ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15n06 |
|---|---|
| Clone Library Name | barley_pub |
>UGDH_SOYBN (Q96558) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 480 Score = 373 bits (958), Expect = e-103 Identities = 172/193 (89%), Positives = 188/193 (97%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 DILNLVYICECNGLPEVA YWKQVIKINDYQKSRFVNRVV+SMFNTV+NKKIA+LGFAFK Sbjct: 276 DILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAILGFAFK 335 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 KDTGDTRETPAIDVC+GLLGDKA +SIYDPQVTEDQIQRDL+MNKFDWDHP+HLQP SPT Sbjct: 336 KDTGDTRETPAIDVCQGLLGDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPT 395 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKL 553 T K+VSV WDAYEATKDAHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN+VD++KL Sbjct: 396 TVKKVSVVWDAYEATKDAHGLCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIVDADKL 455 Query: 554 REIGFIVYSIGKP 592 REIGFIVYSIGKP Sbjct: 456 REIGFIVYSIGKP 468
>UGDH_DROME (O02373) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Protein sugarless) Length = 476 Score = 205 bits (522), Expect = 7e-53 Identities = 104/193 (53%), Positives = 137/193 (70%), Gaps = 1/193 (0%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 DILNL+YICE LPEVA YW+QVI +N+YQK RF +++ S+FNTV++K+IA+LGFAFK Sbjct: 276 DILNLIYICENLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKRIAILGFAFK 335 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 K+TGDTRET AI VC+ LL + A + IYDP+V +QI DL HP + SP Sbjct: 336 KNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLT-------HPSVTE--SPE 386 Query: 374 TTKQ-VSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEK 550 K+ V + D Y A + H + I TEWDEF LD+K+IY SM KPA++FDGR ++D E+ Sbjct: 387 KVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHER 446 Query: 551 LREIGFIVYSIGK 589 L++IGF V +IGK Sbjct: 447 LQQIGFHVQTIGK 459
>UGDH_HUMAN (O60701) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 196 bits (498), Expect = 4e-50 Identities = 99/194 (51%), Positives = 134/194 (69%), Gaps = 2/194 (1%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D+LNLVY+CE LPEVA YW+QVI +NDYQ+ RF +R++ S+FNTV +KKIA+LGFAFK Sbjct: 280 DVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFK 339 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 KDTGDTRE+ +I + K L+ + A + IYDP+V +QI DL+ D V Sbjct: 340 KDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQV-------- 391 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS--E 547 ++ V+++ D YEA AH + I TEWD FK LDY++I+ M KPAF+FDGR V+D Sbjct: 392 -SRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHN 450 Query: 548 KLREIGFIVYSIGK 589 +L+ IGF + +IGK Sbjct: 451 ELQTIGFQIETIGK 464
>UGDH_BOVIN (P12378) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 196 bits (497), Expect = 6e-50 Identities = 99/194 (51%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D+LNLVY+CE LPEVA YW+QVI +NDYQ+ RF +R++ S+FNTV +KKIA+LGFAFK Sbjct: 280 DVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFK 339 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 KDTGDTRE+ +I + K L+ + A + IYDP+V +QI DL+ D V Sbjct: 340 KDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSKDDQV-------- 391 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS--E 547 + V+++ D YEA AH + I TEWD FK LDY++I+ M KPAF+FDGR V+D Sbjct: 392 -ARLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHN 450 Query: 548 KLREIGFIVYSIGK 589 +L+ IGF + +IGK Sbjct: 451 ELQTIGFQIETIGK 464
