Clone Name	bags15n05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	236	1e-71
2	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	232	4e-70
3	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	231	4e-70
4	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	228	3e-69
5	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	219	1e-66
6	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	203	1e-59
7	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	203	3e-59
8	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	200	5e-58
9	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	200	5e-58
10	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	200	5e-58
11	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	200	5e-58
12	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	199	1e-57
13	CDC48_YEAST (P25694) Cell division control protein 48	182	6e-49
14	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	182	1e-48
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	179	2e-47
16	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	149	6e-38
17	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	147	1e-36
18	VAT_THEAC (O05209) VCP-like ATPase	137	5e-33
19	SAV_SULAC (Q07590) SAV protein	138	7e-33
20	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	131	9e-31
21	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	131	1e-30
22	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	130	2e-30
23	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	130	2e-30
24	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	130	3e-30
25	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	130	3e-30
26	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	130	3e-30
27	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	129	3e-30
28	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	129	3e-30
29	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	129	3e-30
30	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	129	3e-30
31	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	129	3e-30
32	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	129	3e-30
33	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	129	4e-30
34	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	125	5e-30
35	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	128	7e-30
36	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	122	1e-29
37	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	127	2e-29
38	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	127	2e-29
39	CDCH_HALSA (Q9HPF0) Protein cdcH	127	2e-29
40	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	126	4e-29
41	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	125	5e-29
42	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	124	1e-28
43	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	124	1e-28
44	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	124	2e-28
45	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	123	3e-28
46	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	122	4e-28
47	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	122	4e-28
48	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	122	7e-28
49	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	121	9e-28
50	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	121	1e-27
51	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	121	1e-27
52	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	121	1e-27
53	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	120	2e-27
54	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	120	2e-27
55	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	120	2e-27
56	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	120	2e-27
57	AFG2_YEAST (P32794) Protein AFG2	118	4e-27
58	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	119	4e-27
59	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	119	4e-27
60	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	119	4e-27
61	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	118	5e-27
62	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	118	5e-27
63	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	119	6e-27
64	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	117	6e-27
65	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	118	8e-27
66	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	118	8e-27
67	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	118	1e-26
68	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	118	1e-26
69	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	117	1e-26
70	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	117	2e-26
71	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	117	2e-26
72	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	117	2e-26
73	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	117	2e-26
74	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	116	3e-26
75	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	116	3e-26
76	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	116	3e-26
77	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	115	5e-26
78	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	112	5e-26
79	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	115	5e-26
80	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	114	5e-26
81	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	112	7e-26
82	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	115	8e-26
83	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	115	8e-26
84	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	114	1e-25
85	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	114	1e-25
86	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	110	1e-25
87	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	113	2e-25
88	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	112	5e-25
89	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	99	7e-25
90	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	111	1e-24
91	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	110	2e-24
92	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	110	2e-24
93	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	102	2e-24
94	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	100	3e-24
95	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	108	5e-24
96	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	100	5e-24
97	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	100	5e-24
98	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	109	5e-24
99	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	103	6e-24
100	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	103	6e-24
101	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	102	6e-24
102	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	108	6e-24
103	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	108	6e-24
104	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	100	1e-23
105	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	107	1e-23
106	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	102	2e-23
107	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	102	2e-23
108	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	107	2e-23
109	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	101	2e-23
110	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	107	2e-23
111	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	106	3e-23
112	TBP7_YEAST (P40340) TAT-binding homolog 7	106	4e-23
113	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	100	5e-23
114	PRS8_DROME (O18413) 26S protease regulatory subunit 8	102	5e-23
115	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	101	5e-23
116	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	102	5e-23
117	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	103	5e-23
118	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	105	7e-23
119	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	104	1e-22
120	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	101	2e-22
121	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	101	2e-22
122	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	101	2e-22
123	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	101	2e-22
124	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	102	2e-22
125	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	102	2e-22
126	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	102	2e-22
127	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	103	3e-22
128	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	103	3e-22
129	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	103	3e-22
130	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	103	3e-22
131	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	102	4e-22
132	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	101	4e-22
133	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	102	4e-22
134	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	102	6e-22
135	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	102	6e-22
136	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	99	7e-22
137	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	99	7e-22
138	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	99	7e-22
139	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	99	7e-22
140	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	99	7e-22
141	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	101	1e-21
142	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	101	1e-21
143	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	101	1e-21
144	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	101	1e-21
145	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	101	1e-21
146	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	101	1e-21
147	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	100	2e-21
148	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	97	2e-21
149	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	100	2e-21
150	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	96	3e-21
151	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	100	4e-21
152	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	96	4e-21
153	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	99	6e-21
154	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	99	6e-21
155	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	98	1e-20
156	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	94	1e-20
157	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	94	1e-20
158	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	94	1e-20
159	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	98	1e-20
160	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	98	1e-20
161	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	96	2e-20
162	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	92	2e-20
163	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	95	2e-20
164	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	97	2e-20
165	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	93	3e-20
166	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	96	4e-20
167	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	93	5e-20
168	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	96	6e-20
169	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	93	6e-20
170	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	96	7e-20
171	TBP7_CAEEL (P54816) TAT-binding homolog 7	95	9e-20
172	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	94	1e-19
173	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	94	1e-19
174	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	91	1e-19
175	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	94	1e-19
176	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	94	2e-19
177	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	94	2e-19
178	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	94	2e-19
179	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	94	2e-19
180	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	94	2e-19
181	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	94	2e-19
182	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	92	2e-19
183	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	94	3e-19
184	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	94	3e-19
185	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	93	3e-19
186	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	93	3e-19
187	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	92	8e-19
188	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	92	1e-18
189	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	91	1e-18
190	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	90	3e-18
191	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	83	3e-18
192	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	89	6e-18
193	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	84	7e-18
194	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	81	1e-17
195	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	81	1e-17
196	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	88	1e-17
197	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	86	4e-17
198	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	80	7e-17
199	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	78	1e-16
200	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	79	2e-16
201	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	83	4e-16
202	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	83	5e-16
203	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	77	6e-16
204	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	81	2e-15
205	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	74	2e-14
206	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	77	3e-14
207	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	75	7e-14
208	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	75	7e-14
209	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	67	2e-13
210	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	73	5e-13
211	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	72	6e-13
212	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	70	2e-12
213	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	70	3e-12
214	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	70	4e-12
215	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	67	4e-12
216	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	68	1e-11
217	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	64	4e-11
218	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	64	4e-11
219	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	64	4e-11
220	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	66	4e-11
221	MSP1_CAEEL (P54815) Protein MSP1 homolog	66	4e-11
222	SPAST_HUMAN (Q9UBP0) Spastin	66	6e-11
223	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	66	6e-11
224	SPAST_MOUSE (Q9QYY8) Spastin	66	6e-11
225	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	64	2e-10
226	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	64	3e-10
227	Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL	57	3e-08
228	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	57	3e-08
229	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	54	3e-07
230	SAP1_YEAST (P39955) Protein SAP1	52	9e-07
231	YCF2_MARPO (P09975) Protein ycf2	47	3e-05
232	YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC ...	47	3e-05
233	YCF2_ANTFO (Q859W7) Protein ycf2	45	1e-04
234	PCH2_YEAST (P38126) Pachytene checkpoint protein 2	45	1e-04
235	BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-...	44	3e-04
236	YCF2_PSINU (Q8WHW9) Protein ycf2	42	0.001
237	YCF2_PINTH (P41653) Protein ycf2	41	0.002
238	YCF2_PINKO (Q85WV5) Protein ycf2	40	0.003
239	YCF2_PHYPA (P61243) Protein ycf2	40	0.004
240	BCS1_YEAST (P32839) Mitochondrial chaperone BCS1	39	0.010
241	BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot...	39	0.010
242	PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2	39	0.010
243	BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot...	38	0.013
244	BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot...	37	0.022
245	BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.084
246	YCF2_ADICA (Q85B60) Protein ycf2	34	0.19
247	GATB_MYCTU (P64199) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe...	31	2.1
248	GATB_MYCBO (P64200) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe...	31	2.1
249	NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	31	2.1
250	NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	31	2.1
251	RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabapt...	30	3.5
252	RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Raba...	30	3.5
253	YOBD_SALTI (Q8Z671) UPF0266 membrane protein yobD	30	4.6
254	YOBD_SALTY (Q8ZP01) UPF0266 membrane protein yobD	29	6.0
255	U520_HUMAN (O75643) U5 small nuclear ribonucleoprotein 200 kDa h...	29	7.8
256	CO6_PONPY (P61135) Complement component C6 precursor	29	7.8
257	YCF2_EPIVI (P30072) Protein ycf2	29	7.8
258	APCE_CYACA (Q9TLS6) Phycobilisome linker polypeptide (Anchor pol...	29	7.8
259	RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Raba...	29	7.8
260	ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)	29	7.8
261	LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3....	29	7.8

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  236 bits (603), Expect(2) = 1e-71
 Identities = 119/139 (85%), Positives = 121/139 (87%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ               LNQ
Sbjct: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQ 607

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD DSRHQIFKACLRK
Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SPL+KDIDL ALAK+TQGF
Sbjct: 668 SPLSKDIDLRALAKHTQGF 686



 Score =  104 bits (259), Expect(2) = 6e-23
 Identities = 55/139 (39%), Positives = 87/139 (62%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI---VSQ 331

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I I +PD   R ++     + 
Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKN 391

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA+++DL  ++K T G+
Sbjct: 392 MKLAEEVDLERISKDTHGY 410



 Score = 52.8 bits (125), Expect(2) = 1e-71
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACKYAIRENIEKD
Sbjct: 687 SGADVTEICQRACKYAIRENIEKD 710



 Score = 21.9 bits (45), Expect(2) = 6e-23
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE ++
Sbjct: 412 GADLAALCTEAALQCIREKMD 432

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  232 bits (592), Expect(2) = 4e-70
 Identities = 116/139 (83%), Positives = 121/139 (87%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ               LNQ
Sbjct: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQ 607

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD +SR+QIFK+CLRK
Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+DL ALAKYTQGF
Sbjct: 668 SPVAKDVDLRALAKYTQGF 686



 Score =  107 bits (266), Expect(2) = 1e-23
 Identities = 56/139 (40%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI---VSQ 331

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I I +PD   R ++ +   + 
Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 391

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA+D+DL  ++K T G+
Sbjct: 392 MKLAEDVDLERVSKDTHGY 410



 Score = 52.0 bits (123), Expect(2) = 4e-70
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGADITEICQR+CKYAIRENIEKD
Sbjct: 687 SGADITEICQRSCKYAIRENIEKD 710



 Score = 21.9 bits (45), Expect(2) = 1e-23
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE ++
Sbjct: 412 GADLAALCTEAALQCIREKMD 432

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score =  231 bits (589), Expect(2) = 4e-70
 Identities = 115/139 (82%), Positives = 121/139 (87%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ               LNQ
Sbjct: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQ 607

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDGM+AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD DSRHQIFKACLRK
Sbjct: 608 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AK++DL ALA++TQGF
Sbjct: 668 SPIAKNVDLRALARHTQGF 686



 Score =  107 bits (268), Expect(2) = 6e-24
 Identities = 57/139 (41%), Positives = 87/139 (62%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI---VSQ 331

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+ ++  V +IGATNRP+ IDPAL R GR D+ I I +PD   R ++ +   + 
Sbjct: 332 LLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN 391

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L+ D+DL  +AK T G+
Sbjct: 392 MKLSDDVDLERIAKDTHGY 410



 Score = 53.1 bits (126), Expect(2) = 4e-70
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGADITEICQRACKYAIRENIEKD
Sbjct: 687 SGADITEICQRACKYAIRENIEKD 710



 Score = 21.9 bits (45), Expect(2) = 6e-24
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE ++
Sbjct: 412 GADLAALCTEAALQCIREKMD 432

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  228 bits (581), Expect(2) = 3e-69
 Identities = 115/139 (82%), Positives = 119/139 (85%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ               LNQ
Sbjct: 547 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQ 606

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDGMNAKKTVFIIGATNRPDIID ALLRPGRLDQLIYIPLPD DSR  IFKACLRK
Sbjct: 607 LLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+D++ALAKYTQGF
Sbjct: 667 SPVAKDVDVTALAKYTQGF 685



 Score =  107 bits (267), Expect(2) = 8e-24
 Identities = 56/139 (40%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI---VSQ 330

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I I +PD   R ++ +   + 
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA+D+DL  ++K T G+
Sbjct: 391 MKLAEDVDLERISKDTHGY 409



 Score = 53.1 bits (126), Expect(2) = 3e-69
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGADITEICQRACKYAIRENIEKD
Sbjct: 686 SGADITEICQRACKYAIRENIEKD 709



 Score = 21.9 bits (45), Expect(2) = 8e-24
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE ++
Sbjct: 411 GADLAALCTEAALQCIREKMD 431

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  219 bits (559), Expect(2) = 1e-66
 Identities = 114/140 (81%), Positives = 117/140 (83%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXX-LN 177
           GPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ                LN
Sbjct: 547 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLN 606

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           QLLTEMDGMNAKKTVFIIGATNRPDIID ALLRPGRLDQLIYIPLPD DSR  IFKA LR
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALR 666

Query: 358 KSPLAKDIDLSALAKYTQGF 417
           KSP+AKD+D+ ALAKYTQGF
Sbjct: 667 KSPIAKDVDIGALAKYTQGF 686



 Score =  107 bits (267), Expect(2) = 8e-24
 Identities = 56/139 (40%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 274 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI---VSQ 330

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I I +PD   R ++ +   + 
Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA+D+DL  ++K T G+
Sbjct: 391 MKLAEDVDLERISKDTHGY 409



 Score = 53.1 bits (126), Expect(2) = 1e-66
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGADITEICQRACKYAIRENIEKD
Sbjct: 687 SGADITEICQRACKYAIRENIEKD 710



 Score = 21.9 bits (45), Expect(2) = 8e-24
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE ++
Sbjct: 411 GADLAALCTEAALQCIREKMD 431

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score =  203 bits (517), Expect(2) = 1e-59
 Identities = 103/140 (73%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           GPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA  +               +N
Sbjct: 550 GPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVIN 609

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           Q+LTEMDGMNAKK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SRHQI KA LR
Sbjct: 610 QVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLR 669

Query: 358 KSPLAKDIDLSALAKYTQGF 417
           K+PL+KD+DL+ LAK T GF
Sbjct: 670 KTPLSKDLDLTFLAKNTVGF 689



 Score = 97.4 bits (241), Expect(2) = 2e-21
 Identities = 53/139 (38%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++   + P +LF DE+D+IA +               ++Q
Sbjct: 277 GPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVERRI---VSQ 333

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  + +I ATNRP+ ID AL R GR D+ I I +PD   R +I +   + 
Sbjct: 334 LLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 393

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA D+DL  +A    GF
Sbjct: 394 MKLADDVDLEQIANECHGF 412



 Score = 45.8 bits (107), Expect(2) = 1e-59
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IEK+
Sbjct: 690 SGADLTEICQRACKLAIRESIEKE 713



 Score = 23.5 bits (49), Expect(2) = 2e-21
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE +E
Sbjct: 414 GADLASLCSEAALQQIREKME 434

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score =  203 bits (516), Expect(2) = 3e-59
 Identities = 102/139 (73%), Positives = 112/139 (80%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 549 GPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQ 608

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGMNAKK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR QIFKA LRK
Sbjct: 609 VLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668

Query: 361 SPLAKDIDLSALAKYTQGF 417
           +PL+ D+DL+ LAK T GF
Sbjct: 669 TPLSADLDLNFLAKNTVGF 687



 Score = 96.3 bits (238), Expect(2) = 7e-21
 Identities = 53/139 (38%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F +   ++P +LF DE+D+IA +               ++Q
Sbjct: 276 GPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRI---VSQ 332

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V +I ATNRP+ ID AL R GR D+ I I +PD   R +I +   + 
Sbjct: 333 LLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 392

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L +D+DL  +A    GF
Sbjct: 393 MKLGEDVDLEQVANECHGF 411



 Score = 44.7 bits (104), Expect(2) = 3e-59
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE++
Sbjct: 688 SGADLTEICQRACKLAIRESIERE 711



 Score = 23.1 bits (48), Expect(2) = 7e-21
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A    IRE +E
Sbjct: 413 GADLASLCSEAAIQQIREKME 433

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  200 bits (508), Expect(2) = 5e-58
 Identities = 102/139 (73%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 543 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 602

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR  I KA LRK
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+DL  LAK T GF
Sbjct: 663 SPVAKDVDLEFLAKMTNGF 681



 Score =  103 bits (256), Expect(2) = 1e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DELD+IA +               ++Q
Sbjct: 270 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 326

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R +I +   + 
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA D+DL  +A  T G
Sbjct: 387 MKLADDVDLEQVANETHG 404



 Score = 43.9 bits (102), Expect(2) = 5e-58
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE +
Sbjct: 682 SGADLTEICQRACKLAIRESIESE 705



 Score = 22.3 bits (46), Expect(2) = 1e-22
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A   AIR+ ++
Sbjct: 407 GADLAALCSEAALQAIRKKMD 427

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  200 bits (508), Expect(2) = 5e-58
 Identities = 102/139 (73%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 543 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 602

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR  I KA LRK
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+DL  LAK T GF
Sbjct: 663 SPVAKDVDLEFLAKMTNGF 681



 Score =  103 bits (256), Expect(2) = 1e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DELD+IA +               ++Q
Sbjct: 270 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 326

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R +I +   + 
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA D+DL  +A  T G
Sbjct: 387 MKLADDVDLEQVANETHG 404



 Score = 43.9 bits (102), Expect(2) = 5e-58
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE +
Sbjct: 682 SGADLTEICQRACKLAIRESIESE 705



 Score = 22.3 bits (46), Expect(2) = 1e-22
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A   AIR+ ++
Sbjct: 407 GADLAALCSEAALQAIRKKMD 427

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  200 bits (508), Expect(2) = 5e-58
 Identities = 102/139 (73%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 543 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 602

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR  I KA LRK
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+DL  LAK T GF
Sbjct: 663 SPVAKDVDLEFLAKMTNGF 681



 Score =  103 bits (256), Expect(2) = 1e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DELD+IA +               ++Q
Sbjct: 270 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 326

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R +I +   + 
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA D+DL  +A  T G
Sbjct: 387 MKLADDVDLEQVANETHG 404



 Score = 43.9 bits (102), Expect(2) = 5e-58
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE +
Sbjct: 682 SGADLTEICQRACKLAIRESIESE 705



 Score = 22.3 bits (46), Expect(2) = 1e-22
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A   AIR+ ++
Sbjct: 407 GADLAALCSEAALQAIRKKMD 427

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  200 bits (508), Expect(2) = 5e-58
 Identities = 102/139 (73%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 543 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 602

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR  I KA LRK
Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+DL  LAK T GF
Sbjct: 663 SPVAKDVDLEFLAKMTNGF 681



 Score =  103 bits (256), Expect(2) = 1e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DELD+IA +               ++Q
Sbjct: 270 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 326

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R +I +   + 
Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA D+DL  +A  T G
Sbjct: 387 MKLADDVDLEQVANETHG 404



 Score = 43.9 bits (102), Expect(2) = 5e-58
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE +
Sbjct: 682 SGADLTEICQRACKLAIRESIESE 705



 Score = 22.3 bits (46), Expect(2) = 1e-22
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A   AIR+ ++
Sbjct: 407 GADLAALCSEAALQAIRKKMD 427

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  199 bits (505), Expect(2) = 1e-57
 Identities = 101/139 (72%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSIA                 +NQ
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +LTEMDGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLPD  SR  I KA LRK
Sbjct: 604 ILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663

