ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY557340.2| Triticum aestivum root hair defective 3 GTP-bindi... 827 0.0
2ref|NM_193615.1| Oryza sativa (japonica cultivar-group), predic... 519 e-144
3dbj|AK101859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144
4dbj|AK070726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144
5dbj|AK101558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
6gb|AY105402.1| Zea mays PCO129431 mRNA sequence 202 7e-49
7ref|NM_105954.1| Arabidopsis thaliana nucleotide binding AT1G729... 113 5e-22
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
10ref|NM_112241.3| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE ... 62 2e-06
11ref|NM_202579.1| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE ... 62 2e-06
12ref|NM_123884.2| Arabidopsis thaliana ATP binding / GTP binding ... 62 2e-06
13gb|AY128801.1| Arabidopsis thaliana unknown protein (At3g13870) ... 62 2e-06
14gb|AY092988.1| Arabidopsis thaliana unknown protein (At3g13870) ... 62 2e-06
15dbj|AK070939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
16dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 52 0.002
17gb|U86081.1|ATU86081 Arabidopsis thaliana root hair defective 3 ... 52 0.002
18dbj|AB012240.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.025
19dbj|AK100485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
20dbj|AK065661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
21gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14... 46 0.10
22gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L... 46 0.10
23gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 46 0.10
24gb|CP000097.1| Synechococcus sp. CC9902, complete genome 44 0.40
25gb|AC006315.2| Homo sapiens PAC clone RP4-630F1 from 7, complete... 44 0.40
26gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N... 44 0.40
27gb|AC159227.3| Mus musculus BAC clone RP24-334D12 from chromosom... 42 1.6
28gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
29gb|AC160390.2| Mus musculus BAC clone RP24-465C5 from chromosome... 42 1.6
30gb|AC149803.7| Medicago truncatula clone mth2-70e16, complete se... 42 1.6
31emb|AL390071.9| Human DNA sequence from clone RP11-98D3 on chrom... 42 1.6
32emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
33emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
34emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 42 1.6
35emb|AL731774.11| Mouse DNA sequence from clone RP23-61E13 on chr... 42 1.6
36emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chr... 42 1.6
37emb|BX679667.8| Mouse DNA sequence from clone RP24-424A15 on chr... 42 1.6
38emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chr... 42 1.6
39emb|CR751562.5| Mouse DNA sequence from clone RP23-240H13 on chr... 42 1.6
40emb|CR387995.6| Mouse DNA sequence from clone RP23-18L17 on chro... 42 1.6
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42emb|BX890554.6| Mouse DNA sequence from clone RP23-291C10 on chr... 42 1.6
43emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chr... 42 1.6
44emb|AL672012.7| Mouse DNA sequence from clone RP23-277K12 on chr... 42 1.6
45emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chr... 42 1.6
46emb|BX927237.15| Zebrafish DNA sequence from clone DKEY-29J9 in ... 42 1.6
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
48emb|BX914222.9| Zebrafish DNA sequence from clone DKEYP-108A2 in... 40 6.2
49gb|AC144833.2| Homo sapiens chromosome 15, clone XXfos-82651E9, ... 40 6.2
50gb|AC124457.4| Mus musculus BAC clone RP24-134O20 from chromosom... 40 6.2
51gb|AC124914.3| Homo sapiens chromosome 3 clone RP11-146K16, comp... 40 6.2
52emb|AL672216.10| Zebrafish DNA sequence from clone BUSM1-44O19 i... 40 6.2
53emb|AJ307671.1|BAC221D7 Mus musculus BAC22107 partial stk33 gene 40 6.2
54emb|BX530409.7| Zebrafish DNA sequence from clone DKEY-69K9 in l... 40 6.2
55gb|AC098971.2| Homo sapiens chromosome 3 clone RP11-118N13, comp... 40 6.2
56gb|AC107457.2| Homo sapiens chromosome 15, clone RP11-321B18, co... 40 6.2
57gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 40 6.2
58gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, c... 40 6.2
59gb|AC135326.6| Homo sapiens chromosome 15, clone RP11-70G9, comp... 40 6.2
60gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio... 40 6.2
61emb|BX927188.11| Zebrafish DNA sequence from clone DKEY-264N13 i... 40 6.2 
>gb|AY557340.2| Triticum aestivum root hair defective 3 GTP-binding protein (wrsi2)
           mRNA, complete cds
          Length = 2800

 Score =  827 bits (417), Expect = 0.0
 Identities = 449/460 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcattatttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatat 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 452 tgcattatttgctttggctgtttcggatattgtgttgatcaatatgtggtgccatgatat 511

                                                                       
Query: 61  tgggagagaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgag 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tggcagagaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgag 571

                                                                       
Query: 121 attattcagtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagacacc 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 attatttagtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagacacc 631

                                                                       
Query: 181 tttggaaaatcttgaaccgattttaagagaagatattcagaagatatgggatggtgttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tttggaaaatcttgaaccgattttaagagaagatattcagaagatatgggatggtgttcc 691

