ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15n05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 545 bits (275), Expect = e-152 Identities = 438/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1767 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 1826 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 1827 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 1886 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1887 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 1946 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1947 ttgttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctact 2006 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2007 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 2066 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 2067 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 2126 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 2127 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 2185 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2186 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 2245 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 2246 tgaaaaggaca 2256
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 537 bits (271), Expect = e-149 Identities = 437/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 319 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 378 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 379 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 438 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 439 acccagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccag 498 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||||||||| ||||||||||| ||||| || | ||||| ||||||||||| Sbjct: 499 ttgttgactgagatggacggcatgaacgcgaagaaaaccatgttcattattggtgctact 558 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||||||||| ||||| ||||||||| | || ||||||||||||||||||||||||||| Sbjct: 559 aacaggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatc 618 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 ||||| ||||| ||||||| | || |||| ||||||||||||||||||||| ||||| Sbjct: 619 tacattcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaag 678 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || Sbjct: 679 tcacctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-ag 737 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 738 tggtgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacat 797 Query: 481 tgagaaggaca 491 ||| ||||||| Sbjct: 798 tgaaaaggaca 808
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 416 bits (210), Expect = e-113 Identities = 418/486 (86%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 759 cctgaactgcttaccatgtggtttggtgagagtgaggccaatgtccgtgagatttttgac 818 Query: 64 aaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacc 123 ||||||||| ||| || |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 819 aaggctaggcagtctgctccatgtgtcctcttttttgatgagctcgactccattgctact 878 Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||||||||||||||| || || || ||||| |||||||| ||| ||||||||||| Sbjct: 879 cagagaggaagcagtgttggtgacgccggtggtgctgctgatagggtgttgaaccagctg 938 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 || |||||||||||||||||||| ||||||||||| || || || || ||||| || ||| Sbjct: 939 cttactgagatggatggcatgaatgccaagaagacggtttttattatcggtgcaactaac 998 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 || || |||||||| ||||| ||| | || ||||| ||||||||||||||||||||||| Sbjct: 999 agaccggacatcattgacccagccttgctgaggcctgggcgtcttgatcagcttatctat 1058 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||| || |||| | || |||| |||||||||||||| || |||||||||||| Sbjct: 1059 attcctctgcccgatgagcagtccaggcttcagatcttcaaagcctgtctcaggaagtct 1118 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| ||||||||||| |||| | | |||||| ||||| |||||||| || ||| ||||| Sbjct: 1119 cctgtggccaaggatgttgacttgaatgctctcgccaaatacacccagggtttc-agcgg 1177 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| |||||||| || || |||||||| || |||||||| ||||||||||||||||| || Sbjct: 1178 tgcagatatcacagagatctgccagcgcgcgtgcaagtatgccatcagggagaacatcga 1237 Query: 484 gaagga 489 |||||| Sbjct: 1238 gaagga 1243
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 361 bits (182), Expect = 1e-96 Identities = 411/486 (84%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||| |||||||||||||||||||||||||||| || || || || || || ||||| Sbjct: 1147 cctgagttgcttaccatgtggtttggtgagagtgaagccaacgtccgcgaaatttttgat 1206 Query: 64 aaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacc 123 |||||| | || || || ||||||||||||||||||||||||||||| ||||| || Sbjct: 1207 aaggctcgtcaatctgctccttgtgtcctcttctttgatgagcttgactcaattgcgact 1266 Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 ||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||||| Sbjct: 1267 cagagaggaagtagtgtgggtgatgctggaggtgcggctgatagagtgcttaatcagcta 1326 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||| || ||||||||||||||||||||||| ||||| || || ||||||||||| ||| Sbjct: 1327 ctgacagaaatggatggcatgaacgccaagaaaactgtgtttattattggtgctacaaac 1386 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 ||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 1387 aggcctgacatcattgatcctgctcttctgaggccagggcgtcttgaccagctgatctac 1446 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || || || ||||||| | || |||| |||||||||||| || ||||| |||||||| Sbjct: 1447 attccactgcctgatgagcagtctaggctccagatcttcaaggcctgcctaaggaagtcc 1506 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| |||||| | || || | |||||| || |||||||| ||||| ||| || || Sbjct: 1507 cctgtggcaaaggatgtggacctgaatgctcttgctaagtacacacaagggttc-agtgg 1565 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 || |||||||| ||||||||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 1566 agcagatatcacagaaatttgccagcgtgcgtgcaaatatgcaatcagagagaacattga 1625 Query: 484 gaagga 489 |||||| Sbjct: 1626 gaagga 1631
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 359 bits (181), Expect = 6e-96 Identities = 407/481 (84%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 1685 tgctcaccatgtggtttggagagagtgaagctaatgttcgtgagatatttgacaaggccc 1744 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagag 130 | ||| || |||||||| |||||||| || ||||||||||| |||||||| ||||||| Sbjct: 1745 gccagtctgcgccatgtgtgctcttcttcgacgagcttgactcaattgctactcagagag 1804 Query: 131 gaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactg 190 |||||||||| || |||||||||||||| |||||||| |||||||| |||||| |||| | Sbjct: 1805 gaagcagtgtgggtgatgctggaggtgcagctgatagggtgctgaatcagctgttgacag 1864 Query: 191 agatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccag 250 |||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1865 agatggatggcatgaatgccaagaagactgttttcattattggggctacaaacaggcctg 1924 Query: 251 acatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctc 310 ||||||| || || ||| | ||||||||||||||||| |||||||| |||||||| || | Sbjct: 1925 acatcatagatccggccttgcttaggccagggcgtctcgatcagctgatctacattccac 1984 Query: 311 ttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttgg 370 | ||||||| | || |||| ||| || ||||||||||||||||||||||| ||| ||| Sbjct: 1985 tgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtcccctgtgg 2044 Query: 371 ccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcggtgctgat 430 | |||||| | || | | ||||| ||||||||||||||||| ||| || ||||| ||| Sbjct: 2045 cgaaggatgtggacttgaacgctcttgccaagtacacccaaggcttc-agtggtgcagat 2103 Query: 431 atcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaaggac 490 || || ||||| || |||||||| ||||| || || || || |||||||| ||||||||| Sbjct: 2104 attacagaaatctgtcagcgtgcatgcaaatatgcgattagagagaacatcgagaaggac 2163 Query: 491 a 491 | Sbjct: 2164 a 2164
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 351 bits (177), Expect = 1e-93 Identities = 319/365 (87%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| || Sbjct: 2835089 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 2835030 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 2835029 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 2834970 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||||||| ||||| ||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 2834969 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 2834910 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 2834909 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 2834850 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || || Sbjct: 2834849 cctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-agtgg 2834791 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2834790 tgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacattga 2834731 Query: 484 gaagg 488 |||| Sbjct: 2834730 aaagg 2834726 Score = 194 bits (98), Expect = 2e-46 Identities = 119/126 (94%) Strand = Plus / Minus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 2835295 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 2835236 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2835235 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 2835176 Query: 121 acccag 126 |||||| Sbjct: 2835175 acccag 2835170
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 351 bits (177), Expect = 1e-93 Identities = 319/365 (87%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| || Sbjct: 2835200 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 2835141 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 2835140 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 2835081 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||||||| ||||| ||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 2835080 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 2835021 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 2835020 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 2834961 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || || Sbjct: 2834960 cctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-agtgg 2834902 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2834901 tgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacattga 2834842 Query: 484 gaagg 488 |||| Sbjct: 2834841 aaagg 2834837 Score = 194 bits (98), Expect = 2e-46 Identities = 119/126 (94%) Strand = Plus / Minus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 2835406 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 2835347 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2835346 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 2835287 Query: 121 acccag 126 |||||| Sbjct: 2835286 acccag 2835281
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 351 bits (177), Expect = 1e-93 Identities = 319/365 (87%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| || Sbjct: 107045 cagagaggaagcagtgttggtgatgccggaggtgctgctgatagagtgctgaaccagttg 106986 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 106985 ttgactgagatggacggcatgaacgcgaagaaaaccgtgttcattattggtgctactaac 106926 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||||||| ||||| ||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 106925 aggccagatatcattgaccctgccttgctaaggccagggcgtcttgatcagcttatctac 106866 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||| ||||||| | || |||| ||||||||||||||||||||| ||||||| Sbjct: 106865 attcctctgcctgatgatcaatctaggctgcagatcttcaaagcttgcctccggaagtca 106806 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| ||||||||||| | || || | |||||| ||||| ||||||||||| ||| || || Sbjct: 106805 cctgtggccaaggatgtagacctgaatgctcttgccaaatacacccaaggtttc-agtgg 106747 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 106746 tgctgatattacagaaatctgccagcgtgcatgcaaatacgccatcagagagaacattga 106687 Query: 484 gaagg 488 |||| Sbjct: 106686 aaagg 106682 Score = 194 bits (98), Expect = 2e-46 Identities = 119/126 (94%) Strand = Plus / Minus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 107251 ggacctgagctgcttaccatgtggtttggtgagagtgaggccaatgtgcgtgagattttt 107192 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 107191 gacaaggctaggcagtcagctccttgtgtcctcttctttgatgagcttgactcaattgct 107132 Query: 121 acccag 126 |||||| Sbjct: 107131 acccag 107126