Query: 361 SPLAKDIDLSALAKYTQGF 417
           SP+AKD+D+  LAK T GF
Sbjct: 664 SPVAKDVDVDFLAKMTNGF 682



 Score =  101 bits (251), Expect(2) = 4e-22
 Identities = 54/138 (39%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DELD+IA +               ++Q
Sbjct: 271 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 327

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R +I +   + 
Sbjct: 328 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKN 387

Query: 361 SPLAKDIDLSALAKYTQG 414
             L+ D+DL  +A  T G
Sbjct: 388 MKLSDDVDLEQVANETHG 405



 Score = 43.9 bits (102), Expect(2) = 1e-57
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+TEICQRACK AIRE+IE +
Sbjct: 683 SGADLTEICQRACKLAIRESIENE 706



 Score = 22.3 bits (46), Expect(2) = 4e-22
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A   AIR+ ++
Sbjct: 408 GADLAALCSEAALQAIRKKMD 428

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  182 bits (461), Expect(2) = 6e-49
 Identities = 89/139 (64%), Positives = 107/139 (76%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELL+MW+GESE+N+R+IFDKAR +AP V+F DELDSIA                 +NQ
Sbjct: 554 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQ 613

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDGMNAKK VF+IGATNRPD IDPA+LRPGRLDQLIY+PLPD ++R  I  A LRK
Sbjct: 614 LLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRK 673

Query: 361 SPLAKDIDLSALAKYTQGF 417
           +PL   ++L+A+AK TQGF
Sbjct: 674 TPLEPGLELTAIAKATQGF 692



 Score =  112 bits (280), Expect(2) = 9e-26
 Identities = 59/139 (42%), Positives = 86/139 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  +AP ++F DE+DSIA +               ++Q
Sbjct: 281 GPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRV---VSQ 337

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDGM A+  V +I ATNRP+ IDPAL R GR D+ + I +PD   R ++ +   + 
Sbjct: 338 LLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKN 397

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA D+DL ALA  T G+
Sbjct: 398 MKLADDVDLEALAAETHGY 416



 Score = 31.6 bits (70), Expect(2) = 6e-49
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGAD+  I QRA KYAI+++IE
Sbjct: 693 SGADLLYIVQRAAKYAIKDSIE 714



 Score = 23.5 bits (49), Expect(2) = 9e-26
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GADI  +C  A    IRE ++
Sbjct: 418 GADIASLCSEAAMQQIREKMD 438

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  182 bits (462), Expect(2) = 1e-48
 Identities = 89/139 (64%), Positives = 109/139 (78%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELL+MWFGESE+NVR+IFDKAR +APCV+F DELDSIA +               +NQ
Sbjct: 564 GPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIA-KARGASAGDSGGGDRVVNQ 622

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG+N+KK VF+IGATNRPD IDPAL+RPGRLDQLIY+PLPD ++R  I +  LR 
Sbjct: 623 LLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRH 682

Query: 361 SPLAKDIDLSALAKYTQGF 417
           +P+A+D+DL A+AK T GF
Sbjct: 683 TPVAEDVDLRAVAKATHGF 701



 Score =  107 bits (266), Expect(2) = 1e-23
 Identities = 55/139 (39%), Positives = 85/139 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++   GESE+N+R+ F++A  ++P ++F DE+DSIA +               ++Q
Sbjct: 291 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRV---VSQ 347

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDGM A+  V ++ ATNRP+ IDPAL R GR D+ + + +PD   R +I +   + 
Sbjct: 348 LLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKN 407

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA D+DL  +A  T G+
Sbjct: 408 MKLADDVDLEQIAAETHGY 426



 Score = 30.0 bits (66), Expect(2) = 1e-48
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SGAD+  + QRA K AI+++IE+D
Sbjct: 702 SGADLEFVVQRAVKLAIKDSIEED 725



 Score = 21.6 bits (44), Expect(2) = 1e-23
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           G+D+  +C  A    IRE ++
Sbjct: 428 GSDLASLCSEAAMQQIREKMD 448

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score =  179 bits (453), Expect(2) = 2e-47
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELLTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +               +NQ
Sbjct: 1001 GPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRV--INQ 1058

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            +LTE+DG+N KKT+FII ATNRPDI+D AL RPGRLD+LIYI LPD+ SR+ IFKA L+ 
Sbjct: 1059 ILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118

Query: 361  SPLAKDIDLSALAKYTQGF 417
            +PL +D+D+  +AK T+GF
Sbjct: 1119 TPLNEDVDIHDMAKRTEGF 1137



 Score =  109 bits (272), Expect(2) = 3e-24
 Identities = 57/139 (41%), Positives = 81/139 (58%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPE+++   GESE  +R+IF KA    PC++F DE+DSIA +               ++Q
Sbjct: 594  GPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRV---VSQ 650

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            LLT MDG+     V ++ ATNRP+ IDPAL R GR D+ I IP+PD   R++I     +K
Sbjct: 651  LLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKK 710

Query: 361  SPLAKDIDLSALAKYTQGF 417
              L  D++L  +AK   G+
Sbjct: 711  MKLDPDVNLRKIAKECHGY 729



 Score = 29.3 bits (64), Expect(2) = 2e-47
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 419  SGADITEICQRACKYAIRENI 481
            SGADIT +CQ A   AI+E I
Sbjct: 1138 SGADITNLCQSAVNEAIKETI 1158



 Score = 21.6 bits (44), Expect(2) = 3e-24
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENI 481
           GAD+ ++C  A    I+E+I
Sbjct: 731 GADLAQLCFEAAIQCIKEHI 750

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score =  149 bits (377), Expect(2) = 6e-38
 Identities = 75/139 (53%), Positives = 96/139 (69%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+ + W GESE  +REIF KAR SAPC++FFDE+D+IA +               +NQ
Sbjct: 519 GPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKV--VNQ 576

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTE+DGM   K V +I ATNRPDIIDPALLRPGRLD++I +P+PD  +R  IFK   R 
Sbjct: 577 LLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRS 636

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA+D++L  LAK T+G+
Sbjct: 637 MNLAEDVNLEELAKKTEGY 655



 Score =  120 bits (300), Expect = 3e-27
 Identities = 61/139 (43%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++ + GE+E N+R+IF++A  +AP ++F DE+D+IA +                 Q
Sbjct: 246 GPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVA---Q 302

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V +IGATNRP+ +DPAL RPGR D+ I I +PD + R +I +   R 
Sbjct: 303 LLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRN 362

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA+D+DL  LA  T GF
Sbjct: 363 MPLAEDVDLDYLADVTHGF 381



 Score = 26.9 bits (58), Expect(2) = 6e-38
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEK 487
           +GADI  +C+ A   A+RE+I K
Sbjct: 656 TGADIEALCREAAMLAVRESIGK 678

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score =  147 bits (370), Expect(2) = 1e-36
 Identities = 75/139 (53%), Positives = 98/139 (70%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELL+ W GESE +VRE+F KAR  APCV+FFDE+DS+A +               ++Q
Sbjct: 522 GPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERV--VSQ 579

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTE+DG+   K V +I ATNRPD+IDPALLRPGRL++ IYIP PD  +R +IFK  LR 
Sbjct: 580 LLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRG 639

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA D+++  LA+ T+G+
Sbjct: 640 KPLADDVNIEELAEKTEGY 658



 Score =  127 bits (318), Expect(2) = 1e-29
 Identities = 65/139 (46%), Positives = 90/139 (64%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++ ++GESE  +REIF++A+ +AP ++F DE+DSIA +                 Q
Sbjct: 249 GPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVVA---Q 305

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDG+ A+  V +I ATNRPD IDPAL RPGR D+ I I +PD + R +I +   RK
Sbjct: 306 LLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRK 365

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA+D+DL  LA+ T GF
Sbjct: 366 MPLAEDVDLEELAELTNGF 384



 Score = 25.4 bits (54), Expect(2) = 1e-36
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADI  +C+ A   AIRE I+
Sbjct: 659 SGADIEAVCREAGMLAIRELIK 680



 Score = 21.6 bits (44), Expect(2) = 1e-29
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 422 GADITEICQRACKYAIR 472
           GAD+  +C+ A  +A+R
Sbjct: 386 GADLEALCKEAAMHALR 402

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score =  137 bits (346), Expect(2) = 5e-33
 Identities = 69/139 (49%), Positives = 92/139 (66%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+L+ W GESE  +REIF KA+  AP ++F DE+DSIA +               +NQ
Sbjct: 534 GPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERI--VNQ 591

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT +DG+     V +IGATNRPDI+DPALLR GR D+LIYIP PD ++R  I K   + 
Sbjct: 592 LLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKN 651

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA D+DL+ +A+ T+G+
Sbjct: 652 MPLAPDVDLNDIAQRTEGY 670



 Score =  108 bits (270), Expect = 8e-24
 Identities = 63/144 (43%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++ ++G+SE  +REIF KA  +AP ++F DE+DSIA +                 Q
Sbjct: 257 GPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVA---Q 313

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDGM  +  V +IGATNR D IDPAL RPGR D+ I I +PD + R +I     R 
Sbjct: 314 LLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRN 373

Query: 361 SPLA-----KDIDLSALAKYTQGF 417
            PL      K+  L  +A YT GF
Sbjct: 374 MPLGMSEEEKNKFLEEMADYTYGF 397



 Score = 22.3 bits (46), Expect(2) = 5e-33
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 422 GADITEICQRACKYAIREN 478
           GAD+  +C+ A   A REN
Sbjct: 672 GADLENLCREAGMNAYREN 690

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score =  138 bits (348), Expect = 7e-33
 Identities = 71/139 (51%), Positives = 91/139 (65%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+L+ W GESE  +REIF KAR +AP V+FFDE+DSIA                 +NQ
Sbjct: 554 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAP--IRGLSTDSGVTERIVNQ 611

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG+     V II ATNRPDI+DPALLRPGR D+LIY+P PD  +R +I K   + 
Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA+D+ L  +A+  +G+
Sbjct: 672 VPLAEDVSLEDIAEKAEGY 690



 Score =  117 bits (294), Expect(2) = 1e-26
 Identities = 61/139 (43%), Positives = 83/139 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++ ++GESE  +REIF +A  +AP ++F DE+D+IA +                 Q
Sbjct: 279 GPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVA---Q 335

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V +IGATNRPD IDPAL RPGR D+ I I  PD   R  I +   R 
Sbjct: 336 LLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRN 395

Query: 361 SPLAKDIDLSALAKYTQGF 417
            P+  D+DL  LA+ T G+
Sbjct: 396 MPITDDVDLDKLAEMTYGY 414



 Score = 21.2 bits (43), Expect(2) = 1e-26
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEK 487
           +GAD+  + + A  YA+R  +++
Sbjct: 415 TGADLAALAKEAAIYALRRFVDE 437

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score =  131 bits (330), Expect = 9e-31
 Identities = 64/138 (46%), Positives = 88/138 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VREIF+ AR  AP ++F DELDSIA +               L Q
Sbjct: 226 GSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQ 285

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +K + II ATNRPD++DPA+LRPGR D+L+++P+P +++R +I K    K
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEK 345

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA+DID   LAK T+G
Sbjct: 346 MTLAEDIDFKKLAKATEG 363

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 856

 Score =  131 bits (329), Expect = 1e-30
 Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESE  VR++F +A+ SAPCV+FFDE+D++  +               +NQ
Sbjct: 648  GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRV---VNQ 704

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR- 357
            LLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    R  I K   + 
Sbjct: 705  LLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN 764

Query: 358  --KSPLAKDIDLSALA 399
              K PL  D++L A+A
Sbjct: 765  GTKPPLDADVNLEAIA 780



 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           PE+++   GESE  +RE+F++A  +APC++F DE+D+I  +                 QL
Sbjct: 332 PEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVA---QL 388

Query: 184 LTEMDGMN---AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           LT MD +N   A   V +IGATNRPD +DPAL R GR D+ I + +PD  SR +I +   
Sbjct: 389 LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC 448

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           RK  L +  D   LA  T GF
Sbjct: 449 RKLRLPQAFDFCHLAHLTPGF 469

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  130 bits (327), Expect = 2e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ +R SAPC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG +  + + +I ATNRPD++DPALLRPGR D+ + + LPD+  R QI K  +RK
Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRK 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL+KD+D   +A+ T GF
Sbjct: 338 VPLSKDVDPMIIARGTPGF 356

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  130 bits (327), Expect = 2e-30
 Identities = 61/139 (43%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ AR SAPC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG +  + V +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +RK
Sbjct: 278 MLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRK 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL++D+D   +A+ T GF
Sbjct: 338 VPLSEDVDPMIIARGTPGF 356

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score =  130 bits (326), Expect = 3e-30
 Identities = 64/138 (46%), Positives = 87/138 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VREIF+ AR  AP ++F DELDSIA +               L Q
Sbjct: 226 GSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQ 285

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +K + II ATNRPD++DPA+LRPGR D+L+++P+P +++R +I K    K
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGK 345

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA DID   LAK T+G
Sbjct: 346 MTLAGDIDFKKLAKVTEG 363

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score =  130 bits (326), Expect = 3e-30
 Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDE+DS+A +               ++Q
Sbjct: 798  GPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPK-RGNQGDSGGVMDRIVSQ 856

Query: 181  LLTEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH-QIFKACL 354
            LL E+DGM+     VF+IGATNRPD++D ALLRPGR D+L+Y+ +PD D++   I +A  
Sbjct: 857  LLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALT 916

Query: 355  RKSPLAKDIDLSALAK 402
            RK  L  D+ L  LAK
Sbjct: 917  RKFVLDNDVKLIELAK 932

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score =  130 bits (326), Expect = 3e-30
 Identities = 68/137 (49%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A Q               ++Q
Sbjct: 785  GPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQ-RGNQGDSGGVMDRIVSQ 843

Query: 181  LLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ-IFKAC 351
            LL E+DGM+    + VF++GATNRPD++D ALLRPGR D+++Y+ + D   + Q I +A 
Sbjct: 844  LLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEAL 903

Query: 352  LRKSPLAKDIDLSALAK 402
             RK  LA D+ L A++K
Sbjct: 904  TRKFRLAADVSLEAISK 920



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
 Frame = +1

Query: 28  GESEAN----VREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 195
           G++EA     +R   D+A G +PCV+    L+SIA +               L  +L + 
Sbjct: 508 GDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLESIAKK--SDQDGKDEGIVSKLVDVLADY 565

Query: 196 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
            G      V +   +N PD I  A+    R    I I +P    R QIF    +  P
Sbjct: 566 SGHG----VLLAATSNDPDKISEAI--RSRFQFEIEIGVPSEPQRRQIFSHLTKSGP 616

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score =  129 bits (325), Expect = 3e-30
 Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPELL  + GESE ++R++F +AR S PCV+FFDELD++  +               +N 
Sbjct: 600 GPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV---VNT 656

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTE+DG+N ++ +F+IGATNRPD+IDPA+LRPGRLD+ ++I LP+ + +  I K   + 
Sbjct: 657 LLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKS 716

Query: 361 --SPLAKDIDLSALAK 402
             +PL+ D+D   + +
Sbjct: 717 HGTPLSSDVDFEEIIR 732



 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 58/142 (40%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           P +++   GESE  +R++FD+AR  APC++FFDE+D+I  +                 QL
Sbjct: 273 PSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVA--QL 330

Query: 184 LTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKAC 351
           LT MD +  +KT    V IIGATNRPD +D AL R GR D+ I + +P+  SR  I K  
Sbjct: 331 LTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKM 390

Query: 352 LRKSPLAKDIDLSALAKYTQGF 417
                +   ID + LAK T GF
Sbjct: 391 SDNLKIDGAIDFAKLAKLTPGF 412

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG    + + +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +R+
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA DID + +A+ T GF
Sbjct: 338 VPLAPDIDAAIIARGTPGF 356

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG    + + +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +R+
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA DID + +A+ T GF
Sbjct: 338 VPLATDIDAAIIARGTPGF 356

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG    + + +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +R+
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA DID + +A+ T GF
Sbjct: 338 VPLATDIDAAIIARGTPGF 356

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG    + + +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +R+
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA DID + +A+ T GF
Sbjct: 338 VPLAPDIDAAIIARGTPGF 356

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG    + + +I ATNRPD++DPALLRPGR D+ + + LPDV  R QI K  +R+
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA DID + +A+ T GF
Sbjct: 338 VPLAPDIDAAIIARGTPGF 356

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 855

 Score =  129 bits (324), Expect = 4e-30
 Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESE  VR++F +A+ SAPCV+FFDE+D++  +               +NQ
Sbjct: 647  GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRV---VNQ 703

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR- 357
            LLTEMDG+  ++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    R  I K   + 
Sbjct: 704  LLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKN 763

Query: 358  --KSPLAKDIDLSALA 399
              K PL +D++L  +A
Sbjct: 764  GTKPPLDEDVNLETIA 779



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           PE+++   GESE  +RE+FD+A  +APC++F DE+D+I  +                 QL
Sbjct: 331 PEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVA---QL 387

Query: 184 LTEMDGMN---AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           LT MD +N   A   V +IGATNRPD +DPAL R GR D+ + + +PD  +R +I +   
Sbjct: 388 LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLC 447

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           RK  L +  +   LA  T GF
Sbjct: 448 RKLRLPETFNFCHLAHLTPGF 468

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score =  125 bits (313), Expect(2) = 5e-30
 Identities = 64/137 (46%), Positives = 84/137 (61%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           PEL+  + GE    VRE+F+ AR  AP ++F DE+D+I  +               L QL
Sbjct: 247 PELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQL 306

Query: 184 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
           L EMDG +    + +I ATNR DI+DPALLRPGR D+ I IPLPD + R++IFK   R  
Sbjct: 307 LAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDM 366

Query: 364 PLAKDIDLSALAKYTQG 414
            LA+D+DL  LAK T+G
Sbjct: 367 NLAEDVDLQKLAKITEG 383



 Score = 25.0 bits (53), Expect(2) = 5e-30
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIREN 478
           +SGADI  IC  A   AIRE+
Sbjct: 384 ASGADIKAICTEAGMMAIRED 404

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score =  128 bits (322), Expect = 7e-30
 Identities = 63/134 (47%), Positives = 84/134 (62%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G ELL  + GESE  +R +F +AR  APCV+FFDE+D++ T                LNQ
Sbjct: 595 GAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERL---LNQ 651

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            L E+DG   ++ V++IGATNRPD++DPA LRPGR   L+Y+PLP+ D R  I KA  RK
Sbjct: 652 FLVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARK 710

Query: 361 SPLAKDIDLSALAK 402
            P+   +DL  +AK
Sbjct: 711 KPIDPSVDLDGIAK 724



 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E+++   G SE N+RE+F KA  +AP ++F DE+D+I ++               + QLL
Sbjct: 302 EVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRI---VTQLL 358

Query: 187 TEMDGMNAKKT----------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
           T MDG   K            V +IGATNRPD +DPAL R GR +  I +  PD D+R +
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAE 418

Query: 337 IFKACLRKSPLAKDIDLSALAKYTQGF 417
           I     +K  L    D   +A+ T GF
Sbjct: 419 ILSVVAQKLRLEGPFDKKRIARLTPGF 445

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score =  122 bits (306), Expect(2) = 1e-29
 Identities = 61/138 (44%), Positives = 84/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VRE+F  A+  AP ++F DELD+IA +               + Q
Sbjct: 208 GSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQ 267