                                                                       
Query: 241 taaaccccatgcccataaagatactccactcagtgaattttttaatgtacaagtggtggc 300
           |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 692 taaaccccatgcccataaagatactccactcagtgaatttttcaatgtgcaagtggtggc 751

                                                                       
Query: 301 ccttaacagttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgagaga 360
           ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 752 ccttaacagttatgaggaaaaggaagagttattcagagagcaggtttccaacttgagaga 811

                                                                       
Query: 361 taggtttcaacagtctattgctcctggcggacttgctggagatcggcgtggtgttgttcc 420
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 812 taggtttcaacagtctattgctcctggtggacttgctggagatcggcgtggtgttgttcc 871

                                                   
Query: 421 agcatcaggtttttcatttagctcacagcaattctggaag 460
           ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 872 agcatcaggtttttcatttagctcacagcaattttggaag 911
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>ref|NM_193615.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2421

 Score =  519 bits (262), Expect = e-144
 Identities = 405/453 (89%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||
Sbjct: 349 tttgctttggctgtttcagatattgtgttgatcaatatgtggtgtcatgacattggtaga 408

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 409 gaacaggctgcgaacaaacctcttttgaagactgttttccaggttatgatgagattgttc 468

                                                                       
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagacacctttggaa 187
           ||||| || ||||| ||| || | |||||||||||||| ||||||||||||||| |||||
Sbjct: 469 agtccacgtaaaacgacattgttgtttgttattcgtgataaatcaaagacacctctggaa 528

                                                                       
Query: 188 aatcttgaaccgattttaagagaagatattcagaagatatgggatggtgttcctaaaccc 247
           ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 529 aatcttgaaccgattctaagggaagatattcagaagatatgggatggtgtccctaaaccc 588

                                                                       
Query: 248 catgcccataaagatactccactcagtgaattttttaatgtacaagtggtggcccttaac 307
           |||||||| || || |||||||| ||||||||||| |||||  |||| ||||||||    
Sbjct: 589 catgcccacaaggaaactccactgagtgaatttttcaatgtcgaagttgtggccctatct 648

                                                                       
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgagagataggttt 367
           ||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||| 
Sbjct: 649 agttatgaggaaaaggaggagttattcaaagagcaggttgccagtttaagagataggttc 708

                                                                       
Query: 368 caacagtctattgctcctggcggacttgctggagatcggcgtggtgttgttccagcatca 427
           |||||||||||||||||||| |||||||||||||||||||| || ||||| || ||||| 
Sbjct: 709 caacagtctattgctcctggtggacttgctggagatcggcggggcgttgtccctgcatct 768

                                            
Query: 428 ggtttttcatttagctcacagcaattctggaag 460
           ||||| || || || ||||| ||||| ||||||
Sbjct: 769 ggtttctctttcagttcacaacaattttggaag 801
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>dbj|AK101859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069P18, full
           insert sequence
          Length = 2988

 Score =  519 bits (262), Expect = e-144
 Identities = 405/453 (89%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||
Sbjct: 474 tttgctttggctgtttcagatattgtgttgatcaatatgtggtgtcatgacattggtaga 533

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 534 gaacaggctgcgaacaaacctcttttgaagactgttttccaggttatgatgagattgttc 593

                                                                       
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagacacctttggaa 187
           ||||| || ||||| ||| || | |||||||||||||| ||||||||||||||| |||||
Sbjct: 594 agtccacgtaaaacgacattgttgtttgttattcgtgataaatcaaagacacctctggaa 653

                                                                       
Query: 188 aatcttgaaccgattttaagagaagatattcagaagatatgggatggtgttcctaaaccc 247
           ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 654 aatcttgaaccgattctaagggaagatattcagaagatatgggatggtgtccctaaaccc 713

                                                                       
Query: 248 catgcccataaagatactccactcagtgaattttttaatgtacaagtggtggcccttaac 307
           |||||||| || || |||||||| ||||||||||| |||||  |||| ||||||||    
Sbjct: 714 catgcccacaaggaaactccactgagtgaatttttcaatgtcgaagttgtggccctatct 773

                                                                       
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgagagataggttt 367
           ||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||| 
Sbjct: 774 agttatgaggaaaaggaggagttattcaaagagcaggttgccagtttaagagataggttc 833

                                                                       
Query: 368 caacagtctattgctcctggcggacttgctggagatcggcgtggtgttgttccagcatca 427
           |||||||||||||||||||| |||||||||||||||||||| || ||||| || ||||| 
Sbjct: 834 caacagtctattgctcctggtggacttgctggagatcggcggggcgttgtccctgcatct 893

                                            
Query: 428 ggtttttcatttagctcacagcaattctggaag 460
           ||||| || || || ||||| ||||| ||||||
Sbjct: 894 ggtttctctttcagttcacaacaattttggaag 926
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>dbj|AK070726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059E17, full
           insert sequence
          Length = 2994

 Score =  519 bits (262), Expect = e-144
 Identities = 405/453 (89%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||
Sbjct: 517 tttgctttggctgtttcagatattgtgttgatcaatatgtggtgtcatgacattggtaga 576