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 264 bits (133), Expect = 2e-67 Identities = 308/365 (84%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |||||| Sbjct: 15400488 cagagaggaagcagtgtgggtgatgctggaggtgcagctgatagggtgctgaatcagctg 15400547 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 |||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||| ||| Sbjct: 15400548 ttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaac 15400607 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 ||||| |||||||| || || ||| | ||||||||||||||||| |||||||| |||||| Sbjct: 15400608 aggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatctac 15400667 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 15400668 attccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtcc 15400727 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| |||||| | || | | ||||| ||||||||||||||||| ||| || || Sbjct: 15400728 cctgtggcgaaggatgtggacttgaacgctcttgccaagtacacccaaggcttc-agtgg 15400786 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| ||||| || ||||| || |||||||| ||||| || || || || |||||||| || Sbjct: 15400787 tgcagatattacagaaatctgtcagcgtgcatgcaaatatgcgattagagagaacatcga 15400846 Query: 484 gaagg 488 ||||| Sbjct: 15400847 gaagg 15400851 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 15400293 tgctcaccatgtggtttggagagagtgaagctaatgttcgtgagatatttgacaaggccc 15400352 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctac 122 | ||| || |||||||| |||||||| || ||||||||||| |||||||| Sbjct: 15400353 gccagtctgcgccatgtgtgctcttcttcgacgagcttgactcaattgctac 15400404
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 264 bits (133), Expect = 2e-67 Identities = 308/365 (84%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |||||| Sbjct: 117851 cagagaggaagcagtgtgggtgatgctggaggtgcagctgatagggtgctgaatcagctg 117910 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 |||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||| ||| Sbjct: 117911 ttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaac 117970 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 ||||| |||||||| || || ||| | ||||||||||||||||| |||||||| |||||| Sbjct: 117971 aggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatctac 118030 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 118031 attccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtcc 118090 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| |||||| | || | | ||||| ||||||||||||||||| ||| || || Sbjct: 118091 cctgtggcgaaggatgtggacttgaacgctcttgccaagtacacccaaggcttc-agtgg 118149 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| ||||| || ||||| || |||||||| ||||| || || || || |||||||| || Sbjct: 118150 tgcagatattacagaaatctgtcagcgtgcatgcaaatatgcgattagagagaacatcga 118209 Query: 484 gaagg 488 ||||| Sbjct: 118210 gaagg 118214 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 117656 tgctcaccatgtggtttggagagagtgaagctaatgttcgtgagatatttgacaaggccc 117715 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctac 122 | ||| || |||||||| |||||||| || ||||||||||| |||||||| Sbjct: 117716 gccagtctgcgccatgtgtgctcttcttcgacgagcttgactcaattgctac 117767
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 264 bits (133), Expect = 2e-67 Identities = 308/365 (84%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |||||| Sbjct: 15408729 cagagaggaagcagtgtgggtgatgctggaggtgcagctgatagggtgctgaatcagctg 15408788 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 |||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||| ||| Sbjct: 15408789 ttgacagagatggatggcatgaatgccaagaagactgttttcattattggggctacaaac 15408848 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 ||||| |||||||| || || ||| | ||||||||||||||||| |||||||| |||||| Sbjct: 15408849 aggcctgacatcatagatccggccttgcttaggccagggcgtctcgatcagctgatctac 15408908 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || || || ||||||| | || |||| ||| || ||||||||||||||||||||||| Sbjct: 15408909 attccactgcctgatgagcaatctaggctccaaattttcaaagcttgcctcaggaagtcc 15408968 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| |||||| | || | | ||||| ||||||||||||||||| ||| || || Sbjct: 15408969 cctgtggcgaaggatgtggacttgaacgctcttgccaagtacacccaaggcttc-agtgg 15409027 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| ||||| || ||||| || |||||||| ||||| || || || || |||||||| || Sbjct: 15409028 tgcagatattacagaaatctgtcagcgtgcatgcaaatatgcgattagagagaacatcga 15409087 Query: 484 gaagg 488 ||||| Sbjct: 15409088 gaagg 15409092 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 15408534 tgctcaccatgtggtttggagagagtgaagctaatgttcgtgagatatttgacaaggccc 15408593 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctac 122 | ||| || |||||||| |||||||| || ||||||||||| |||||||| Sbjct: 15408594 gccagtctgcgccatgtgtgctcttcttcgacgagcttgactcaattgctac 15408645
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 226 bits (114), Expect = 5e-56 Identities = 394/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||| || || ||||||||||| |||||||| || |||||| | ||||| || ||| Sbjct: 1686 cctgagctcctcacaatgtggtttggagagagtgaagccaatgtgagagagatattcgac 1745 Query: 64 aaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacc 123 ||||| | ||| || || ||||| || |||||||||||||| ||||| || || || Sbjct: 1746 aaggcacgacagtctgccccttgtgttcttttctttgatgagctggactccatcgccact 1805 Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||| | ||||||||| |||||||| ||||| || |||||||| |||||||||| Sbjct: 1806 cagagagggaacagtgttggagatgctggtggtgcagcagatagagtattgaaccagctt 1865 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 || || ||||||||||| ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 1866 cttacggagatggatggaatgaatgctaagaagacggtcttcatcatcggagctacaaac 1925 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 || |||||||| || || ||||| ||||| | || || ||||| |||||||| |||||| Sbjct: 1926 agaccagacattattgatcctgcacttctgcgtcctggtcgtctcgatcagctcatctac 1985 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||||||||||| || || | |||||||||| || ||||| | ||||| || Sbjct: 1986 attcctcttcctgatgaggagtctcgttaccagatctttaagtcttgcttgaggaaatca 2045 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| || ||| |||| || || ||||| || |||||||||||||| ||| || || Sbjct: 2046 cctgtggcgaaagatgttgacctgagggctcttgctaagtacacccaaggcttc-agtgg 2104 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| || ||||| || |||||||||||| |||||||||| || ||||| || ||||| || Sbjct: 2105 tgcggacatcacagagatttgccagcgttcttgcaagtatgcgatcagagaaaacatcga 2164 Query: 484 gaagga 489 |||||| Sbjct: 2165 gaagga 2170
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 224 bits (113), Expect = 2e-55 Identities = 390/481 (81%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 ||||||| |||||||||||||| ||||| |||||||| | || || ||||||||||| | Sbjct: 1700 tgcttacaatgtggtttggtgaaagtgaagctaatgttagagaaatttttgacaaggcca 1759 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagag 130 | || || |||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1760 gacaatcggctccatgtgtcctcttctttgatgagcttgactctattgccactcagagag 1819 Query: 131 gaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactg 190 |||||||||||||||||||||| ||||| ||||||||||| || || || || |||||| Sbjct: 1820 gaagcagtgttggggatgctggtggtgcggctgatagagttctaaatcaacttttgactg 1879 Query: 191 agatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccag 250 | |||||||||||| ||||| |||||||| ||||| ||||| || || ||||| || | Sbjct: 1880 aaatggatggcatgtctgccaaaaagactgtgttcataattggggcaactaacagacctg 1939 Query: 251 acatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctc 310 ||||||| ||||| || |||||| | ||||| ||||| ||||| | ||||| || |||| Sbjct: 1940 acatcattgacccagcacttcttcgaccaggccgtctggatcaattgatctatattcctc 1999 Query: 311 ttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttgg 370 | ||||||| || || |||| || ||||| ||||| ||| | |||||||| ||| | | Sbjct: 2000 tccctgatgaggattcccggcatcaaatctttaaagcctgcttgaggaagtcacctatcg 2059 Query: 371 ccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcggtgctgat 430 | || || ||||| | || || |||| | | |||| ||||| ||| || ||||||||| Sbjct: 2060 caaaaaatgttgatttgagagcattggctaggcacactcaagggttc-agtggtgctgat 2118 Query: 431 atcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaaggac 490 || || ||||| |||||||| || ||||| || ||||| || || ||||| ||||||||| Sbjct: 2119 attacagaaatatgccagcgagcatgcaaatatgccataagagaaaacatagagaaggac 2178 Query: 491 a 491 | Sbjct: 2179 a 2179
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 224 bits (113), Expect = 2e-55 Identities = 390/481 (81%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 ||||||| |||||||||||||| ||||| |||||||| | || || ||||||||||| | Sbjct: 1720 tgcttacaatgtggtttggtgaaagtgaagctaatgttagagaaatttttgacaaggcca 1779 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagag 130 | || || |||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1780 gacaatcggctccatgtgtcctcttctttgatgagcttgactctattgccactcagagag 1839 Query: 131 gaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactg 190 |||||||||||||||||||||| ||||| ||||||||||| || || || || |||||| Sbjct: 1840 gaagcagtgttggggatgctggtggtgcggctgatagagttctaaatcaacttttgactg 1899 Query: 191 agatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccag 250 | |||||||||||| ||||| |||||||| ||||| ||||| || || ||||| || | Sbjct: 1900 aaatggatggcatgtctgccaaaaagactgtgttcataattggggcaactaacagacctg 1959 Query: 251 acatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctc 310 ||||||| ||||| || |||||| | ||||| ||||| ||||| | ||||| || |||| Sbjct: 1960 acatcattgacccagcacttcttcgaccaggccgtctggatcaattgatctatattcctc 2019 Query: 311 ttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttgg 370 | ||||||| || || |||| || ||||| ||||| ||| | |||||||| ||| | | Sbjct: 2020 tccctgatgaggattcccggcatcaaatctttaaagcctgcttgaggaagtcacctatcg 2079 Query: 371 ccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcggtgctgat 430 | || || ||||| | || || |||| | | |||| ||||| ||| || ||||||||| Sbjct: 2080 caaaaaatgttgatttgagagcattggctaggcacactcaagggttc-agtggtgctgat 2138 Query: 431 atcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaaggac 490 || || ||||| |||||||| || ||||| || ||||| || || ||||| ||||||||| Sbjct: 2139 attacagaaatatgccagcgagcatgcaaatatgccataagagaaaacatagagaaggac 2198 Query: 491 a 491 | Sbjct: 2199 a 2199
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 214 bits (108), Expect = 2e-52 Identities = 231/272 (84%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| || ||| Sbjct: 1688 ggacctgagctgcttaccatgtggtttggagagagtgaggccaatgtccgtgaaattttt 1747 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1748 gacaaggctagacaatctgcaccctgtgtcctcttctttgatgagcttgactctattgcc 1807 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || ||||| ||||||||| ||| |||||||| || || |||||| | || || ||||| Sbjct: 1808 actcagaggggaagcagtagtggtgatgctggtggagcagctgatcgggttctcaaccaa 1867 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||||||| |||||||||||||| || ||||| ||||| || || ||||| || || Sbjct: 1868 cttctgactgaaatggatggcatgaatgcaaagaaaactgtttttattattggggccaca 1927 Query: 241 aacaggccagacatcatcgaccctgcccttct 272 |||||||| || || || |||||||| ||||| Sbjct: 1928 aacaggcctgatattattgaccctgcacttct 1959
>dbj|AK058908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E02, full insert sequence Length = 872 Score = 212 bits (107), Expect = 8e-52 Identities = 270/323 (83%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 169 gtgctgaaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatc 228 |||||||| |||||| |||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 1 gtgctgaatcagctgttgacagagatggatggcatgaatgccaagaagactgttttcatt 60 Query: 229 attggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtctt 288 ||||| ||||| |||||||| |||||||| || || ||| | ||||||||||||||||| Sbjct: 61 attggggctacaaacaggcctgacatcatagatccggccttgcttaggccagggcgtctc 120 Query: 289 gatcagcttatctacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagct 348 |||||||| |||||||| || || ||||||| | || |||| ||| || ||||||||| Sbjct: 121 gatcagctgatctacattccactgcctgatgagcaatctaggctccaaattttcaaagct 180 Query: 349 tgcctcaggaagtctcctttggccaaggatattgatctcagtgctctggccaagtacacc 408 |||||||||||||| ||| |||| |||||| | || | | ||||| |||||||||||| Sbjct: 181 tgcctcaggaagtcccctgtggcgaaggatgtggacttgaacgctcttgccaagtacacc 240 Query: 409 caaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccat 468 ||||| ||| || ||||| ||||| || ||||| || |||||||| ||||| || || || Sbjct: 241 caaggcttc-agtggtgcagatattacagaaatctgtcagcgtgcatgcaaatatgcgat 299 Query: 469 cagggagaacattgagaaggaca 491 || |||||||| |||||||||| Sbjct: 300 tagagagaacatcgagaaggaca 322