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL E+DG + +  V +IGATNR DI+DPA+LRPGR D++I +PLP  + R QIFK   RK
Sbjct: 268 LLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRK 327

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA+D+D   LA+ T+G
Sbjct: 328 MKLAEDVDFKELARITEG 345



 Score = 26.6 bits (57), Expect(2) = 1e-29
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRENIEK 487
           +SGADI  IC  A  +AIRE   K
Sbjct: 346 ASGADIKAICTEAGMFAIREERAK 369

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score =  127 bits (319), Expect = 2e-29
 Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +               ++Q
Sbjct: 905  GPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 963

Query: 181  LLTEMDGMNAKKT-----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH-QIF 342
            LL E+DGM+         VF++GATNRPD++D ALLRPGR D+++Y+ + D D +  +I 
Sbjct: 964  LLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKIL 1023

Query: 343  KACLRKSPLAKDIDLSALAK 402
            +A  RK  LA ++DL  +AK
Sbjct: 1024 EALTRKFKLADNVDLYEIAK 1043

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score =  127 bits (319), Expect = 2e-29
 Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +               ++Q
Sbjct: 768  GPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 826

Query: 181  LLTEMDGMNA-KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH-QIFKACL 354
            LL E+DGM++    VF+IGATNRPD++D ALLRPGR D+++Y+ + D D +   I KA  
Sbjct: 827  LLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALT 886

Query: 355  RKSPLAKDIDLSALAK 402
            RK  L   ID+  +AK
Sbjct: 887  RKFTLESGIDILDIAK 902

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score =  127 bits (319), Expect = 2e-29
 Identities = 65/139 (46%), Positives = 87/139 (62%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+LL+ W GESE  +R+ F KAR  AP V+FFDELDS+A                 +NQ
Sbjct: 529 GPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAP--GRGQTGGNNVSERVVNQ 586

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTE+DG+   + V +I ATNRPDIIDPAL+R GR D+L+ +  P ++ R QI K   + 
Sbjct: 587 LLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQD 646

Query: 361 SPLAKDIDLSALAKYTQGF 417
           +PLA D+ L  LA+   G+
Sbjct: 647 TPLAADVSLRELAERADGY 665



 Score =  116 bits (291), Expect = 3e-26
 Identities = 62/139 (44%), Positives = 84/139 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+++ ++GESE  +REIF+ A+  +P ++F DELDSIA +                 Q
Sbjct: 256 GPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVVA---Q 312

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLT MDG+  +  V +I ATNR D +DPAL RPGR D+ I I +PD   R +I K   R 
Sbjct: 313 LLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRG 372

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL+ D++LS LA  T GF
Sbjct: 373 MPLSDDVNLSTLADDTHGF 391

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score =  126 bits (316), Expect = 4e-29
 Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G + + M+ G   A VR++F+ A+  APC++F DE+D++   +               LN
Sbjct: 221 GSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLN 280

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           QLL EMDG +    + +I ATNRPDI+DPALLRPGR D+ I+IP PDV  R++I K   R
Sbjct: 281 QLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHAR 340

Query: 358 KSPLAKDIDLSALAKYTQGF 417
              LAKD+DL  +A+ T GF
Sbjct: 341 NKKLAKDVDLEFVARATPGF 360

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score =  125 bits (315), Expect = 5e-29
 Identities = 64/139 (46%), Positives = 88/139 (63%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL+ + G SE  VR+IF +A+ + PC+LFFDE +SIA +               +NQ
Sbjct: 907  GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQ 963

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            LLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD  SR +I       
Sbjct: 964  LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 1023

Query: 361  SPLAKDIDLSALAKYTQGF 417
             PLA D+DL  +A  T  F
Sbjct: 1024 LPLADDVDLQHVASVTDSF 1042

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score =  124 bits (312), Expect = 1e-28
 Identities = 66/137 (48%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F+KAR S+PCV+FFDELDSIA                 ++Q
Sbjct: 721  GPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPH-RGNSSDSGNVMDRVVSQ 779

Query: 181  LLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PDVDSRHQIFKAC 351
            LL E+D ++    K VF+IGATNRPD++DP+LLRPGR D+L+Y+ +    +S+  + +A 
Sbjct: 780  LLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRAL 839

Query: 352  LRKSPLAKDIDLSALAK 402
             +   L + IDL+ +AK
Sbjct: 840  TKTFKLDETIDLNEIAK 856

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score =  124 bits (311), Expect = 1e-28
 Identities = 63/138 (45%), Positives = 87/138 (63%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE  + V++IF  A+  AP ++F DE+D+IA +               L Q
Sbjct: 237 GSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQ 296

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG +A+  V IIGATNRPDI+DPA+LRPGR D++I +P PD   R +I K   RK
Sbjct: 297 LLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRK 356

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA+D++L  +AK T+G
Sbjct: 357 MNLAEDVNLEEIAKMTEG 374

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  124 bits (310), Expect = 2e-28
 Identities = 57/139 (41%), Positives = 86/139 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 217 GSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 276

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG +    V +I ATNRPD++DPAL RPGR D+ + + LPDV  R QI K  +RK
Sbjct: 277 MLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRK 336

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +A+D+D   LA+ T G+
Sbjct: 337 VSVAQDVDAMTLARGTPGY 355

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  123 bits (308), Expect = 3e-28
 Identities = 58/139 (41%), Positives = 84/139 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ A+ +APC++F DE+D++  Q               LNQ
Sbjct: 232 GSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 291

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG +A + + II ATNR DI+DPALLRPGR D+ I +  PDV+ R ++ K   R 
Sbjct: 292 LLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARN 351

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL  D++L  +A  T GF
Sbjct: 352 KPLNDDVNLKTIATRTPGF 370

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score =  122 bits (307), Expect = 4e-28
 Identities = 64/138 (46%), Positives = 91/138 (65%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +               ++Q
Sbjct: 879  GPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 937

Query: 181  LLTEMDGMNAKK---TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDV-DSRHQIFKA 348
            LL E+DGM+  +    VF++GATNRPD++D ALLRPGR D+++Y+ + D  + + +I +A
Sbjct: 938  LLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQA 997

Query: 349  CLRKSPLAKDIDLSALAK 402
              RK  L   +DL  +A+
Sbjct: 998  LTRKFQLDPSVDLGRIAE 1015

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score =  122 bits (307), Expect = 4e-28
 Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F KAR + PCV+FFDE+DS+A +               ++Q
Sbjct: 784  GPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPK-RGNQGDSGGVMDRIVSQ 842

Query: 181  LLTEMDGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDV-DSRHQIFKACL 354
            LL E+DGM++    VFIIGATNRPD++D ALLRPGR D+LIY+ + D  + +  I +A  
Sbjct: 843  LLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALT 902

Query: 355  RKSPLAKDIDLSAL 396
            RK  ++ DI+   L
Sbjct: 903  RKFKVSSDINFDEL 916

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score =  122 bits (305), Expect = 7e-28
 Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +               ++Q
Sbjct: 1060 GPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 1118

Query: 181  LLTEMDGM----NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDV-DSRHQIFK 345
            LL E+DGM    +    VF+IGATNRPD++DPALLRPGR D+++Y+ + D  D + +I +
Sbjct: 1119 LLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILE 1178

Query: 346  ACLRKSPLAKDIDLSALAK 402
            A  RK  L   + L ++A+
Sbjct: 1179 ALTRKFTLHPSVSLHSVAQ 1197

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  121 bits (304), Expect = 9e-28
 Identities = 54/139 (38%), Positives = 86/139 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ +R  APC++F DE+D++  Q               LNQ
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG +  + + +I ATNRPD++DPALLRPGR D+ I++ LPD+  R +I +  ++K
Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKK 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL  ++D   +A+ T GF
Sbjct: 338 VPLGNNVDPMIIARGTPGF 356

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score =  121 bits (303), Expect = 1e-27
 Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A                 ++Q
Sbjct: 771  GPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQ 829

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI-PLPDVDSRHQIFKACLR 357
            LL E+DG+++ + VF+IGATNRPD++DPALLRPGR D+L+++    D  S+ ++  A  R
Sbjct: 830  LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITR 889

Query: 358  KSPLAKDIDLS 390
            K  L   + L+
Sbjct: 890  KFKLEASVSLA 900

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score =  121 bits (303), Expect = 1e-27
 Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +               ++Q
Sbjct: 1057 GPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 1115

Query: 181  LLTEMDGMNAKK----TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDV-DSRHQIFK 345
            LL E+DGM+  +     VF+IGATNRPD++DPALLRPGR D+++Y+ + D  D +  I +
Sbjct: 1116 LLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIME 1175

Query: 346  ACLRKSPLAKDIDLSALAK 402
            A  RK  L   + L ++A+
Sbjct: 1176 ALTRKFTLHPTVSLRSVAE 1194

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score =  121 bits (303), Expect = 1e-27
 Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +               ++Q
Sbjct: 1096 GPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 1154

Query: 181  LLTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH-QIFK 345
            LL E+DGMN  +     VF+IGATNRPD++D ALLRPGR D+++Y+ + D   +   I +
Sbjct: 1155 LLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILE 1214

Query: 346  ACLRKSPLAKDIDLSALAK 402
            A  RK  L  D+ L  +A+
Sbjct: 1215 ALTRKFALHPDVSLDRVAE 1233

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score =  120 bits (302), Expect = 2e-27
 Identities = 59/139 (42%), Positives = 88/139 (63%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPE+L  + G SE +VRE+F++A+ + PC+LFFDE DSIA +               +NQ
Sbjct: 866  GPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRV---VNQ 922

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            +LT+MDG      V+++ AT+RPD+ID ALLRPGRLD+ +   +PD D R  I ++  R 
Sbjct: 923  MLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRN 982

Query: 361  SPLAKDIDLSALAKYTQGF 417
              ++K ++LS++A    GF
Sbjct: 983  MNVSKSVNLSSVAGECSGF 1001

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score =  120 bits (302), Expect = 2e-27
 Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A                 ++Q
Sbjct: 770  GPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQ 828

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PDVDSRHQIFKACLR 357
            LL E+DG+++ + VF+IGATNRPD++DPALLRPGR D+L+++    D  S+ ++  A  R
Sbjct: 829  LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITR 888

Query: 358  KSPLAKDIDL 387
            K  L   + L
Sbjct: 889  KFKLEPSVSL 898

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score =  120 bits (302), Expect = 2e-27
 Identities = 64/135 (47%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +               ++Q
Sbjct: 789  GPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQ 847

Query: 181  LLTEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH-QIFKACL 354
            LL E+DG++     +F+IGATNRPD++D ALLRPGR D+L+Y+ + D + +   I +A  
Sbjct: 848  LLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALT 907

Query: 355  RKSPLAKDIDLSALA 399
            RK  L  D+ L  LA
Sbjct: 908  RKFTLDPDVSLDDLA 922

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score =  120 bits (302), Expect = 2e-27
 Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A                 ++Q
Sbjct: 768  GPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQ 826

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI-PLPDVDSRHQIFKACLR 357
            LL E+DG+++ + VF+IGATNRPD++DPALLRPGR D+L+++    D  S+ ++  A  R
Sbjct: 827  LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITR 886

Query: 358  KSPLAKDIDL 387
            K  L   + L
Sbjct: 887  KFKLEASVSL 896

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score =  118 bits (295), Expect(2) = 4e-27
 Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GPE+   + GESE  +REIF KAR +AP ++FFDE+D+++                 L  
Sbjct: 583 GPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTS 639

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL E+DG+   K V I+ ATNRPD ID ALLRPGRLD+ IY+  PDV++R +I K C +K
Sbjct: 640 LLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKK 699

Query: 361 -SPLAKDIDLSALAKYTQGF 417
            +     +DL  LA  T+G+
Sbjct: 700 FNTEESGVDLHELADRTEGY 719



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 51/113 (45%), Positives = 69/113 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP +++ + GE+EA +R+IF++AR   P ++F DE+DSIA                    
Sbjct: 312 GPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT-- 369

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQI 339
           LLT MDGM A   V +I ATNRP+ +DPAL RPGR DQ + I +PDVD+R  I
Sbjct: 370 LLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422



 Score = 22.3 bits (46), Expect(2) = 4e-27
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGA++  +CQ A   AI E+++
Sbjct: 720 SGAEVVLLCQEAGLAAIMEDLD 741

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score =  119 bits (298), Expect = 4e-27
 Identities = 62/139 (44%), Positives = 85/139 (61%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VREIF  AR  AP +LF DE+D+IA++               + Q
Sbjct: 206 GSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQ 265

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL E+DG +    V +I ATNR D+IDPA+LRPGR D++I +PLP +  R +I     RK
Sbjct: 266 LLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRK 325

Query: 361 SPLAKDIDLSALAKYTQGF 417
           + +A D+DL A+AK T+GF
Sbjct: 326 AKMAPDVDLEAIAKLTEGF 344

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score =  119 bits (298), Expect = 4e-27
 Identities = 63/138 (45%), Positives = 91/138 (65%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPELL M+ GESEANVR++F +AR + PCV+FFDELDS+A +               ++Q
Sbjct: 885  GPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPK-RGNQGDSEGVMDRIVSQ 943

Query: 181  LLTEMDGM---NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDV-DSRHQIFKA 348
            LL E+DGM   +    VF++GATNRPD++D ALLRPGR D+++Y+ + D  + + +I +A
Sbjct: 944  LLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEA 1003

Query: 349  CLRKSPLAKDIDLSALAK 402
              RK  L   +DL  +A+
Sbjct: 1004 LSRKFHLHPSVDLDKVAE 1021

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score =  119 bits (298), Expect = 4e-27
 Identities = 61/139 (43%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   A VR++F KA  +APC++F DE+D++  +               LNQ
Sbjct: 252 GSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQ 311

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG    K V ++GATNR DI+D ALLRPGR D+ + + LPD   R  I K   R 
Sbjct: 312 LLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARN 371

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL +D+ L  LA  T GF
Sbjct: 372 KPLGEDVSLVQLANRTPGF 390

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score =  118 bits (296), Expect(2) = 5e-27
 Identities = 66/143 (46%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E L M+ G   A VR++F  AR +APC+LF DE+D++  +               LNQ
Sbjct: 373 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 432

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR- 357
           LL EMDG N    V I+  TNRPDI+DPALLRPGR D+ I+I  PD+  R  IFK  LR 
Sbjct: 433 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492

Query: 358 ---KSPLAKDIDLSALAKYTQGF 417
               S L KD     LA  T GF
Sbjct: 493 LKLDSALEKDKLARKLASLTPGF 515



 Score = 21.6 bits (44), Expect(2) = 5e-27
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           SGAD+  +C  A   A R
Sbjct: 516 SGADVANVCNEAALIAAR 533

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score =  118 bits (296), Expect(2) = 5e-27
 Identities = 66/143 (46%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E L M+ G   A VR++F  AR +APC+LF DE+D++  +               LNQ
Sbjct: 374 GSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQ 433

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR- 357
           LL EMDG N    V I+  TNRPDI+DPALLRPGR D+ I+I  PD+  R  IFK  LR 
Sbjct: 434 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 493

Query: 358 ---KSPLAKDIDLSALAKYTQGF 417
               S L KD     LA  T GF
Sbjct: 494 LKLDSTLEKDKLARKLASLTPGF 516



 Score = 21.6 bits (44), Expect(2) = 5e-27
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           SGAD+  +C  A   A R
Sbjct: 517 SGADVANVCNEAALIAAR 534

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  119 bits (297), Expect = 6e-27
 Identities = 54/139 (38%), Positives = 82/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F++A+ +APC++F DE+D++  Q               LNQ
Sbjct: 227 GSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQ 286

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      + I+ ATNRPD++D AL+RPGR D+ + +  PD   R +I     R 
Sbjct: 287 LLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARG 346

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L++D+DL  +A+ T GF
Sbjct: 347 KTLSQDVDLDKIARRTPGF 365

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  117 bits (294), Expect(2) = 6e-27
 Identities = 61/138 (44%), Positives = 84/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    V E+F+ A+  AP ++F DE+D+I  +               L Q
Sbjct: 207 GSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQ 266

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +  V +I ATNRPDI+DPALLRPGR D+LI +PLPD + R +I K   R+
Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 326

Query: 361 SPLAKDIDLSALAKYTQG 414
             L K +DL A+A+ T+G
Sbjct: 327 MKL-KGVDLRAIAEMTEG 343



 Score = 21.9 bits (45), Expect(2) = 6e-27
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGAD+  I   A  +AIRE
Sbjct: 344 ASGADLKAIATEAGMFAIRE 363

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  118 bits (296), Expect = 8e-27
 Identities = 55/137 (40%), Positives = 82/137 (59%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E + ++ G   + VR++F+KA+  APC++F DE+D++  Q               +NQLL
Sbjct: 321 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLL 380

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           TEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PDV  R +I +   R   
Sbjct: 381 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKA 440

Query: 367 LAKDIDLSALAKYTQGF 417
           LAKD+D   +A+ T GF
Sbjct: 441 LAKDVDFDKIARRTPGF 457

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  118 bits (296), Expect = 8e-27
 Identities = 55/137 (40%), Positives = 81/137 (59%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E + ++ G   + VR++F+KA+  APC++F DE+D++  Q               +NQLL
Sbjct: 318 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLL 377

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           TEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PDV  R QI K   R   
Sbjct: 378 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKA 437

Query: 367 LAKDIDLSALAKYTQGF 417
           + KD+D   +A+ T GF
Sbjct: 438 IGKDVDYEKVARRTPGF 454

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score =  118 bits (295), Expect = 1e-26
 Identities = 57/138 (41%), Positives = 82/138 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++FD+A+ ++PC++F DE+D++  Q               LNQ
Sbjct: 229 GSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQ 288

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG   +  V +I ATNRPDI+DPALLRPGR D+ I +  PD+  R  + +   + 
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348

Query: 361 SPLAKDIDLSALAKYTQG 414
            P+A D DL  LAK T G
Sbjct: 349 KPIADDADLDGLAKRTVG 366

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  118 bits (295), Expect(2) = 1e-26
 Identities = 57/139 (41%), Positives = 83/139 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ A+ +APC++F DE+D++  Q               LNQ
Sbjct: 227 GSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 286

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG +A + + II ATNR DI+DPALLRPGR D+ I +  PDV  R  + K   R 
Sbjct: 287 LLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARN 346

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PL + ++L ++A  T GF
Sbjct: 347 KPLDETVNLKSIAMRTPGF 365



 Score = 20.8 bits (42), Expect(2) = 1e-26
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEK 487
           SGAD+  +   A   A R+N +K
Sbjct: 366 SGADLENLLNEAALVAARQNKKK 388

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  117 bits (292), Expect(2) = 1e-26
 Identities = 60/138 (43%), Positives = 84/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    V E+F+ A+  AP ++F DE+D+I  +               L Q
Sbjct: 207 GSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQ 266

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +  V +I ATNRPDI+DPALLRPGR D+LI +PLPD + R +I K   R+
Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 326

Query: 361 SPLAKDIDLSALAKYTQG 414
             L K++DL  +A+ T+G
Sbjct: 327 MKL-KNVDLRVIAEITEG 343



 Score = 21.9 bits (45), Expect(2) = 1e-26
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGAD+  I   A  +AIRE
Sbjct: 344 ASGADLKAIATEAGMFAIRE 363

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  117 bits (293), Expect = 2e-26
 Identities = 55/139 (39%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR +F+ A+ +AP ++F DE+D++  Q               LNQ
Sbjct: 253 GSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQ 312