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 577 gaacaggctgcgaacaaacctcttttgaagactgttttccaggttatgatgagattgttc 636

                                                                       
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagacacctttggaa 187
           ||||| || ||||| ||| || | |||||||||||||| ||||||||||||||| |||||
Sbjct: 637 agtccacgtaaaacgacattgttgtttgttattcgtgataaatcaaagacacctctggaa 696

                                                                       
Query: 188 aatcttgaaccgattttaagagaagatattcagaagatatgggatggtgttcctaaaccc 247
           ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 697 aatcttgaaccgattctaagggaagatattcagaagatatgggatggtgtccctaaaccc 756

                                                                       
Query: 248 catgcccataaagatactccactcagtgaattttttaatgtacaagtggtggcccttaac 307
           |||||||| || || |||||||| ||||||||||| |||||  |||| ||||||||    
Sbjct: 757 catgcccacaaggaaactccactgagtgaatttttcaatgtcgaagttgtggccctatct 816

                                                                       
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgagagataggttt 367
           ||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||| 
Sbjct: 817 agttatgaggaaaaggaggagttattcaaagagcaggttgccagtttaagagataggttc 876

                                                                       
Query: 368 caacagtctattgctcctggcggacttgctggagatcggcgtggtgttgttccagcatca 427
           |||||||||||||||||||| |||||||||||||||||||| || ||||| || ||||| 
Sbjct: 877 caacagtctattgctcctggtggacttgctggagatcggcggggcgttgtccctgcatct 936

                                            
Query: 428 ggtttttcatttagctcacagcaattctggaag 460
           ||||| || || || ||||| ||||| ||||||
Sbjct: 937 ggtttctctttcagttcacaacaattttggaag 969
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>dbj|AK101558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050C19, full
           insert sequence
          Length = 2213

 Score =  210 bits (106), Expect = 3e-51
 Identities = 199/230 (86%)
 Strand = Plus / Plus

                                                                       
Query: 231 atggtgttcctaaaccccatgcccataaagatactccactcagtgaattttttaatgtac 290
           ||||||| ||||||||||||||||| || || |||||||| ||||||||||| |||||  
Sbjct: 1   atggtgtccctaaaccccatgcccacaaggaaactccactgagtgaatttttcaatgtcg 60

                                                                       
Query: 291 aagtggtggcccttaacagttatgaggaaaaggaagagttatttaaagagcaggtttcca 350
           |||| ||||||||    ||||||||||||||||| |||||||| |||||||||||| |||
Sbjct: 61  aagttgtggccctatctagttatgaggaaaaggaggagttattcaaagagcaggttgcca 120

                                                                       
Query: 351 atttgagagataggtttcaacagtctattgctcctggcggacttgctggagatcggcgtg 410
            ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 121 gtttaagagataggttccaacagtctattgctcctggtggacttgctggagatcggcggg 180

                                                             
Query: 411 gtgttgttccagcatcaggtttttcatttagctcacagcaattctggaag 460
           | ||||| || ||||| ||||| || || || ||||| ||||| ||||||
Sbjct: 181 gcgttgtccctgcatctggtttctctttcagttcacaacaattttggaag 230
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>gb|AY105402.1| Zea mays PCO129431 mRNA sequence
          Length = 733

 Score =  202 bits (102), Expect = 7e-49
 Identities = 207/237 (87%), Gaps = 4/237 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcattatttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatat 60
           |||||| ||||||||||| ||||| || |||| |||||| ||||||||||||||||| ||
Sbjct: 490 tgcattgtttgctttggccgtttcagacattgtgttgattaatatgtggtgtcatgacat 549

                                                                       
Query: 61  tgggagagaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgag 120
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 550 tggtagagaacaggctgcaaacaagcctcttttgaagactgttttccaggtcatgatgaa 609

                                                                       
Query: 121 attattcagtcctcgcaaaacaacaatgctatttgttatt-cgtgac-aaatcaaagaca 178
            || ||||||||||||||||||||| || | ||||| ||| |||||| ||||||| ||||
Sbjct: 610 gttgttcagtcctcgcaaaacaacattgttgtttgtcattccgtgacaaaatcaaggaca 669

                                                                    
Query: 179 cctttggaaaatcttg-aaccgatttt-aagagaagatattcagaagatatgggatg 233
            |  |   |||||||| |||| ||||| ||| ||||| |||||||||||||||||||
Sbjct: 670 accctaagaaatcttgaaaccaattttaaagggaagacattcagaagatatgggatg 726
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>ref|NM_105954.1| Arabidopsis thaliana nucleotide binding AT1G72960 mRNA, complete
           cds
          Length = 2367

 Score =  113 bits (57), Expect = 5e-22
 Identities = 234/293 (79%)
 Strand = Plus / Plus

                                                                       
Query: 35  ttgatcaatatgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttg 94
           |||||||| ||||||||||| || |||||  | ||||| ||||| || || ||||| |||
Sbjct: 370 ttgatcaacatgtggtgtcacgacattggccgtgaacaagctgctaataaacctctcttg 429