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 186 bits (94), Expect = 5e-44 Identities = 299/366 (81%), Gaps = 1/366 (0%) Strand = Plus / Plus Query: 124 cagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctg 183 |||||||| | ||||||||| |||||||| ||||| || |||||||| |||||||||| Sbjct: 49874 cagagagggaacagtgttggagatgctggtggtgcagcagatagagtattgaaccagctt 49933 Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 || || ||||||||||| ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 49934 cttacggagatggatggaatgaatgctaagaagacggtcttcatcatcggagctacaaac 49993 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 || |||||||| || || ||||| ||||| | || || ||||| |||||||| |||||| Sbjct: 49994 agaccagacattattgatcctgcacttctgcgtcctggtcgtctcgatcagctcatctac 50053 Query: 304 atccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtct 363 || ||||||||||||| || || | |||||||||| || ||||| | ||||| || Sbjct: 50054 attcctcttcctgatgaggagtctcgttaccagatctttaagtcttgcttgaggaaatca 50113 Query: 364 cctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcgg 423 ||| |||| || ||| |||| || || ||||| || |||||||||||||| ||| || || Sbjct: 50114 cctgtggcgaaagatgttgacctgagggctcttgctaagtacacccaaggcttc-agtgg 50172 Query: 424 tgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattga 483 ||| || ||||| || |||||||||||| |||||||||| || ||||| || ||||| || Sbjct: 50173 tgcggacatcacagagatttgccagcgttcttgcaagtatgcgatcagagaaaacatcga 50232 Query: 484 gaagga 489 |||||| Sbjct: 50233 gaagga 50238 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||| || || ||||||||||| |||||||| || |||||| | ||||| || ||| Sbjct: 49660 cctgagctcctcacaatgtggtttggagagagtgaagccaatgtgagagagatattcgac 49719 Query: 64 aaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactc 113 ||||| | ||| || || ||||| || |||||||||||||| ||||| Sbjct: 49720 aaggcacgacagtctgccccttgtgttcttttctttgatgagctggactc 49769
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 163 bits (82), Expect = 7e-37 Identities = 386/486 (79%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 |||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || || Sbjct: 1713 ggacctgaactgctcaccatgtggtttggagagagtgaggcgaatgttcgtgaaattttc 1772 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 || || || || || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1773 gataaagccagacaatctgcaccttgcgtcctcttctttgatgagcttgactctattgct 1832 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || ||||| || ||||| ||| ||||||||||| || |||||| | || |||| || Sbjct: 1833 actcagaggggcagcagcagtggagatgctggaggagcagctgatcgtgttttgaatcaa 1892 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||||||| |||||||||||||| || ||||||||||| || || ||||| || || Sbjct: 1893 cttctgactgaaatggatggcatgaatgcaaagaagactgtttttataattggggccaca 1952 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 |||||||| || || || |||||||| |||||| | || || |||||||| ||| | || Sbjct: 1953 aacaggcctgatataattgaccctgcacttcttcgacctggccgtcttgaccagttaatt 2012 Query: 301 tacatccctcttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaag 360 || || ||||| || |||| || || | || ||||| ||||| || || ||||| || Sbjct: 2013 tatattcctctgccagatgaagattcacgccatcagattttcaaggcatgtctcagaaaa 2072 Query: 361 tctcctttggccaaggatattgatctcagtgctctggccaagtacacccaaggattcaag 420 || || || | |||||||||||||| || ||||| ||||| | || |||||||| | | Sbjct: 2073 tcccccttatcaaaggatattgatctgagagctctcgccaaacatactcaaggattta-g 2131 Query: 421 cggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacat 480 || ||||||||||| || ||||| || || | ||||| || ||||| ||||||||||| Sbjct: 2132 tggggctgatatcactgagatttgtcaacgatcctgcaaatatgccataagggagaacat 2191 Query: 481 tgagaa 486 ||||| Sbjct: 2192 agagaa 2197
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 163 bits (82), Expect = 7e-37 Identities = 241/294 (81%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 |||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| || || Sbjct: 1678 ggacctgaactgctcaccatgtggtttggagagagtgaggcgaatgttcgtgaaattttc 1737 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 || || || || || || || || |||||||||||||||||||| |||||||||||| Sbjct: 1738 gataaagcgagacaatccgctccctgcgtcctcttctttgatgagctcgactctattgct 1797 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||||||||| ||| ||||||||||| || |||||| | || |||||||| Sbjct: 1798 actcagagaggaagcagcagtggagatgctggaggagcagctgatcgggttctgaaccaa 1857 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || ||||||| |||||||||||||| || ||||||||||| || || ||||| || || Sbjct: 1858 cttttgactgaaatggatggcatgaatgcaaagaagactgtttttattattggggccaca 1917 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||| || || || || |||||||| ||||| | || || |||||||||||| Sbjct: 1918 aacagacctgatataattgaccctgcacttctgcgtcctggccgtcttgatcag 1971
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 135 bits (68), Expect = 2e-28 Identities = 131/152 (86%) Strand = Plus / Plus Query: 157 gccgctgatagagtgctgaaccagctgctgactgagatggatggcatgaacgccaagaag 216 ||||||||| | |||||||||||| ||||||| |||||||| ||||||||| |||||||| Sbjct: 1206 gccgctgatcgcgtgctgaaccagatgctgacggagatggacggcatgaactccaagaag 1265 Query: 217 actgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgcccttcttagg 276 || |||||||||||||| || ||||||||||| |||||||||||| | ||||| || || Sbjct: 1266 accgtcttcatcattggagcaaccaacaggccggacatcatcgactccgccctgctgcgg 1325 Query: 277 ccagggcgtcttgatcagcttatctacatccc 308 || || || || || ||||| ||||||||||| Sbjct: 1326 cctggccgactggaccagctgatctacatccc 1357 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| ||||||||||| |||||||||||||| || |||||||||||| | ||| Sbjct: 1053 cctgagctgctcaccatgtggttcggtgagagtgaggccaacgtgcgtgagatcctcgac 1112 Query: 64 aaggct 69 |||||| Sbjct: 1113 aaggct 1118 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 431 atcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaaggac 490 |||||||| || |||||| | || ||||| ||||||||||| || ||||||||||||||| Sbjct: 1479 atcaccgagatctgccagagggcctgcaaatacgccatcagagaaaacattgagaaggac 1538 Query: 491 a 491 | Sbjct: 1539 a 1539
>gb|AY232675.1| Mirabilis jalapa CDC48-like protein mRNA, partial cds Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 288/360 (80%), Gaps = 1/360 (0%) Strand = Plus / Plus Query: 130 ggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgact 189 ||||||||||| || |||||||| || || ||||| || || |||||||| || |||| Sbjct: 1 ggaagcagtgtaggtgatgctggtggcgctgctgacagggttctgaaccaacttttgaca 60 Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 || |||||||||||| || |||||||| || ||||| |||||||| || ||||| || Sbjct: 61 gaaatggatggcatgtctgcaaagaagacagtgttcattattggtgccacaaacagacct 120 Query: 250 gacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccct 309 || || || || || |||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 121 gatattattgatccagcccttctgcgacctggccgtcttgatcaacttatctacatccct 180 Query: 310 cttcctgatgtcgactcgaggcaccagatcttcaaagcttgcctcaggaagtctcctttg 369 | || |||| || || | |||||||| ||||| || | | |||||||||||| | Sbjct: 181 ttaccagatgaggattctcgtcaccagattttcaaggcagccttgaggaagtctcctatt 240 Query: 370 gccaaggatattgatctcagtgctctggccaagtacacccaaggattcaagcggtgctga 429 || || ||| ||||| | || || || || || ||||| || || |||| ||||||| || Sbjct: 241 gctaaagatgttgatattagggcacttgctaaatacactcagggtttca-gcggtgcaga 299 Query: 430 tatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacattgagaagga 489 |||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 300 tatcaccgaaatatgccaacgtgcttgcaaatatgccatcagggagaacattgagaagga 359
>gb|AY107375.1| Zea mays PCO097021 mRNA sequence Length = 711 Score = 131 bits (66), Expect = 2e-27 Identities = 136/158 (86%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 334 cagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatctcagtgct 393 |||||||||||||| |||||||||||||||||| |||| ||||| |||| | |||| Sbjct: 15 cagatcttcaaagcctgcctcaggaagtctcctgtggctaaggacgttgacttgcatgct 74 Query: 394 ctggccaagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgc 453 || |||||||||||||| || |||| | || || ||||||||||| || ||||||||||| Sbjct: 75 cttgccaagtacacccagggtttca-gtggagcagatatcaccgagatctgccagcgtgc 133 Query: 454 ttgcaagtacgccatcagggagaacattgagaaggaca 491 |||||||| ||||||||||||||||| |||||||||| Sbjct: 134 gtgcaagtatgccatcagggagaacatcgagaaggaca 171
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 109 bits (55), Expect = 9e-21 Identities = 198/245 (80%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| | || Sbjct: 1811 atgtggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatcc 1870 Query: 79 gcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc--- 135 || |||||||| || |||||||||||||| ||||| ||||| || ||||||||| | Sbjct: 1871 gctccatgtgttcttttctttgatgagctcgactccattgcaactcagagaggaggtgga 1930 Query: 136 agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg 195 |||| ||| |||| || ||||| || || ||||| |||||||||| ||||||||||| Sbjct: 1931 agtggtggcgatggaggtggtgctgcggacagagtcttgaaccagcttttgactgagatg 1990 Query: 196 gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc 255 || || ||||| |||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct: 1991 gacggaatgaatgccaagaaaaccgtcttcatcatcggagctaccaacagacctgacatt 2050 Query: 256 atcga 260 ||||| Sbjct: 2051 atcga 2055 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 2216 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 2275 Query: 482 gagaaggaca 491 |||||||||| Sbjct: 2276 gagaaggaca 2285
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 109 bits (55), Expect = 9e-21 Identities = 198/245 (80%), Gaps = 3/245 (1%) Strand = Plus / Minus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| | || Sbjct: 44752 atgtggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatcc 44693 Query: 79 gcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc--- 135 || |||||||| || |||||||||||||| ||||| ||||| || ||||||||| | Sbjct: 44692 gctccatgtgttcttttctttgatgagctcgactccattgcaactcagagaggaggtgga 44633 Query: 136 agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg 195 |||| ||| |||| || ||||| || || ||||| |||||||||| ||||||||||| Sbjct: 44632 agtggtggcgatggaggtggtgctgcggacagagtcttgaaccagcttttgactgagatg 44573 Query: 196 gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc 255 || || ||||| |||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct: 44572 gacggaatgaatgccaagaaaaccgtcttcatcatcggagctaccaacagacctgacatt 44513 Query: 256 atcga 260 ||||| Sbjct: 44512 atcga 44508 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 44347 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 44288 Query: 482 gagaagg 488 ||||||| Sbjct: 44287 gagaagg 44281
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 109 bits (55), Expect = 9e-21 Identities = 198/245 (80%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| | || Sbjct: 1767 atgtggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatcc 1826 Query: 79 gcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc--- 135 || |||||||| || |||||||||||||| ||||| ||||| || ||||||||| | Sbjct: 1827 gctccatgtgttcttttctttgatgagctcgactccattgcaactcagagaggaggtgga 1886 Query: 136 agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg 195 |||| ||| |||| || ||||| || || ||||| |||||||||| ||||||||||| Sbjct: 1887 agtggtggcgatggaggtggtgctgcggacagagtcttgaaccagcttttgactgagatg 1946 Query: 196 gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc 255 || || ||||| |||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct: 1947 gacggaatgaatgccaagaaaaccgtcttcatcatcggagctaccaacagacctgacatt 2006 Query: 256 atcga 260 ||||| Sbjct: 2007 atcga 2011 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 2172 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 2231 Query: 482 gagaaggaca 491 |||||||||| Sbjct: 2232 gagaaggaca 2241
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 109 bits (55), Expect = 9e-21 Identities = 198/245 (80%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| | || Sbjct: 1801 atgtggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatcc 1860 Query: 79 gcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc--- 135 || |||||||| || |||||||||||||| ||||| ||||| || ||||||||| | Sbjct: 1861 gctccatgtgttcttttctttgatgagctcgactccattgcaactcagagaggaggtgga 1920 Query: 136 agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg 195 |||| ||| |||| || ||||| || || ||||| |||||||||| ||||||||||| Sbjct: 1921 agtggtggcgatggaggtggtgctgcggacagagtcttgaaccagcttttgactgagatg 1980 Query: 196 gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc 255 || || ||||| |||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct: 1981 gacggaatgaatgccaagaaaaccgtcttcatcatcggagctaccaacagacctgacatt 2040 Query: 256 atcga 260 ||||| Sbjct: 2041 atcga 2045 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 2206 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 2265 Query: 482 gagaaggaca 491 |||||||||| Sbjct: 2266 gagaaggaca 2275
