| Clone Name | bags16c08 |
|---|---|
| Clone Library Name | barley_pub |
>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)| (PEAMT 1) (AtNMT1) Length = 491 Score = 37.4 bits (85), Expect = 0.031 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +3 Query: 399 QVLDVGCGVASFSAYLL-PLDIHTMSFAPKDGHENQIQFALERGIGAMISV 548 +VLDVGCG+ Y+ D+H + D N I FALER IG SV Sbjct: 285 KVLDVGCGIGGGDFYMAEKFDVHVVGI---DLSVNMISFALERAIGLSCSV 332
>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC| 2.1.1.103) Length = 475 Score = 37.4 bits (85), Expect = 0.031 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +3 Query: 399 QVLDVGCGVASFSAYLLP-LDIHTMSFAPKDGHENQIQFALERGIGAMISV 548 +VLDVGCG+ Y+ D+H + D N I FALER IG SV Sbjct: 269 KVLDVGCGIGGGDFYMAENFDVHVVGI---DLSVNMISFALERAIGLKCSV 316
>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)| Length = 494 Score = 32.3 bits (72), Expect = 0.98 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +3 Query: 399 QVLDVGCGVASFSAYLLPLDIHTMSFAPKDGHENQIQFALERGIGAMISV 548 +VLDVGCG+ Y+ + + + D N I FALER IG +V Sbjct: 288 KVLDVGCGIGGGDFYM--AENYDVEVVGIDLSINMISFALERSIGLKCAV 335
>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC| 2.1.1.103) Length = 490 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +3 Query: 399 QVLDVGCGVASFSAYLLP-LDIHTMSFAPKDGHENQIQFALERGIGAMISV 548 +VLDVGCG+ Y+ D+ + D N I FALE IG SV Sbjct: 284 KVLDVGCGIGGGDFYMAENFDVDVVGI---DLSVNMISFALEHAIGLKCSV 331
>HEX8_ADE03 (P11324) Hexon-associated protein precursor (Protein VIII) (pVIII)| (Fragment) Length = 135 Score = 31.6 bits (70), Expect = 1.7 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Frame = +3 Query: 297 GGGTHFKHGATEYIERL---------GNMTTNSTGDLRSAGVVQVLDVGCGVASFSAYLL 449 GG +H + I+RL + + +S+ LR GV Q+ GCG +SF+ Sbjct: 18 GGSALCRHRPQQSIKRLVIRGRGIQLNDESVSSSLGLRPDGVFQI--AGCGRSSFTPRQA 75 Query: 450 PLDIHTMSFAPKDGHENQIQFALE 521 L + + S P+ G +QF E Sbjct: 76 VLTLESSSSQPRSGGIGTLQFVEE 99
>BAIP3_HUMAN (O94812) BAI1-associated protein 3 (BAP3)| Length = 1187 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = -1 Query: 567 VIALWPTQRSSHQSHALKQTGFDSHGHLLARMT*YEYLGEEDKQRSWQHRIQHPKLEQLL 388 V+ L TQR + S ++GF SH LL+ + E+ EE SW+ + P L Sbjct: 383 VLKLITTQRDTAMSQR-GRSGFLSHLLLLSHLLRLEHSAEEPNSSSWRGELSTPAATILC 441 Query: 387 LNG 379 L+G Sbjct: 442 LHG 444
>FUS1_YEAST (P11710) Nuclear fusion protein FUS1| Length = 512 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = +3 Query: 138 FCLVPPPNDYKIPIRWPTSRDYVWRSNVNHSHLSEVKGGQNWVHENGKLWWFPGGGTHFK 317 F PPN I P+ D + V+ S + +K + W +E+ WF G T+FK Sbjct: 212 FLYTKPPNIVHIESSMPSYNDLPSQKTVS-SKKTALKTSEKWSYESPLSRWFLRGSTYFK 270
>ASB1_HUMAN (Q9Y576) Ankyrin repeat and SOCS box protein 1 (ASB-1)| Length = 335 Score = 30.0 bits (66), Expect = 4.9 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +3 Query: 15 PLEHNEYVPCHDAAYVSKLRELDRSRHENLEAKCPPREESLFC 143 PLEH E HDAAYV L+ L RS + + E+S++C Sbjct: 32 PLEHCEDTRLHDAAYVGDLQTL-RSLLQEESYRSRINEKSVWC 73
>APOA_MACMU (P14417) Apolipoprotein(a) (EC 3.4.21.-) (Apo(a)) (Lp(a)) (Fragment)| Length = 1420 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -2 Query: 275 ILMHPILSSFYLRKV*MVHITTPYIVPTCWPSYRYLVVVWWRHQTEQALLSW 120 + + PI + L K+ I T ++P C PS Y++ W TE + W Sbjct: 1267 LFLEPIGADIALLKLSRPAIITDKVIPACLPSPNYVITAW----TECYITGW 1314
>BAIP3_MOUSE (Q80TT2) BAI1-associated protein 3 (BAP3)| Length = 1134 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/63 (31%), Positives = 33/63 (52%) Frame = -1 Query: 567 VIALWPTQRSSHQSHALKQTGFDSHGHLLARMT*YEYLGEEDKQRSWQHRIQHPKLEQLL 388 V+ L TQR + + ++GF S+ LL+R+ +E+ EE SW+ + P L Sbjct: 346 VLKLITTQRDTVMNQR-GRSGFLSYLLLLSRVLRFEHRVEEPNSSSWRGELSGPGTTVLC 404 Query: 387 LNG 379 L+G Sbjct: 405 LHG 407
>CIPA_CLOTM (Q06851) Cellulosomal scaffolding protein A precursor (Cellulosomal| glycoprotein S1/SL) (Cellulose-integrating protein A) (Cohesin) Length = 1853 Score = 29.3 bits (64), Expect = 8.3 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = -1 Query: 264 PNSVLLLPQKGVNGSHYYAIHSPDLLAIL*VSCSRLVEAPNRTSS 130 P ++ +PQKG+ + + P++L I+ + L+ PN T S Sbjct: 1567 PVNLYGVPQKGIASGDFVVSYDPNVLEIIEIEPGELIVDPNPTKS 1611 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,474,486 Number of Sequences: 219361 Number of extensions: 1951312 Number of successful extensions: 5080 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5075 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)