| Clone Name | bags16c08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013C01, full insert sequence Length = 2319 Score = 654 bits (330), Expect = 0.0 Identities = 510/570 (89%) Strand = Plus / Plus Query: 4 ttgatgtgtgtcctttggaacacaacgagtatgttccctgtcacgatgctgcctatgtga 63 ||||||| ||||||||| || ||||||||||| ||||||||||||| || ||||| | | Sbjct: 314 ttgatgtttgtcctttgaaatacaacgagtatattccctgtcacgacgcatcctatataa 373 Query: 64 gcaagttaagggagctggatagatctagacacgagaatcttgaagctaaatgccctccac 123 || | |||| | | |||||||||||||| || ||| |||||||| || ||||| |||| Sbjct: 374 gccaattaaagaaactggatagatctaggcatgaggatcttgaaagtatttgcccaccac 433 Query: 124 gagaggagagcttgttctgtttggtgcctccaccaaacgactacaagatacctataagat 183 |||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 434 aagagaaacgcttgttctgtttggtgcccccaccaaatgactacaagatacctataagat 493 Query: 184 ggccaacaagtcgggactatgtatggcgtagtaatgtgaaccattcacacctttctgagg 243 |||||||||||||||||||||| ||||||||||| || |||||||||| |||| |||||| Sbjct: 494 ggccaacaagtcgggactatgtttggcgtagtaacgtcaaccattcacgccttgctgagg 553 Query: 244 taaaaggaggacagaattgggtgcatgagaatggtaagctttggtggtttcctggaggtg 303 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 554 taaaaggaggacagaactgggtgcacgagaagggtaagctttggtggtttcctggaggtg 613 Query: 304 gcactcacttcaagcatggtgcaacagaatacatagagaggctaggaaatatgacaacca 363 | |||||||||| |||||||||| |||| || |||||||||||||| ||||||||||| | Sbjct: 614 gtactcacttcaggcatggtgcatcagagtatatagagaggctagggaatatgacaacaa 673 Query: 364 atagtactggtgatctccgttcagcaggagttgttcaagttttggatgttggatgcggtg 423 | ||||||||||||||||| || |||||||| || |||||||||||||||||||| |||| Sbjct: 674 acagtactggtgatctccgctcggcaggagtggtccaagttttggatgttggatgtggtg 733 Query: 424 ttgccagcttctctgcttatcttcttcccctagatattcatactatgtcattcgcgccaa 483 |||| ||||| |||||||| |||||||||||||| ||||||||||||||||| || |||| Sbjct: 734 ttgcgagcttttctgcttaccttcttcccctagacattcatactatgtcatttgctccaa 793 Query: 484 aagatggccatgagaatcaaatccagtttgctttagagcgtgggattggtgcgatgatct 543 |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 794 aagatggccatgagaatcaaatccagtttgctctagaacgtgggattggtgcaatgatct 853 Query: 544 ctgtgttggccacaaagcaattaccgtatc 573 ||||||||||||| ||||||||||| |||| Sbjct: 854 ctgtgttggccaccaagcaattaccttatc 883
>dbj|AK102118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084M04, full insert sequence Length = 1321 Score = 638 bits (322), Expect = e-180 Identities = 509/570 (89%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 ttgatgtgtgtcctttggaacacaacgagtatgttccctgtcacgatgctgcctatgtga 63 ||||||| ||||||||| || ||||||||||| ||||||||||||| || ||||| | | Sbjct: 318 ttgatgtttgtcctttgaaatacaacgagtatattccctgtcacgacgcatcctatataa 377 Query: 64 gcaagttaagggagctggatagatctagacacgagaatcttgaagctaaatgccctccac 123 || | |||| | | |||||||||||||| || ||| |||||||| || ||||| |||| Sbjct: 378 gccaattaaagaaactggatagatctaggcatgaggatcttgaaagtatttgcccaccac 437 Query: 124 gagaggagagcttgttctgtttggtgcctccaccaaacgactacaagatacctataagat 183 |||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 438 aagagaaacgcttgttctgtttggtgcccccaccaaatgactacaagatacctataagat 497 Query: 184 ggccaacaagtcgggactatgtatggcgtagtaatgtgaaccattcacacctttctgagg 243 |||||||||||||||||||||| | | ||||||| || |||||||||| |||| |||||| Sbjct: 498 ggccaacaagtcgggactatgttttg-gtagtaacgtcaaccattcacgccttgctgagg 556 Query: 244 taaaaggaggacagaattgggtgcatgagaatggtaagctttggtggtttcctggaggtg 303 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 557 taaaaggaggacagaactgggtgcacgagaagggtaagctttggtggtttcctggaggtg 616 Query: 304 gcactcacttcaagcatggtgcaacagaatacatagagaggctaggaaatatgacaacca 363 | ||||||||||||||||||||| |||| || |||||||||||||| ||||||||||| | Sbjct: 617 gtactcacttcaagcatggtgcatcagagtatatagagaggctagggaatatgacaacaa 676 Query: 364 atagtactggtgatctccgttcagcaggagttgttcaagttttggatgttggatgcggtg 423 | ||||||||||||||||| || |||||||| || |||||||||||||||||||| |||| Sbjct: 677 acagtactggtgatctccgctcggcaggagtggtccaagttttggatgttggatgtggtg 736 Query: 424 ttgccagcttctctgcttatcttcttcccctagatattcatactatgtcattcgcgccaa 483 |||| ||||| |||||||| |||||||||||||| ||||||||||||||||| || |||| Sbjct: 737 ttgcgagcttttctgcttaccttcttcccctagacattcatactatgtcatttgctccaa 796 Query: 484 aagatggccatgagaatcaaatccagtttgctttagagcgtgggattggtgcgatgatct 543 |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 797 aagatggccatgagaatcaaatccagtttgctctagaacgtgggattggtgcaatgatct 856 Query: 544 ctgtgttggccacaaagcaattaccgtatc 573 ||||||||||||| ||||||||||| |||| Sbjct: 857 ctgtgttggccaccaagcaattaccttatc 886