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 109 bits (55), Expect = 9e-21 Identities = 198/245 (80%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| | || Sbjct: 1750 atgtggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatcc 1809 Query: 79 gcaccatgtgtcctcttctttgatgagcttgactctattgctacccagagaggaagc--- 135 || |||||||| || |||||||||||||| ||||| ||||| || ||||||||| | Sbjct: 1810 gctccatgtgttcttttctttgatgagctcgactccattgcaactcagagaggaggtgga 1869 Query: 136 agtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctgactgagatg 195 |||| ||| |||| || ||||| || || ||||| |||||||||| ||||||||||| Sbjct: 1870 agtggtggcgatggaggtggtgctgcggacagagtcttgaaccagcttttgactgagatg 1929 Query: 196 gatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagacatc 255 || || ||||| |||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct: 1930 gacggaatgaatgccaagaaaaccgtcttcatcatcggagctaccaacagacctgacatt 1989 Query: 256 atcga 260 ||||| Sbjct: 1990 atcga 1994 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 2155 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 2214 Query: 482 gagaaggaca 491 |||||||||| Sbjct: 2215 gagaaggaca 2224
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||||||||||||||| ||| | ||||||||| ||||||||||| ||| Sbjct: 1633 aaccaggttctgactgagatggatggtatgggctccaagaagaacgtcttcatcatcggt 1692 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 || |||||||||||||||||| | ||| ||||| | || | ||||| ||||| |||||| Sbjct: 1693 gcaaccaacaggccagacatcgtagactctgccatcctacgtccaggacgtctagatcag 1752 Query: 295 cttatctacatccc 308 |||||||||||||| Sbjct: 1753 cttatctacatccc 1766
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||||||||||||||| ||| | ||||||||| ||||||||||| ||| Sbjct: 1633 aaccaggttctgactgagatggatggtatgggctccaagaagaacgtcttcatcatcggt 1692 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 || |||||||||||||||||| | ||| ||||| | || | ||||| ||||| |||||| Sbjct: 1693 gcaaccaacaggccagacatcgtagactctgccatcctacgtccaggacgtctagatcag 1752 Query: 295 cttatctacatccc 308 |||||||||||||| Sbjct: 1753 cttatctacatccc 1766
>ref|XM_428317.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC430766), partial mRNA Length = 1516 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| ||||||||||||||| | ||||||||| |||||||||||| ||| Sbjct: 903 aaccagatcctgacagagatggatggcatgtccaccaagaagaatgtcttcatcatcggt 962 Query: 235 gctaccaacaggccagacatcatcgaccc 263 || |||||||||||||||||||| ||||| Sbjct: 963 gccaccaacaggccagacatcattgaccc 991 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 ||||||||||||||||||| || ||| || |||||||| ||||||||||||||||| Sbjct: 739 tgcttaccatgtggtttggagaatctgaagccaatgtgcgcgagatctttgacaaggccc 798 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgc 119 | |||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 799 gccaagcagccccttgtgtactcttctttgatgagctggactccattgc 847
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL22-93-G21 Length = 697 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 422 ggtgctgatatcaccgaaatttgccagcgtgcttgcaagtacgccatcagggagaacatt 481 |||||||||||||| || ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 106 ggtgctgatatcactgagatttgccagagagcttgcaagtacgccatcagagaaaacatt 165 Query: 482 gagaaggaca 491 |||||||||| Sbjct: 166 gagaaggaca 175
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 1319 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 1378 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 1379 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 1438 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 1439 ctcatctacatcccacttcctgatg 1463 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1148 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1207 Query: 64 aaggc 68 ||||| Sbjct: 1208 aaggc 1212 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 1583 atttgccagcgtgcttgcaag 1603
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 3937 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 3996 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 3997 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 4056 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 4057 ctcatctacatcccacttcctgatg 4081 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 3766 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 3825 Query: 64 aaggc 68 ||||| Sbjct: 3826 aaggc 3830 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 4201 atttgccagcgtgcttgcaag 4221
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2100 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2159 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2160 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2219 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2220 ctcatctacatcccacttcctgatg 2244 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1929 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1988 Query: 64 aaggc 68 ||||| Sbjct: 1989 aaggc 1993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2364 atttgccagcgtgcttgcaag 2384
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2016 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2075 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2076 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2135 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2136 ctcatctacatcccacttcctgatg 2160 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1845 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1904 Query: 64 aaggc 68 ||||| Sbjct: 1905 aaggc 1909 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2280 atttgccagcgtgcttgcaag 2300
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2052 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2111 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2112 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2171 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2172 ctcatctacatcccacttcctgatg 2196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1881 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1940 Query: 64 aaggc 68 ||||| Sbjct: 1941 aaggc 1945 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2316 atttgccagcgtgcttgcaag 2336
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 29410 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 29351 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 29350 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 29291 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 29290 ctcatctacatcccacttcctgatg 29266 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 30092 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 30033 Query: 64 aagg 67 |||| Sbjct: 30032 aagg 30029 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 28873 atttgccagcgtgcttgcaag 28853
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 679 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 738 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 739 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 798 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 799 ctcatctacatcccacttcctgatg 823 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 508 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 567 Query: 64 aaggc 68 ||||| Sbjct: 568 aaggc 572 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 943 atttgccagcgtgcttgcaag 963
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2043 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2102 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2103 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2162 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2163 ctcatctacatcccacttcctgatg 2187 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1872 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1931 Query: 64 aaggc 68 ||||| Sbjct: 1932 aaggc 1936 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2311 atttgccagcgtgcttgcaag 2331
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 39600 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 39541 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 39540 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 39481 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 39480 ctcatctacatcccacttcctgatg 39456 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 40280 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 40221 Query: 64 aagg 67 |||| Sbjct: 40220 aagg 40217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 39063 atttgccagcgtgcttgcaag 39043
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2016 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2075 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2076 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2135 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2136 ctcatctacatcccacttcctgatg 2160 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1845 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1904 Query: 64 aaggc 68 ||||| Sbjct: 1905 aaggc 1909 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2280 atttgccagcgtgcttgcaag 2300
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 2003 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 2062 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||||||||||| Sbjct: 2063 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgatcag 2122 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 2123 ctcatctacatcccacttcctgatg 2147 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 1832 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 1891 Query: 64 aaggc 68 ||||| Sbjct: 1892 aaggc 1896 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 2267 atttgccagcgtgcttgcaag 2287
>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence Length = 646 Score = 87.7 bits (44), Expect = 3e-14 Identities = 129/156 (82%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 334 cagatcttcaaagcttgcctcaggaagtctcctttggccaaggatattgatctcagtgct 393 |||||||||||||| | ||| |||||||||| ||||||||||| |||| | | |||| Sbjct: 33 cagatcttcaaagcctctttcaagaagtctcctgtggccaaggatgttgacttgaatgct 92 Query: 394 ctggccaagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgc 453 || ||||| |||||||| || |||| ||| | |||||||| || || |||||||| || Sbjct: 93 ctcgccaaatacacccagggtttca-gcgtcccagatatcacagagatctgccagcgcgc 151 Query: 454 ttgcaagtacgccatcagggagaacattgagaagga 489 |||||||| ||||||||||||||||| |||||||| Sbjct: 152 gtgcaagtatgccatcagggagaacatcgagaagga 187
>ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2547 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 169 gtgctgaaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatc 228 ||||| ||||||||||| || |||||||| ||||| |||||||||||||| || ||| || Sbjct: 1834 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 1893 Query: 229 attggtgctaccaacaggccagacatcatcgaccc 263 || || || |||||| |||| |||||||||||||| Sbjct: 1894 atcggcgccaccaaccggccggacatcatcgaccc 1928
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 169 gtgctgaaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatc 228 ||||| ||||||||||| || |||||||| ||||| |||||||||||||| || ||| || Sbjct: 19750548 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 19750489 Query: 229 attggtgctaccaacaggccagacatcatcgaccc 263 || || || |||||| |||| |||||||||||||| Sbjct: 19750488 atcggcgccaccaaccggccggacatcatcgaccc 19750454
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 169 gtgctgaaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatc 228 ||||| ||||||||||| || |||||||| ||||| |||||||||||||| || ||| || Sbjct: 79499 gtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtc 79440 Query: 229 attggtgctaccaacaggccagacatcatcgaccc 263 || || || |||||| |||| |||||||||||||| Sbjct: 79439 atcggcgccaccaaccggccggacatcatcgaccc 79405
>ref|XM_631818.1| Dictyostelium discoideum cell division cycle protein 48 (DDB0191154), partial mRNA Length = 2382 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 187 actgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacagg 246 ||||| |||||||| |||||||||||||||| || |||||||||||||||||||| || Sbjct: 1810 actgaaatggatggtatgaacgccaagaagaacgttttcatcattggtgctaccaataga 1869 Query: 247 ccagacatcatcga 260 ||||| |||||||| Sbjct: 1870 ccagatatcatcga 1883
>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence Length = 79224 Score = 83.8 bits (42), Expect = 5e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 |||||||| || |||||||| ||||||| |||||||||||| || || ||||| || ||| Sbjct: 63960 gagatggacggaatgaacgcgaagaagaatgtcttcatcatcggagccaccaatagacca 63901 Query: 250 gacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccct 309 |||||||| || || || ||||| | ||||| ||||| |||||||| |||||||| || Sbjct: 63900 gacatcattgatccagctgttcttcgtccaggacgtctcgatcagctcatctacattcca 63841 Query: 310 cttcctgatg 319 ||||| |||| Sbjct: 63840 cttccagatg 63831
>gb|U83085.2|DDU83085 Dictyostelium discoideum cell division cycle protein 48 (cdcD) mRNA, complete cds Length = 2517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 187 actgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacagg 246 ||||| |||||||| |||||||||||||||| || |||||||||||||||||||| || Sbjct: 1835 actgaaatggatggtatgaacgccaagaagaacgttttcatcattggtgctaccaataga 1894 Query: 247 ccagacatcatcga 260 ||||| |||||||| Sbjct: 1895 ccagatatcatcga 1908
