 32 1.3
5HEX8_ADE03 (P11324) Hexon-associated protein precursor (Protein ... 32 1.7
6BAIP3_HUMAN (O94812) BAI1-associated protein 3 (BAP3) 32 1.7
7FUS1_YEAST (P11710) Nuclear fusion protein FUS1 31 2.9
8ASB1_HUMAN (Q9Y576) Ankyrin repeat and SOCS box protein 1 (ASB-1) 30 4.9
9APOA_MACMU (P14417) Apolipoprotein(a) (EC 3.4.21.-) (Apo(a)) (Lp... 30 4.9
10BAIP3_MOUSE (Q80TT2) BAI1-associated protein 3 (BAP3) 30 6.4
11CIPA_CLOTM (Q06851) Cellulosomal scaffolding protein A precursor... 29 8.3

>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 399 QVLDVGCGVASFSAYLL-PLDIHTMSFAPKDGHENQIQFALERGIGAMISV 548
           +VLDVGCG+     Y+    D+H +     D   N I FALER IG   SV
Sbjct: 285 KVLDVGCGIGGGDFYMAEKFDVHVVGI---DLSVNMISFALERAIGLSCSV 332



to top

>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 399 QVLDVGCGVASFSAYLLP-LDIHTMSFAPKDGHENQIQFALERGIGAMISV 548
           +VLDVGCG+     Y+    D+H +     D   N I FALER IG   SV
Sbjct: 269 KVLDVGCGIGGGDFYMAENFDVHVVGI---DLSVNMISFALERAIGLKCSV 316



to top

>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +3

Query: 399 QVLDVGCGVASFSAYLLPLDIHTMSFAPKDGHENQIQFALERGIGAMISV 548
           +VLDVGCG+     Y+   + + +     D   N I FALER IG   +V
Sbjct: 288 KVLDVGCGIGGGDFYM--AENYDVEVVGIDLSINMISFALERSIGLKCAV 335



to top

>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 399 QVLDVGCGVASFSAYLLP-LDIHTMSFAPKDGHENQIQFALERGIGAMISV 548
           +VLDVGCG+     Y+    D+  +     D   N I FALE  IG   SV
Sbjct: 284 KVLDVGCGIGGGDFYMAENFDVDVVGI---DLSVNMISFALEHAIGLKCSV 331



to top

>HEX8_ADE03 (P11324) Hexon-associated protein precursor (Protein VIII) (pVIII)|
           (Fragment)
          Length = 135

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
 Frame = +3

Query: 297 GGGTHFKHGATEYIERL---------GNMTTNSTGDLRSAGVVQVLDVGCGVASFSAYLL 449
           GG    +H   + I+RL          + + +S+  LR  GV Q+   GCG +SF+    
Sbjct: 18  GGSALCRHRPQQSIKRLVIRGRGIQLNDESVSSSLGLRPDGVFQI--AGCGRSSFTPRQA 75

Query: 450 PLDIHTMSFAPKDGHENQIQFALE 521
            L + + S  P+ G    +QF  E
Sbjct: 76  VLTLESSSSQPRSGGIGTLQFVEE 99



to top

>BAIP3_HUMAN (O94812) BAI1-associated protein 3 (BAP3)|
          Length = 1187

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -1

Query: 567 VIALWPTQRSSHQSHALKQTGFDSHGHLLARMT*YEYLGEEDKQRSWQHRIQHPKLEQLL 388
           V+ L  TQR +  S    ++GF SH  LL+ +   E+  EE    SW+  +  P    L 
Sbjct: 383 VLKLITTQRDTAMSQR-GRSGFLSHLLLLSHLLRLEHSAEEPNSSSWRGELSTPAATILC 441

Query: 387 LNG 379
           L+G
Sbjct: 442 LHG 444



to top

>FUS1_YEAST (P11710) Nuclear fusion protein FUS1|
          Length = 512

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 138 FCLVPPPNDYKIPIRWPTSRDYVWRSNVNHSHLSEVKGGQNWVHENGKLWWFPGGGTHFK 317
           F    PPN   I    P+  D   +  V+ S  + +K  + W +E+    WF  G T+FK
Sbjct: 212 FLYTKPPNIVHIESSMPSYNDLPSQKTVS-SKKTALKTSEKWSYESPLSRWFLRGSTYFK 270



to top

>ASB1_HUMAN (Q9Y576) Ankyrin repeat and SOCS box protein 1 (ASB-1)|
          Length = 335

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 15  PLEHNEYVPCHDAAYVSKLRELDRSRHENLEAKCPPREESLFC 143
           PLEH E    HDAAYV  L+ L RS  +    +    E+S++C
Sbjct: 32  PLEHCEDTRLHDAAYVGDLQTL-RSLLQEESYRSRINEKSVWC 73



to top

>APOA_MACMU (P14417) Apolipoprotein(a) (EC 3.4.21.-) (Apo(a)) (Lp(a)) (Fragment)|
          Length = 1420

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 275  ILMHPILSSFYLRKV*MVHITTPYIVPTCWPSYRYLVVVWWRHQTEQALLSW 120
            + + PI +   L K+    I T  ++P C PS  Y++  W    TE  +  W
Sbjct: 1267 LFLEPIGADIALLKLSRPAIITDKVIPACLPSPNYVITAW----TECYITGW 1314



to top

>BAIP3_MOUSE (Q80TT2) BAI1-associated protein 3 (BAP3)|
          Length = 1134

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = -1

Query: 567 VIALWPTQRSSHQSHALKQTGFDSHGHLLARMT*YEYLGEEDKQRSWQHRIQHPKLEQLL 388
           V+ L  TQR +  +    ++GF S+  LL+R+  +E+  EE    SW+  +  P    L 
Sbjct: 346 VLKLITTQRDTVMNQR-GRSGFLSYLLLLSRVLRFEHRVEEPNSSSWRGELSGPGTTVLC 404

Query: 387 LNG 379
           L+G
Sbjct: 405 LHG 407



to top

>CIPA_CLOTM (Q06851) Cellulosomal scaffolding protein A precursor (Cellulosomal|
            glycoprotein S1/SL) (Cellulose-integrating protein A)
            (Cohesin)
          Length = 1853

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -1

Query: 264  PNSVLLLPQKGVNGSHYYAIHSPDLLAIL*VSCSRLVEAPNRTSS 130
            P ++  +PQKG+    +   + P++L I+ +    L+  PN T S
Sbjct: 1567 PVNLYGVPQKGIASGDFVVSYDPNVLEIIEIEPGELIVDPNPTKS 1611


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,474,486
Number of Sequences: 219361
Number of extensions: 1951312
Number of successful extensions: 5080
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5075
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top