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 359 bits (181), Expect = 7e-96 Identities = 301/341 (88%) Strand = Plus / Minus Query: 4 ttgatgtgtgtcctttggaacacaacgagtatgttccctgtcacgatgctgcctatgtga 63 ||||||| ||||||||| || ||||||||||| ||||||||||||| || ||||| | | Sbjct: 54405 ttgatgtttgtcctttgaaatacaacgagtatattccctgtcacgacgcatcctatataa 54346 Query: 64 gcaagttaagggagctggatagatctagacacgagaatcttgaagctaaatgccctccac 123 || | |||| | | |||||||||||||| || ||| |||||||| || ||||| |||| Sbjct: 54345 gccaattaaagaaactggatagatctaggcatgaggatcttgaaagtatttgcccaccac 54286 Query: 124 gagaggagagcttgttctgtttggtgcctccaccaaacgactacaagatacctataagat 183 |||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 54285 aagagaaacgcttgttctgtttggtgcccccaccaaatgactacaagatacctataagat 54226 Query: 184 ggccaacaagtcgggactatgtatggcgtagtaatgtgaaccattcacacctttctgagg 243 |||||||||||||||||||||| ||||||||||| || |||||||||| |||| |||||| Sbjct: 54225 ggccaacaagtcgggactatgtttggcgtagtaacgtcaaccattcacgccttgctgagg 54166 Query: 244 taaaaggaggacagaattgggtgcatgagaatggtaagctttggtggtttcctggaggtg 303 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 54165 taaaaggaggacagaactgggtgcacgagaagggtaagctttggtggtttcctggaggtg 54106 Query: 304 gcactcacttcaagcatggtgcaacagaatacatagagagg 344 | ||||||||||||||||||||| |||| || ||||||||| Sbjct: 54105 gtactcacttcaagcatggtgcatcagagtatatagagagg 54065 Score = 309 bits (156), Expect = 5e-81 Identities = 213/232 (91%) Strand = Plus / Minus Query: 342 aggctaggaaatatgacaaccaatagtactggtgatctccgttcagcaggagttgttcaa 401 |||||||| ||||||||||| || ||||||||||||||||| || |||||||| || ||| Sbjct: 53724 aggctagggaatatgacaacaaacagtactggtgatctccgctcggcaggagtggtccaa 53665 Query: 402 gttttggatgttggatgcggtgttgccagcttctctgcttatcttcttcccctagatatt 461 ||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 53664 gttttggatgttggatgtggtgttgcgagcttttctgcttaccttcttcccctagacatt 53605 Query: 462 catactatgtcattcgcgccaaaagatggccatgagaatcaaatccagtttgctttagag 521 |||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 53604 catactatgtcatttgctccaaaagatggccatgagaatcaaatccagtttgctctagaa 53545 Query: 522 cgtgggattggtgcgatgatctctgtgttggccacaaagcaattaccgtatc 573 |||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 53544 cgtgggattggtgcaatgatctctgtgttggccaccaagcaattaccttatc 53493
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 359 bits (181), Expect = 7e-96 Identities = 301/341 (88%) Strand = Plus / Minus Query: 4 ttgatgtgtgtcctttggaacacaacgagtatgttccctgtcacgatgctgcctatgtga 63 ||||||| ||||||||| || ||||||||||| ||||||||||||| || ||||| | | Sbjct: 18173223 ttgatgtttgtcctttgaaatacaacgagtatattccctgtcacgacgcatcctatataa 18173164 Query: 64 gcaagttaagggagctggatagatctagacacgagaatcttgaagctaaatgccctccac 123 || | |||| | | |||||||||||||| || ||| |||||||| || ||||| |||| Sbjct: 18173163 gccaattaaagaaactggatagatctaggcatgaggatcttgaaagtatttgcccaccac 18173104 Query: 124 gagaggagagcttgttctgtttggtgcctccaccaaacgactacaagatacctataagat 183 |||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 18173103 aagagaaacgcttgttctgtttggtgcccccaccaaatgactacaagatacctataagat 18173044 Query: 184 ggccaacaagtcgggactatgtatggcgtagtaatgtgaaccattcacacctttctgagg 243 |||||||||||||||||||||| ||||||||||| || |||||||||| |||| |||||| Sbjct: 18173043 ggccaacaagtcgggactatgtttggcgtagtaacgtcaaccattcacgccttgctgagg 18172984 Query: 244 taaaaggaggacagaattgggtgcatgagaatggtaagctttggtggtttcctggaggtg 303 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 18172983 taaaaggaggacagaactgggtgcacgagaagggtaagctttggtggtttcctggaggtg 18172924 Query: 304 gcactcacttcaagcatggtgcaacagaatacatagagagg 344 | ||||||||||||||||||||| |||| || ||||||||| Sbjct: 18172923 gtactcacttcaagcatggtgcatcagagtatatagagagg 18172883 Score = 309 bits (156), Expect = 5e-81 Identities = 213/232 (91%) Strand = Plus / Minus Query: 342 aggctaggaaatatgacaaccaatagtactggtgatctccgttcagcaggagttgttcaa 401 |||||||| ||||||||||| || ||||||||||||||||| || |||||||| || ||| Sbjct: 18172542 aggctagggaatatgacaacaaacagtactggtgatctccgctcggcaggagtggtccaa 