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| ||||||||||| ||| | ||||||||| || |||||||| ||| Sbjct: 1842 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 1901 Query: 235 gctaccaacaggccagacatcatcgaccc 263 ||||||||||||||||||||||| ||||| Sbjct: 1902 gctaccaacaggccagacatcattgaccc 1930 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| ||| || || |||||||| ||||||||||||||||| Sbjct: 1678 tgctcaccatgtggtttggagagtcagaagccaatgtgcgcgagatctttgacaaggccc 1737 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgc 119 | |||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1738 gccaagcagccccttgtgtgctcttctttgatgagctggactccattgc 1786
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| ||||||||||| ||| | ||||||||| || |||||||| ||| Sbjct: 1956 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 2015 Query: 235 gctaccaacaggccagacatcatcgaccc 263 ||||||||||||||||||||||| ||||| Sbjct: 2016 gctaccaacaggccagacatcattgaccc 2044 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| ||| || || |||||||| ||||||||||||||||| Sbjct: 1792 tgctcaccatgtggtttggagagtcagaagccaatgtgcgcgagatctttgacaaggccc 1851 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgc 119 | |||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1852 gccaagcagccccttgtgtgctcttctttgatgagctggactccattgc 1900
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| ||||||||||| ||| | ||||||||| || |||||||| ||| Sbjct: 1906 aaccagatcctgacagagatggatggtatgtccaccaagaagaacgttttcatcatcggt 1965 Query: 235 gctaccaacaggccagacatcatcgaccc 263 ||||||||||||||||||||||| ||||| Sbjct: 1966 gctaccaacaggccagacatcattgaccc 1994 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 70 |||| |||||||||||||| ||| || || |||||||| ||||||||||||||||| Sbjct: 1742 tgctcaccatgtggtttggagagtcagaagccaatgtgcgcgagatctttgacaaggccc 1801 Query: 71 gggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgc 119 | |||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1802 gccaagcagccccttgtgtgctcttctttgatgagctggactccattgc 1850
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | || || | ||| ||||||||||| Sbjct: 690 aaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgttcatcattggc 749 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||||||| |||| |||||||| || |||||| | || || || || |||| ||||||| Sbjct: 750 gctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcctgatcag 809 Query: 295 cttatctacatccctcttcctgatg 319 || ||||||||||| |||||||||| Sbjct: 810 ctcatctacatcccacttcctgatg 834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||||| Sbjct: 519 cctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttgac 578 Query: 64 aaggc 68 ||||| Sbjct: 579 aaggc 583 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 atttgccagcgtgcttgcaag 460 ||||||||||||||||||||| Sbjct: 953 atttgccagcgtgcttgcaag 973
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 77.8 bits (39), Expect = 3e-11 Identities = 249/319 (78%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||| ||||| || || ||||||||||| || ||||| || || || || || |||||| Sbjct: 1734 ggacccgagcttctcacaatgtggtttggagaaagtgaagccaacgtccgagaaatcttt 1793 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||| | || || || ||||| || || || |||||||| ||||| |||||| Sbjct: 1794 gacaaggctcgtcaatctgctccttgtgttctgtttttcgatgagctagactccattgct 1853 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||| | ||| | || ||||| || ||||| ||||| |||||| |||| ||| Sbjct: 1854 actcagagagggaacagcgcgggtgatgccggcggtgcagctgacagagtgttgaatcag 1913 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||| || |||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 1914 cttttgacagaaatggatggaatgaatgcaaagaagacggtattcattattggagcaact 1973 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||| || || ||||| || | || |||||| | || || | || || ||||||||| Sbjct: 1974 aacagaccggatatcatagattcagctcttcttcgacctggaagactcgaccagcttatc 2033 Query: 301 tacatccctcttcctgatg 319 ||||| ||||| ||||||| Sbjct: 2034 tacattcctctacctgatg 2052 Score = 75.8 bits (38), Expect = 1e-10 Identities = 78/90 (86%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 400 aagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaa 459 |||||||| || ||||||| | ||||||||||||||||| || |||||| | |||||||| Sbjct: 2133 aagtacactcagggattca-gtggtgctgatatcaccgagatctgccagagagcttgcaa 2191 Query: 460 gtacgccatcagggagaacattgagaagga 489 |||||||||||| || ||||| || ||||| Sbjct: 2192 gtacgccatcagagaaaacatcgaaaagga 2221
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 77.8 bits (39), Expect = 3e-11 Identities = 249/319 (78%) Strand = Plus / Minus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||| ||||| || || ||||||||||| || ||||| || || || || || |||||| Sbjct: 24802 ggacccgagcttctcacaatgtggtttggagaaagtgaagccaacgtccgagaaatcttt 24743 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||| | || || || ||||| || || || |||||||| ||||| |||||| Sbjct: 24742 gacaaggctcgtcaatctgctccttgtgttctgtttttcgatgagctagactccattgct 24683 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||| | ||| | || ||||| || ||||| ||||| |||||| |||| ||| Sbjct: 24682 actcagagagggaacagcgcgggtgatgccggcggtgcagctgacagagtgttgaatcag 24623 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||| || |||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 24622 cttttgacagaaatggatggaatgaatgcaaagaagacggtattcattattggagcaact 24563 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||| || || ||||| || | || |||||| | || || | || || ||||||||| Sbjct: 24562 aacagaccggatatcatagattcagctcttcttcgacctggaagactcgaccagcttatc 24503 Query: 301 tacatccctcttcctgatg 319 ||||| ||||| ||||||| Sbjct: 24502 tacattcctctacctgatg 24484 Score = 73.8 bits (37), Expect = 5e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 400 aagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaa 459 |||||||| || ||||||| | ||||||||||||||||| || |||||| | |||||||| Sbjct: 24403 aagtacactcagggattca-gtggtgctgatatcaccgagatctgccagagagcttgcaa 24345 Query: 460 gtacgccatcagggagaacat 480 |||||||||||| || ||||| Sbjct: 24344 gtacgccatcagagaaaacat 24324
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 77.8 bits (39), Expect = 3e-11 Identities = 249/319 (78%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||| ||||| || || ||||||||||| || ||||| || || || || || |||||| Sbjct: 1639 ggacccgagcttctcacaatgtggtttggagaaagtgaagccaacgtccgagaaatcttt 1698 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||| | || || || ||||| || || || |||||||| ||||| |||||| Sbjct: 1699 gacaaggctcgtcaatctgctccttgtgttctgtttttcgatgagctagactccattgct 1758 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||| | ||| | || ||||| || ||||| ||||| |||||| |||| ||| Sbjct: 1759 actcagagagggaacagcgcgggtgatgccggcggtgcagctgacagagtgttgaatcag 1818 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||| || |||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 1819 cttttgacagaaatggatggaatgaatgcaaagaagacggtattcattattggagcaact 1878 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||| || || ||||| || | || |||||| | || || | || || ||||||||| Sbjct: 1879 aacagaccggatatcatagattcagctcttcttcgacctggaagactcgaccagcttatc 1938 Query: 301 tacatccctcttcctgatg 319 ||||| ||||| ||||||| Sbjct: 1939 tacattcctctacctgatg 1957 Score = 75.8 bits (38), Expect = 1e-10 Identities = 78/90 (86%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 400 aagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaa 459 |||||||| || ||||||| | ||||||||||||||||| || |||||| | |||||||| Sbjct: 2038 aagtacactcagggattca-gtggtgctgatatcaccgagatctgccagagagcttgcaa 2096 Query: 460 gtacgccatcagggagaacattgagaagga 489 |||||||||||| || ||||| || ||||| Sbjct: 2097 gtacgccatcagagaaaacatcgaaaagga 2126
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 77.8 bits (39), Expect = 3e-11 Identities = 249/319 (78%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||| ||||| || || ||||||||||| || ||||| || || || || || |||||| Sbjct: 1734 ggacccgagcttctcacaatgtggtttggagaaagtgaagccaacgtccgagaaatcttt 1793 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||| | || || || ||||| || || || |||||||| ||||| |||||| Sbjct: 1794 gacaaggctcgtcaatctgctccttgtgttctgtttttcgatgagctagactccattgct 1853 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||| | ||| | || ||||| || ||||| ||||| |||||| |||| ||| Sbjct: 1854 actcagagagggaacagcgcgggtgatgccggcggtgcagctgacagagtgttgaatcag 1913 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||| || |||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 1914 cttttgacagaaatggatggaatgaatgcaaagaagacggtattcattattggagcaact 1973 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||| || || ||||| || | || |||||| | || || | || || ||||||||| Sbjct: 1974 aacagaccggatatcatagattcagctcttcttcgacctggaagactcgaccagcttatc 2033 Query: 301 tacatccctcttcctgatg 319 ||||| ||||| ||||||| Sbjct: 2034 tacattcctctacctgatg 2052 Score = 75.8 bits (38), Expect = 1e-10 Identities = 78/90 (86%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 400 aagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaa 459 |||||||| || ||||||| | ||||||||||||||||| || |||||| | |||||||| Sbjct: 2133 aagtacactcagggattca-gtggtgctgatatcaccgagatctgccagagagcttgcaa 2191 Query: 460 gtacgccatcagggagaacattgagaagga 489 |||||||||||| || ||||| || ||||| Sbjct: 2192 gtacgccatcagagaaaacatcgaaaagga 2221
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 77.8 bits (39), Expect = 3e-11 Identities = 249/319 (78%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatcttt 60 ||||| ||||| || || ||||||||||| || ||||| || || || || || |||||| Sbjct: 1727 ggacccgagcttctcacaatgtggtttggagaaagtgaagccaacgtccgagaaatcttt 1786 Query: 61 gacaaggctagggggtcagcaccatgtgtcctcttctttgatgagcttgactctattgct 120 ||||||||| | || || || ||||| || || || |||||||| ||||| |||||| Sbjct: 1787 gacaaggctcgtcaatctgctccttgtgttctgtttttcgatgagctagactccattgct 1846 Query: 121 acccagagaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccag 180 || |||||||| | ||| | || ||||| || ||||| ||||| |||||| |||| ||| Sbjct: 1847 actcagagagggaacagcgcgggtgatgccggcggtgcagctgacagagtgttgaatcag 1906 Query: 181 ctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctacc 240 || |||| || |||||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 1907 cttttgacagaaatggatggaatgaatgcaaagaagacggtattcattattggagcaact 1966 Query: 241 aacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatc 300 ||||| || || ||||| || | || |||||| | || || | || || ||||||||| Sbjct: 1967 aacagaccggatatcatagattcagctcttcttcgacctggaagactcgaccagcttatc 2026 Query: 301 tacatccctcttcctgatg 319 ||||| ||||| ||||||| Sbjct: 2027 tacattcctctacctgatg 2045 Score = 75.8 bits (38), Expect = 1e-10 Identities = 78/90 (86%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 400 aagtacacccaaggattcaagcggtgctgatatcaccgaaatttgccagcgtgcttgcaa 459 |||||||| || ||||||| | ||||||||||||||||| || |||||| | |||||||| Sbjct: 2126 aagtacactcagggattca-gtggtgctgatatcaccgagatctgccagagagcttgcaa 2184 Query: 460 gtacgccatcagggagaacattgagaagga 489 |||||||||||| || ||||| || ||||| Sbjct: 2185 gtacgccatcagagaaaacatcgaaaagga 2214
>ref|XM_567564.1| Cryptococcus neoformans var. neoformans JEC21 MMS2 (CNJ02750) partial mRNA Length = 2673 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 187 actgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacagg 246 ||||| ||||| || |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 1936 actgaaatggacggtatgaacgcgaagaagaacgtcttcatcattggtgctaccaacagg 1995 Query: 247 cc 248 || Sbjct: 1996 cc 1997
>ref|XM_505319.1| Yarrowia lipolytica CLIB122, YALI0F12155g predicted mRNA Length = 2445 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||||||||| |||||||| || |||||||||||||||| || ||| ||||||| Sbjct: 1843 aaccagctgctgaccgagatggacggtatgaacgccaagaagaacgtgttcgtcattgga 1902 Query: 235 gctaccaacaggcc 248 ||||||||| |||| Sbjct: 1903 gctaccaaccggcc 1916
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||||||||| |||||||| || |||||||||||||||| || ||| ||||||| Sbjct: 1601457 aaccagctgctgaccgagatggacggtatgaacgccaagaagaacgtgttcgtcattgga 1601398 Query: 235 gctaccaacaggcc 248 ||||||||| |||| Sbjct: 1601397 gctaccaaccggcc 1601384
>gb|BC114306.1| Danio rerio zgc:136908, mRNA (cDNA clone MGC:136908 IMAGE:7993906), complete cds Length = 2707 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagac 252 |||||||| |||| | |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1886 atggatgggatgaccaacaagaagaacgtctttatcattggtgccactaacaggcctgat 1945 Query: 253 atcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctctt 312 ||||| || |||||| |||| ||||| || ||| | ||||||||||| || |||||||| Sbjct: 1946 atcattgatcctgccattctaaggcctggtcgtttggatcagcttatttatatccctctg 2005 Query: 313 cctga 317 ||||| Sbjct: 2006 cctga 2010