>UGDH_MOUSE (O70475) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 196 bits (497), Expect = 6e-50 Identities = 99/194 (51%), Positives = 134/194 (69%), Gaps = 2/194 (1%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D+LNLVY+CE LPEVA YW+QVI +NDYQ+ RF +R++ S+FNTV +KKIA+LGFAFK Sbjct: 280 DVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFK 339 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 KDTGDTRE+ +I + K L+ + A + IYDP+V +QI DL+ D V Sbjct: 340 KDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSADDQV-------- 391 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS--E 547 ++ V+++ D YEA AH + I TEWD FK LDY++I+ M KPAF+FDGR V+D Sbjct: 392 -SRLVTISKDPYEACDGAHALVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHS 450 Query: 548 KLREIGFIVYSIGK 589 +L+ IGF + +IGK Sbjct: 451 ELQTIGFQIETIGK 464
>UGDH_RAT (O70199) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 195 bits (496), Expect = 7e-50 Identities = 99/194 (51%), Positives = 134/194 (69%), Gaps = 2/194 (1%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D+LNLVY+CE LPEVA YW+QVI +NDYQ+ RF +R++ S+FNTV +KKIA+LGFAFK Sbjct: 280 DVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFK 339 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 KDTGDTRE+ +I + K L+ + A + IYDP+V +QI DL+ D V Sbjct: 340 KDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSADDQV-------- 391 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS--E 547 ++ V+++ D YEA AH + I TEWD FK LDY++I+ M KPAF+FDGR V+D Sbjct: 392 -SRLVTISKDPYEACDGAHALVICTEWDMFKELDYERIHKRMLKPAFIFDGRRVLDGLHN 450 Query: 548 KLREIGFIVYSIGK 589 +L+ IGF + +IGK Sbjct: 451 ELQTIGFQIETIGK 464
>UGDH_CAEEL (Q19905) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Squashed vulva protein 4) Length = 481 Score = 187 bits (476), Expect = 2e-47 Identities = 90/191 (47%), Positives = 132/191 (69%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D+L+LVY+CE LP+VA+YW+ VI IN++Q+ RF +++++ +FNTV +KKIA+ GFAFK Sbjct: 287 DVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFK 346 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 K+TGDTRE+ AI V K L+ + AK+S+YDP+V + Q+ DLA D Sbjct: 347 KNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQD----------- 395 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKL 553 + ++V D Y A + AH I ++TEWDEF L+Y +I++ MQ PA +FDGR ++D + L Sbjct: 396 VERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKAL 455 Query: 554 REIGFIVYSIG 586 REIGF ++IG Sbjct: 456 REIGFRTFAIG 466
>UDG_RICCN (Q92GB1) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 432 Score = 88.2 bits (217), Expect = 2e-17 Identities = 54/170 (31%), Positives = 87/170 (51%) Frame = +2 Query: 77 KQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGD 256 K VIK N + S V+++ + + + K IA+LG +K T D R +PAI + K LL Sbjct: 281 KAVIKSNKQRPSNMVDKIATLLDGDLKGKNIAILGLTYKAGTDDVRASPAIAIVKILLNK 340 Query: 257 KAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPTTTKQVSVTWDAYEATKDAHGI 436 + +DP E+ K + +H K + A +A K I Sbjct: 341 DVYVKAFDPIGLENA--------KKNLEH------------KNLLYLDSAVDACKSVDII 380 Query: 437 CIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYSIG 586 I TEW EFK L++++IYD ++ P + D RN++D+E +++IGF Y++G Sbjct: 381 VIATEWSEFKELNWQEIYDLVKSP-IIIDFRNILDNETMKKIGFRYYAVG 429