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG    + + +I ATNR D++DPALLRPGR D+ + +  PDV  R  I K   + 
Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA+D+DL  +A+ T GF
Sbjct: 373 KPLAEDVDLKLVAQQTPGF 391

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  117 bits (293), Expect = 2e-26
 Identities = 55/139 (39%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR +F+ A+ +AP ++F DE+D++  Q               LNQ
Sbjct: 253 GSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQ 312

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG    + + +I ATNR D++DPALLRPGR D+ + +  PDV  R  I K   + 
Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372

Query: 361 SPLAKDIDLSALAKYTQGF 417
            PLA+D+DL  +A+ T GF
Sbjct: 373 KPLAEDVDLKLVAQQTPGF 391

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score =  117 bits (292), Expect(2) = 2e-26
 Identities = 64/143 (44%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E L M+ G   A VR++F  AR  APC+LF DE+D+I  +               LNQ
Sbjct: 240 GSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQ 299

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR- 357
           +L EMDG N+   V ++  TNRPDI+DPAL RPGR D+ IYI  PD+  R  IFK  LR 
Sbjct: 300 MLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRP 359

Query: 358 ---KSPLAKDIDLSALAKYTQGF 417
                 L+KD     LA  T GF
Sbjct: 360 LKLDGSLSKDALSRKLAALTPGF 382



 Score = 21.2 bits (43), Expect(2) = 2e-26
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           +GADI+ +C  A   A R
Sbjct: 383 TGADISNVCNEAALIAAR 400

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  117 bits (292), Expect = 2e-26
 Identities = 54/139 (38%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+ +APC++F DE+D++  Q               LNQ
Sbjct: 238 GSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQ 297

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      + II ATNRPD++D AL+RPGR D+ + +  PD   R +I +   R 
Sbjct: 298 LLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARN 357

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA ++ + ++A+ T GF
Sbjct: 358 KKLAPEVSIDSIARRTPGF 376

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  116 bits (291), Expect = 3e-26
 Identities = 54/137 (39%), Positives = 81/137 (59%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E + ++ G   + VR++F+KA+  APC++F DE+D++  Q               +NQLL
Sbjct: 330 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLL 389

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           TEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PDV  R +I +   R   
Sbjct: 390 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKA 449

Query: 367 LAKDIDLSALAKYTQGF 417
           L KD+D   +A+ T GF
Sbjct: 450 LGKDVDFDKVARRTPGF 466

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  116 bits (291), Expect = 3e-26
 Identities = 56/138 (40%), Positives = 82/138 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ ++PC++F DE+D++  Q               LNQ
Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQ 288

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG   +  V +I ATNRPDI+DPALLRPGR D+ I +  PD+  R  + +   + 
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348

Query: 361 SPLAKDIDLSALAKYTQG 414
            P+A D DL  LAK T G
Sbjct: 349 KPMAADADLDGLAKRTVG 366

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  116 bits (291), Expect = 3e-26
 Identities = 56/138 (40%), Positives = 82/138 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++A+ ++PC++F DE+D++  Q               LNQ
Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQ 288

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG   +  V +I ATNRPDI+DPALLRPGR D+ I +  PD+  R  + +   + 
Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348

Query: 361 SPLAKDIDLSALAKYTQG 414
            P+A D DL  LAK T G
Sbjct: 349 KPMAADADLDGLAKRTVG 366

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  115 bits (289), Expect = 5e-26
 Identities = 53/137 (38%), Positives = 81/137 (59%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E + ++ G   + VR++F+KA+  APC++F DE+D++  Q               +NQLL
Sbjct: 321 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLL 380

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           TEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PDV  R +I +   R   
Sbjct: 381 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKA 440

Query: 367 LAKDIDLSALAKYTQGF 417
           L KD+D   +A+ T G+
Sbjct: 441 LTKDVDFEKIARRTPGY 457

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score =  112 bits (280), Expect(2) = 5e-26
 Identities = 54/136 (39%), Positives = 80/136 (58%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E +  + GE    VR +F+ A+  +P ++F DE+D++A +               L QLL
Sbjct: 220 EFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLL 279

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
            E+DG  ++  V I+ ATNRPDI+DPALLRPGR D+ I +PLP+ D R +I K       
Sbjct: 280 AELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMA 339

Query: 367 LAKDIDLSALAKYTQG 414
           LA+++D+  LA+ T G
Sbjct: 340 LAEEVDIELLARITDG 355



 Score = 24.3 bits (51), Expect(2) = 5e-26
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGAD+  IC  A  +AIR+
Sbjct: 356 ASGADLKAICTEAGMFAIRD 375

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score =  115 bits (289), Expect(2) = 5e-26
 Identities = 61/138 (44%), Positives = 82/138 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    V E+F+ A+  AP ++F DE+D+I  +               L Q
Sbjct: 205 GSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQ 264

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +  V +I ATNRPDI+DPALLRPGR D+LI +PLPD   R +I K   RK
Sbjct: 265 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRK 324

Query: 361 SPLAKDIDLSALAKYTQG 414
             L K +DL  +A+ T+G
Sbjct: 325 MNL-KGVDLRVIAEITEG 341



 Score = 20.8 bits (42), Expect(2) = 5e-26
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGAD+  I   A  +AIR+
Sbjct: 342 ASGADLKAIATEAGMFAIRD 361

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score =  114 bits (286), Expect(2) = 5e-26
 Identities = 59/138 (42%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    V E+F+ A+  AP ++F DE+D+I  +               L Q
Sbjct: 204 GSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQ 263

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG + +  V +I ATNRPDI+DPALLRPGR D+LI +PLPD + R +I K   R+
Sbjct: 264 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 323

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + +DL  +A+ T+G
Sbjct: 324 MKL-RGVDLRLIAELTEG 340



 Score = 21.9 bits (45), Expect(2) = 5e-26
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGAD+  I   A  +AIRE
Sbjct: 341 ASGADLKAIATEAGMFAIRE 360

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score =  112 bits (280), Expect(2) = 7e-26
 Identities = 58/137 (42%), Positives = 83/137 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VR++F  A+  +PC++F DE+D++A++               L Q
Sbjct: 215 GSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQ 274

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG +++  V II ATNRPDI+DPA+LRPGR D++I I +PD D R +I K    K
Sbjct: 275 LLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEK 334

Query: 361 SPLAKDIDLSALAKYTQ 411
             L K +DL  +AK  +
Sbjct: 335 MNL-KGVDLREVAKIAE 350



 Score = 23.9 bits (50), Expect(2) = 7e-26
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 GADITEICQRACKYAIRENIE 484
           GAD+  +C  A  +AIRE  E
Sbjct: 354 GADLKAVCTEAGMFAIREERE 374

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score =  115 bits (287), Expect = 8e-26
 Identities = 58/139 (41%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+ +APC++F DE+D++  Q               LNQ
Sbjct: 220 GSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQ 279

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      V +I ATNR D++D ALLRPGR D+ I + +PDV SR  I K    +
Sbjct: 280 LLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQ 339

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L   + L A+A+ T GF
Sbjct: 340 KKLHPQVSLEAVARRTAGF 358

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score =  115 bits (287), Expect = 8e-26
 Identities = 56/139 (40%), Positives = 82/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+  APC++F DE+D++  Q               LNQ
Sbjct: 237 GSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQ 296

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG +    V ++ ATNR D++D ALLRPGR D+ I + LP+++ R  I K   +K
Sbjct: 297 LLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKK 356

Query: 361 SPLAKDIDLSALAKYTQGF 417
             + KD+ L  +A+ T GF
Sbjct: 357 KKIHKDVLLEVIARRTPGF 375

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  114 bits (286), Expect = 1e-25
 Identities = 53/137 (38%), Positives = 80/137 (58%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E + ++ G   + VR +F+ A+  APC++F DE+D++  Q               +NQLL
Sbjct: 298 EFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLL 357

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           TEMDG +    V ++ ATNRPD++D ALLRPG+ D+ + +  PDV  R +I +   R   
Sbjct: 358 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKA 417

Query: 367 LAKDIDLSALAKYTQGF 417
           LAKD+D   +A+ T GF
Sbjct: 418 LAKDVDFDKIARRTPGF 434

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score =  114 bits (286), Expect = 1e-25
 Identities = 55/139 (39%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+ +APC++F DE+D++  Q               LNQ
Sbjct: 277 GSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQ 336

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      + +I ATNRPD++D ALLRPGR D+ + +  PDV  R  I     + 
Sbjct: 337 LLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQN 396

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L +++ L+A+A+ T GF
Sbjct: 397 KKLHEEVQLAAIARRTPGF 415

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score =  110 bits (276), Expect(2) = 1e-25
 Identities = 57/137 (41%), Positives = 80/137 (58%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E    + GE    VRE+F+ A+  AP ++F DE+D+I  +               L QLL
Sbjct: 203 EFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLL 262

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
            E+DG +    V II ATNR DI+DPALLRPGR D++I +PLPD   R +IF   L+K  
Sbjct: 263 AELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMK 322

Query: 367 LAKDIDLSALAKYTQGF 417
           +  +I+L  L++ T+GF
Sbjct: 323 IEDNINLELLSQLTEGF 339



 Score = 24.3 bits (51), Expect(2) = 1e-25
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEK 487
           SGADI  +C  A   AIR+   K
Sbjct: 340 SGADIKNVCVEAAYMAIRDGRNK 362

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score =  113 bits (283), Expect = 2e-25
 Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
 Frame = +1

Query: 1    GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
            GPE+L  + G SE N+RE+F++A+   PC+LFFDE DSIA +               +NQ
Sbjct: 764  GPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRV---VNQ 820

Query: 181  LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL-- 354
            LLT+MDG      V+I+ AT+RPD+ID ALLRPGRLD+ +   +P    R  I +A +  
Sbjct: 821  LLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNS 880

Query: 355  -------RKSPLAKDIDLSALAKYTQGF 417
                   +K  L K+ DL  +A+ T GF
Sbjct: 881  KDKDTGQKKFALEKNADLKLIAEKTAGF 908

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score =  112 bits (280), Expect = 5e-25
 Identities = 56/139 (40%), Positives = 78/139 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+ ++PC++F DE+D++  Q               LNQ
Sbjct: 239 GSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQ 298

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      + II ATNR D++D ALLRPGR D+ + + +PDV  R +I     R 
Sbjct: 299 LLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARN 358

Query: 361 SPLAKDIDLSALAKYTQGF 417
             L   I L  +AK T GF
Sbjct: 359 KKLDLSISLELIAKRTPGF 377

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 99.0 bits (245), Expect(2) = 7e-25
 Identities = 50/129 (38%), Positives = 73/129 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ ++P ++F DE+D+IAT+               L +
Sbjct: 228 GSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLE 287

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  +F     +
Sbjct: 288 LLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSR 347

Query: 361 SPLAKDIDL 387
             L+ D+DL
Sbjct: 348 MNLSDDVDL 356



 Score = 33.9 bits (76), Expect(2) = 7e-25
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 395 WPSTPKDSSGADITEICQRACKYAIREN 478
           W + P   SGADI  ICQ A   A+REN
Sbjct: 359 WVARPDKISGADINSICQEAGMQAVREN 386

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  111 bits (277), Expect = 1e-24
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F+ A+ +AP ++F DE+D++  Q               LNQ
Sbjct: 259 GSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQ 318

Query: 181 LLTEMDGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           LL EMDG      +V +I ATNR D++DPALLRPGR D+ + +  PDV  R  + K   +
Sbjct: 319 LLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAK 378

Query: 358 KSPLAKDIDLSALAKYTQGF 417
             PLA D+DL  +A  T G+
Sbjct: 379 NKPLASDVDLHNVATQTPGY 398

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score =  110 bits (276), Expect = 2e-24
 Identities = 54/133 (40%), Positives = 78/133 (58%)
 Frame = +1

Query: 19  MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 198
           ++ G     VRE+F +AR  AP ++F DELD++                  LNQ+L EMD
Sbjct: 284 LYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMD 343

Query: 199 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD 378
           G+N    + I+GATNR D++DPALLRPGR D++I + LPD+  R +I K   +   L+K+
Sbjct: 344 GINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKE 403

Query: 379 IDLSALAKYTQGF 417
           I    +AK T G+
Sbjct: 404 IKFDKIAKRTPGY 416

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  110 bits (276), Expect = 2e-24
 Identities = 57/141 (40%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G E + ++ G   A VR++F++A+  APC++F DELD+I  ++               LN
Sbjct: 240 GSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDEREQTLN 299

Query: 178 QLLTEMDGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           QLLTEMDG +A   TV ++ ATNRP+ +DPALLRPGR D+ + +  PD+  R +I +   
Sbjct: 300 QLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYA 359

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           +K  L K+++L  +A  T GF
Sbjct: 360 KKIKLDKEVELKNIATRTPGF 380

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score =  102 bits (254), Expect(2) = 2e-24
 Identities = 52/129 (40%), Positives = 73/129 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ +AP ++F DE+D+IAT                L +
Sbjct: 227 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME 286

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  +F+ C  K
Sbjct: 287 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAK 346

Query: 361 SPLAKDIDL 387
             L  ++DL
Sbjct: 347 MNLGDEVDL 355



 Score = 28.9 bits (63), Expect(2) = 2e-24
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 401 STPKDSSGADITEICQRACKYAIREN 478
           S P   S A+IT ICQ A  +A+R+N
Sbjct: 360 SRPDKISAAEITAICQEAGMHAVRKN 385

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score =  100 bits (250), Expect(2) = 3e-24
 Identities = 52/129 (40%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  AR ++P ++F DE+D+IAT+               L +
Sbjct: 217 GSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILME 276

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF+    K
Sbjct: 277 LLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSK 336

Query: 361 SPLAKDIDL 387
             L+ ++DL
Sbjct: 337 MNLSDEVDL 345



 Score = 29.6 bits (65), Expect(2) = 3e-24
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 401 STPKDSSGADITEICQRACKYAIREN 478
           S P   SGA+I  ICQ A  +AIR+N
Sbjct: 350 SRPDKLSGAEIQSICQEAGMHAIRKN 375

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score =  108 bits (271), Expect(2) = 5e-24
 Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXL-NQL 183
           EL +M+ GE EA +R  F +AR ++P ++FFDE D +A +               L + L
Sbjct: 355 ELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTL 414

Query: 184 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
           LTEMDG+   K + ++ ATNRP  ID AL+RPGR D ++Y+P PD+++R +I +   R  
Sbjct: 415 LTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM 474

Query: 364 PLAKDIDLSALAKYTQGF 417
            L  D+DL  +A+ T  F
Sbjct: 475 TLGDDVDLRKIAEETDLF 492



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 195
           GESE  +RE F +A   A    P V+F DE+D +  +                +QL T M
Sbjct: 98  GESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIA----SQLFTLM 153

Query: 196 DGMNAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
           D      +   V ++ +TNR D IDPAL R GR D L+ +  P+ + R +I +   +K  
Sbjct: 154 DSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVN 213

Query: 367 LAKDIDLSALAKYTQGF 417
           L   +DL A+A    G+
Sbjct: 214 LDPSVDLQAIAISCNGY 230



 Score = 21.2 bits (43), Expect(2) = 5e-24
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           +GA++  +C+ +   ++RENI
Sbjct: 493 TGAELEGLCRESGTVSLRENI 513

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score =  100 bits (250), Expect(2) = 5e-24
 Identities = 52/129 (40%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ +AP ++F DE+D+IAT+               L +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351

Query: 361 SPLAKDIDL 387
             L++++DL
Sbjct: 352 MNLSEEVDL 360



 Score = 29.3 bits (64), Expect(2) = 5e-24
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIREN 478
           P   SGADI  ICQ +   A+REN
Sbjct: 367 PDKISGADINSICQESGMLAVREN 390

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score =  100 bits (250), Expect(2) = 5e-24
 Identities = 52/129 (40%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ +AP ++F DE+D+IAT+               L +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351

Query: 361 SPLAKDIDL 387
             L++++DL
Sbjct: 352 MNLSEEVDL 360



 Score = 29.3 bits (64), Expect(2) = 5e-24
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIREN 478
           P   SGADI  ICQ +   A+REN
Sbjct: 367 PDKISGADINSICQESGMLAVREN 390

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  109 bits (272), Expect = 5e-24
 Identities = 53/139 (38%), Positives = 77/139 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E + M+ G   + VR++F KA+ +APC++F DE+D++  Q               LNQ
Sbjct: 239 GSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQ 298

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LLTEMDG      V +I ATNR DI+D ALLRPGR D+ + + +PD   R  I +   + 
Sbjct: 299 LLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKN 358

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +   + L  +A+ T GF
Sbjct: 359 KKMESKVSLETIARRTPGF 377

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score =  103 bits (257), Expect(2) = 6e-24
 Identities = 52/134 (38%), Positives = 77/134 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR    C++FFDE+D+I                  + +
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           ++ ++DG +A+  + ++ ATNRPD +DPALLRPGRLD+ +   LPD++SR QIFK   R 
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354

Query: 361 SPLAKDIDLSALAK 402
               +DI    LA+
Sbjct: 355 MNCERDIRFELLAR 368



 Score = 26.2 bits (56), Expect(2) = 6e-24
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GADI  +C  A  YAIR
Sbjct: 372 NSTGADIRSVCTEAGMYAIR 391

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score =  103 bits (257), Expect(2) = 6e-24
 Identities = 52/134 (38%), Positives = 77/134 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR    C++FFDE+D+I                  + +
Sbjct: 234 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 293

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           ++ ++DG +A+  + ++ ATNRPD +DPALLRPGRLD+ +   LPD++SR QIFK   R 
Sbjct: 294 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 353

Query: 361 SPLAKDIDLSALAK 402
               +DI    LA+
Sbjct: 354 MNCERDIRFELLAR 367



 Score = 26.2 bits (56), Expect(2) = 6e-24
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GADI  +C  A  YAIR
Sbjct: 371 NSTGADIRSVCTEAGMYAIR 390

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score =  102 bits (255), Expect(2) = 6e-24
 Identities = 52/129 (40%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ +AP ++F DE+D+IAT                L +
Sbjct: 222 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME 281

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  +F+ C  K
Sbjct: 282 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSK 341

Query: 361 SPLAKDIDL 387
             L+ ++DL
Sbjct: 342 MNLSDEVDL 350



 Score = 26.9 bits (58), Expect(2) = 6e-24
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 401 STPKDSSGADITEICQRACKYAIREN 478
           S P   S A+I  ICQ A  +A+R+N
Sbjct: 355 SRPDKISAAEIAAICQEAGMHAVRKN 380

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  108 bits (271), Expect = 6e-24
 Identities = 53/139 (38%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++ + +APC++F DE+D++                  LNQ
Sbjct: 221 GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQ 280

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG  A + V II ATNRPD++D ALLRPGR D+ I +  PD++ R QI K  L+K
Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKK 340

Query: 361 SPLAKDIDLSALAKYTQGF 417
                 +    +A+ T GF
Sbjct: 341 IKYNSTVLARIIARGTPGF 359

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  108 bits (271), Expect = 6e-24
 Identities = 53/139 (38%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F++ + +APC++F DE+D++                  LNQ
Sbjct: 221 GSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQ 280

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           +L EMDG  A + V II ATNRPD++D ALLRPGR D+ I +  PD++ R QI K  L+K
Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKK 340

Query: 361 SPLAKDIDLSALAKYTQGF 417
                 +    +A+ T GF
Sbjct: 341 IKYNSTVLARIIARGTPGF 359

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 99.8 bits (247), Expect(2) = 1e-23
 Identities = 51/129 (39%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ ++P ++F DE+D+IAT+               L +
Sbjct: 229 GSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 288