                                                                       
Query: 95  aagactgttttccaggtcatgatgagattattcagtcctcgcaaaacaacaatgctattt 154
           || ||||| || ||||| |||||| |||| || ||||| || |||||||||||||| |||
Sbjct: 430 aaaactgtctttcaggtgatgatgcgattgtttagtccacgtaaaacaacaatgctgttt 489

                                                                       
Query: 155 gttattcgtgacaaatcaaagacacctttggaaaatcttgaaccgattttaagagaagat 214
           || || || || ||| |   |||||| ||||||||| | || ||  | ||||||||||||
Sbjct: 490 gtaatacgagataaaacccggacaccgttggaaaatttagagcctgtcttaagagaagat 549

                                                                       
Query: 215 attcagaagatatgggatggtgttcctaaaccccatgcccataaagatactccactcagt 274
           ||||||||||||||||||  |||||| || ||  | || || || || ||||| || |||
Sbjct: 550 attcagaagatatgggattctgttccaaagcctgaagcacacaaggaaactcctctaagt 609

                                                                
Query: 275 gaattttttaatgtacaagtggtggcccttaacagttatgaggaaaaggaaga 327
           || ||||| |||||  |||| || || |||  |||||||||||| ||||||||
Sbjct: 610 gactttttcaatgttgaagttgttgctctttccagttatgaggagaaggaaga 662
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                            
Query: 46       gtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtttt 105
                |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 22119314 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 22119373

                        
Query: 106      ccaggtca 113
                ||||||||
Sbjct: 22119374 ccaggtca 22119381



 Score =  109 bits (55), Expect = 8e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                            
Query: 342      aggtttccaatttgagagataggtttcaacagtctattgctcctggcggacttgctggag 401
                ||||| ||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 22120088 aggttgccagtttaagagataggttccaacagtctattgctcctggtggacttgctggag 22120147

                                                                           
Query: 402      atcggcgtggtgttgttccagcatcaggtttttcatttagctcacagcaattctggaag 460
                ||||||| || ||||| || ||||| ||||| || || || ||||| ||||| ||||||
Sbjct: 22120148 atcggcggggcgttgtccctgcatctggtttctctttcagttcacaacaattttggaag 22120206



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 222      agatatgggatggtgttcctaaaccccatgcccataaagatactccactcagtgaatttt 281
                |||||||||||||||| ||||||||||||||||| || || |||||||| ||||||||||
Sbjct: 22119803 agatatgggatggtgtccctaaaccccatgcccacaaggaaactccactgagtgaatttt 22119862

                        
Query: 282      ttaatgta 289
                | ||||||
Sbjct: 22119863 tcaatgta 22119870



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 174      agacacctttggaaaatcttgaaccgattttaagagaagatattcagaagatatg 228
                |||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 22119671 agacacctctggaaaatcttgaaccgattctaagggaagatattcagaaggtatg 22119725



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 8        tttgctttggctgtttcggatattgngttgatcaatatgt 47
                ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 22119187 tttgctttggctgtttcagatattgtgttgatcaatatgt 22119226



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 108      aggtcatgatgagattattcagtcctcgcaaaacaacaatgctatttgttattcgtgaca 167
                |||| ||||||||||| |||||||| || ||||| ||| || | |||||||||||||| |
Sbjct: 22119479 aggttatgatgagattgttcagtccacgtaaaacgacattgttgtttgttattcgtgata 22119538

                        
Query: 168      aatcaaag 175
                ||||||||
Sbjct: 22119539 aatcaaag 22119546



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 308      agttatgaggaaaaggaagagttatttaaagagcaggtt 346
                ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 22119966 agttatgaggaaaaggaggagttattcaaagagcaggtt 22120004
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>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1112D09
          Length = 125920

 Score =  111 bits (56), Expect = 2e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                         
Query: 46    gtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtttt 105
             |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14800 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 14859

                     
Query: 106   ccaggtca 113
             ||||||||
Sbjct: 14860 ccaggtca 14867



 Score =  109 bits (55), Expect = 8e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                         
Query: 342   aggtttccaatttgagagataggtttcaacagtctattgctcctggcggacttgctggag 401
             ||||| ||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 15574 aggttgccagtttaagagataggttccaacagtctattgctcctggtggacttgctggag 15633

                                                                        
Query: 402   atcggcgtggtgttgttccagcatcaggtttttcatttagctcacagcaattctggaag 460
             ||||||| || ||||| || ||||| ||||| || || || ||||| ||||| ||||||
Sbjct: 15634 atcggcggggcgttgtccctgcatctggtttctctttcagttcacaacaattttggaag 15692



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 222   agatatgggatggtgttcctaaaccccatgcccataaagatactccactcagtgaatttt 281
             |||||||||||||||| ||||||||||||||||| || || |||||||| ||||||||||
Sbjct: 15289 agatatgggatggtgtccctaaaccccatgcccacaaggaaactccactgagtgaatttt 15348