>UDG_RHIME (O54068) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 437 Score = 85.1 bits (209), Expect = 1e-16 Identities = 50/169 (29%), Positives = 86/169 (50%) Frame = +2 Query: 86 IKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAK 265 + +ND +K +V+++ + KIAVLG FK +T D R++PAI V + L A+ Sbjct: 291 VAVNDNRKRAMGRKVIAAAGGDIRGSKIAVLGLTFKPNTDDMRDSPAIAVVQALQDAGAR 350 Query: 266 ISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPTTTKQVSVTWDAYEATKDAHGICIM 445 ++ YDP+ E+ + + + D YEA +A + I+ Sbjct: 351 VTGYDPEGMEN----------------------ARKLIEGLDCARDPYEAAAEADALVII 388 Query: 446 TEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYSIGKP 592 TEW+EF+ LD+ ++ +M+ P V D RN+ +++ + GF SIG+P Sbjct: 389 TEWNEFRALDFDRLKSTMKTPLLV-DLRNIYRKDEVAKHGFRYASIGRP 436
>UDG_RICPR (O05973) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 434 Score = 84.0 bits (206), Expect = 3e-16 Identities = 52/170 (30%), Positives = 86/170 (50%) Frame = +2 Query: 77 KQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGD 256 K VIK N + S V ++ + + + + IA+LG +K T D R +PAI++ LL Sbjct: 283 KSVIKSNKLRPSNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILLNK 342 Query: 257 KAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPTTTKQVSVTWDAYEATKDAHGI 436 + +DP E+ K + +H K + A EA K I Sbjct: 343 DVYVKAFDPIGLENA--------KKNLEH------------KNLLYFASAVEACKSVDII 382 Query: 437 CIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYSIG 586 I TEW EFK L++++IY+ ++ P + D RN++D+E +++IGF Y++G Sbjct: 383 VIATEWSEFKELNWQEIYNLVKSP-MIIDLRNILDNEVMKKIGFRYYAVG 431
>TUAD_BACSU (O32271) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Teichuronic acid biosynthesis protein tuaD) Length = 461 Score = 83.6 bits (205), Expect = 4e-16 Identities = 55/193 (28%), Positives = 93/193 (48%) Frame = +2 Query: 14 DILNLVYICECNGLPEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFK 193 D L+ I + G P + VI+ N+ Q+ V+++++ M +V + I+VLG AFK Sbjct: 265 DTTALLQIAKSAGYP--FKLIEAVIETNEKQRVHIVDKLLTVM-GSVKGRTISVLGLAFK 321 Query: 194 KDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPT 373 +T D R PA+D+ L A + YD P+ + S Sbjct: 322 PNTNDVRSAPALDIIPMLQQLGAHVKAYD---------------------PIAIPEASAI 360 Query: 374 TTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKL 553 +QV D Y A +D I+T+W E K ++ K+ +++P + DGRN+ E++ Sbjct: 361 LGEQVEYYTDVYAAMEDTDACLILTDWPEVKEMELVKVKTLLKQPV-IIDGRNLFSLEEM 419 Query: 554 REIGFIVYSIGKP 592 + G+I +SIG+P Sbjct: 420 QAAGYIYHSIGRP 432
>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja| UDPGD intein] Length = 895 Score = 73.6 bits (179), Expect = 4e-13 Identities = 53/166 (31%), Positives = 83/166 (50%) Frame = +2 Query: 92 INDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKIS 271 +N+ Q F ++ + + + K AVLG AFK +T D RE+ AI + LL A + Sbjct: 743 VNEEQIKWFFEKI-KNYYGNLNGKTFAVLGLAFKPNTDDLRESRAIKLIDMLLESGAIVK 801 Query: 272 IYDPQVTEDQIQRDLAMNKFDWDHPVHLQPMSPTTTKQVSVTWDAYEATKDAHGICIMTE 451 +D E + + M K D + + V D YE K+ GI I E Sbjct: 802 GFD--YVEKARENTINMYKLDKSKGFY--------GYNLYVLDDLYETVKNVDGIIITVE 851 Query: 452 WDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYSIGK 589 +D F D++KI ++ K VFDGRN++D EK++++GF Y +G+ Sbjct: 852 YD-FNKEDWEKI-GNLVKEKVVFDGRNILDVEKIKKLGFKYYGVGR 895