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K
Sbjct: 289 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAK 348

Query: 361 SPLAKDIDL 387
             L++++DL
Sbjct: 349 MNLSEEVDL 357



 Score = 29.3 bits (64), Expect(2) = 1e-23
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIREN 478
           P   SGADI  ICQ A   A+REN
Sbjct: 364 PDRVSGADINAICQEAGMNAVREN 387

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score =  107 bits (268), Expect = 1e-23
 Identities = 55/133 (41%), Positives = 76/133 (57%)
 Frame = +1

Query: 19  MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 198
           M  G     VR++F+KA+ +APC++F DE+DS+ ++               LNQLL EMD
Sbjct: 303 MLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMD 362

Query: 199 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD 378
           G  ++  V ++ ATNR D++D ALLRPGR D+ I I LPD+  R  I K       L+  
Sbjct: 363 GFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSK 422

Query: 379 IDLSALAKYTQGF 417
           I L  +AK T GF
Sbjct: 423 ISLLDVAKRTPGF 435

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 51/134 (38%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR    C++FFDE+D+I                  + +
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           ++ ++DG +A+  + ++ ATNRPD +DPALLRPGRLD+ +   LPD++ R QIFK   R 
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRT 354

Query: 361 SPLAKDIDLSALAK 402
               +DI    LA+
Sbjct: 355 MNCERDIRFELLAR 368



 Score = 26.2 bits (56), Expect(2) = 2e-23
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GADI  +C  A  YAIR
Sbjct: 372 NSTGADIRSVCTEAGMYAIR 391

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 51/134 (38%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR    C++FFDE+D+I                  + +
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           ++ ++DG +A+  + ++ ATNRPD +DPALLRPGRLD+ +   LPD++ R QIFK   R 
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRT 354

Query: 361 SPLAKDIDLSALAK 402
               +DI    LA+
Sbjct: 355 MNCERDIRFELLAR 368



 Score = 26.2 bits (56), Expect(2) = 2e-23
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GADI  +C  A  YAIR
Sbjct: 372 NSTGADIRSVCTEAGMYAIR 391

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score =  107 bits (267), Expect = 2e-23
 Identities = 58/137 (42%), Positives = 77/137 (56%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           E    + GE    VRE+F+ AR  AP ++F DE+D+I  +               L QLL
Sbjct: 203 EFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLL 262

Query: 187 TEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
            E+DG      V II ATNR DI+DPALLRPGR D+LI +PLP+ + R +IF+  L+K  
Sbjct: 263 AEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMK 322

Query: 367 LAKDIDLSALAKYTQGF 417
              +I    LA  T+GF
Sbjct: 323 TDGNIRYDILASMTEGF 339

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score =  101 bits (252), Expect(2) = 2e-23
 Identities = 54/136 (39%), Positives = 78/136 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VR++F  AR   P V+F DE+D+IA++               + Q
Sbjct: 216 GSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQ 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL+EMDG + +  + II ATNR D++D A+LRPGR D+LI +P P+V  R +IF+   R 
Sbjct: 276 LLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRA 335

Query: 361 SPLAKDIDLSALAKYT 408
             +A  +D   LA  T
Sbjct: 336 MNVADSVDFGELAADT 351



 Score = 26.2 bits (56), Expect(2) = 2e-23
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIREN 478
           D SGAD+  IC  A  +AIR++
Sbjct: 353 DLSGADVKAICTEAGMFAIRDD 374

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score =  107 bits (266), Expect = 2e-23
 Identities = 54/133 (40%), Positives = 77/133 (57%)
 Frame = +1

Query: 19  MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 198
           M  G     VR++F+KA+ +APC++F DE+DS+ ++               LNQLL EMD
Sbjct: 300 MLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMD 359

Query: 199 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD 378
           G  ++  V ++ ATNR D++D ALLRPGR D+ I I LPD+  R  I +   +   L+  
Sbjct: 360 GFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSK 419

Query: 379 IDLSALAKYTQGF 417
           I L  +AK T GF
Sbjct: 420 ISLLDVAKRTPGF 432

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score =  106 bits (265), Expect = 3e-23
 Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G   + M+ G   + VR++FD A+  AP ++F DE+D+I  ++               LN
Sbjct: 242 GSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLN 301

Query: 178 QLLTEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           QLL EMDG  ++   V ++ ATNRP+I+DPALLRPGR D+ + +  PD   R +I K  +
Sbjct: 302 QLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHI 361

Query: 355 RKSPLAKDIDLSALAKYTQG 414
           +   LA D+DL  +AK T G
Sbjct: 362 KPVKLANDVDLQEIAKLTAG 381

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score =  106 bits (264), Expect = 4e-23
 Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G ++L+ W GE+E  +R +F++A+   P ++FFDE+D +A                 ++ 
Sbjct: 485 GADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAP---VRSSKQEQIHASIVST 541

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDGM+ +  V +IGATNRPD +DPAL RPGR D+  Y PLPDV +R +I +   RK
Sbjct: 542 LLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRK 601

Query: 361 --SPLAKDIDLSALAKYTQGF 417
             SPL+ +  +  LA  T+G+
Sbjct: 602 WSSPLSTNF-IDKLAFLTKGY 621

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score =  100 bits (250), Expect(2) = 5e-23
 Identities = 52/129 (40%), Positives = 74/129 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  A+ +AP ++F DE+D+IAT+               L +
Sbjct: 232 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 291

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K
Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351

Query: 361 SPLAKDIDL 387
             L++++DL
Sbjct: 352 MNLSEEVDL 360



 Score = 25.8 bits (55), Expect(2) = 5e-23
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIRE 475
           P   SGADI  ICQ     A+RE
Sbjct: 367 PDKISGADINSICQARGMLAVRE 389

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score =  102 bits (254), Expect(2) = 5e-23
 Identities = 55/138 (39%), Positives = 78/138 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 215 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 274

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+DPALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 275 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 335 MNLTRGINLRKIAELMPG 352



 Score = 24.3 bits (51), Expect(2) = 5e-23
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 353 ASGAEVKGVCTEAGMYALRE 372

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score =  101 bits (251), Expect(2) = 5e-23
 Identities = 55/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 215 GAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLE 274

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG    K + II ATNR DI+DPALLRPGR+D+ I  P P V +R +I +   RK
Sbjct: 275 LLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRK 334

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 335 MNLTRGINLRKVAEKMNG 352



 Score = 25.4 bits (54), Expect(2) = 5e-23
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRE 475
           SGAD+  +C  A  YA+RE
Sbjct: 354 SGADVKGVCTEAGMYALRE 372

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score =  102 bits (254), Expect(2) = 5e-23
 Identities = 55/138 (39%), Positives = 78/138 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 212 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 271

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+DPALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 272 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 331

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 332 MNLTRGINLRKIAELMPG 349



 Score = 24.3 bits (51), Expect(2) = 5e-23
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 350 ASGAEVKGVCTEAGMYALRE 369

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score =  103 bits (256), Expect(2) = 5e-23
 Identities = 55/132 (41%), Positives = 73/132 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  AR  AP ++F DE+DSIAT+               L +
Sbjct: 201 GSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIE 260

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL +MDG +    V +I ATNR D IDPALLRPGRLD+ I  PLPD   +  +F A   K
Sbjct: 261 LLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSK 320

Query: 361 SPLAKDIDLSAL 396
             L   +D+ +L
Sbjct: 321 MSLNDSVDIESL 332



 Score = 23.5 bits (49), Expect(2) = 5e-23
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIR 472
           P+  S ADI  ICQ A   A+R
Sbjct: 336 PEKISCADINSICQEAGMLAVR 357

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score =  105 bits (262), Expect = 7e-23
 Identities = 53/139 (38%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + + M+ G   + VR++F +AR  AP ++F DELD+I  +               LNQ
Sbjct: 207 GSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIG-KSRLNAIHSNDEREQTLNQ 265

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG +    + ++ ATNRPD++DPALLRPGR D+ + +  PD+  R  I +   + 
Sbjct: 266 LLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQN 325

Query: 361 SPLAKDIDLSALAKYTQGF 417
             LA ++DL A+A+ T G+
Sbjct: 326 VKLAPEVDLKAVARITGGY 344

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score =  104 bits (260), Expect = 1e-22
 Identities = 56/139 (40%), Positives = 77/139 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E   M+ G   + +R +F +A+ +APCV+F DELDS+  +               +NQ
Sbjct: 347 GSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT--INQ 404

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG    + V IIGATN P+ +D AL+RPGR D  + +P PDV  R +I K  L K
Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 464

Query: 361 SPLAKDIDLSALAKYTQGF 417
               K +D   +A+ T GF
Sbjct: 465 IKFDKSVDPEIIARGTVGF 483

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score =  101 bits (251), Expect(2) = 2e-22
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+ ++DG + +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD++ R  IFK   R 
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query: 361 SPLAKDIDLSALAK 402
             + +DI    LA+
Sbjct: 362 MSVERDIRFELLAR 375



 Score = 23.1 bits (48), Expect(2) = 2e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GA+I  +C  A  +AIR
Sbjct: 379 NSTGAEIRSVCTEAGMFAIR 398

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  101 bits (251), Expect(2) = 2e-22
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+ ++DG + +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD++ R  IFK   R 
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360

Query: 361 SPLAKDIDLSALAK 402
             + +DI    LA+
Sbjct: 361 MSVERDIRFELLAR 374



 Score = 23.1 bits (48), Expect(2) = 2e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GA+I  +C  A  +AIR
Sbjct: 378 NSTGAEIRSVCTEAGMFAIR 397

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  101 bits (251), Expect(2) = 2e-22
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+ ++DG + +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD++ R  IFK   R 
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360

Query: 361 SPLAKDIDLSALAK 402
             + +DI    LA+
Sbjct: 361 MSVERDIRFELLAR 374



 Score = 23.1 bits (48), Expect(2) = 2e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GA+I  +C  A  +AIR
Sbjct: 378 NSTGAEIRSVCTEAGMFAIR 397

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  101 bits (251), Expect(2) = 2e-22
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+ ++DG + +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD++ R  IFK   R 
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360

Query: 361 SPLAKDIDLSALAK 402
             + +DI    LA+
Sbjct: 361 MSVERDIRFELLAR 374



 Score = 23.1 bits (48), Expect(2) = 2e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GA+I  +C  A  +AIR
Sbjct: 378 NSTGAEIRSVCTEAGMFAIR 397

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score =  102 bits (254), Expect(2) = 2e-22
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F+ AR   PC++F DE+D+I  +               L +LL 
Sbjct: 203 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 262

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           +MDG +    V +I ATNRPD +DPALLRPGRLD+ I+I LP+  +R  I K  +   P+
Sbjct: 263 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPI 320

Query: 370 AK--DIDLSALAKYTQGF 417
            K  +ID  A+ K + GF
Sbjct: 321 TKHGEIDYEAIVKLSDGF 338



 Score = 21.9 bits (45), Expect(2) = 2e-22
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           +GAD+  +C  A  +AIR
Sbjct: 339 NGADLRNVCTEAGMFAIR 356

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score =  102 bits (254), Expect(2) = 2e-22
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F+ AR   PC++F DE+D+I  +               L +LL 
Sbjct: 203 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 262

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           +MDG +    V +I ATNRPD +DPALLRPGRLD+ I+I LP+  +R  I K  +   P+
Sbjct: 263 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPI 320

Query: 370 AK--DIDLSALAKYTQGF 417
            K  +ID  A+ K + GF
Sbjct: 321 TKHGEIDYEAIVKLSDGF 338



 Score = 21.9 bits (45), Expect(2) = 2e-22
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           +GAD+  +C  A  +AIR
Sbjct: 339 NGADLRNVCTEAGMFAIR 356

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score =  102 bits (254), Expect(2) = 2e-22
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F+ AR   PC++F DE+D+I  +               L +LL 
Sbjct: 203 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 262

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           +MDG +    V +I ATNRPD +DPALLRPGRLD+ I+I LP+  +R  I K  +   P+
Sbjct: 263 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK--IHAGPI 320

Query: 370 AK--DIDLSALAKYTQGF 417
            K  +ID  A+ K + GF
Sbjct: 321 TKHGEIDYEAIVKLSDGF 338



 Score = 21.9 bits (45), Expect(2) = 2e-22
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIR 472
           +GAD+  +C  A  +AIR
Sbjct: 339 NGADLRNVCTEAGMFAIR 356

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score =  103 bits (256), Expect = 3e-22
 Identities = 55/139 (39%), Positives = 77/139 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E   M+ G   + +R +F +A+ +APCV+F DELDS+  +               +NQ
Sbjct: 405 GSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT--INQ 462

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG    + V IIGATN P+ +D AL+RPGR D  + +P PDV  R +I K  L K
Sbjct: 463 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 522

Query: 361 SPLAKDIDLSALAKYTQGF 417
               + +D   +A+ T GF
Sbjct: 523 IKFDQSVDPEIIARGTVGF 541

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  103 bits (256), Expect = 3e-22
 Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G   + M+ G   + VR++F+ A+  AP ++F DE+D+I  ++               LN
Sbjct: 236 GSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLN 295

Query: 178 QLLTEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           QLL EMDG  ++   V ++ ATNRP+I+DPAL+RPGR D+ + +  PD + R +I K  +
Sbjct: 296 QLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHI 355

Query: 355 RKSPLAKDIDLSALAKYTQG 414
           +   LA D++L  +AK T G
Sbjct: 356 KGVKLANDVNLQEVAKLTAG 375

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  103 bits (256), Expect = 3e-22
 Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G   + M+ G   + VR++F+ A+  AP ++F DE+D+I  ++               LN
Sbjct: 236 GSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLN 295

Query: 178 QLLTEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           QLL EMDG  ++   V ++ ATNRP+I+DPAL+RPGR D+ + +  PD + R +I K  +
Sbjct: 296 QLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHI 355

Query: 355 RKSPLAKDIDLSALAKYTQG 414
           +   LA D++L  +AK T G
Sbjct: 356 KGVKLANDVNLQEVAKLTAG 375

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score =  103 bits (256), Expect = 3e-22
 Identities = 57/135 (42%), Positives = 75/135 (55%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F  A+   PCV+F DE+D+I  +               L +LL 
Sbjct: 202 IVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 261

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           +MDG +      II ATNRPD +DPALLRPGRLD+ I IPLP+   R +I K  L K   
Sbjct: 262 QMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSK 321

Query: 370 AKDIDLSALAKYTQG 414
             +ID  AL K T G
Sbjct: 322 QGEIDYEALVKLTDG 336

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score =  102 bits (254), Expect(2) = 4e-22
 Identities = 54/136 (39%), Positives = 78/136 (57%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F+ AR   PC++F DE+D+I  +               L +LL 
Sbjct: 220 IVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 279

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           ++DG ++   V +I ATNRPD +DPALLRPGRLD+ I I LP+  SR +I K    K   
Sbjct: 280 QLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITK 339

Query: 370 AKDIDLSALAKYTQGF 417
             +ID  A+ K + GF
Sbjct: 340 HGEIDFEAVVKLSDGF 355



 Score = 21.2 bits (43), Expect(2) = 4e-22
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           S AD+  +C  A  +AIR   E
Sbjct: 356 SAADLRNVCTEAGMFAIRAERE 377

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score =  101 bits (251), Expect(2) = 4e-22
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLN 177
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +++               + 
Sbjct: 212 GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTML 271

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           +LL ++DG  A K + +I ATNR DI+DPALLRPGR+D+ I  P P  ++R +I +   R
Sbjct: 272 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSR 331

Query: 358 KSPLAKDIDLSALAKYTQG 414
              L + IDL ++A+   G
Sbjct: 332 SMNLTRGIDLKSIAEKMNG 350



 Score = 22.3 bits (46), Expect(2) = 4e-22
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  +A+RE
Sbjct: 351 ASGAELKGVCTEAGMFALRE 370

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score =  102 bits (255), Expect = 4e-22
 Identities = 55/138 (39%), Positives = 78/138 (56%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           P+L+ M+ GE    VR+ F  A+  AP ++F DELD+I T+               + +L
Sbjct: 249 PQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLEL 308

Query: 184 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
           L ++DG ++   V ++ ATNR D++DPALLR GRLD+ I  PLP  DSR QI +   RK 
Sbjct: 309 LNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKM 368

Query: 364 PLAKDIDLSALAKYTQGF 417
               DI+   LA+ T  F
Sbjct: 369 TTDDDINWQELARSTDEF 386

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score =  102 bits (254), Expect = 6e-22
 Identities = 50/139 (35%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  APC++F DE+D+I T+               + +
Sbjct: 238 GPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 297

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG ++ + + +I ATNR DI+DPAL+R GRLD+ I  P P  ++R +I +   RK
Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 357

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +  D++   LA+ T  F
Sbjct: 358 MNVHPDVNFEELARSTDDF 376

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score =  102 bits (254), Expect = 6e-22
 Identities = 55/139 (39%), Positives = 77/139 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E   +  G+    VR++FDKA+  APC++F DE+DS+ ++               +NQ
Sbjct: 267 GSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQT--INQ 324

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL+EMDG    + + +I ATNR D +D ALLRPGR D  + +P PD+  R  IF   L K
Sbjct: 325 LLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSK 384

Query: 361 SPLAKDIDLSALAKYTQGF 417
              +  ID   LAK + GF
Sbjct: 385 IVHSGGIDPKVLAKGSTGF 403

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 98.6 bits (244), Expect(2) = 7e-22
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 216 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 336 MNLTRGINLRKIAELMPG 353



 Score = 24.3 bits (51), Expect(2) = 7e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 354 ASGAEVKGVCTEAGMYALRE 373

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 98.6 bits (244), Expect(2) = 7e-22
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 216 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 336 MNLTRGINLRKIAELMPG 353



 Score = 24.3 bits (51), Expect(2) = 7e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 354 ASGAEVKGVCTEAGMYALRE 373

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 98.6 bits (244), Expect(2) = 7e-22
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 216 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 336 MNLTRGINLRKIAELMPG 353



 Score = 24.3 bits (51), Expect(2) = 7e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 354 ASGAEVKGVCTEAGMYALRE 373

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 98.6 bits (244), Expect(2) = 7e-22
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 216 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 336 MNLTRGINLRKIAELMPG 353



 Score = 24.3 bits (51), Expect(2) = 7e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 354 ASGAEVKGVCTEAGMYALRE 373

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 98.6 bits (244), Expect(2) = 7e-22
 Identities = 54/138 (39%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +                + +
Sbjct: 216 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE 275

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 336 MNLTRGINLRKIAELMPG 353



 Score = 24.3 bits (51), Expect(2) = 7e-22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 354 ASGAEVKGVCTEAGMYALRE 373

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score =  101 bits (252), Expect = 1e-21
 Identities = 49/139 (35%), Positives = 81/139 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  +PC++F DE+D+I T+               + +
Sbjct: 243 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 302

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG ++ + + +I ATNR DI+DPAL+R GRLD+ I  P P  ++R +I +   RK
Sbjct: 303 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRK 362

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +  D++   LA+ T  F
Sbjct: 363 MNVNPDVNFEELARSTDDF 381

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score =  101 bits (252), Expect = 1e-21
 Identities = 54/136 (39%), Positives = 75/136 (55%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  + GES   +RE+F  A+   PC++F DE+D+I  +               L +LLT
Sbjct: 251 IVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLT 310

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
           +MDG +      II ATNRPD +DPALLRPGRLD+ + IPLP+   R +IFK    K   
Sbjct: 311 QMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKK 370