                     
Query: 282   ttaatgta 289
             | ||||||
Sbjct: 15349 tcaatgta 15356



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 174   agacacctttggaaaatcttgaaccgattttaagagaagatattcagaagatatg 228
             |||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 15157 agacacctctggaaaatcttgaaccgattctaagggaagatattcagaaggtatg 15211



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 8     tttgctttggctgtttcggatattgngttgatcaatatgt 47
             ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 14673 tttgctttggctgtttcagatattgtgttgatcaatatgt 14712



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 108   aggtcatgatgagattattcagtcctcgcaaaacaacaatgctatttgttattcgtgaca 167
             |||| ||||||||||| |||||||| || ||||| ||| || | |||||||||||||| |
Sbjct: 14965 aggttatgatgagattgttcagtccacgtaaaacgacattgttgtttgttattcgtgata 15024

                     
Query: 168   aatcaaag 175
             ||||||||
Sbjct: 15025 aatcaaag 15032



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 308   agttatgaggaaaaggaagagttatttaaagagcaggtt 346
             ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 15452 agttatgaggaaaaggaggagttattcaaagagcaggtt 15490
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>ref|NM_112241.3| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE 3) AT3G13870 (RHD3)
           transcript variant AT3G13870.1 mRNA, complete cds
          Length = 2910

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 44  atgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtt 103
           ||||||||||||||||||||  | ||||| || || || || |||||||| |||||||| 
Sbjct: 536 atgtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtg 595

                          
Query: 104 ttccaggtcatgatg 118
           |||||||| ||||||
Sbjct: 596 ttccaggttatgatg 610



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgaga 358
           |||||||| ||||| ||||||  ||| ||||||||||| | ||||||||||
Sbjct: 800 agttatgaagaaaaagaagagcaattcaaagagcaggtctacaatttgaga 850
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>ref|NM_202579.1| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE 3) AT3G13870 (RHD3)
           transcript variant AT3G13870.2 mRNA, complete cds
          Length = 2914

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 44  atgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtt 103
           ||||||||||||||||||||  | ||||| || || || || |||||||| |||||||| 
Sbjct: 540 atgtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtg 599

                          
Query: 104 ttccaggtcatgatg 118
           |||||||| ||||||
Sbjct: 600 ttccaggttatgatg 614



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgaga 358
           |||||||| ||||| ||||||  ||| ||||||||||| | ||||||||||
Sbjct: 804 agttatgaagaaaaagaagagcaattcaaagagcaggtctacaatttgaga 854
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>ref|NM_123884.2| Arabidopsis thaliana ATP binding / GTP binding AT5G45160 mRNA,
           complete cds
          Length = 2753

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           |||||| | |||||| | |||||||   |||| || |||||||| ||||| ||||| || 
Sbjct: 358 tttgctatagctgttgccgatattgtactgataaacatgtggtgccatgacattggaagg 417

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||||||||| ||||| ||  |  | ||||| ||||||||||||||| || |||| || 
Sbjct: 418 gaacaggctgccaacaaaccattgctaaagacagttttccaggtcatgctgcgattgttt 477

                                                             
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcgtgacaaatcaaagac 177
           || ||||| ||||||||  | || ||||| || ||||| ||| |||||||
Sbjct: 478 agccctcgtaaaacaactcttctttttgtcatacgtgataaaacaaagac 527



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 204 taagagaagatattcagaagatatgggat 232
           |||||||||||||||||||||||||||||
Sbjct: 554 taagagaagatattcagaagatatgggat 582



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 383 cctggcggacttgctggagatcggcgtggtgttgttccagcatcaggtttttcatttagc 442
           ||||| ||||||||||| ||| | |||||||| ||||| || ||||| ||||| || |||
Sbjct: 733 cctgggggacttgctggtgatagacgtggtgtagttcctgcttcaggattttctttcagc 792

                   
Query: 443 tcacagca 450
           || |||||
Sbjct: 793 tcccagca 800
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>gb|AY128801.1| Arabidopsis thaliana unknown protein (At3g13870) mRNA, complete cds
          Length = 2538

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 44  atgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtt 103
           ||||||||||||||||||||  | ||||| || || || || |||||||| |||||||| 
Sbjct: 385 atgtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtg 444

                          
Query: 104 ttccaggtcatgatg 118
           |||||||| ||||||
Sbjct: 445 ttccaggttatgatg 459



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgaga 358
           |||||||| ||||| ||||||  ||| ||||||||||| | ||||||||||
Sbjct: 649 agttatgaagaaaaagaagagcaattcaaagagcaggtctacaatttgaga 699
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>gb|AY092988.1| Arabidopsis thaliana unknown protein (At3g13870) mRNA, complete cds
          Length = 2829

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 44  atgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtt 103
           ||||||||||||||||||||  | ||||| || || || || |||||||| |||||||| 
Sbjct: 475 atgtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtg 534

                          
Query: 104 ttccaggtcatgatg 118
           |||||||| ||||||
Sbjct: 535 ttccaggttatgatg 549