>ref|NM_001039928.1| Danio rerio zgc:136908 (zgc:136908), mRNA Length = 2707 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagac 252 |||||||| |||| | |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1886 atggatgggatgaccaacaagaagaacgtctttatcattggtgccactaacaggcctgat 1945 Query: 253 atcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccctctt 312 ||||| || |||||| |||| ||||| || ||| | ||||||||||| || |||||||| Sbjct: 1946 atcattgatcctgccattctaaggcctggtcgtttggatcagcttatttatatccctctg 2005 Query: 313 cctga 317 ||||| Sbjct: 2006 cctga 2010
>emb|Z49886.1|CEC06A1 Caenorhabditis elegans Cosmid C06A1, complete sequence Length = 20752 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagac 252 |||||||| |||||||| ||||| | ||| |||||||| || ||||| ||||| || || Sbjct: 2018 atggatggaatgaacgcgaagaaaaatgtgttcatcatcggagctacaaacagacctgat 1959 Query: 253 atcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccc 308 ||||| || || || ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 1958 atcattgatccagctgttcttcgtccaggtcgccttgatcagcttatctacatccc 1903
>ref|NM_063872.3| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.1) (cdc-48.1) mRNA, complete cds Length = 2762 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccagac 252 |||||||| |||||||| ||||| | ||| |||||||| || ||||| ||||| || || Sbjct: 1860 atggatggaatgaacgcgaagaaaaatgtgttcatcatcggagctacaaacagacctgat 1919 Query: 253 atcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccc 308 ||||| || || || ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 1920 atcattgatccagctgttcttcgtccaggtcgccttgatcagcttatctacatccc 1975
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 1933 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 1992 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 1993 cctcaggcccggacgtttggaccaactcatctacatccc 2031 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 1760 gaggcgaatgtccgtgaaatctttgacaaggct 1792
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 |||||||| |||||| ||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1926 gagatggacggcatgggcgccaagaagaacgtcttcatcatcggtgccacaaacagaccg 1985 Query: 250 gacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccc 308 |||||||||||||| ||| | || | || || ||||| || ||||| ||||||||||| Sbjct: 1986 gacatcatcgacccggccatcctgcgtcccggccgtctggaccagctcatctacatccc 2044
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 1909 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 1968 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 1969 cctcaggcccggacgtttggaccaactcatctacatccc 2007 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 1736 gaggcgaatgtccgtgaaatctttgacaaggct 1768
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 1970 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 2029 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 2030 cctcaggcccggacgtttggaccaactcatctacatccc 2068 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 1797 gaggcgaatgtccgtgaaatctttgacaaggct 1829
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 149336 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 149277 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 149276 cctcaggcccggacgtttggaccaactcatctacatccc 149238
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 133346 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 133405 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 133406 cctcaggcctggacgtttggaccaactcatctacatccc 133444
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 |||||||| |||||| ||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1901 gagatggacggcatgggcgccaagaagaacgtcttcatcatcggtgccacaaacagaccg 1960 Query: 250 gacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatccc 308 |||||||||||||| ||| | || | || || ||||| || ||||| ||||||||||| Sbjct: 1961 gacatcatcgacccggccatcctgcgtcccggccgtctggaccagctcatctacatccc 2019
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||||||||||||||||||||| |||| | | ||||||| || ||||||||||| Sbjct: 1913 aaccagctgctgactgagatggatggaatgagctcaaagaagaacgtgttcatcattgga 1972 Query: 235 gctaccaacaggccagacatcat 257 || || ||||| || |||||||| Sbjct: 1973 gccacgaacagacctgacatcat 1995
>ref|XM_692759.1| PREDICTED: Danio rerio similar to Valosin containing protein (LOC569377), mRNA Length = 1747 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 672 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 731 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 732 cctcaggcccggacgtttggaccaactcatctacatccc 770 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 499 gaggcgaatgtccgtgaaatctttgacaaggct 531
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccct 269 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| | Sbjct: 1933 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgccat 1992 Query: 270 tcttaggccagggcgtcttgatcagcttatctacatccc 308 || ||||| || ||| | || || || ||||||||||| Sbjct: 1993 cctcaggcccggacgtttggaccaactcatctacatccc 2031 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 1760 gaggcgaatgtccgtgaaatctttgacaaggct 1792
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 210 caagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgcc 267 |||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||| Sbjct: 1839 caagaagaacgtcttcatcattggggccaccaacagaccagacatcattgaccctgcc 1896 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 gaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||| ||||| ||||||||||||||| Sbjct: 1666 gaggcgaatgtccgtgaaatctttgacaaggct 1698
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||| || |||||||||||| | | || |||| ||| || |||||||| ||||||||| Sbjct: 2024 ctgacagaaatggatggcatgtccacaaaaaagaatgtgtttatcattggagctaccaac 2083 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||| |||||||| || ||||| | || || || || |||||||||||||| || || Sbjct: 2084 cggcctgacatcattgatcctgctatcctaagacctggccgtcttgatcagctcatttat 2143 Query: 304 atccctcttcctgatg 319 ||||| |||||||||| Sbjct: 2144 atcccacttcctgatg 2159 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 1844 cctgagctgcttaccatgtggtttgg 1869
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||| || |||||||||||| | | || |||| ||| || |||||||| ||||||||| Sbjct: 2056 ctgacagaaatggatggcatgtccacaaaaaagaatgtgtttatcattggagctaccaac 2115 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||| |||||||| || ||||| | || || || || |||||||||||||| || || Sbjct: 2116 cggcctgacatcattgatcctgctatcctaagacctggccgtcttgatcagctcatttat 2175 Query: 304 atccctcttcctgatg 319 ||||| |||||||||| Sbjct: 2176 atcccacttcctgatg 2191 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 1876 cctgagctgcttaccatgtggtttgg 1901
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 184 ctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaac 243 ||||| || |||||||||||| | | || |||| ||| || |||||||| ||||||||| Sbjct: 2024 ctgacagaaatggatggcatgtccacaaaaaagaatgtgtttatcattggagctaccaac 2083 Query: 244 aggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctac 303 |||| |||||||| || ||||| | || || || || |||||||||||||| || || Sbjct: 2084 cggcctgacatcattgatcctgctatcctaagacctggccgtcttgatcagctcatttat 2143 Query: 304 atccctcttcctgatg 319 ||||| |||||||||| Sbjct: 2144 atcccacttcctgatg 2159 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 1844 cctgagctgcttaccatgtggtttgg 1869
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/191 (79%) Strand = Plus / Plus Query: 127 agaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctg 186 |||||| | ||||| || |||||||||||||| || ||| | || | |||||| | || Sbjct: 1304 agaggaggaagtgtaggagatgctggaggtgctgccgatcgtgttatcaaccaggttctc 1363 Query: 187 actgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacagg 246 ||||| |||||||| ||||| |||||||| | || ||||| ||||| |||||||| | Sbjct: 1364 actgaaatggatggtatgaatgccaagaaaaacgtgttcattattggagctaccaatcgt 1423 Query: 247 ccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatc 306 || || ||||| || || || ||||| | ||||| ||||| |||||| | |||||||| Sbjct: 1424 cctgatatcattgatccagctgttcttcgtccaggacgtctcgatcagttgatctacatt 1483 Query: 307 cctcttcctga 317 ||||||||||| Sbjct: 1484 cctcttcctga 1494
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/191 (79%) Strand = Plus / Plus Query: 127 agaggaagcagtgttggggatgctggaggtgccgctgatagagtgctgaaccagctgctg 186 |||||| | ||||| || |||||||||||||| || ||| | || | |||||| | || Sbjct: 1860 agaggaggaagtgtaggagatgctggaggtgctgccgatcgtgttatcaaccaggttctc 1919 Query: 187 actgagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacagg 246 ||||| |||||||| ||||| |||||||| | || ||||| ||||| |||||||| | Sbjct: 1920 actgaaatggatggtatgaatgccaagaaaaacgtgttcattattggagctaccaatcgt 1979 Query: 247 ccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcagcttatctacatc 306 || || ||||| || || || ||||| | ||||| ||||| |||||| | |||||||| Sbjct: 1980 cctgatatcattgatccagctgttcttcgtccaggacgtctcgatcagttgatctacatt 2039 Query: 307 cctcttcctga 317 ||||||||||| Sbjct: 2040 cctcttcctga 2050
>dbj|AK119311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G08, full insert sequence Length = 3224 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| |||||||| |||||| ||| ||||||| || |||||||| || Sbjct: 2117 aaccagatcctgacggagatggacggcatgggcgctaagaagaacgtgttcatcatcggc 2176 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 || || ||| |||| |||||||||||||| ||| | ||| |||| || ||||| || ||| Sbjct: 2177 gccacgaaccggcccgacatcatcgaccccgccatccttcggcccggccgtctggaccag 2236 Query: 295 cttatctacat 305 || |||||||| Sbjct: 2237 ctgatctacat 2247
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 ||||||||||| ||| | | ||||||| |||||||||||||| || |||||||||||| Sbjct: 1932 gagatggatggaatgtccacaaagaagaacgtcttcatcattggagccaccaacaggcca 1991 Query: 250 gacatcatcgaccc 263 || || |||||||| Sbjct: 1992 gatattatcgaccc 2005 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 10 ctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||||||||| || ||| |||||| || || | ||||| |||||||||||| Sbjct: 1752 ctgctcaccatgtggttcggagagtctgaggccaacgtcagagagatatttgacaaggct 1811 Query: 70 agggggtcagcaccatgtgtcctcttctttgatga 104 || | | || || |||||||||||||||||||| Sbjct: 1812 cggcaggccgctccttgtgtcctcttctttgatga 1846
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2132 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2191 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2192 ctagatcagctcatttatatcccacttcctgatg 2225 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1910 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1969 Query: 64 aaggc 68 ||||| Sbjct: 1970 aaggc 1974
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1891 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1950 Query: 64 aaggc 68 ||||| Sbjct: 1951 aaggc 1955
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| |||||||| |||||| | |||||||| ||||||||||| || Sbjct: 1647 aaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttcatcatcggc 1706 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 || ||||||||||| || ||||||||||| ||| | || ||||| || | || || ||| Sbjct: 1707 gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggcagactggaccag 1766 Query: 295 cttatctacatccc 308 || ||||||||||| Sbjct: 1767 ctcatctacatccc 1780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 69 |||| ||||||||||| || ||| |||||| ||||| || |||||||||||||||||| Sbjct: 1483 tgctcaccatgtggttcggcgagtctgaggccaatgtccgagagatctttgacaaggct 1541
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1906 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1965 Query: 64 aaggc 68 ||||| Sbjct: 1966 aaggc 1970
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2016 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2075 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2076 ctagatcagctcatttatatcccacttcctgatg 2109 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1794 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1853 Query: 64 aaggc 68 ||||| Sbjct: 1854 aaggc 1858
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 190 gagatggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggcca 249 ||||||||||| ||| | | ||||||| |||||||||||||| || |||||||||||| Sbjct: 1932 gagatggatggaatgtccacaaagaagaacgtcttcatcattggagccaccaacaggcca 1991 Query: 250 gacatcatcgaccc 263 || || |||||||| Sbjct: 1992 gatattatcgaccc 2005 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 10 ctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 69 ||||| ||||||||||| || ||| |||||| || || | ||||| |||||||||||| Sbjct: 1752 ctgctcaccatgtggttcggagagtctgaggccaacgtcagagagatatttgacaaggct 1811 Query: 70 agggggtcagcaccatgtgtcctcttctttgatga 104 || | | || || |||||||||||||||||||| Sbjct: 1812 cggcaggccgctccttgtgtcctcttctttgatga 1846