Query: 370 AKDIDLSALAKYTQGF 417
             + D  A  K + GF
Sbjct: 371 TGEFDFEAAVKMSDGF 386

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score =  101 bits (251), Expect = 1e-21
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXX-XLN 177
           GPE + +  G   A VR +F +AR  APC+++ DE+D++  +                LN
Sbjct: 375 GPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLN 434

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           QLL EMDGM     V ++ +TNR DI+D AL+RPGRLD+ ++I LP +  R +IF+  L+
Sbjct: 435 QLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLK 494

Query: 358 KSPLAKDIDL--SALAKYTQGF 417
              L +        LA+ T GF
Sbjct: 495 SLKLTQSSTFYSQRLAELTPGF 516

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score =  101 bits (251), Expect = 1e-21
 Identities = 52/139 (37%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  AP ++F DELD+I T+               + +
Sbjct: 253 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 312

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+P+ ++R +I +   RK
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372

Query: 361 SPLAKDIDLSALAKYTQGF 417
             ++ D++   LA+ T  F
Sbjct: 373 MNVSPDVNYEELARCTDDF 391

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score =  101 bits (251), Expect = 1e-21
 Identities = 52/139 (37%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  AP ++F DELD+I T+               + +
Sbjct: 253 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 312

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+P+ ++R +I +   RK
Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372

Query: 361 SPLAKDIDLSALAKYTQGF 417
             ++ D++   LA+ T  F
Sbjct: 373 MNVSPDVNYEELARCTDDF 391

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score =  101 bits (251), Expect = 1e-21
 Identities = 52/139 (37%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  AP ++F DELD+I T+               + +
Sbjct: 256 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 315

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+P+ ++R +I +   RK
Sbjct: 316 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 375

Query: 361 SPLAKDIDLSALAKYTQGF 417
             ++ D++   LA+ T  F
Sbjct: 376 MNVSPDVNYEELARCTDDF 394

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/139 (39%), Positives = 76/139 (54%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E   M+ G   + +R +F +A+ +APCV+F DELDS+  +               + Q
Sbjct: 347 GSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPYSRQT--IIQ 404

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL EMDG    + V IIGATN P+ +D AL+RPGR D  + +P PDV  R +I K  L K
Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 464

Query: 361 SPLAKDIDLSALAKYTQGF 417
               K +D   +A+ T GF
Sbjct: 465 IKFDKSVDPEIIARGTVGF 483

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 96.7 bits (239), Expect(2) = 2e-21
 Identities = 48/132 (36%), Positives = 78/132 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A   AP ++F DE+D++ T+               + +
Sbjct: 251 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 310

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF     +
Sbjct: 311 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSR 370

Query: 361 SPLAKDIDLSAL 396
             LA+D++LS L
Sbjct: 371 MTLAEDVNLSEL 382



 Score = 24.6 bits (52), Expect(2) = 2e-21
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIRE 475
           D SGADI  IC  A   A+RE
Sbjct: 388 DLSGADIKAICTEAGLMALRE 408

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score =  100 bits (249), Expect = 2e-21
 Identities = 49/139 (35%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  +PC++F DE+D+I T+               + +
Sbjct: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG ++   + +I ATNR DI+DPAL+R GRLD+ I  P P  ++R +I +   RK
Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +  D++   LA+ T  F
Sbjct: 357 MNVNPDVNFEELARSTDDF 375

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 96.3 bits (238), Expect(2) = 3e-21
 Identities = 55/138 (39%), Positives = 78/138 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI ++               L +
Sbjct: 211 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTML-E 269

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+ ++R  I K   RK
Sbjct: 270 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 329

Query: 361 SPLAKDIDLSALAKYTQG 414
             L + I+L  +A+   G
Sbjct: 330 MNLTRGINLRKIAELMPG 347



 Score = 24.3 bits (51), Expect(2) = 3e-21
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 348 ASGAEVKGVCTEAGMYALRE 367

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 51/139 (36%), Positives = 79/139 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  AP ++F DELD+I  +               + +
Sbjct: 218 GPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLE 277

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+P+ ++R +I +   RK
Sbjct: 278 LLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 337

Query: 361 SPLAKDIDLSALAKYTQGF 417
             ++ D++   LA+ T  F
Sbjct: 338 MNVSPDVNYEELARCTDDF 356

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 95.9 bits (237), Expect(2) = 4e-21
 Identities = 48/129 (37%), Positives = 77/129 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A   +P ++F DE+D++ T+               + +
Sbjct: 260 GSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLE 319

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPALLRPGR+D+ I  PLPD+ +R +IF+    K
Sbjct: 320 LLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSK 379

Query: 361 SPLAKDIDL 387
             LA D++L
Sbjct: 380 MTLADDVNL 388



 Score = 24.3 bits (51), Expect(2) = 4e-21
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 404 TPKDSSGADITEICQRACKYAIRE 475
           T  + SGADI  IC  A   A+RE
Sbjct: 394 TKDEFSGADIKAICTEAGLLALRE 417

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 51/139 (36%), Positives = 79/139 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VR++F+ A    P ++F DE+D++A +               + Q
Sbjct: 219 GSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQ 278

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL+EMDG + +  + II ATNR D++D A+LRPGR D+LI +P P+ D+R +I +    +
Sbjct: 279 LLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGE 338

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +A  +D S LA  T  F
Sbjct: 339 MNVADSVDFSDLAADTAEF 357

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 49/139 (35%), Positives = 80/139 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  +PC++F DE+D+I T+               + +
Sbjct: 233 GPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 292

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG ++   + +I ATNR DI+DPAL+R GRLD+ I  P P  ++R +I +   RK
Sbjct: 293 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRK 352

Query: 361 SPLAKDIDLSALAKYTQGF 417
             +  D++   LA+ T  F
Sbjct: 353 MNVNADVNFEELARSTDDF 371

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 50/134 (37%), Positives = 78/134 (58%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           GP+L+ M+ G+    VR+ F  A+  AP ++F DELD+I T+               + +
Sbjct: 237 GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 296

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+P+ ++R +I +   RK
Sbjct: 297 LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 356

Query: 361 SPLAKDIDLSALAK 402
             ++ D++   LA+
Sbjct: 357 MNVSPDVNYEELAR 370

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 94.0 bits (232), Expect(2) = 1e-20
 Identities = 48/132 (36%), Positives = 76/132 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A   AP ++F DE+D+I T+               + +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF+    +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371

Query: 361 SPLAKDIDLSAL 396
             LA D+ L  L
Sbjct: 372 MTLADDVTLDDL 383



 Score = 24.6 bits (52), Expect(2) = 1e-20
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIRE 475
           D SGADI  IC  A   A+RE
Sbjct: 389 DLSGADIKAICTEAGLMALRE 409

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 94.0 bits (232), Expect(2) = 1e-20
 Identities = 48/132 (36%), Positives = 76/132 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A   AP ++F DE+D+I T+               + +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF+    +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371

Query: 361 SPLAKDIDLSAL 396
             LA D+ L  L
Sbjct: 372 MTLADDVTLDDL 383



 Score = 24.6 bits (52), Expect(2) = 1e-20
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIRE 475
           D SGADI  IC  A   A+RE
Sbjct: 389 DLSGADIKAICTEAGLMALRE 409

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 94.0 bits (232), Expect(2) = 1e-20
 Identities = 48/132 (36%), Positives = 76/132 (57%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A   AP ++F DE+D+I T+               + +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF+    +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371

Query: 361 SPLAKDIDLSAL 396
             LA D+ L  L
Sbjct: 372 MTLADDVTLDDL 383



 Score = 24.6 bits (52), Expect(2) = 1e-20
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIRE 475
           D SGADI  IC  A   A+RE
Sbjct: 389 DLSGADIKAICTEAGLMALRE 409

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 57/133 (42%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  AR +AP ++F DE+DSIAT+               L +
Sbjct: 239 GSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIE 298

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP-LPDVDSRHQIFKACLR 357
           LLT+MDG +    V +I ATNR D +DPALLRPGRLD+ I  P L D   R  IF     
Sbjct: 299 LLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIAS 358

Query: 358 KSPLAKDIDLSAL 396
           K  LA + DL +L
Sbjct: 359 KMSLAPEADLDSL 371

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 52/138 (37%), Positives = 78/138 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E   ++ G     +R++F +AR  AP ++F DELD+I  +               LNQ
Sbjct: 347 GSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYAKQT---LNQ 403

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL E+DG +    + IIGATN P+ +D AL RPGR D+++ + LPDV  R  I K  ++K
Sbjct: 404 LLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKK 463

Query: 361 SPLAKDIDLSALAKYTQG 414
             LA ++D + +A+ T G
Sbjct: 464 ITLADNVDPTIIARGTPG 481

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 95.9 bits (237), Expect(2) = 2e-20
 Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLN 177
           G E + M+ G   A VR++F  AR +AP ++F DE+D+I   +               LN
Sbjct: 414 GSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLN 473

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           Q+L EMDG      V ++  TNRPDI+D ALLRPGR D+ I I  P+++ R  IF   L 
Sbjct: 474 QMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLH 533

Query: 358 KSPLAKDI-DL-SALAKYTQGF 417
              LA +I DL + LA  T GF
Sbjct: 534 HLKLAGEIFDLKNRLAALTPGF 555



 Score = 22.3 bits (46), Expect(2) = 2e-20
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIREN 478
           SGADI  +C  A   A R +
Sbjct: 556 SGADIANVCNEAALIAARSD 575

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 91.7 bits (226), Expect(2) = 2e-20
 Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  AP  +F DE+DSI ++                ++LL 
Sbjct: 303 LTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVK--SELLI 360

Query: 190 EMDGMN-------AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG++       + K V ++ ATN P  ID AL R  RL++ IYIPLP++D R Q+ + 
Sbjct: 361 QMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGREQLLRI 418

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            L++ PLA DIDL ++A+   G+
Sbjct: 419 NLKEVPLADDIDLKSIAEKMDGY 441



 Score = 26.6 bits (57), Expect(2) = 2e-20
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADIT +C+ A   A+R  I+
Sbjct: 442 SGADITNVCRDASMMAMRRRIQ 463

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 95.1 bits (235), Expect(2) = 2e-20
 Identities = 46/134 (34%), Positives = 75/134 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D++                  + +
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+ ++DG + +  + ++ ATNRPD +DPAL+RPGRLD+ +   LPD+  R  I K   ++
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363

Query: 361 SPLAKDIDLSALAK 402
             + +DI    LA+
Sbjct: 364 MSVERDIRYDLLAR 377



 Score = 23.1 bits (48), Expect(2) = 2e-20
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIR 472
           +S+GA+I  +C  A  +AIR
Sbjct: 381 NSTGAEIRSVCTEAGMFAIR 400

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXX--XXL 174
           G E + M+ G   + VR++F +AR  AP ++F DE+D+I  +                 L
Sbjct: 354 GSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATL 413

Query: 175 NQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
           NQLL EMDG      V ++  TNRPD++D AL+RPGR D+ I I  PDV+ R QI+   L
Sbjct: 414 NQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHL 473

Query: 355 RK---SPLAKDIDLS----ALAKYTQGF 417
           ++    PL  D D++     LA  T GF
Sbjct: 474 KRLNLDPLLTD-DMNNLSGKLATLTPGF 500

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 92.8 bits (229), Expect(2) = 3e-20
 Identities = 47/132 (35%), Positives = 75/132 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A    P ++F DE+D+I T+               + +
Sbjct: 252 GSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 311

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF+    +
Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371

Query: 361 SPLAKDIDLSAL 396
             LA D+ L  L
Sbjct: 372 MTLADDVTLDEL 383



 Score = 24.6 bits (52), Expect(2) = 3e-20
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 413 DSSGADITEICQRACKYAIRE 475
           D SGADI  IC  A   A+RE
Sbjct: 389 DLSGADIKAICTEAGLMALRE 409

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  AR ++P ++F DE+D+IAT+               L +
Sbjct: 233 GSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 292

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP-LPDVDSRHQIFKACLR 357
           LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  P L D   R  IF     
Sbjct: 293 LLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIAS 352

Query: 358 KSPLAKDIDLSAL 396
           K  L+ ++DL +L
Sbjct: 353 KMSLSPEVDLDSL 365

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 93.2 bits (230), Expect(2) = 5e-20
 Identities = 42/115 (36%), Positives = 69/115 (60%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D++                  + +
Sbjct: 276 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLE 335

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFK 345
           L+T++DG + +  + ++ ATNRP+ +DPALLRPGR+D+ +   LPD++ R  IF+
Sbjct: 336 LITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 390



 Score = 23.5 bits (49), Expect(2) = 5e-20
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 380 LISVLWPSTPKDSSGADITEICQRACKYAIR 472
           LIS L P+    S+GA++  +C  A  +AIR
Sbjct: 406 LISRLCPN----STGAELRSVCTEAGMFAIR 432

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 95.5 bits (236), Expect(2) = 6e-20
 Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + L+ W GESE  +R +FD+A    P ++FFDE+D +A                 ++ 
Sbjct: 153 GADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAP---VRSSRQDQIHSSIVST 209

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDG++++  + +IGATNR D IDPAL RPGR D+     LPD ++R +I K   R 
Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRD 269

Query: 361 -SPLAKDIDLSALAKYTQGF 417
            +P   D+ L  LA++  G+
Sbjct: 270 WNPKPVDMFLEELAEHCVGY 289



 Score = 20.8 bits (42), Expect(2) = 6e-20
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 422 GADITEICQRACKYAIR 472
           GADI  IC  A   A+R
Sbjct: 291 GADIKSICAEAALCALR 307

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 93.2 bits (230), Expect(2) = 6e-20
 Identities = 44/129 (34%), Positives = 77/129 (59%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VRE+F  A  +AP ++F DE+D++ T+               + +
Sbjct: 255 GSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 314

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG +++  V ++ ATNR + +DPAL+RPGR+D+ I  PLPD  ++ +IF+    +
Sbjct: 315 LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374

Query: 361 SPLAKDIDL 387
             L K+++L
Sbjct: 375 MTLGKEVNL 383



 Score = 23.1 bits (48), Expect(2) = 6e-20
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 404 TPKDS-SGADITEICQRACKYAIRE 475
           T KD  SGADI  +C  A   A+RE
Sbjct: 388 TAKDELSGADIKAMCTEAGLLALRE 412

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 95.5 bits (236), Expect = 7e-20
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXXXXXXXXXXXX 168
           GPELL  + GE+E ++R IF +AR  A    P ++FFDE+DSI                 
Sbjct: 334 GPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFR--TRGTGVSSDVETT 391

Query: 169 XLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
            + QLL+E+DG+   + V +IGA+NR D+IDPA+LRPGRLD  I I  PD ++   I+  
Sbjct: 392 VVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSK 451

Query: 349 CLRKS 363
            L +S
Sbjct: 452 YLTES 456

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 95.1 bits (235), Expect = 9e-20
 Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + L+ W GESE  +R +FD+A    P ++FFDE+D +A                 ++ 
Sbjct: 463 GADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAP---VRSSKQDQIHASIVST 519

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDG++ +  V +IGATNR D +DPAL RPGR D+ +   LPD+++R QI      K
Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSK 579

Query: 361 SPLAKDI--DLSALAKYTQGF 417
               K I   L A+A+ T G+
Sbjct: 580 WEENKPIPETLDAIAERTSGY 600

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 93.6 bits (231), Expect(2) = 1e-19
 Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLN 177
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +T+               + 
Sbjct: 223 GSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTML 282

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           +LL ++DG  + + + II ATNR DI+DPALLRPGR+D+ I  P P+  +R  I K   R
Sbjct: 283 ELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSR 342

Query: 358 KSPLAKDIDLSALAKYTQG 414
           +  L + I+L  +A    G
Sbjct: 343 RMNLTRGINLRKIASMLGG 361



 Score = 21.9 bits (45), Expect(2) = 1e-19
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA+I   C  A  +A+RE
Sbjct: 362 ASGAEIKATCTEAGMFALRE 381

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 94.4 bits (233), Expect(2) = 1e-19
 Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + L+ W GESE  +R +FD+A    P ++FFDE+D +A                 ++ 
Sbjct: 329 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAP---VRSSRQDQIHSSIVST 385

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDG++++  + +IGATNR D IDPAL RPGR D+     LPD ++R +I K   R 
Sbjct: 386 LLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRD 445

Query: 361 -SPLAKDIDLSALAKYTQGFK 420
            +P   D  L  LA+   G++
Sbjct: 446 WNPKPLDTFLEELAENCVGYR 466



 Score = 20.8 bits (42), Expect(2) = 1e-19
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 422 GADITEICQRACKYAIR 472
           GADI  IC  A   A+R
Sbjct: 467 GADIKSICAEAALCALR 483

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 90.9 bits (224), Expect(2) = 1e-19
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLN 177
           G EL+  + GE    VRE+F  AR  AP ++F DE+DSI +++               + 
Sbjct: 198 GSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTML 257

Query: 178 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           +LL ++DG  + K + ++  TNR DI+DPALLRPGR+D+ I  P P    R  I K   R
Sbjct: 258 ELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSR 317

Query: 358 KSPLAKDIDLSALAKYTQG 414
           K  L + I+L  ++    G
Sbjct: 318 KMNLTRGINLKKISDKMNG 336



 Score = 24.3 bits (51), Expect(2) = 1e-19
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 416 SSGADITEICQRACKYAIRE 475
           +SGA++  +C  A  YA+RE
Sbjct: 337 ASGAELKAVCTEAGMYALRE 356

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 94.0 bits (232), Expect(2) = 1e-19
 Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G E +  + GE    VR++F  AR +AP ++F DE+D+IAT+               L +
Sbjct: 201 GSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIE 260

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP-LPDVDSRHQIFKACLR 357
           LLT+MDG +    V +I ATNR D +DPALLRPGRLD+ I  P   D   R  +F+    
Sbjct: 261 LLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITA 320

Query: 358 KSPLAKDIDL 387
           K  L+ ++DL
Sbjct: 321 KMLLSPEVDL 330



 Score = 21.2 bits (43), Expect(2) = 1e-19
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 407 PKDSSGADITEICQRACKYAIREN 478
           P  SSGA I  I Q A   A+R++
Sbjct: 337 PDASSGAQIAAIMQDAGLLAVRKS 360

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L  + GESEAN+R++F  A          S   ++ FDE+D+I  Q          
Sbjct: 287 GPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGV 346

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL+++DG+     + +IG TNRPD+ID ALLRPGRL+  + I LPD   R Q
Sbjct: 347 HDTV-VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQ 405

Query: 337 IF---KACLR-KSPLAKDIDLSALAKYTQGF 417
           I     A +R    L+ D+D+  LA  T+ F
Sbjct: 406 ILHIHTARMRGHQLLSADVDIKELAVETKNF 436

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L  + GESEAN+R++F  A          S   ++ FDE+D+I  Q          
Sbjct: 287 GPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGV 346

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL+++DG+     + +IG TNRPD+ID ALLRPGRL+  + I LPD   R Q
Sbjct: 347 HDTV-VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQ 405

Query: 337 IF---KACLR-KSPLAKDIDLSALAKYTQGF 417
           I     A +R    L+ D+D+  LA  T+ F
Sbjct: 406 ILHIHTARMRGHQLLSADVDIKELAVETKNF 436

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L  + GESEAN+R++F  A          S   ++ FDE+D+I  Q          
Sbjct: 287 GPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGV 346

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL+++DG+     + +IG TNRPD+ID ALLRPGRL+  + I LPD   R Q
Sbjct: 347 HDTV-VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQ 405