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 308 agttatgaggaaaaggaagagttatttaaagagcaggtttccaatttgaga 358
           |||||||| ||||| ||||||  ||| ||||||||||| | ||||||||||
Sbjct: 739 agttatgaagaaaaagaagagcaattcaaagagcaggtctacaatttgaga 789
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>dbj|AK070939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069K05, full
           insert sequence
          Length = 3086

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 44  atgtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtt 103
           |||||||| |||||||||||  | ||||| ||||| || ||||||||| | || || || 
Sbjct: 595 atgtggtgccatgatattggccgggaacaagctgccaataagcctcttctaaaaacagta 654

                                                                       
Query: 104 ttccaggtcatgatgagattattcagtcctcgcaaaacaacaatgctatttgttattcgt 163
           || |||||||||||| | || |||||||| || || |||||| |  |||||||||| |||
Sbjct: 655 tttcaggtcatgatgcgtttgttcagtccccgaaagacaacactattatttgttatacgt 714

             
Query: 164 ga 165
           ||
Sbjct: 715 ga 716
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>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4
          Length = 38810

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 46    gtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtttt 105
             ||||||||||||||||||  | ||||| || || || || |||||||| |||||||| ||
Sbjct: 33754 gtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtgtt 33695

                   
Query: 106   ccaggt 111
             ||||||
Sbjct: 33694 ccaggt 33689
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>gb|U86081.1|ATU86081 Arabidopsis thaliana root hair defective 3 (RHD3) gene, complete cds
          Length = 5741

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                        
Query: 46   gtggtgtcatgatattgggagagaacaggctgcgaacaagcctcttttgaagactgtttt 105
            ||||||||||||||||||  | ||||| || || || || |||||||| |||||||| ||
Sbjct: 1745 gtggtgtcatgatattggtcgggaacaagcagcaaataaacctcttttaaagactgtgtt 1804

                  
Query: 106  ccaggt 111
            ||||||
Sbjct: 1805 ccaggt 1810
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>dbj|AB012240.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18C1
          Length = 71618

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 383   cctggcggacttgctggagatcggcgtggtgttgttccagcatcaggtttttcatttagc 442
             ||||| ||||||||||| ||| | |||||||| ||||| || ||||| ||||| || |||
Sbjct: 20105 cctgggggacttgctggtgatagacgtggtgtagttcctgcttcaggattttctttcagc 20164

                     
Query: 443   tcacagca 450
             || |||||
Sbjct: 20165 tcccagca 20172



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   taagagaagatattcagaag 223
             ||||||||||||||||||||
Sbjct: 19605 taagagaagatattcagaag 19624
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>dbj|AK100485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097D22, full
           insert sequence
          Length = 2649

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           |||||| |||| || || |||||||   |||| ||| |||||||||||||||| ||  ||
Sbjct: 503 tttgctctggcagtatcagatattgttatgataaatttgtggtgtcatgatataggacga 562

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||| || || || | |||||| ||||| ||  | ||  ||||  ||||| | ||||||
Sbjct: 563 gaacatgcagctaataggcctctgttgaaaacaatatttgaggtattgatgcgtttattc 622

                                              
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcg 162
           || || |||||||||||  ||||| ||||||||||
Sbjct: 623 agcccacgcaaaacaacgttgctacttgttattcg 657
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>dbj|AK065661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039D02, full
           insert sequence
          Length = 2784

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                       
Query: 8   tttgctttggctgtttcggatattgngttgatcaatatgtggtgtcatgatattgggaga 67
           |||||| |||| || || |||||||   |||| ||| |||||||||||||||| ||  ||
Sbjct: 503 tttgctctggcagtatcagatattgttatgataaatttgtggtgtcatgatataggacga 562

                                                                       
Query: 68  gaacaggctgcgaacaagcctcttttgaagactgttttccaggtcatgatgagattattc 127
           ||||| || || || | |||||| ||||| ||  | ||  ||||  ||||| | ||||||
Sbjct: 563 gaacatgcagctaataggcctctgttgaaaacaatatttgaggtattgatgcgtttattc 622

                                              
Query: 128 agtcctcgcaaaacaacaatgctatttgttattcg 162
           || || |||||||||||  ||||| ||||||||||
Sbjct: 623 agcccacgcaaaacaacgttgctacttgttattcg 657
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>gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14K14 genomic sequence,
            complete sequence
          Length = 96808

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 37   gatcaatatgtggtgtcatgata 59
            |||||||||||||||||||||||
Sbjct: 5603 gatcaatatgtggtgtcatgata 5581
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>gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L1 genomic sequence, complete
             sequence
          Length = 100515

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 37    gatcaatatgtggtgtcatgata 59
             |||||||||||||||||||||||
Sbjct: 33532 gatcaatatgtggtgtcatgata 33554
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 417     ttccagcatcaggtttttcattt 439
               |||||||||||||||||||||||
Sbjct: 2011171 ttccagcatcaggtttttcattt 2011149
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 69      aacaggctgcgaacaagcctct 90
               ||||||||||||||||||||||
Sbjct: 1583771 aacaggctgcgaacaagcctct 1583792
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>gb|AC006315.2| Homo sapiens PAC clone RP4-630F1 from 7, complete sequence
          Length = 127526