>UDG_PSEAE (O86422) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 453 Score = 67.8 bits (164), Expect = 2e-11 Identities = 41/144 (28%), Positives = 70/144 (48%) Frame = +2 Query: 161 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWD 340 + +A+ G AFK T D RE P++ + + LL ++ +DP R Sbjct: 317 RTVALWGLAFKPGTDDLREAPSLVLLEALLRHGVRVRAHDPVANAGVAAR---------- 366 Query: 341 HPVHLQPMSPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVF 520 +P ++++ Y A + A + ++TEW +F+ D++KI SM+ P V Sbjct: 367 YP------EAVACARLTLHDSPYAAVEGADALVLVTEWKQFRQPDFQKIRGSMRTPLLV- 419 Query: 521 DGRNVVDSEKLREIGFIVYSIGKP 592 DGRN+ ++ E+GFI IG+P Sbjct: 420 DGRNLYAPARMAELGFIYQGIGRP 443
>Y428_METJA (Q57871) Hypothetical protein MJ0428 (EC 1.1.1.-)| Length = 427 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%) Frame = +2 Query: 164 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQVTEDQIQRDLAMNKFDWDH 343 K+A+ G +K + DTRE+PA V L+ + ++ YD D+ + Sbjct: 309 KVAIFGVTYKGNVDDTRESPAEKVVSKLIDEGFEVKCYDKYAR-------------DFIY 355 Query: 344 PVHLQPMSPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYD--SMQKPAFV 517 P++ EA + A I I+ E DE+K D + I + S K + Sbjct: 356 PLN----------------SLDEAVEGADIIVILAEHDEYKNFDKEDIKNIASKVKNKII 399 Query: 518 FDGRNVVDSEKLREIGFIVYSIG 586 D +N+++ E + GF VY +G Sbjct: 400 LDTKNILNRELWEKEGFKVYVLG 422
>VIPA_SALTI (Q04972) Vi polysaccharide biosynthesis protein vipA/tviB (EC| 1.1.1.-) Length = 425 Score = 45.8 bits (107), Expect = 9e-05 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 7/88 (7%) Frame = +2 Query: 71 YWKQVI----KINDYQKSRFVNRVVSSMFN---TVANKKIAVLGFAFKKDTGDTRETPAI 229 Y+ ++I ++ND + +++ +M V + +LGF FK++ D R T I Sbjct: 278 YYPEIILAGRRLNDNMGNYVSEQLIKAMIKKGINVEGSSVLILGFTFKENCPDIRNTRII 337 Query: 230 DVCKGLLGDKAKISIYDPQVTEDQIQRD 313 DV K L K+ I+DP V ++++R+ Sbjct: 338 DVVKELGKYSCKVDIFDPWVDAEEVRRE 365
>ALGD_AZOVI (P51585) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 436 Score = 43.5 bits (101), Expect = 5e-04 Identities = 19/50 (38%), Positives = 33/50 (66%) Frame = +2 Query: 140 MFNTVANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 M + ++K+A+LG +FK T D RE+P +++ + L+G K+SI+D V Sbjct: 307 MIDKHGSRKVALLGLSFKAGTDDLRESPQLELAEMLIGKGFKLSIFDSNV 356
>ALGD_PSESY (P59793) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 438 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Frame = +2 Query: 131 VSSMFNTVAN---KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 V + F+ VA+ +K+A+LG +FK T D RE+P +++ + L+G +SI+D V Sbjct: 301 VQNAFDMVASYDARKVALLGLSFKAGTDDLRESPLVELAEMLIGKGFDLSIFDSNV 356
>ALGD_PSESM (Q887P8) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 438 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Frame = +2 Query: 131 VSSMFNTVAN---KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 V + F+ VA+ +K+A+LG +FK T D RE+P +++ + L+G +SI+D V Sbjct: 301 VQNAFDMVASYDTRKVALLGLSFKAGTDDLRESPLVELAEMLIGKGFDLSIFDSNV 356
>ALGD_PSESH (O07299) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 438 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Frame = +2 Query: 131 VSSMFNTVAN---KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 V + F+ VA+ +K+A+LG +FK T D RE+P +++ + L+G +SI+D V Sbjct: 301 VQNAFDMVASYDTRKVALLGLSFKAGTDDLRESPLVELAEMLIGKGFDLSIFDSNV 356