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2077 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2136 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2137 ctagatcagctcatttatatcccacttcctgatg 2170 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1855 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1914 Query: 64 aaggc 68 ||||| Sbjct: 1915 aaggc 1919
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2079 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2138 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2139 ctagatcagctcatttatatcccacttcctgatg 2172 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1857 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1916 Query: 64 aaggc 68 ||||| Sbjct: 1917 aaggc 1921
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2115 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2174 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2175 ctagatcagctcatttatatcccacttcctgatg 2208 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1893 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1952 Query: 64 aaggc 68 ||||| Sbjct: 1953 aaggc 1957
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2078 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2137 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2138 ctagatcagctcatttatatcccacttcctgatg 2171 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1856 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1915 Query: 64 aaggc 68 ||||| Sbjct: 1916 aaggc 1920
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2132 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2191 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2192 ctagatcagctcatttatatcccacttcctgatg 2225 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1910 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1969 Query: 64 aaggc 68 ||||| Sbjct: 1970 aaggc 1974
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 1999 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2058 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2059 ctagatcagctcatttatatcccacttcctgatg 2092 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1777 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1836 Query: 64 aaggc 68 ||||| Sbjct: 1837 aaggc 1841
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2155 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2214 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2215 ctagatcagctcatttatatcccacttcctgatg 2248 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1933 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1992 Query: 64 aaggc 68 ||||| Sbjct: 1993 aaggc 1997
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2111 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2170 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2171 ctagatcagctcatttatatcccacttcctgatg 2204 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtt 26 ||||||||||||||||||||||| Sbjct: 1890 cctgagctgcttaccatgtggtt 1912
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2156 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2215 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2216 ctagatcagctcatttatatcccacttcctgatg 2249 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1934 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1993 Query: 64 aaggc 68 ||||| Sbjct: 1994 aaggc 1998
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2086 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2145 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2146 ctagatcagctcatttatatcccacttcctgatg 2179 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1864 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1923 Query: 64 aaggc 68 ||||| Sbjct: 1924 aaggc 1928
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2078 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2137 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2138 ctagatcagctcatttatatcccacttcctgatg 2171 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1856 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1915 Query: 64 aaggc 68 ||||| Sbjct: 1916 aaggc 1920
>dbj|AK010612.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030B05 product:transitional endoplasmic reticulum ATPase homolog [Sus scrofa domestica], full insert sequence Length = 1665 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 534 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 593 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 594 ctagatcagctcatttatatcccacttcctgatg 627 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 312 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 371 Query: 64 aaggc 68 ||||| Sbjct: 372 aaggc 376
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 1690 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 1749 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 1750 ctagatcagctcatttatatcccacttcctgatg 1783 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1468 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1527 Query: 64 aaggc 68 ||||| Sbjct: 1528 aaggc 1532
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2113 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2172 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2173 ctagatcagctcatttatatcccacttcctgatg 2206 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1891 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1950 Query: 64 aaggc 68 ||||| Sbjct: 1951 aaggc 1955
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2360 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2419 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2420 ctagatcagctcatttatatcccacttcctgatg 2453 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 2153 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 2212 Query: 64 aaggc 68 ||||| Sbjct: 2213 aaggc 2217
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2015 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2074 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2075 ctagatcagctcatttatatcccacttcctgatg 2108 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1793 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1852 Query: 64 aaggc 68 ||||| Sbjct: 1853 aaggc 1857
>emb|BX933202.2| Gallus gallus finished cDNA, clone ChEST509h23 Length = 755 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 11 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 68 ||||||||||||||||||| || ||| || |||||||| ||||||||||||||||| Sbjct: 696 tgcttaccatgtggtttggagaatctgaagccaatgtgcgcgagatctttgacaaggc 753
>dbj|AK209378.1| Mus musculus cDNA, clone:Y2G0114O17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 410 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 237 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>dbj|AK186028.1| Mus musculus cDNA, clone:Y0G0136A10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 399 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 237 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2360 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2419 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2420 ctagatcagctcatttatatcccacttcctgatg 2453 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 2153 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 2212 Query: 64 aaggc 68 ||||| Sbjct: 2213 aaggc 2217
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 85383 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 85442 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 85443 ctagatcagctcatttatatcccacttcctgatg 85476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 84947 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 85006 Query: 64 aagg 67 |||| Sbjct: 85007 aagg 85010
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 2088 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 2147 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 2148 ctagatcagctcatttatatcccacttcctgatg 2181 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1866 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1925 Query: 64 aaggc 68 ||||| Sbjct: 1926 aaggc 1930
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 119198 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 119139 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 119138 ctagatcagctcatttatatcccacttcctgatg 119105 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 119634 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 119575 Query: 64 aagg 67 |||| Sbjct: 119574 aagg 119571
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || || ||| Sbjct: 123091 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctggccgt 123032 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 123031 ctagatcagctcatttatatcccacttcctgatg 122998 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 123298 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 123239 Query: 64 aaggc 68 ||||| Sbjct: 123238 aaggc 123234
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 220 gtcttcatcattggtgctaccaacaggcc 248 ||||||||||||||||||||||||||||| Sbjct: 795648 gtcttcatcattggtgctaccaacaggcc 795676
>dbj|AK159177.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007G04 product:valosin containing protein, full insert sequence Length = 2890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 1891 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 1950 Query: 64 aaggc 68 ||||| Sbjct: 1951 aaggc 1955
>dbj|AK212503.1| Mus musculus cDNA, clone:Y2G0125C20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 333 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 175 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 234 Query: 64 aaggc 68 ||||| Sbjct: 235 aaggc 239
>ref|XM_960868.1| Encephalitozoon cuniculi GB-M1 ATPase (ECU01_1230) partial mRNA Length = 2343 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 161 ctgatagagtgctgaaccagctgctgactgagatggatgg 200 |||||||| |||||||||||||||| ||||||||||||| Sbjct: 1799 ctgatagaatgctgaaccagctgctatctgagatggatgg 1838
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 161 ctgatagagtgctgaaccagctgctgactgagatggatgg 200 |||||||| |||||||||||||||| ||||||||||||| Sbjct: 147066 ctgatagaatgctgaaccagctgctatctgagatggatgg 147027
>dbj|AK132843.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435I17 product:hypothetical protein, full insert sequence Length = 1018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 |||||||||||||||||||||||||| || |||||| ||||| || || || |||||| Sbjct: 805 cctgagctgcttaccatgtggtttggggaatctgaggccaatgtccgggaaatttttgac 746 Query: 64 aagg 67 |||| Sbjct: 745 aagg 742
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 ||||||||||| ||||||||||| |||||||||| Sbjct: 2087 cttgatcagctcatctacatcccacttcctgatg 2120 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 ||||||||||| |||||||||||||| Sbjct: 1805 cctgagctgctcaccatgtggtttgg 1830
>dbj|AK216904.1| Mus musculus cDNA, clone:Y2G0139P13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtttgg 200
>dbj|AK216170.1| Mus musculus cDNA, clone:Y2G0137H05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtttgg 200
>dbj|AK209215.1| Mus musculus cDNA, clone:Y2G0114F19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 408 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || ||||| | || || || | ||| Sbjct: 178 atcattggagctaccaacaggcctgacatcattgatcctgctatcctaagacctgcccgt 237 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 238 ctagatcagctcatttatatcccacttcctgatg 271
>dbj|AK207257.1| Mus musculus cDNA, clone:Y2G0107G23, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 396 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 226 atcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgt 285 |||||||| |||||||||||||| |||||||| || || || | || || || || ||| Sbjct: 17 atcattggagctaccaacaggcctgacatcattgatccagctatcctaagacctggccgt 76 Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 || |||||||| || || ||||| |||||||||| Sbjct: 77 ctagatcagctcatttatatcccacttcctgatg 110
>dbj|AK205742.1| Mus musculus cDNA, clone:Y2G0102K06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtttgg 200
>dbj|AK204815.1| Mus musculus cDNA, clone:Y1G0149L07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtttgg 200
>dbj|AK198469.1| Mus musculus cDNA, clone:Y1G0128E09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtttgg 200
>dbj|AK186814.1| Mus musculus cDNA, clone:Y0G0138N13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 222 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||||||||||| Sbjct: 176 cctgagctgcttaccatgtggtttgg 201