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   aggtcatgatgagattattcag 129
             ||||||||||||||||||||||
Sbjct: 14309 aggtcatgatgagattattcag 14288
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>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 174   agacacctttggaaaatcttgaaccgattttaagagaagatattcagaag 223
             ||||||| ||||||||| | || ||  | |||||||||||||||||||||
Sbjct: 50249 agacaccgttggaaaatttagagcctgtcttaagagaagatattcagaag 50298



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 107   caggtcatgatgagattattcagtcctcgcaaaacaacaatgctatttgt 156
             ||||| |||||| |||| || ||||| || |||||||||||||| |||||
Sbjct: 50083 caggtgatgatgcgattgtttagtccacgtaaaacaacaatgctgtttgt 50132
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>gb|AC159227.3| Mus musculus BAC clone RP24-334D12 from chromosome 12, complete
             sequence
          Length = 211971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   ggtttttcatttagctcacag 448
             |||||||||||||||||||||
Sbjct: 93493 ggtttttcatttagctcacag 93513
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>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 122   ttattcagtcctcgcaaaacaacaatgctatttgttattcg 162
             |||||||| || |||||||||||  ||||| ||||||||||
Sbjct: 33410 ttattcagcccacgcaaaacaacgttgctacttgttattcg 33450
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>gb|AC160390.2| Mus musculus BAC clone RP24-465C5 from chromosome 12, complete sequence
          Length = 152049

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   ggtttttcatttagctcacag 448
             |||||||||||||||||||||
Sbjct: 22859 ggtttttcatttagctcacag 22879
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>gb|AC149803.7| Medicago truncatula clone mth2-70e16, complete sequence
          Length = 96164

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   aaaacaacaatgctatttgtt 157
             |||||||||||||||||||||
Sbjct: 54115 aaaacaacaatgctatttgtt 54135
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>emb|AL390071.9| Human DNA sequence from clone RP11-98D3 on chromosome 13 Contains part of
              the NEAB gene for neurobeachin (BCL8B FLJ10197 KIAA1544),
              the MAB21L1 gene for mab-21-like 1 (C. elegans) (CAGR1) and
              three CpG islands, complete sequence
          Length = 170998

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     agcctcttttgaagactgttt 104
              |||||||||||||||||||||
Sbjct: 130396 agcctcttttgaagactgttt 130416
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 395    gctggagatcggcgtggtgtt 415
              |||||||||||||||||||||
Sbjct: 296116 gctggagatcggcgtggtgtt 296096
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    gctggagatcggcgtggtgtt 415
              |||||||||||||||||||||
Sbjct: 289810 gctggagatcggcgtggtgtt 289830
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    gctggagatcggcgtggtgtt 415
              |||||||||||||||||||||
Sbjct: 171537 gctggagatcggcgtggtgtt 171557
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>emb|AL731774.11| Mouse DNA sequence from clone RP23-61E13 on chromosome X, complete
              sequence
          Length = 224475

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 44     atgtggtgtcatgatattgggagag 68
              |||||||||||||| ||||||||||
Sbjct: 191386 atgtggtgtcatgagattgggagag 191362



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 44   atgtggtgtcatgatattgggagag 68
            |||||||||||||| ||||||||||
Sbjct: 1444 atgtggtgtcatgagattgggagag 1420
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>emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chromosome X, complete
              sequence
          Length = 195259

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 44     atgtggtgtcatgatattgggagag 68
              |||||||||||||| ||||||||||
Sbjct: 189515 atgtggtgtcatgagattgggagag 189491
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>emb|BX679667.8| Mouse DNA sequence from clone RP24-424A15 on chromosome X, complete
             sequence
          Length = 79203

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 67805 atgtggtgtcatgagattgggagag 67781
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>emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chromosome X, complete
             sequence
          Length = 87723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 87167 atgtggtgtcatgagattgggagag 87143
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>emb|CR751562.5| Mouse DNA sequence from clone RP23-240H13 on chromosome X, complete
             sequence
          Length = 26330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 15558 atgtggtgtcatgagattgggagag 15534
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>emb|CR387995.6| Mouse DNA sequence from clone RP23-18L17 on chromosome X, complete
              sequence
          Length = 224892

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 44     atgtggtgtcatgatattgggagag 68
              |||||||||||||| ||||||||||
Sbjct: 150629 atgtggtgtcatgagattgggagag 150653
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 122      ttattcagtcctcgcaaaacaacaatgctatttgttattcg 162
                |||||||| || |||||||||||  ||||| ||||||||||
Sbjct: 21151251 ttattcagcccacgcaaaacaacgttgctacttgttattcg 21151291
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>emb|BX890554.6| Mouse DNA sequence from clone RP23-291C10 on chromosome X, complete
             sequence
          Length = 169236

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 87340 atgtggtgtcatgagattgggagag 87316
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>emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chromosome X, complete
             sequence
          Length = 191028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 72224 atgtggtgtcatgagattgggagag 72200
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>emb|AL672012.7| Mouse DNA sequence from clone RP23-277K12 on chromosome X, complete
            sequence
          Length = 194944