18172483 Query: 402 gttttggatgttggatgcggtgttgccagcttctctgcttatcttcttcccctagatatt 461 ||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 18172482 gttttggatgttggatgtggtgttgcgagcttttctgcttaccttcttcccctagacatt 18172423 Query: 462 catactatgtcattcgcgccaaaagatggccatgagaatcaaatccagtttgctttagag 521 |||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 18172422 catactatgtcatttgctccaaaagatggccatgagaatcaaatccagtttgctctagaa 18172363 Query: 522 cgtgggattggtgcgatgatctctgtgttggccacaaagcaattaccgtatc 573 |||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 18172362 cgtgggattggtgcaatgatctctgtgttggccaccaagcaattaccttatc 18172311 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 406 tggatgttggatgcggtgttgccagctt 433 ||||||||||||| |||||||||||||| Sbjct: 23048173 tggatgttggatgtggtgttgccagctt 23048146
>ref|NM_111855.2| Arabidopsis thaliana unknown protein AT3G10200 mRNA, complete cds Length = 1951 Score = 147 bits (74), Expect = 5e-32 Identities = 317/398 (79%) Strand = Plus / Plus Query: 144 ttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtcgggactat 203 ||||| ||||| ||||| || || ||||||||||| ||||||||||| ||| | |||||| Sbjct: 368 ttggtacctccgccaaatgattataagatacctattagatggccaaccagtagagactat 427 Query: 204 gtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggacagaattgg 263 |||||| | ||||||||||||||| |||| ||| || | || ||||| || || |||||| Sbjct: 428 gtatggagaagtaatgtgaaccatacacatcttgctcaagttaaaggtggccaaaattgg 487 Query: 264 gtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttcaagcatggt 323 || |||||| | ||| || |||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 488 gtccatgagcaaggtcagttttggtggttccctggtggtggtactcattttaagcatgga 547 Query: 324 gcaacagaatacatagagaggctaggaaatatgacaaccaatagtactggtgatctccgt 383 || |||||||||| ||||| | || ||||||| || ||| || ||||| | ||| Sbjct: 548 gctgcagaatacatccagaggttggggaatatgatgactaatgaaacaggtgacttgcgt 607 Query: 384 tcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttctctgcttat 443 ||||| || || || |||||| | |||||||| || || ||||| ||||| | |||||| Sbjct: 608 tcagctggggtggtacaagttcttgatgttggctgtggagttgcgagctttgcggcttat 667 Query: 444 cttcttcccctagatattcatactatgtcattcgcgccaaaagatggccatgagaatcaa 503 ||||||||| ||| ||| || || || ||||| || || |||||||| ||||| || || Sbjct: 668 cttcttcccttaggtatacagacaatttcatttgctcccaaagatggtcatgaaaaccag 727 Query: 504 atccagtttgctttagagcgtgggattggtgcgatgat 541 || |||||||| || ||| | || |||||||| ||||| Sbjct: 728 attcagtttgcattggagagaggcattggtgcaatgat 765
>gb|BT005741.1| Arabidopsis thaliana clone RAFL15-40-C20 (R50008) unknown protein (At3g10200) mRNA, complete cds Length = 1970 Score = 147 bits (74), Expect = 5e-32 Identities = 317/398 (79%) Strand = Plus / Plus Query: 144 ttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtcgggactat 203 ||||| ||||| ||||| || || ||||||||||| ||||||||||| ||| | |||||| Sbjct: 368 ttggtacctccgccaaatgattataagatacctattagatggccaaccagtagagactat 427 Query: 204 gtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggacagaattgg 263 |||||| | ||||||||||||||| |||| ||| || | || ||||| || || |||||| Sbjct: 428 gtatggagaagtaatgtgaaccatacacatcttgctcaagttaaaggtggccaaaattgg 487 Query: 264 gtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttcaagcatggt 323 || |||||| | ||| || |||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 488 gtccatgagcaaggtcagttttggtggttccctggtggtggtactcattttaagcatgga 547 Query: 324 gcaacagaatacatagagaggctaggaaatatgacaaccaatagtactggtgatctccgt 383 || |||||||||| ||||| | || ||||||| || ||| || ||||| | ||| Sbjct: 548 gctgcagaatacatccagaggttggggaatatgatgactaatgaaacaggtgacttgcgt 607 Query: 384 tcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttctctgcttat 443 ||||| || || || |||||| | |||||||| || || ||||| ||||| | |||||| Sbjct: 608 tcagctggggtggtacaagttcttgatgttggctgtggagttgcgagctttgcggcttat 667 Query: 444 cttcttcccctagatattcatactatgtcattcgcgccaaaagatggccatgagaatcaa 503 ||||||||| ||| ||| || || || ||||| || || |||||||| ||||| || || Sbjct: 668 cttcttcccttaggtatacagacaatttcatttgctcccaaagatggtcatgaaaaccag 727 Query: 504 atccagtttgctttagagcgtgggattggtgcgatgat 541 || |||||||| || ||| | || |||||||| ||||| Sbjct: 728 attcagtttgcattggagagaggcattggtgcaatgat 765