>ALGD_PSEPK (Q88NC4) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 438 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/43 (39%), Positives = 29/43 (67%) Frame = +2 Query: 161 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 +K+A+LG +FK T D RE+P +++ + L+G ++ IYD V Sbjct: 314 RKVALLGLSFKAGTDDLRESPLVELAERLIGKGYQLDIYDENV 356
>ALGD_PSEAE (P11759) GDP-mannose 6-dehydrogenase (EC 1.1.1.132) (GMD)| Length = 436 Score = 37.4 bits (85), Expect = 0.033 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +2 Query: 161 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKISIYDPQV 289 +K+ +LG +FK T D RE+P +++ + L+G ++ I+D V Sbjct: 314 RKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNV 356
>WECC_YERPE (Q8ZAE4) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 34.7 bits (78), Expect = 0.21 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANK-------KIAVLGFAFKKDTGDTR 214 P++A +ND + V+RV +++ + +A KIA G AFK D D R Sbjct: 279 PQLARLIHTARLVNDGKPLWVVDRVKAAVADCLAASDKRASEVKIACFGLAFKPDIDDLR 338 Query: 215 ETPAIDVCK 241 E+PA+ V + Sbjct: 339 ESPAVGVAR 347
>WECC_SHIFL (P67067) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVA-------NKKIAVLGFAFKKDTGDTR 214 P+ A + ++ND++ +++V +++ + +A KIA G AFK + D R Sbjct: 279 PQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLR 338 Query: 215 ETPAIDVCK 241 E+PA+++ + Sbjct: 339 ESPAMEIAE 347
>WECC_ECOLI (P27829) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVA-------NKKIAVLGFAFKKDTGDTR 214 P+ A + ++ND++ +++V +++ + +A KIA G AFK + D R Sbjct: 279 PQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLR 338 Query: 215 ETPAIDVCK 241 E+PA+++ + Sbjct: 339 ESPAMEIAE 347
>WECC_ECO57 (P67066) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVA-------NKKIAVLGFAFKKDTGDTR 214 P+ A + ++ND++ +++V +++ + +A KIA G AFK + D R Sbjct: 279 PQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLR 338 Query: 215 ETPAIDVCK 241 E+PA+++ + Sbjct: 339 ESPAMEIAE 347
>EPSD2_RALSO (Q45410) NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase (EC| 1.1.1.-) Length = 423 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDV 235 PE A + ++ND + ++RV + IA G +FK + D RE+PAI++ Sbjct: 285 PESARLIRTAREVNDAKPHYVLDRVKQAA-RRFKEPVIACFGLSFKANIDDLRESPAIEI 343 Query: 236 CKGLLGDK-AKISIYDPQV 289 + ++ + + + +P + Sbjct: 344 VRTMVQQQLGTVLVVEPHI 362
>WECC_SALTY (Q9L6R4) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVA-------NKKIAVLGFAFKKDTGDTR 214 P+ A + ++ND + V++V +++ + +A KIA G AFK + D R Sbjct: 279 PQQARLIRTAREVNDGKPHWVVDQVKAAVTDCLAATDKRASEVKIACFGLAFKPNIDDLR 338 Query: 215 ETPAIDVCKGL 247 E+PA+ + + + Sbjct: 339 ESPAMGIAQSI 349
>WECC_SALTI (Q8Z389) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVA-------NKKIAVLGFAFKKDTGDTR 214 P+ A + ++ND + V++V +++ + +A KIA G AFK + D R Sbjct: 279 PQQARLIRTAREVNDGKPHWVVDQVKAAVADCLAATDKRASEVKIACFGLAFKPNIDDLR 338 Query: 215 ETPAIDVCKGL 247 E+PA+ + + + Sbjct: 339 ESPAMGIAQSI 349
>TGT_CAUCR (Q9A7Y1) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 371 Score = 32.0 bits (71), Expect = 1.4 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +2 Query: 392 VTWDAYEATKDAHGICIMTEW-----DEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLR 556 V W A EA + G+ + W D F T D + ++ Q F+ SE+LR Sbjct: 150 VAWPAEEA-RARKGMELSARWAKRSKDAFGTRDTQVLFGIQQ--GSTFENLRRESSERLR 206 Query: 557 EIGFIVYSIG 586 EIGF Y+IG Sbjct: 207 EIGFDGYAIG 216