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 44   atgtggtgtcatgatattgggagag 68
            |||||||||||||| ||||||||||
Sbjct: 2127 atgtggtgtcatgagattgggagag 2103
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>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete
             sequence
          Length = 227248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    atgtggtgtcatgatattgggagag 68
             |||||||||||||| ||||||||||
Sbjct: 83538 atgtggtgtcatgagattgggagag 83514
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>emb|BX927237.15| Zebrafish DNA sequence from clone DKEY-29J9 in linkage group 21,
             complete sequence
          Length = 208942

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   taagagaagatattcagaaga 224
             |||||||||||||||||||||
Sbjct: 74841 taagagaagatattcagaaga 74861
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 122      ttattcagtcctcgcaaaacaacaatgctatttgttattcg 162
                |||||||| || |||||||||||  ||||| ||||||||||
Sbjct: 21461492 ttattcagcccacgcaaaacaacgttgctacttgttattcg 21461532
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>emb|BX914222.9| Zebrafish DNA sequence from clone DKEYP-108A2 in linkage group 11,
              complete sequence
          Length = 134368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aacaacaatgctatttgtta 158
              ||||||||||||||||||||
Sbjct: 125203 aacaacaatgctatttgtta 125222
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>gb|AC144833.2| Homo sapiens chromosome 15, clone XXfos-82651E9, complete sequence
          Length = 43185

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   gttatgaggaaaaggaagag 328
             ||||||||||||||||||||
Sbjct: 39800 gttatgaggaaaaggaagag 39819
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>gb|AC124457.4| Mus musculus BAC clone RP24-134O20 from chromosome 7, complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   agaagatattcagaagatat 227
             ||||||||||||||||||||
Sbjct: 31969 agaagatattcagaagatat 31988
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>gb|AC124914.3| Homo sapiens chromosome 3 clone RP11-146K16, complete sequence
          Length = 187803

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ttaacagttatgaggaaaag 322
              ||||||||||||||||||||
Sbjct: 179380 ttaacagttatgaggaaaag 179399
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>emb|AL672216.10| Zebrafish DNA sequence from clone BUSM1-44O19 in linkage group 19
             Contains three novel transposase pseudogenes, a gene for a
             novel flotillin, a gene for a novel zinc finger protein,
             the knsl2 gene (kinesin-like protein 2), the znf297 gene
             (zinc finger protein 297), the 3' part of the daxx gene
             (death-associated protein 6) and a CpG island, complete
             sequence
          Length = 102704

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ttttttaatgtacaagtggt 297
             ||||||||||||||||||||
Sbjct: 38446 ttttttaatgtacaagtggt 38427
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>emb|AJ307671.1|BAC221D7 Mus musculus BAC22107 partial stk33 gene
          Length = 158201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   agaagatattcagaagatat 227
             ||||||||||||||||||||
Sbjct: 21235 agaagatattcagaagatat 21216
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>emb|BX530409.7| Zebrafish DNA sequence from clone DKEY-69K9 in linkage group 15, complete
              sequence
          Length = 245494

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     atcaatatgtggtgtcatga 57
              ||||||||||||||||||||
Sbjct: 204613 atcaatatgtggtgtcatga 204632
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>gb|AC098971.2| Homo sapiens chromosome 3 clone RP11-118N13, complete sequence
          Length = 175409

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ttaacagttatgaggaaaag 322
             ||||||||||||||||||||
Sbjct: 58882 ttaacagttatgaggaaaag 58901
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>gb|AC107457.2| Homo sapiens chromosome 15, clone RP11-321B18, complete sequence
          Length = 40678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gttatgaggaaaaggaagag 328
             ||||||||||||||||||||
Sbjct: 25364 gttatgaggaaaaggaagag 25345
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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ttaagagaagatattcagaa 222
             ||||||||||||||||||||
Sbjct: 67017 ttaagagaagatattcagaa 67036
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>gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, complete sequence
          Length = 45027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gatattcagaagatatggga 231
             ||||||||||||||||||||
Sbjct: 26454 gatattcagaagatatggga 26473
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>gb|AC135326.6| Homo sapiens chromosome 15, clone RP11-70G9, complete sequence
          Length = 17350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  gttatgaggaaaaggaagag 328
            ||||||||||||||||||||
Sbjct: 2302 gttatgaggaaaaggaagag 2321
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>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
            sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  agagaagatattcagaagat 225
            ||||||||||||||||||||
Sbjct: 8571 agagaagatattcagaagat 8552
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>emb|BX927188.11| Zebrafish DNA sequence from clone DKEY-264N13 in linkage group 19,
             complete sequence
          Length = 163213

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ttttttaatgtacaagtggt 297
             ||||||||||||||||||||
Sbjct: 61635 ttttttaatgtacaagtggt 61616


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,254,622
Number of Sequences: 3902068
Number of extensions: 5254622
Number of successful extensions: 95887
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 95637
Number of HSP's gapped (non-prelim): 241
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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