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence, complete sequence Length = 87937 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Minus Query: 144 ttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtcgggactat 203 ||||| ||||| ||||| || || ||||||||||| ||||||||||| ||| | |||||| Sbjct: 72595 ttggtacctccgccaaatgattataagatacctattagatggccaaccagtagagactat 72536 Query: 204 gtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggacagaattgg 263 |||||| | ||||||||||||||| |||| ||| || | || ||||| || || |||||| Sbjct: 72535 gtatggagaagtaatgtgaaccatacacatcttgctcaagttaaaggtggccaaaattgg 72476 Query: 264 gtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttcaagcatggt 323 || |||||| | ||| || |||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 72475 gtccatgagcaaggtcagttttggtggttccctggtggtggtactcattttaagcatgga 72416 Query: 324 gcaacagaatacat 337 || |||||||||| Sbjct: 72415 gctgcagaatacat 72402 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 381 cgttcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttctctgct 440 |||||||| || || || |||||| | |||||||| || || ||||| ||||| | ||| Sbjct: 72287 cgttcagctggggtggtacaagttcttgatgttggctgtggagttgcgagctttgcggct 72228 Query: 441 tatcttcttcccctagatattcatactatgtcattcgcgccaaaagatggccatgagaat 500 |||||||||||| ||| ||| || || || ||||| || || |||||||| ||||| || Sbjct: 72227 tatcttcttcccttaggtatacagacaatttcatttgctcccaaagatggtcatgaaaac 72168 Query: 501 caaatccagtttgctttagagcgtgggattggtgcgatgat 541 || || |||||||| || ||| | || |||||||| ||||| Sbjct: 72167 cagattcagtttgcattggagagaggcattggtgcaatgat 72127
>ref|NM_120488.2| Arabidopsis thaliana unknown protein AT5G04060 mRNA, complete cds Length = 2075 Score = 101 bits (51), Expect = 2e-18 Identities = 297/379 (78%) Strand = Plus / Plus Query: 136 tgttctgtttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtc 195 |||| |||||||| ||||| || || || || |||||||| ||| | ||||| || || Sbjct: 536 tgttttgtttggttcctccgcctaaagattataagataccaatacgctggccgactagca 595 Query: 196 gggactatgtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggac 255 | || ||||||||| | || |||||||| ||| | || ||| |||| || ||||| || | Sbjct: 596 gagattatgtatggagaagcaatgtgaatcatacgcatcttgctgaagtgaaaggcggcc 655 Query: 256 agaattgggtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttca 315 | |||||||||||||| | ||| || | |||||||| ||||| ||||| ||||| |||| Sbjct: 656 aaaattgggtgcatgaacaaggtcagttatggtggttccctggtggtggtactcatttca 715 Query: 316 agcatggtgcaacagaatacatagagaggctaggaaatatgacaaccaatagtactggtg 375 | ||||| || | |||||||| ||||| ||||||| |||||||| ||| || |||| Sbjct: 716 aacatggagctccggaatacatccagaggttaggaaacatgacaactaatgaaacaggtg 775 Query: 376 atctccgttcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttct 435 | || | |||||| || |||| |||||| | ||||||||||| || ||||| ||||| Sbjct: 776 accttctttcagctggggttgaacaagttcttgatgttggatgtggagttgctagctttg 835 Query: 436 ctgcttatcttcttcccctagatattcatactatgtcattcgcgccaaaagatggccatg 495 | |||||||||||||| ||| ||| | || ||||| || || || |||||||| |||| Sbjct: 836 cagcttatcttcttcctttaggtataaagacaatgtcttttgcccctaaagatggtcatg 895 Query: 496 agaatcaaatccagtttgc 514 | || |||||||||||||| Sbjct: 896 aaaaccaaatccagtttgc 914
>gb|AY072008.1| Arabidopsis thaliana AT5g04060/F8F6_270 mRNA, complete cds Length = 2075 Score = 101 bits (51), Expect = 2e-18 Identities = 297/379 (78%) Strand = Plus / Plus Query: 136 tgttctgtttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtc 195 |||| |||||||| ||||| || || || || |||||||| ||| | ||||| || || Sbjct: 536 tgttttgtttggttcctccgcctaaagattataagataccaatacgctggccgactagca 595 Query: 196 gggactatgtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggac 255 | || ||||||||| | || |||||||| ||| | || ||| |||| || ||||| || | Sbjct: 596 gagattatgtatggagaagcaatgtgaatcatacgcatcttgctgaagtgaaaggcggcc 655 Query: 256 agaattgggtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttca 315 | |||||||||||||| | ||| || | |||||||| ||||| ||||| ||||| |||| Sbjct: 656 aaaattgggtgcatgaacaaggtcagttatggtggttccctggtggtggtactcatttca 715 Query: 316 agcatggtgcaacagaatacatagagaggctaggaaatatgacaaccaatagtactggtg 375 | ||||| || | |||||||| ||||| ||||||| |||||||| ||| || |||| Sbjct: 716 aacatggagctccggaatacatccagaggttaggaaacatgacaactaatgaaacaggtg 775 Query: 376 atctccgttcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttct 435 | || | |||||| || |||| |||||| | ||||||||||| || ||||| ||||| Sbjct: 776 accttctttcagctggggttgaacaagttcttgatgttggatgtggagttgctagctttg 835 Query: 436 ctgcttatcttcttcccctagatattcatactatgtcattcgcgccaaaagatggccatg 495 | |||||||||||||| ||| ||| | || ||||| || || || |||||||| |||| Sbjct: 836 cagcttatcttcttcctttaggtataaagacaatgtcttttgcccctaaagatggtcatg 895 Query: 496 agaatcaaatccagtttgc 514 | || |||||||||||||| Sbjct: 896 aaaaccaaatccagtttgc 914
>emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project) Length = 97451 Score = 58.0 bits (29), Expect = 3e-05 Identities = 134/169 (79%) Strand = Plus / Plus Query: 346 taggaaatatgacaaccaatagtactggtgatctccgttcagcaggagttgttcaagttt 405 ||||||| |||||||| ||| || ||||| || | |||||| || |||| |||||| Sbjct: 3782 taggaaacatgacaactaatgaaacaggtgaccttctttcagctggggttgaacaagttc 3841 Query: 406 tggatgttggatgcggtgttgccagcttctctgcttatcttcttcccctagatattcata 465 | ||||||||||| || ||||| ||||| | |||||||||||||| ||| ||| | | Sbjct: 3842 ttgatgttggatgtggagttgctagctttgcagcttatcttcttcctttaggtataaaga 3901 Query: 466 ctatgtcattcgcgccaaaagatggccatgagaatcaaatccagtttgc 514 | ||||| || || || |||||||| ||||| || |||||||||||||| Sbjct: 3902 caatgtcttttgcccctaaagatggtcatgaaaaccaaatccagtttgc 3950 Score = 54.0 bits (27), Expect = 5e-04 Identities = 147/187 (78%) Strand = Plus / Plus Query: 136 tgttctgtttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtc 195 |||| |||||||| ||||| || || || || |||||||| ||| | ||||| || || Sbjct: 3449 tgttttgtttggttcctccgcctaaagattataagataccaatacgctggccgactagca 3508 Query: 196 gggactatgtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggac 255 | || ||||||||| | || |||||||| ||| | || ||| |||| || ||||| || | Sbjct: 3509 gagattatgtatggagaagcaatgtgaatcatacgcatcttgctgaagtgaaaggcggcc 3568 Query: 256 agaattgggtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttca 315 | |||||||||||||| | ||| || | |||||||| ||||| ||||| ||||| |||| Sbjct: 3569 aaaattgggtgcatgaacaaggtcagttatggtggttccctggtggtggtactcatttca 3628 Query: 316 agcatgg 322 | ||||| Sbjct: 3629 aacatgg 3635
>emb|AL162873.1|ATF8F6 Arabidopsis thaliana DNA chromosome 5, BAC clone F8F6 (ESSA project) Length = 96936 Score = 58.0 bits (29), Expect = 3e-05 Identities = 134/169 (79%) Strand = Plus / Plus Query: 346 taggaaatatgacaaccaatagtactggtgatctccgttcagcaggagttgttcaagttt 405 ||||||| |||||||| ||| || ||||| || | |||||| || |||| |||||| Sbjct: 89168 taggaaacatgacaactaatgaaacaggtgaccttctttcagctggggttgaacaagttc 89227 Query: 406 tggatgttggatgcggtgttgccagcttctctgcttatcttcttcccctagatattcata 465 | ||||||||||| || ||||| ||||| | |||||||||||||| ||| ||| | | Sbjct: 89228 ttgatgttggatgtggagttgctagctttgcagcttatcttcttcctttaggtataaaga 89287 Query: 466 ctatgtcattcgcgccaaaagatggccatgagaatcaaatccagtttgc 514 | ||||| || || || |||||||| ||||| || |||||||||||||| Sbjct: 89288 caatgtcttttgcccctaaagatggtcatgaaaaccaaatccagtttgc 89336 Score = 54.0 bits (27), Expect = 5e-04 Identities = 147/187 (78%) Strand = Plus / Plus Query: 136 tgttctgtttggtgcctccaccaaacgactacaagatacctataagatggccaacaagtc 195 |||| |||||||| ||||| || || || || |||||||| ||| | ||||| || || Sbjct: 88835 tgttttgtttggttcctccgcctaaagattataagataccaatacgctggccgactagca 88894 Query: 196 gggactatgtatggcgtagtaatgtgaaccattcacacctttctgaggtaaaaggaggac 255 | || ||||||||| | || |||||||| ||| | || ||| |||| || ||||| || | Sbjct: 88895 gagattatgtatggagaagcaatgtgaatcatacgcatcttgctgaagtgaaaggcggcc 88954 Query: 256 agaattgggtgcatgagaatggtaagctttggtggtttcctggaggtggcactcacttca 315 | |||||||||||||| | ||| || | |||||||| ||||| ||||| ||||| |||| Sbjct: 88955 aaaattgggtgcatgaacaaggtcagttatggtggttccctggtggtggtactcatttca 89014 Query: 316 agcatgg 322 | ||||| Sbjct: 89015 aacatgg 89021
>ref|NM_190423.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1914 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||||||||| Sbjct: 848 tggatgttggatgcggtgttgccagctt 875
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||||||||| Sbjct: 35431860 tggatgttggatgcggtgttgccagctt 35431887 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 291 tttcctggaggtggcactcacttcaagcatggtgca 326 ||||| || ||||||||||| |||||| |||||||| Sbjct: 38383052 tttcccgggggtggcactcagttcaagaatggtgca 38383017