>EPSD1_RALSO (P58591) NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase (EC| 1.1.1.-) Length = 423 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = +2 Query: 56 PEVANYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAVLGFAFKKDTGDTRETPAIDV 235 PE A + ++ND + ++RV + IA G +FK + D RE+PAI++ Sbjct: 285 PESARLIRTAREVNDAKPHYVLDRVKQAA-RRFKEPVIACFGLSFKANIDDLRESPAIEI 343 Query: 236 CKGLLGDK-AKISIYDPQV 289 + ++ + + + +P + Sbjct: 344 VQTMVQQQLGTVLVVEPHI 362
>MRAW_BIFLO (Q8G4R0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 359 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Frame = -3 Query: 556 PELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIPLSHDADAMGILGRLIRIPGNRDLLC 377 P L N IA G H++ L LI + D++A+G+ + G D Sbjct: 22 PALEHENAIAVDCTLGLAGHSIAFLKAAPQARLIGIDRDSEALGLATERMEREGLADRFI 81 Query: 376 SCGAHWLEMDRVVPVKFVHR--KVTLDLVFSHLRIINAD 266 A + ++D+V+ + + R V +DL S L+I D Sbjct: 82 PVHAAFDQLDQVLADQDIERVDAVFMDLGLSSLQIDETD 120
>SYFB_MYCHJ (Q4AA64) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 718 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = -3 Query: 277 INADLSLVTKQTLADINSWSLPSVTSILLECKTKHRNLLVRNSVEHRGNNTVHEPALLVV 98 IN D SL++K+T D+N L + + L + + L+ + + +NT P V Sbjct: 378 INFDKSLISKKTFLDLNYNELKEILGLELSQEDISKTNLILEKIGYNFDNTSFSPPFYRV 437 Query: 97 IDLDHLLPVVGDF 59 D++ DF Sbjct: 438 -DIEFFADYAADF 449
>SYFB_MYCH7 (Q4A891) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 718 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = -3 Query: 277 INADLSLVTKQTLADINSWSLPSVTSILLECKTKHRNLLVRNSVEHRGNNTVHEPALLVV 98 IN D SL++K+T D+N L + + L + + L+ + + +NT P V Sbjct: 378 INFDKSLISKKTFLDLNYNELKEILGLELSQEDISKTNLILEKIGYNFDNTSFSPPFYRV 437 Query: 97 IDLDHLLPVVGDF 59 D++ DF Sbjct: 438 -DIEFFADYAADF 449
>SYFB_MYCH2 (Q601U6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 718 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = -3 Query: 277 INADLSLVTKQTLADINSWSLPSVTSILLECKTKHRNLLVRNSVEHRGNNTVHEPALLVV 98 IN D SL++K+T D+N L + + L + + L+ + + +NT P V Sbjct: 378 INFDKSLISKKTFLDLNYNELKEILGLELSQEDISKTNLILEKIGYNFDNTSFSPPFYRV 437 Query: 97 IDLDHLLPVVGDF 59 D++ DF Sbjct: 438 -DIEFFADYAADF 449
>CAPL_STAAU (P39861) Protein capL| Length = 424 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = +2 Query: 89 KINDYQKSRFVNRVVSSMFNT---VANKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDK 259 +IND + V+ + V + VLG FK++ D R T I + + L Sbjct: 283 RINDNMAKYIASNVIKELLKQGLEVQGATVNVLGLTFKENCPDLRNTKVIHIIEELKEYG 342 Query: 260 AKISIYDPQVTEDQIQRDLAMNKFD 334 +++ D + +++ ++ ++ D Sbjct: 343 LNVTVNDVEADKNEAKKFFGLDLID 367
>Y080_BUCAP (Q8KA32) Hypothetical protein BUsg080| Length = 968 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -3 Query: 325 VHRKVTL--DLVFSHLRIINADLSLVTKQTLADINSWSLPSVTSILLECKTKHRNLLVRN 152 + +KV L + ++L + +L + K TL + SLPS +S++L K +N+L N Sbjct: 512 ISKKVNLRSSIYANNLNYFSPNLKGIIKATLNIYSFCSLPSFSSVILGQKINWKNILYFN 571 Query: 151 SVEHRGNNTV 122 +++ N + Sbjct: 572 NIKITTNGNL 581 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,757,407 Number of Sequences: 219361 Number of extensions: 1900529 Number of successful extensions: 6214 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5969 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6195 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