Query: 337 IF---KACLR-KSPLAKDIDLSALAKYTQGF 417
           I     A +R    L+ D+D+  LA  T+ F
Sbjct: 406 ILHIHTARMRGHQLLSADVDIKELAVETKNF 436

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 49/138 (35%), Positives = 78/138 (56%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           P+L+ M+ G+    VR+ F  A+  +P ++F DELD+I T+               + +L
Sbjct: 253 PQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 312

Query: 184 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
           L ++DG ++   V +I ATNR D +DPALLR GRLD+ +  PLP+ ++R  I +   RK 
Sbjct: 313 LNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKM 372

Query: 364 PLAKDIDLSALAKYTQGF 417
            +  DI+   LA+ T  +
Sbjct: 373 AIDDDINWEELARSTDEY 390

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXXXXXXXXXXXX 168
           GPELL  + GE+E ++R IF +AR  A    P ++FFDE+DSI                 
Sbjct: 334 GPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFR--TRGTGVSSDVETT 391

Query: 169 XLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
            + QLL+E+DG+   + V +IGA+NR D+IDPA+LRPGRLD  I I  PD ++   I+  
Sbjct: 392 VVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSK 451

Query: 349 CL 354
            L
Sbjct: 452 YL 453

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXXXXXXXXXXXX 168
           GPELL  + GE+E ++R IF +AR  A    P ++FFDE+DSI                 
Sbjct: 334 GPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFR--TRGTGVSSDVETT 391

Query: 169 XLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
            + QLL+E+DG+   + V +IGA+NR D+IDPA+LRPGRLD  I I  PD ++   I+  
Sbjct: 392 VVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSK 451

Query: 349 CL 354
            L
Sbjct: 452 YL 453

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 92.4 bits (228), Expect(2) = 2e-19
 Identities = 44/134 (32%), Positives = 75/134 (55%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct: 246 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 305

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           L+T++DG + +  + ++ ATNRP+ +D AL+RPGR+D+ +   LPD++ R  I +   + 
Sbjct: 306 LITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKS 365

Query: 361 SPLAKDIDLSALAK 402
             + KDI    +A+
Sbjct: 366 MAIDKDIRWELIAR 379



 Score = 21.9 bits (45), Expect(2) = 2e-19
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 LISVLWPSTPKDSSGADITEICQRACKYAIR 472
           LI+ L PS     +GA++  +C  A  +AIR
Sbjct: 376 LIARLCPS----QTGAELRSVCTEAGMFAIR 402

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFD--------KARGSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L+ + G SE N+R +F         K   S   V+ FDELDS+  Q          
Sbjct: 344 GPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTG 403

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL++MDG++    + +IG TNR D+ID ALLRPGR +  I I LPD   R  
Sbjct: 404 VGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKD 463

Query: 337 IF----KACLRKSPLAKDIDLSALAKYTQGF 417
           IF    K       L+ D++   L+  T+ F
Sbjct: 464 IFLIHTKKLTENGILSSDVNFDELSTLTKNF 494

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIF--------DKARGSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L  + G+SE NVR++F        D+   S   ++ FDELD+I  +          
Sbjct: 338 GPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGV 397

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL +MDG++    + +IG TNR D+ID ALLRPGRL+  + I LPD   R Q
Sbjct: 398 GDQV-VNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQ 456

Query: 337 IFKACLRKSP----LAKDIDLSALAKYTQGF 417
           I K    +      L  D+D+  LA  T+ F
Sbjct: 457 ILKIHTSRMASNGILENDVDMEELASLTKNF 487

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 93.2 bits (230), Expect(2) = 3e-19
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G + L+ W GESE  +R +FD+A    P ++FFDE+D +A                 ++ 
Sbjct: 498 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAP---VRSSRQDQIHSSIVST 554

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL  MDG++++  + +IGATNR D IDPAL RPGR D+     LPD ++R +I K   R 
Sbjct: 555 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRD 614

Query: 361 -SPLAKDIDLSALAKYTQGF 417
            +P   D  L  LA+   G+
Sbjct: 615 WNPKPLDTFLEELAENCVGY 634



 Score = 20.8 bits (42), Expect(2) = 3e-19
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 422 GADITEICQRACKYAIR 472
           GADI  IC  A   A+R
Sbjct: 636 GADIKSICAEAALCALR 652

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARG--------SAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L+ + G SE N+R +F  A          S+  ++ FDELDS+  Q          
Sbjct: 308 GPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGV 367

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL +MDG++    + +IG TNR D+ID ALLRPGR +  + I LPD   R Q
Sbjct: 368 GDNV-VNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQ 426

Query: 337 IF----KACLRKSPLAKDIDLSALAKYTQGF 417
           IF    K     + ++ D++L+ LA  T+ F
Sbjct: 427 IFDIQTKKMRENNMMSDDVNLAELAALTKNF 457

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GPE+L+ + GE+E NVR++F  A          S   V+ FDE+D+I  +          
Sbjct: 284 GPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAIC-KSRGSTRDGTG 342

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLLT++DG+ A   V +IG TNR D++D ALLRPGRL+  + I LPD   R Q
Sbjct: 343 VHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQ 402

Query: 337 IFKACLRK----SPLAKDIDLSALAKYTQGF 417
           I +    K    S L  DI+L  LA  T+ +
Sbjct: 403 ILQIHTNKMKENSFLGTDINLQELAARTKNY 433

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GP++L  + GESE+NVR++F  A          S   ++ FDE+D+I  Q          
Sbjct: 364 GPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSV 423

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL++MDG+     + +IG TNR D+ID ALLRPGRL+  + + LPD   R Q
Sbjct: 424 HDTV-VNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQ 482

Query: 337 IFK---ACLRK-SPLAKDIDLSALAKYTQGF 417
           I K   A +R+ + +  ++DL  ++K T+ F
Sbjct: 483 ILKIHTARMREYNKMDPNVDLEDISKRTKNF 513

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 42/82 (51%), Positives = 56/82 (68%)
 Frame = +1

Query: 172 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKAC 351
           LNQ+L EMDG +    V +I ATNRPD++DPAL RPGR D+ + + LPDV  R QI K  
Sbjct: 20  LNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVH 79

Query: 352 LRKSPLAKDIDLSALAKYTQGF 417
           +RK  +A+D+D   LA+ T G+
Sbjct: 80  MRKVSVAQDVDAMTLARGTPGY 101

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 44/130 (33%), Positives = 73/130 (56%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           G   + +R++F  A+ ++PC++F DE+DS+                  +NQLL EMDG  
Sbjct: 241 GLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHPFANQT--INQLLAEMDGFQ 298

Query: 208 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDL 387
           +K+ + ++GATN+ +++D ALLRPGR D  I++  P  + R  +    L+K     +ID+
Sbjct: 299 SKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDI 358

Query: 388 SALAKYTQGF 417
             LA  T G+
Sbjct: 359 EKLAHGTVGY 368

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 83.2 bits (204), Expect(2) = 3e-18
 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  +P  +F DE+DSI ++                 +LL 
Sbjct: 278 LTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKA--ELLV 335

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ + 
Sbjct: 336 QMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRI 393

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  LA D+DL+++A+  +G+
Sbjct: 394 SLRELELADDVDLASIAENMEGY 416



 Score = 27.3 bits (59), Expect(2) = 3e-18
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADIT +C+ A   A+R  IE
Sbjct: 417 SGADITNVCRDASLMAMRRRIE 438

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GP++L  + GESEANVR +F +A          S   ++ FDE+D+I  Q          
Sbjct: 287 GPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGV 346

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLLT++DG++    + +IG TNR D+ID ALLRPGRL+  + I LP+   R Q
Sbjct: 347 HDTV-VNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQ 405

Query: 337 IFKACLRK----SPLAKDIDLSALAKYTQGF 417
           I     ++    + +  D+D   +A  T+ F
Sbjct: 406 ILNIHTKRMREFNKINDDVDNKEIAALTKNF 436

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 84.3 bits (207), Expect(2) = 7e-18
 Identities = 43/132 (32%), Positives = 74/132 (56%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+     R+IF  A  +AP ++F DE+D+I T+               + +
Sbjct: 249 GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 308

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
           LL ++DG + +  V +I ATN+ + +DPAL+RPGR+D+ I    PD+ ++ +I      K
Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 368

Query: 361 SPLAKDIDLSAL 396
             L++D++L  L
Sbjct: 369 MNLSEDVNLETL 380



 Score = 25.0 bits (53), Expect(2) = 7e-18
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 401 STPKDSSGADITEICQRACKYAIRE 475
           +T  D SGADI  +C  A   A+RE
Sbjct: 382 TTKDDLSGADIQAMCTEAGLLALRE 406

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 81.3 bits (199), Expect(2) = 1e-17
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  +P  +F DE+DSI ++                 +LL 
Sbjct: 278 LTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKA--ELLV 335

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ + 
Sbjct: 336 QMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRI 393

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  LA D++L+++A+  +G+
Sbjct: 394 SLRELELADDVNLASIAENMEGY 416



 Score = 27.3 bits (59), Expect(2) = 1e-17
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADIT +C+ A   A+R  IE
Sbjct: 417 SGADITNVCRDASLMAMRRRIE 438

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 81.3 bits (199), Expect(2) = 1e-17
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  +P  +F DE+DSI ++                 +LL 
Sbjct: 278 LTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRMKA--ELLV 335

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ + 
Sbjct: 336 QMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRI 393

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  LA D++L+++A+  +G+
Sbjct: 394 SLRELELADDVNLASIAENMEGY 416



 Score = 27.3 bits (59), Expect(2) = 1e-17
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADIT +C+ A   A+R  IE
Sbjct: 417 SGADITNVCRDASLMAMRRRIE 438

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXX 156
           GP++L  + GESEAN+R +F +A          S   ++ FDE+D+I  +          
Sbjct: 292 GPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAIC-KARGSVAGNSG 350

Query: 157 XXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQ 336
                +NQLL ++DG+     + +IG TNR D+ID ALLRPGRL+  + I LP+   R Q
Sbjct: 351 VHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQ 410

Query: 337 IFKACLRK----SPLAKDIDLSALAKYTQGF 417
           I     ++    + +A D+D + +A  T+ F
Sbjct: 411 ILNIHTKRMRDFNKIASDVDNNEIAAKTKNF 441

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 85.9 bits (211), Expect(2) = 4e-17
 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + W GESE  VR +FD AR  AP  +F DE+DS+                   ++LL 
Sbjct: 308 LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVK--SELLV 365

Query: 190 EMDGMN--------AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFK 345
           ++DG++        ++K V ++ ATN P  ID AL R  RL++ IYIPLPD +SR  +  
Sbjct: 366 QVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALIN 423

Query: 346 ACLRKSPLAKDIDLSALAKYTQGF 417
             LR   +A D+++  +A+ T+G+
Sbjct: 424 INLRTVEVASDVNIEDVARRTEGY 447



 Score = 20.8 bits (42), Expect(2) = 4e-17
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SG D+T +C+ A    +R  I
Sbjct: 448 SGDDLTNVCRDASMNGMRRKI 468

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 80.1 bits (196), Expect(2) = 7e-17
 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  AP  +F DE+DSI ++                ++LL 
Sbjct: 275 LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLI 332

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ K 
Sbjct: 333 QMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKI 390

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  L  DI L  +A+ T+G+
Sbjct: 391 SLREVELDPDIHLEDIAEKTEGY 413



 Score = 25.8 bits (55), Expect(2) = 7e-17
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SGADIT IC+ A   A+R  I
Sbjct: 414 SGADITNICRDASLMAMRRRI 434

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 77.8 bits (190), Expect(2) = 1e-16
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  AP  +F DE+DSI ++                 +LL 
Sbjct: 275 LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLV 332

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ + 
Sbjct: 333 QMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRI 390

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            L++  LA D+++  +A+   G+
Sbjct: 391 NLKELELADDVNIECIAENMDGY 413



 Score = 27.3 bits (59), Expect(2) = 1e-16
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIE 484
           SGADIT +C+ A   A+R  IE
Sbjct: 414 SGADITNVCRDASLMAMRRRIE 435

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 79.0 bits (193), Expect(2) = 2e-16
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  AP  +F DE+DSI ++                ++LL 
Sbjct: 275 LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLI 332

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ K 
Sbjct: 333 QMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKI 390

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  L  D+ L  +A  T+G+
Sbjct: 391 SLREVELDPDVHLEDIADKTEGY 413



 Score = 25.8 bits (55), Expect(2) = 2e-16
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SGADIT IC+ A   A+R  I
Sbjct: 414 SGADITNICRDASLMAMRRRI 434

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
 Frame = +1

Query: 1   GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           G EL+  + G+    VR++F+ A   +P ++F DE+D+I T+               + +
Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE 317

Query: 181 LLTEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
           LL ++DG + +++ + +I ATNR   +DPAL+RPGR+D+ I    PD  ++ +IF     
Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377

Query: 358 KSPLAKDIDLSAL 396
           K  L +D++L  L
Sbjct: 378 KMNLGEDVNLEEL 390

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L + W G+SE  VR +F+ AR  AP ++F DE+D++  Q                ++ L
Sbjct: 261 DLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVK--SEFL 318

Query: 187 TEMDGMNAK---KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR 357
            +MDG   K   + VF++ ATN P  +D AL R  R ++ I+IPLPD+D+R ++ +  + 
Sbjct: 319 VQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSME 376

Query: 358 KSPLAKDIDLSALAKYTQGF 417
            +P + +I+   LA  T+GF
Sbjct: 377 GTPKSDEINYDDLAARTEGF 396

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 77.4 bits (189), Expect(2) = 6e-16
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GESE  VR +F+ AR  AP  +F DE+DSI ++                ++LL 
Sbjct: 277 LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLI 334

Query: 190 EMDGMNA-------KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
           +MDG+          K V ++ ATN P  ID AL R  RL++ IYIPLP    R ++ K 
Sbjct: 335 QMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKI 392

Query: 349 CLRKSPLAKDIDLSALAKYTQGF 417
            LR+  L  DI L  +A+  +G+
Sbjct: 393 NLREVELDPDIQLEDIAEKIEGY 415



 Score = 25.4 bits (54), Expect(2) = 6e-16
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SGADIT +C+ A   A+R  I
Sbjct: 416 SGADITNVCRDASLMAMRRRI 436

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 46/138 (33%), Positives = 73/138 (52%)
 Frame = +1

Query: 4   PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 183
           PEL+    G++   +RE++ +A  SAPC++F DELD+I                  +N L
Sbjct: 188 PELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIG--LSREYQSLRGDVSEVVNAL 245

Query: 184 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
           LTE+DG+   + V  I ATN P ++DPA+    R ++ I   LP+ + R +I +   +K 
Sbjct: 246 LTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKKM 303

Query: 364 PLAKDIDLSALAKYTQGF 417
           PL    +L    + T+GF
Sbjct: 304 PLPVKANLKEFVEKTKGF 321

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 73.6 bits (179), Expect(2) = 2e-14
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           ++  W+GES   V  +F  A    PC++F DE+DS   +                 + +T
Sbjct: 162 IMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSSTDHEVTATLKA---EFMT 218

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
             DG+     V IIGATNR + ID A LR  RL +   + LP  D R++I    L+ + L
Sbjct: 219 LWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKL 276

Query: 370 AKD-IDLSALAKYTQGF 417
            +D  DL  +A  T+GF
Sbjct: 277 DEDEFDLQLIADNTKGF 293



 Score = 23.9 bits (50), Expect(2) = 2e-14
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 410 KDSSGADITEICQRACKYAIRENIEK 487
           K  SG+D+ E+C+ A   A +E I++
Sbjct: 291 KGFSGSDLKELCREAALDAAKEYIKQ 316

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  VR++F+ AR   P ++F DE+DS+                    + L
Sbjct: 197 DLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLC---GSRSEGESESSRRIKTEFL 253

Query: 187 TEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M+G+   ++ V ++GATN P  +D A+ R  R ++ IYIPLP+  +R ++F+  + K 
Sbjct: 254 VQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKI 311

Query: 364 PL-AKDIDLSALAKYTQGF 417
           P      D   LAK T G+
Sbjct: 312 PSELTSQDFKELAKMTDGY 330

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  V+ +F+ AR   P ++F DE+DS+                    + L
Sbjct: 196 DLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLC---GSRNENESEAARRIKTEFL 252

Query: 187 TEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M G+ N      ++GATN P ++D A+ R  R ++ IYIPLP+  +R Q+F+  L  +
Sbjct: 253 VQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGST 310

Query: 364 P-LAKDIDLSALAKYTQGF 417
           P    D ++  LA+ T+G+
Sbjct: 311 PHNLTDANIHELARKTEGY 329

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  V+ +F+ AR   P ++F DE+DS+                    + L
Sbjct: 196 DLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLC---GSRNENESEAARRIKTEFL 252

Query: 187 TEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M G+ N      ++GATN P ++D A+ R  R ++ IYIPLP+  +R Q+F+  L  +
Sbjct: 253 VQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGST 310

Query: 364 P-LAKDIDLSALAKYTQGF 417
           P    D ++  LA+ T+G+
Sbjct: 311 PHNLTDANIHELARKTEGY 329

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 67.4 bits (163), Expect(2) = 2e-13
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L   W+GES+     +F  A    PC++F DE+DS                     Q ++
Sbjct: 165 LTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKA---QFMS 221

Query: 190 EMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
             DG++      V ++GATNRP  +D A+LR  R+    ++ LP+   R +I +  L   
Sbjct: 222 LWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGE 279

Query: 364 PLAKDIDLSALAKYTQGF 417
            L+  I+L  +A  ++G+
Sbjct: 280 NLSNAINLKEIASQSEGY 297



 Score = 26.9 bits (58), Expect(2) = 2e-13
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEK 487
           SG+D+ E+C+ A  Y +R+ + K
Sbjct: 298 SGSDLKELCRDAAMYRVRDYVRK 320

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  V+++F  AR + P ++F DE+D++                    +LL
Sbjct: 201 DLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDAL---TGTRGEGESEASRRIKTELL 257

Query: 187 TEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M+G+ N  + V ++GATN P  +D A+ R  R ++ IYIPLPD+ +R  +F+  +  +
Sbjct: 258 VQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDT 315

Query: 364 P--LAKDIDLSALAKYTQGF 417
           P  L K+ D   L   T+G+
Sbjct: 316 PCVLTKE-DYRTLGAMTEGY 334

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 72.4 bits (176), Expect = 6e-13
 Identities = 42/129 (32%), Positives = 64/129 (49%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           G+    + E+++ A  +AP V+F DE+D+I                  +N LLTEMDG+N
Sbjct: 199 GDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRGDVSEV--VNALLTEMDGIN 256

Query: 208 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDL 387
               V  IGATN P+++D A+    R ++ I   LP  D R  + +  +   PL  D  +
Sbjct: 257 QNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSV 314

Query: 388 SALAKYTQG 414
             L K T+G
Sbjct: 315 DKLVKLTKG 323

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 64/128 (50%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           G+    + E+++ A  +AP V+F DE+D+I                  +N LLTEMDG+N
Sbjct: 199 GDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRGDVSEV--VNALLTEMDGIN 256

Query: 208 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDL 387
               V  IGATN P+++D A+    R ++ I   LPD + R  + +  +   PL  D  +
Sbjct: 257 QNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPV 314

Query: 388 SALAKYTQ 411
             L K T+
Sbjct: 315 DKLVKLTR 322

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  V+ +F  AR + P ++F DE+DS+                    + L
Sbjct: 203 DLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC---GSRSENESEAARRIKTEFL 259