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||||||||| Sbjct: 55809 tggatgttggatgcggtgttgccagctt 55836
>dbj|AK069906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H23, full insert sequence Length = 2449 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||||||||| Sbjct: 973 tggatgttggatgcggtgttgccagctt 1000
>gb|AY179503.1| Clavispora lusitaniae S-adenosylmethionine:D24-methyltransferase (ERG6) gene, complete cds Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 401 agttttggatgttggatgcggtgttg 426 |||||||||||||||||||||||||| Sbjct: 375 agttttggatgttggatgcggtgttg 400
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 405 ttggatgttggatgcggtgttgccagctt 433 ||||||||||||||||| ||||||||||| Sbjct: 110801 ttggatgttggatgcggcgttgccagctt 110829
>ref|NM_125799.2| Arabidopsis thaliana unknown protein AT5G64030 mRNA, complete cds Length = 3031 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||| ||||| Sbjct: 1603 tggatgttggatgcggtgttgcaagctt 1630
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 406 tggatgttggatgcggtgttgccagctt 433 ||||||||||||| |||||||||||||| Sbjct: 110653 tggatgttggatgtggtgttgccagctt 110626
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 406 tggatgttggatgcggtgttgccagctt 433 ||||||||||||| |||||||||||||| Sbjct: 152186 tggatgttggatgtggtgttgccagctt 152159
>gb|AY125524.1| Arabidopsis thaliana AT5g64030/MBM17_13 mRNA, complete cds Length = 2856 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||| ||||| Sbjct: 1441 tggatgttggatgcggtgttgcaagctt 1468
>gb|BT003013.1| Arabidopsis thaliana At5g64030/MBM17_13 gene, complete cds Length = 2490 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||| ||||| Sbjct: 1280 tggatgttggatgcggtgttgcaagctt 1307
>dbj|AB019227.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBM17 Length = 52717 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 |||||||||||||||||||||| ||||| Sbjct: 52663 tggatgttggatgcggtgttgcaagctt 52690
>dbj|AK069412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018G09, full insert sequence Length = 2602 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 ||||||||||||| |||||||||||||| Sbjct: 1123 tggatgttggatgtggtgttgccagctt 1150
>dbj|AK066628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068N15, full insert sequence Length = 2930 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 tggatgttggatgcggtgttgccagctt 433 ||||||||||||| |||||||||||||| Sbjct: 1452 tggatgttggatgtggtgttgccagctt 1479
>ref|NM_106375.1| Arabidopsis thaliana unknown protein AT1G77260 mRNA, complete cds Length = 2415 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 480 ccaaaagatggccatgagaatcaaatccagtttgctttagagcgtgg 526 |||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 1144 ccaaaagatgttcatgagaatcagatacagtttgcattggagcgtgg 1190
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 381 cgttcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttctctgct 440 |||||||| || |||| |||||| | ||||||||||| || ||||| ||||| | ||| Sbjct: 39075 cgttcagctggggttgaacaagttcttgatgttggatgtggagttgctagctttgcagct 39134 Query: 441 tatcttcttcc 451 ||||||||||| Sbjct: 39135 tatcttcttcc 39145
>gb|AY093963.1| Arabidopsis thaliana At1g77260/T14N5_19 mRNA, complete cds Length = 1968 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 480 ccaaaagatggccatgagaatcaaatccagtttgctttagagcgtgg 526 |||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 886 ccaaaagatgttcatgagaatcagatacagtttgcattggagcgtgg 932
>gb|AF367259.1|AF367259 Arabidopsis thaliana At1g77260/T14N5_19 mRNA, complete cds Length = 2418 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 480 ccaaaagatggccatgagaatcaaatccagtttgctttagagcgtgg 526 |||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 1146 ccaaaagatgttcatgagaatcagatacagtttgcattggagcgtgg 1192
>emb|BX814459.1|CNS0AAU0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2201 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 480 ccaaaagatggccatgagaatcaaatccagtttgctttagagcgtgg 526 |||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 1068 ccaaaagatgttcatgagaatcagatacagtttgcattggagcgtgg 1114
>gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete sequence Length = 83822 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 480 ccaaaagatggccatgagaatcaaatccagtttgctttagagcgtgg 526 |||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 54160 ccaaaagatgttcatgagaatcagatacagtttgcattggagcgtgg 54114
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 381 cgttcagcaggagttgttcaagttttggatgttggatgcggtgttgccagcttctctgct 440 |||||||| || |||| |||||| | ||||||||||| || ||||| ||||| | ||| Sbjct: 10213 cgttcagctggggttgaacaagttcttgatgttggatgtggagttgctagctttgcagct 10272 Query: 441 tatcttcttcc 451 ||||||||||| Sbjct: 10273 tatcttcttcc 10283
>gb|AC104604.7| Drosophila melanogaster X BAC RP98-18K5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167902 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 257 gaattgggtgcatgagaatggtaagcttt 285 |||||||||| ||||||||||| |||||| Sbjct: 116784 gaattgggtgaatgagaatggttagcttt 116812
>gb|AY095016.1| Drosophila melanogaster GM01744 full insert cDNA Length = 2786 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gaattgggtgcatgagaatggtaagcttt 285 |||||||||| ||||||||||| |||||| Sbjct: 1722 gaattgggtgaatgagaatggttagcttt 1694
>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119388 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 aagttaagggagctggataga 86 ||||||||||||||||||||| Sbjct: 25919 aagttaagggagctggataga 25899
>gb|AY961552.1| Lysiphlebus testaceipes ribosomal protein S26 (RpS26) mRNA, complete cds Length = 348 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgtcctttggaacacaacgag 32 ||||||||||||||||||||| Sbjct: 100 tgtcctttggaacacaacgag 80
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gaattgggtgcatgagaatggtaagcttt 285 |||||||||| ||||||||||| |||||| Sbjct: 56188 gaattgggtgaatgagaatggttagcttt 56160
>ref|XM_474482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2163 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 gttttggatgttggatgcggtgttgccagctt 433 ||||| |||||||| ||||| ||||||||||| Sbjct: 826 gttttagatgttggttgcggagttgccagctt 857
>ref|XM_463541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 291 tttcctggaggtggcactcacttcaagcatggtgca 326 ||||| || ||||||||||| |||||| |||||||| Sbjct: 1117 tttcccgggggtggcactcagttcaagaatggtgca 1152
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ggattggtgcgatgatctct 545 |||||||||||||||||||| Sbjct: 901854 ggattggtgcgatgatctct 901835
>ref|XM_390917.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10741.1) partial mRNA Length = 993 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gttttggatgttggatgcgg 421 |||||||||||||||||||| Sbjct: 277 gttttggatgttggatgcgg 296
>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence Length = 279112 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gtgaaccattcacacctttc 238 |||||||||||||||||||| Sbjct: 206688 gtgaaccattcacacctttc 206707
>gb|AC110233.9| Mus musculus chromosome 6, clone RP23-68H1, complete sequence Length = 151295 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 agaatcttgaagctaaatgc 116 |||||||||||||||||||| Sbjct: 98124 agaatcttgaagctaaatgc 98143
>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence Length = 204891 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 agatattcatactatgtcat 474 |||||||||||||||||||| Sbjct: 10558 agatattcatactatgtcat 10539
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 gttttggatgttggatgcggtgttgccagctt 433 ||||| |||||||| ||||| ||||||||||| Sbjct: 96587 gttttagatgttggttgcggagttgccagctt 96618
>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence Length = 192509 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 agatattcatactatgtcat 474 |||||||||||||||||||| Sbjct: 20399 agatattcatactatgtcat 20418
>gb|AC104358.4| Homo sapiens chromosome 8, clone RP11-151L10, complete sequence Length = 174055 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgttcaagttttggatgtt 413 |||||||||||||||||||| Sbjct: 23506 ttgttcaagttttggatgtt 23487
>gb|AC037486.4| Homo sapiens chromosome 8, clone RP11-398G24, complete sequence Length = 189041 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgttcaagttttggatgtt 413 |||||||||||||||||||| Sbjct: 186546 ttgttcaagttttggatgtt 186527
>gb|AC154782.2| Mus musculus BAC clone RP24-464A14 from chromosome 16, complete sequence Length = 144048 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctttggtggtttcctggagg 301 |||||||||||||||||||| Sbjct: 128075 ctttggtggtttcctggagg 128094