Query: 187 TEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M G+      + ++GATN P ++D A+ R  R ++ IYIPLP+  +R  +F+  L  +
Sbjct: 260 VQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGST 317

Query: 364 PLA-KDIDLSALAKYTQGF 417
             +  + D   L + T G+
Sbjct: 318 QNSLTEADFQELGRKTDGY 336

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 186
           +L++ W GESE  V+ +F  AR + P ++F DE+DS+                    + L
Sbjct: 203 DLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC---GSRSENESEAARRIKTEFL 259

Query: 187 TEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKS 363
            +M G+      + ++GATN P ++D A+ R  R ++ IYIPLP+  +R  +FK  L  +
Sbjct: 260 VQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTT 317

Query: 364 PLA-KDIDLSALAKYTQGF 417
             +  + D   L + T G+
Sbjct: 318 QNSLTEADFRELGRKTDGY 336

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 67.4 bits (163), Expect(2) = 4e-12
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLT-MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           P  LT  W+GES+     +F  A    P ++F DE+DS                     Q
Sbjct: 163 PSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---Q 219

Query: 181 LLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
            ++  DG++      V I+GATNRP  +D A+LR  R+    +I  P+V  R  I K  L
Sbjct: 220 FMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLIL 277

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
               +   ++LS +AK T GF
Sbjct: 278 ENENVESAVELSEIAKQTDGF 298



 Score = 22.3 bits (46), Expect(2) = 4e-12
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENIEKD 490
           SG+D+ E+C+ A    +R+ + ++
Sbjct: 299 SGSDLREMCRDAALLCVRDFVHQE 322

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXX-------------- 165
           G + A V ++F + +  +PC+L+ DE+DSIA +                           
Sbjct: 420 GVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQ 479

Query: 166 ----XXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRH 333
                 L Q L  MDG   +  + IIGATNR + +D A++RPGR D+ I    P  + R 
Sbjct: 480 KPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERK 539

Query: 334 QIFKACLRKS-PLAKDIDLSALAKYTQGFKRC 426
            I +  LR +  L  D   + +A+ + G   C
Sbjct: 540 DILRIFLRNTKALVDDTTKTMMAERSIGLNGC 571

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLT-MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           P  LT  W+GES+     +F  A    P ++F DE+DS                     Q
Sbjct: 159 PSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---Q 215

Query: 181 LLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
            ++  DG++   +  V ++GATNRP  +D A++R  R+    +I  P +  R  I K  L
Sbjct: 216 FMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLIL 273

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           +   + + +DL  +A+ T GF
Sbjct: 274 KNENVDRHVDLLEVAQETDGF 294



 Score = 22.7 bits (47), Expect(2) = 4e-11
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SG+D+ E+C+ A    +RE +
Sbjct: 295 SGSDLKEMCRDAALLCVREYV 315

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLT-MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           P  LT  W+GES+     +F  A    P ++F DE+DS                     Q
Sbjct: 159 PSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---Q 215

Query: 181 LLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
            ++  DG++   +  V ++GATNRP  +D A++R  R+    +I  P +  R  I K  L
Sbjct: 216 FMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLIL 273

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           +   + + +DL  +A+ T GF
Sbjct: 274 KNENVDRHVDLLEVAQETDGF 294



 Score = 22.7 bits (47), Expect(2) = 4e-11
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SG+D+ E+C+ A    +RE +
Sbjct: 295 SGSDLKEMCRDAALLCVREYV 315

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 4   PELLT-MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 180
           P  LT  W+GES+     +F  A    P ++F DE+DS                     Q
Sbjct: 159 PSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---Q 215

Query: 181 LLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
            ++  DG++   +  V ++GATNRP  +D A++R  R+    +I  P +  R  I K  L
Sbjct: 216 FMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLIL 273

Query: 355 RKSPLAKDIDLSALAKYTQGF 417
           +   + + +DL  +A+ T GF
Sbjct: 274 KNENVDRHVDLLEVAQETDGF 294



 Score = 22.7 bits (47), Expect(2) = 4e-11
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 SGADITEICQRACKYAIRENI 481
           SG+D+ E+C+ A    +RE +
Sbjct: 295 SGSDLKEMCRDAALLCVREYV 315

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           GESEA VR++   A   +PC+L+ DE+D   T                     T +  ++
Sbjct: 317 GESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFG-----TFITWLS 371

Query: 208 AKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            KK+ VF++   N  D + P LLR GR D++ +I LPD+  R  IFK  L+K
Sbjct: 372 EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKK 423

---

>MSP1_CAEEL (P54815) Protein MSP1 homolog|
          Length = 342

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L   W+GES+     +F  A+   P ++F DE+DS                     Q +T
Sbjct: 153 LTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSHDHESTAMMKA---QFMT 209

Query: 190 EMDGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSP 366
             DG ++    + ++GATNRP  +D A+LR  R+     +P+P+   R QI    LR   
Sbjct: 210 LWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRNEK 267

Query: 367 LAKDIDLSALAKYTQG 414
           +   ++L  +A+  +G
Sbjct: 268 INNTVNLGEIAQAAEG 283

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GE E  VR +F  AR   P ++F DE+DS+  +                 + L 
Sbjct: 411 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLI 467

Query: 190 EMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFK--ACLR 357
           E DG+ +     V ++GATNRP  +D A+LR  R  + +Y+ LP+ ++R  + K   C +
Sbjct: 468 EFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQ 525

Query: 358 KSPLAKDIDLSALAKYTQGF 417
            SPL +  +L+ LA+ T G+
Sbjct: 526 GSPLTQK-ELAQLARMTDGY 544

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 33/82 (40%), Positives = 50/82 (60%)
 Frame = +1

Query: 172  LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKAC 351
            L+QLL E+DG+  +  V I GATNRP+++DPALLRPGR D+++ + LP    R +I +  
Sbjct: 1155 LSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFY 1214

Query: 352  LRKSPLAKDIDLSALAKYTQGF 417
             +     K +  +   + T GF
Sbjct: 1215 GQTLGYQKTMPWAYFGERTVGF 1236



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
 Frame = +1

Query: 28   GESEA-NVREIFDKARGSAPCVLFFDELDSIATQ 126
            GES A  ++ +F +AR  APC++F DE+D+++++
Sbjct: 1047 GESAAFKLQLVFQEARQLAPCIVFIDEIDTLSSK 1080

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L + + GE E  VR +F  AR   P ++F DE+DS+  +                 + L 
Sbjct: 409 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLI 465

Query: 190 EMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFK--ACLR 357
           E DG+ +     V ++GATNRP  +D A+LR  R  + +Y+ LP+ ++R  + K   C +
Sbjct: 466 EFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQ 523

Query: 358 KSPLAKDIDLSALAKYTQGF 417
            SPL +  +L+ LA+ T G+
Sbjct: 524 GSPLTQK-ELAQLARMTDGY 542

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           LL+ + GESE  VR +F  A+  +P ++F DE+DS+ T                L    +
Sbjct: 540 LLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIKTELLIQWS 599

Query: 190 EMDGMNAK---------KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIF 342
            +    A+           V ++GATN P  ID A  R  R  + +YIPLPD ++R    
Sbjct: 600 SLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHL 657

Query: 343 KACLRKSPLA-KDIDLSALAKYTQGF 417
           K  + K   + +D+D   + + T+GF
Sbjct: 658 KRLMAKQKNSLQDLDYELITEMTEGF 683

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           GESE+ +R++ D A   +PC+L+ DE+D   +                 N++L       
Sbjct: 301 GESESRLRQMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTS------NRVLATFISWL 354

Query: 208 AKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLR--KSPLAK 375
           ++KT  VF++   N  D++   ++R GR D++ ++ LP+++ R +IFK  ++  +    K
Sbjct: 355 SEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWK 414

Query: 376 DIDLSALAKYTQGF 417
             D   LA+ ++ F
Sbjct: 415 LFDYKKLAQLSESF 428

---

>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL|
          Length = 330

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 39/123 (31%), Positives = 61/123 (49%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 189
           L++ + GE+  N+R+ F+ AR   PCVLFFDE D++A                 +N LL 
Sbjct: 154 LISSYLGETATNIRKTFEFAR-KQPCVLFFDEFDALA--RTRDDSGEHNELRRVVNSLLL 210

Query: 190 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPL 369
            +D M  K   F+I ATN    +D A+ R  R D++++   P+     +  K   +  P+
Sbjct: 211 FIDNMQPKG--FLIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPV 266

Query: 370 AKD 378
           A D
Sbjct: 267 AFD 269

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 27/61 (44%), Positives = 37/61 (60%)
 Frame = +1

Query: 220 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALA 399
           V ++  TNRPD++DPAL+RPGR  + IY   P +  R  IFK  LR   L K ++   LA
Sbjct: 1   VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60

Query: 400 K 402
           +
Sbjct: 61  R 61

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +1

Query: 28  GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 207
           GESE+ +RE+   A G +PCVL+ DE+D   +                     T +  ++
Sbjct: 301 GESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDSGTSARVFG-----TFITWLS 355

Query: 208 AKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRK 360
            K T VF++   N    +   +LR GR D++ ++ LP+ + R  IF+  L +
Sbjct: 356 EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLAR 407

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
 Frame = +1

Query: 10   LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXX------------------ 135
            L + + GESE  VR +F  A+  +P ++F DE+DSI                        
Sbjct: 674  LTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQW 733

Query: 136  XXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 315
                         N   ++ +G      V ++ ATN P  ID A  R  R  +  YIPLP
Sbjct: 734  SSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLP 791

Query: 316  DVDSRHQIFKACL-RKSPLAKDIDLSALAKYTQGF 417
            +  +RH  FK  L  +     + D   L K T+G+
Sbjct: 792  EDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGY 826

---

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 4    PELLT-MWFG---ESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXX 171
            P+++T  W     ES   +    D A+  +PC+++   +  +                  
Sbjct: 1438 PDVITESWMNILIESLRRLNLTLDFAKKMSPCIIWIQNIHQLNVNRLTQNVESDPTFLLG 1497

Query: 172  LNQLLTEMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKA 348
            +     + D    KK  + +IG+T+ P  +DPAL+ P RLD++I + L ++  R + F  
Sbjct: 1498 ILLKYFQTDFSKTKKNNIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPL 1557

Query: 349  CLRK 360
             L+K
Sbjct: 1558 LLKK 1561

---

>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic|
            region (ORF2971) (ORFB)
          Length = 2971

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
 Frame = +1

Query: 172  LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP------LPDVDSRH 333
            +  LL  +D + + K   +   T+ P ++DPAL RPGRLD+ I +P      + +    +
Sbjct: 2296 ITDLLVIIDSVRSNKGFVVFATTDIPHVLDPALRRPGRLDETICLPNIHTSNILNFTKNY 2355

Query: 334  QIFKACLRKSPLAKDIDLSALAKYT 408
            +IFK+    S   K I L+ +   T
Sbjct: 2356 EIFKSAKDTSNFGKKIILNEMQNLT 2380

---

>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
 Frame = +1

Query: 4    PELLT-MWFG---ESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXX--XXXXX 165
            P+++T  W     ES   +  I + A+  +PC+++  ++  +                  
Sbjct: 1692 PDVITESWINILMESLQRLTLILELAKKMSPCIIWIQDIHELNVNRSTENVESDPTFLLG 1751

Query: 166  XXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFK 345
              L    TE    + K  + IIG+T+ P  +DPAL+ P RLD+L+ I + D+  R + F 
Sbjct: 1752 ILLKYFHTEFISKSTKG-IIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFS 1810

Query: 346  ACL 354
              L
Sbjct: 1811 ILL 1813

---

>PCH2_YEAST (P38126) Pachytene checkpoint protein 2|
          Length = 536

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIF---------DKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXX 159
           + + WFGES  N+  +F         ++ RG   C+L  DE+++IA ++           
Sbjct: 360 IFSKWFGESSKNISIVFKDIEELLKVNEGRGIFICLL-IDEVEAIASSRTNLSSRNESTD 418

Query: 160 XXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQI 339
               +N LLT++D +        +  +N  D +D A +   R D + Y+  P  +    I
Sbjct: 419 GIRVVNTLLTQLDRLKKYHNFLALATSNLLDSLDDAFV--DRADGVFYVGNPTAEGILHI 476

Query: 340 FKACLRK 360
            K C+ +
Sbjct: 477 LKVCIEE 483

---

>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 30/101 (29%), Positives = 46/101 (45%)
 Frame = +1

Query: 88  VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPA 267
           V+  +++DS A Q                + LL  +DG+ +     I   TN P+ +DPA
Sbjct: 297 VVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPA 355

Query: 268 LLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLS 390
           L+RPGR+D   Y+     +   ++F      SP   D DLS
Sbjct: 356 LVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMAD-DLS 395

---

>YCF2_PSINU (Q8WHW9) Protein ycf2|
          Length = 2313

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
 Frame = +1

Query: 28   GESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTEMDGM 204
            GES   +   F+  +  +PC+++  ++  +   +               L + L+     
Sbjct: 1652 GESVRRLTLTFELVKRMSPCIVWIQDIHELNLDRVMNELEVDPKYLFCSLLKCLSNNSSN 1711

Query: 205  NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDID 384
               +   II  T+ P  +DP+ + P RLDQLI I   ++  R + F A LR        D
Sbjct: 1712 YYVRNNIIIAPTHIPSKVDPSFISPNRLDQLINIRRLNIHQREREFLALLRVKGFYYKGD 1771

Query: 385  LS---ALAKYTQGFKR 423
            LS    L   T+G+ +
Sbjct: 1772 LSHLGELGSITRGYSK 1787

---

>YCF2_PINTH (P41653) Protein ycf2|
          Length = 2054

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
 Frame = +1

Query: 67   ARGSAPCVLFFDELDSI----ATQXXXXXXXXXXXXXXXLNQLLTEMDG-MNAKKTVFII 231
            A+  +PC+++   +  +    AT                +N L    DG  ++ + + +I
Sbjct: 1441 AKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEKDSMRNILVI 1500

Query: 232  GATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACL 354
             +T+ P  +DPAL+ P RLD+ I I +  +  R + F   L
Sbjct: 1501 ASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILL 1541

---

>YCF2_PINKO (Q85WV5) Protein ycf2|
          Length = 1320

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
 Frame = +1

Query: 58   FDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAK---KTVFI 228
            F+ A+  +PC+++   +  +                  L  LL  +     K   + +  
Sbjct: 692  FELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGEKDSIRNILF 751

Query: 229  IGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLS 390
            I +T+ P  +DPAL+ P RLD  I I +  +  R + F   L    L  + ++S
Sbjct: 752  IASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEVS 805

---

>YCF2_PHYPA (P61243) Protein ycf2|
          Length = 2259

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
 Frame = +1

Query: 4    PELLT-MWFG---ESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXX 171
            P++LT  W     ES   +  I + A   +PC+++   +  +                  
Sbjct: 1590 PDILTESWINILMESLRRLNLILELAEKLSPCIIWMPNIHELNVNRSTQNVESDPTFLLG 1649

Query: 172  LNQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYI 306
            +  L     G + K T  + IIG+T+ P  +DPAL+ P RLD+LI I
Sbjct: 1650 IF-LKYFQTGFSKKNTNNIIIIGSTHLPKKVDPALISPNRLDRLINI 1695

---

>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1|
          Length = 456

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 306
           LL  +DG+ + +       TN P+ +D A++RPGR+D  +++
Sbjct: 345 LLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386

---

>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)|
          Length = 419

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 306
           LL  +DG+ + +   +   TN  D +DPAL+RPGR+D   Y+
Sbjct: 312 LLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353

---

>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2|
          Length = 424

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
 Frame = +1

Query: 10  LLTMWFGESEANVREIFDKARGSA---PCVLF--FDELDSIA-TQXXXXXXXXXXXXXXX 171
           L + WF ES   V+++FD+    A    C++F   DE++S+   +               
Sbjct: 217 LFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRA 276

Query: 172 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVDSRHQIFKAC 351
           +N LLT++D +  +  V I+  +N    +D AL+   R D +  +  P   +R+ + K+ 
Sbjct: 277 VNALLTQIDRIRRRDNVLILCTSNLESTLDKALV--DRADIVKNVGQPSDFARYSMLKSS 334

Query: 352 L 354
           +
Sbjct: 335 I 335

---

>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 419

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 306
           LL  +DG+ + +   +   TN  D +DPAL+RPGR+D   Y+
Sbjct: 312 LLNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYV 353

---

>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 418

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 306
           LL  +DG+ + +   +   TN  D +DPAL+RPGR+D   Y+
Sbjct: 312 LLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVDLKEYV 353

---

>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 420

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +1

Query: 181 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 306
           LL  +DG+ + +   +   TN  + +DPAL+RPGR+D   Y+
Sbjct: 313 LLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVDLKQYV 354

---

>YCF2_ADICA (Q85B60) Protein ycf2|
          Length = 2104

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 31   ESEANVREIFDKARGSAPCVLFFDELD--SIATQXXXXXXXXXXXXXXXLNQLLTEMDGM 204
            ES   +  +F+ A+  +PC L+  ++   +I                  L  +  ++   
Sbjct: 1443 ESVHRLNIVFEIAKEMSPCTLWIQDIHELNICRSYNKLEADPKFLLCQILKSIGHKLGNS 1502

Query: 205  NAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 300
            + ++ V +I  T+ P  IDPAL+ P RL+QLI
Sbjct: 1503 DIRENV-VIATTHVPARIDPALVAPNRLNQLI 1533

---

>GATB_MYCTU (P64199) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 509

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -3

Query: 366 RRLPEASFEDLVPRVDIRKRDVDKLIKTPWPKKGRVDDVWPVGSTNDEDSLLGVHAIHLS 187
           R  PE   E + P  ++ +R    + + PW  + R+   W V      D L+   A+ L 
Sbjct: 303 RYFPEPDLEPVAPSRELVERLRQTIPELPWLSRRRIQQEWGVSDEVMRD-LVNAGAVELV 361

Query: 186 QQLVQHSISGTSS 148
              V+H  S  ++
Sbjct: 362 AATVEHGASSEAA 374

---

>GATB_MYCBO (P64200) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 509

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = -3

Query: 366 RRLPEASFEDLVPRVDIRKRDVDKLIKTPWPKKGRVDDVWPVGSTNDEDSLLGVHAIHLS 187
           R  PE   E + P  ++ +R    + + PW  + R+   W V      D L+   A+ L 
Sbjct: 303 RYFPEPDLEPVAPSRELVERLRQTIPELPWLSRRRIQQEWGVSDEVMRD-LVNAGAVELV 361

Query: 186 QQLVQHSISGTSS 148
              V+H  S  ++
Sbjct: 362 AATVEHGASSEAA 374

---

>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)|
           (Rev-interacting protein) (Rev/Rex activation
           domain-binding protein)
          Length = 562

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 221 SSSLVLPTGQTSSTLPFL-GQGVLISLSTSLFLMSTRGTRSSKLASGSLLWP 373
           SSS+  P G T ST PF+   G  ++ ST+ F  + RG  ++   + S+  P
Sbjct: 420 SSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMP 471

---

>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 562

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 221 SSSLVLPTGQTSSTLPFL-GQGVLISLSTSLFLMSTRGTRSSKLASGSLLWP 373
           SSS+  P G T ST PF+   G  ++ ST+ F  + RG  ++   + S+  P
Sbjct: 420 SSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMP 471


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,144,710
Number of Sequences: 219361
Number of extensions: 1364617
Number of successful extensions: 4313
Number of sequences better than 10.0: 261
Number of HSP's better than 10.0 without gapping: 3932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4157
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---