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 gttttggatgttggatgcggtgttgccagctt 433 ||||| |||||||| ||||| ||||||||||| Sbjct: 35471784 gttttagatgttggttgcggagttgccagctt 35471815
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gaggtggcactcacttcaag 317 |||||||||||||||||||| Sbjct: 12772081 gaggtggcactcacttcaag 12772100
>gb|AC073955.5| Homo sapiens BAC clone RP11-152D8 from 2, complete sequence Length = 46508 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 aggaaatatgacaaccaata 366 |||||||||||||||||||| Sbjct: 32728 aggaaatatgacaaccaata 32709
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 291 tttcctggaggtggcactcacttcaagcatggtgca 326 ||||| || ||||||||||| |||||| |||||||| Sbjct: 143877 tttcccgggggtggcactcagttcaagaatggtgca 143842
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gaggtggcactcacttcaag 317 |||||||||||||||||||| Sbjct: 30205 gaggtggcactcacttcaag 30224
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atgttccctgtcacgatgct 53 |||||||||||||||||||| Sbjct: 37289 atgttccctgtcacgatgct 37308
>gb|AC074315.79| Mus musculus strain C57BL/6J clone rp23-445c23 map 15, complete sequence Length = 177864 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 atacatagagaggctaggaa 351 |||||||||||||||||||| Sbjct: 158929 atacatagagaggctaggaa 158910
>dbj|AK119636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F03, full insert sequence Length = 2826 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 291 tttcctggaggtggcactcacttcaagcatggtgca 326 ||||| || ||||||||||| |||||| |||||||| Sbjct: 1255 tttcccgggggtggcactcagttcaagaatggtgca 1290
>dbj|AK100713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115H24, full insert sequence Length = 2988 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 291 tttcctggaggtggcactcacttcaagcatggtgca 326 ||||| || ||||||||||| |||||| |||||||| Sbjct: 1421 tttcccgggggtggcactcagttcaagaatggtgca 1456
>dbj|AK070717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L06, full insert sequence Length = 2475 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 402 gttttggatgttggatgcggtgttgccagctt 433 ||||| |||||||| ||||| ||||||||||| Sbjct: 1036 gttttagatgttggttgcggagttgccagctt 1067
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 atagagaggctaggaaatatgaca 359 ||||||||||||||| |||||||| Sbjct: 2062167 atagagaggctaggatatatgaca 2062144
>dbj|AP000811.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-777F6, complete sequences Length = 176953 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgccagcttctctgcttatc 444 |||||||||||||||||||| Sbjct: 119588 tgccagcttctctgcttatc 119569
>dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1016F12, complete sequence Length = 200738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgttcaagttttggatgtt 413 |||||||||||||||||||| Sbjct: 12356 ttgttcaagttttggatgtt 12337
>gb|AC123677.6| Mus musculus chromosome 15, clone RP23-275M16, complete sequence Length = 149858 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 atacatagagaggctaggaa 351 |||||||||||||||||||| Sbjct: 83708 atacatagagaggctaggaa 83727
>emb|AL593847.36| Mouse DNA sequence from clone RP23-170A23 on chromosome 11, complete sequence Length = 222315 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 tgagaatcaaatccagtttg 513 |||||||||||||||||||| Sbjct: 209897 tgagaatcaaatccagtttg 209916
>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence Length = 107278 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tagagaggctaggaaatatg 356 |||||||||||||||||||| Sbjct: 41228 tagagaggctaggaaatatg 41247
>emb|AL133245.4|CNS01DUI BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 854M03 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 138041 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tggtggtttcctggaggtgg 304 |||||||||||||||||||| Sbjct: 109489 tggtggtttcctggaggtgg 109508 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,664,253 Number of Sequences: 3902068 Number of extensions: 4664253 Number of successful extensions: 80855 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80618 Number of HSP's gapped (non-prelim): 228 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)