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 ||||||||||| ||||||||||| |||||||||| Sbjct: 2093 cttgatcagctcatctacatcccacttcctgatg 2126 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 ||||||||||| |||||||||||||| Sbjct: 1811 cctgagctgctcaccatgtggtttgg 1836
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 286 cttgatcagcttatctacatccctcttcctgatg 319 ||||||||||| ||||||||||| |||||||||| Sbjct: 2087 cttgatcagctcatctacatcccacttcctgatg 2120 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 ||||||||||| |||||||||||||| Sbjct: 1805 cctgagctgctcaccatgtggtttgg 1830
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA Length = 3258 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| || ||| | || ||||| ||| Sbjct: 1894 cctgagctgctcaccatgtggtttggagagtctgaggccaacgtgagggaaatcttcgac 1953 Query: 64 aaggc 68 ||||| Sbjct: 1954 aaggc 1958 Score = 42.1 bits (21), Expect = 1.7 Identities = 114/145 (78%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | ||||| | ||| || |||||||| Sbjct: 2065 aaccagatcctgacagaaatggatggcatgtccacaaagaaaaatgtatttatcattggc 2124 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||| ||| | || |||||||| || |||||| | || | || || || ||||||||| Sbjct: 2125 gctactaaccgacctgacatcattgatcctgccatcctgcgacctggccgccttgatcag 2184 Query: 295 cttatctacatccctcttcctgatg 319 || ||||| ||||| ||||| |||| Sbjct: 2185 ctcatctatatcccgcttcccgatg 2209 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 434 accgaaatttgccagcgtgcttgcaagt 461 ||||| |||||||| ||||||||||||| Sbjct: 2323 accgagatttgccaacgtgcttgcaagt 2350
>ref|XM_322103.1| Neurospora crassa OR74A hypothetical protein (NCU00018.1) partial mRNA Length = 2475 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||| || || || ||||| ||||||| | ||||||||| ||| ||| | |||||| Sbjct: 1867 aaccagcttcttaccgaaatggacggcatgacctccaagaagaatgttttcgttattggt 1926 Query: 235 gctaccaac 243 ||||||||| Sbjct: 1927 gctaccaac 1935
>ref|XM_951912.1| Neurospora crassa OR74A hypothetical protein (NCU00018.1) partial mRNA Length = 2475 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||| || || || ||||| ||||||| | ||||||||| ||| ||| | |||||| Sbjct: 1867 aaccagcttcttaccgaaatggacggcatgacctccaagaagaatgttttcgttattggt 1926 Query: 235 gctaccaac 243 ||||||||| Sbjct: 1927 gctaccaac 1935
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1769 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1828 Query: 64 aaggc 68 ||||| Sbjct: 1829 aaggc 1833
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1844 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1903 Query: 64 aaggc 68 ||||| Sbjct: 1904 aaggc 1908
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1903 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1962 Query: 64 aaggc 68 ||||| Sbjct: 1963 aaggc 1967
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| ||| || ||||| | || ||||||||| Sbjct: 1901 cctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgac 1960 Query: 64 aaggc 68 ||||| Sbjct: 1961 aaggc 1965
>gb|BC044980.1| Xenopus laevis hypothetical protein MGC52979, mRNA (cDNA clone MGC:52979 IMAGE:4930716), complete cds Length = 4033 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 173 tgaaccagctgctgactgagatgga 197 ||||||||||||||||||||||||| Sbjct: 2137 tgaaccagctgctgactgagatgga 2161
>ref|XM_662183.1| Cryptosporidium hominis TU502 cell division cycle protein 48 (Chro.10043) partial mRNA Length = 2445 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1 ggacctgagctgcttaccatgtggtttggtgagagtgaggc 41 ||||| ||||| |||||| | |||||||||||||||||||| Sbjct: 1672 ggacccgagcttcttaccttatggtttggtgagagtgaggc 1712
>gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 63 ||||||||||| |||||||||||||| ||| |||||| || ||| | || ||||| ||| Sbjct: 1894 cctgagctgctcaccatgtggtttggagagtctgaggccaacgtgagggaaatcttcgac 1953 Query: 64 aaggc 68 ||||| Sbjct: 1954 aaggc 1958 Score = 42.1 bits (21), Expect = 1.7 Identities = 114/145 (78%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| || |||||||||||| | | ||||| | ||| || |||||||| Sbjct: 2065 aaccagatcctgacagaaatggatggcatgtccacaaagaaaaatgtatttatcattggc 2124 Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagggcgtcttgatcag 294 ||||| ||| | || |||||||| || |||||| | || | || || || ||||||||| Sbjct: 2125 gctactaaccgacctgacatcattgatcctgccatcctgcgacctggccgccttgatcag 2184 Query: 295 cttatctacatccctcttcctgatg 319 || ||||| ||||| ||||| |||| Sbjct: 2185 ctcatctatatcccgcttcccgatg 2209 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 434 accgaaatttgccagcgtgcttgcaagt 461 ||||| |||||||| ||||||||||||| Sbjct: 2323 accgagatttgccaacgtgcttgcaagt 2350
>ref|XM_752110.1| Ustilago maydis 521 hypothetical protein (UM01056.1) partial mRNA Length = 2469 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 220 gtcttcatcattggtgctaccaac 243 |||||||||||||||||||||||| Sbjct: 1846 gtcttcatcattggtgctaccaac 1869 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcg 50 ||||||||||| ||||||||||| |||||| |||||||| ||||| Sbjct: 1630 cctgagctgctcaccatgtggttcggtgagtcggaggctaacgtgcg 1676
>ref|XM_455337.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05676g predicted mRNA Length = 2493 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccaga 251 |||||||| |||||||||||||||| || ||| | |||||||| || ||||| ||||| Sbjct: 1852 atggatggtatgaacgccaagaagaacgttttcgttattggtgccactaacagaccaga 1910
>ref|XM_750952.1| Aspergillus fumigatus Af293 cell division control protein Cdc48 (Afu2g17110) partial mRNA Length = 2460 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||||| || ||||| ||||| ||||||| | ||||||| ||| ||| |||| ||| Sbjct: 1861 aaccagcttcttactgaaatggacggcatgacgtcgaagaagaatgtgttcgtcatcggt 1920 Query: 235 gctaccaacag 245 ||||||||||| Sbjct: 1921 gctaccaacag 1931
>ref|XM_780555.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC580502), mRNA Length = 2313 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 80 caccatgtgtcctcttctttgatgagcttga 110 |||||||||| ||||||||||||||||||| Sbjct: 1970 caccatgtgtaatcttctttgatgagcttga 2000
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 193 atggatggcatgaacgccaagaagactgtcttcatcattggtgctaccaacaggccaga 251 |||||||| |||||||||||||||| || ||| | |||||||| || ||||| ||||| Sbjct: 554047 atggatggtatgaacgccaagaagaacgttttcgttattggtgccactaacagaccaga 553989
>gb|AE010137.1| Pyrococcus furiosus DSM 3638, section 12 of 173 of the complete genome Length = 11952 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 235 gctaccaacaggccagacatcatcgaccctgcccttcttaggccagg 281 ||||| ||||||||||||||| |||| ||||| ||||| || ||||| Sbjct: 11038 gctactaacaggccagacatcctcgatcctgctcttctcagaccagg 10992
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 227 tcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagg 281 |||||||||| ||||||||||| ||||| ||||| || || || || |||||||| Sbjct: 1016749 tcattggtgccaccaacaggccggacattatcgatccagcactcctcaggccagg 1016803 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 227 tcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagg 281 |||||||||| ||||||||||| ||||| ||||| || || || || |||||||| Sbjct: 572616 tcattggtgccaccaacaggccggacattatcgatccagcactcctcaggccagg 572562
>dbj|AK215003.1| Mus musculus cDNA, clone:Y2G0133K12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtt 26 ||||||||||||||||||||||| Sbjct: 175 cctgagctgcttaccatgtggtt 197
>dbj|AB018433.1| Pyrococcus kodakaraensis Pk-cdcA gene, complete cds Length = 2880 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 227 tcattggtgctaccaacaggccagacatcatcgaccctgcccttcttaggccagg 281 |||||||||| ||||||||||| ||||| ||||| || || || || |||||||| Sbjct: 2186 tcattggtgccaccaacaggccggacattatcgatccagcactcctcaggccagg 2240
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatgg 200 ||||||||||| |||||||||||||| Sbjct: 892566 aaccagctgctcactgagatggatgg 892591 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gctgaaccagctgctgactgagatggatgg 200 |||||||||||| ||||| ||||||||||| Sbjct: 305122 gctgaaccagctcctgacggagatggatgg 305151
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 175 aaccagctgctgactgagatggatgg 200 |||||||| ||||||||||||||||| Sbjct: 1952267 aaccagctcctgactgagatggatgg 1952242
>ref|XM_472796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1755 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatgg 200 ||||||||||| |||||||||||||| Sbjct: 1252 aaccagctgcttactgagatggatgg 1277
>gb|DQ145270.1| Drosophila miranda neo-X TER94 gene, partial sequence Length = 1221 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Plus Query: 7 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaag 66 |||||||| ||||||||||| || ||| |||||| || ||||| || ||||| |||||| Sbjct: 697 gagctgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgacaag 756 Query: 67 gc 68 || Sbjct: 757 gc 758
>ref|XM_658503.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5991.2), mRNA Length = 3534 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 ccatgtgtcctcttctttgatgagcttgac 111 |||||| ||||||||||||||||| ||||| Sbjct: 2686 ccatgtatcctcttctttgatgagtttgac 2715
>ref|XM_653878.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1366.2), mRNA Length = 1887 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 accatgtgtcctcttctttgatgagcttga 110 |||||||||| | ||||||||||||||||| Sbjct: 1383 accatgtgtcattttctttgatgagcttga 1412
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 68 ||||||||||||||| |||||| || ||||| || || ||||||||||| Sbjct: 1676 atgtggtttggtgagtctgaggcaaacgtgcgggacatttttgacaaggc 1725
>gb|BC046949.1| Xenopus laevis valosin containing protein, mRNA (cDNA clone MGC:52611 IMAGE:5571505), complete cds Length = 3148 Score = 44.1 bits (22), Expect = 0.43 Identities = 79/98 (80%) Strand = Plus / Plus Query: 211 aagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccctt 270 ||||||| |||||||||||| || || || ||||| ||||| ||||| ||||| ||| | Sbjct: 1991 aagaagaatgtcttcatcatcggagccacaaacagaccagatatcattgaccccgccatc 2050 Query: 271 cttaggccagggcgtcttgatcagcttatctacatccc 308 || | || || ||||| |||||||| || |||||||| Sbjct: 2051 ctgcgtcctggccgtctagatcagctcatttacatccc 2088 Score = 44.1 bits (22), Expect = 0.43 Identities = 70/86 (81%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| ||| |||||| || || || ||||| ||||| |||||| || | | Sbjct: 1799 atgtggtttggagagtctgaggccaacgtccgagagatatttgataaggctcggcaggct 1858 Query: 79 gcaccatgtgtcctcttctttgatga 104 || || |||||||||||||||||||| Sbjct: 1859 gctccctgtgtcctcttctttgatga 1884
>emb|BX028304.1|CNS08U04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 44.1 bits (22), Expect = 0.43 Identities = 70/86 (81%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| |||||||| |||||| || ||||||| || |||||||| || Sbjct: 623 aaccagatcctgaccgagatggacggcatgggggcgaagaagaacgtgttcatcatcggg 682 Query: 235 gctaccaacaggccagacatcatcga 260 || |||||| |||| ||||||||||| Sbjct: 683 gcgaccaaccggccggacatcatcga 708
>emb|X54240.1|XLP9715S X.laevis mRNA for p97 subunit of 15S Mg(2+)-ATPase Length = 3286 Score = 44.1 bits (22), Expect = 0.43 Identities = 79/98 (80%) Strand = Plus / Plus Query: 211 aagaagactgtcttcatcattggtgctaccaacaggccagacatcatcgaccctgccctt 270 ||||||| |||||||||||| || || || ||||| ||||| ||||| ||||| ||| | Sbjct: 2140 aagaagaatgtcttcatcatcggagccacaaacagaccagatatcattgaccccgccatc 2199 Query: 271 cttaggccagggcgtcttgatcagcttatctacatccc 308 || | || || ||||| |||||||| || |||||||| Sbjct: 2200 ctgcgtcctggccgtctagatcagctcatttacatccc 2237 Score = 44.1 bits (22), Expect = 0.43 Identities = 70/86 (81%) Strand = Plus / Plus Query: 19 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtca 78 ||||||||||| ||| |||||| || || || ||||| ||||| |||||| || | | Sbjct: 1948 atgtggtttggagagtctgaggccaacgtccgagagatatttgataaggctcggcaggct 2007 Query: 79 gcaccatgtgtcctcttctttgatga 104 || || |||||||||||||||||||| Sbjct: 2008 gctccctgtgtcctcttctttgatga 2033
>gb|AC157502.2| Medicago truncatula chromosome 7 BAC clone mte1-56e23, complete sequence Length = 108844 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 82 ccatgtgtcctcttctttgatgagcttgactctattgc 119 ||||||||| ||||||||||||| ||||| ||| |||| Sbjct: 54632 ccatgtgtcatcttctttgatgaacttgattctcttgc 54669
>dbj|AK214913.1| Mus musculus cDNA, clone:Y2G0133G06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 |||||||||||||||||| ||||||| Sbjct: 175 cctgagctgcttaccatgcggtttgg 200
>dbj|AK189172.1| Mus musculus cDNA, clone:Y0G0148B22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cctgagctgcttaccatgtggtttgg 29 ||||||||||||||||| |||||||| Sbjct: 175 cctgagctgcttaccatttggtttgg 200
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 44.1 bits (22), Expect = 0.43 Identities = 70/86 (81%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcatgaacgccaagaagactgtcttcatcattggt 234 |||||| | ||||| |||||||| |||||| || ||||||| || |||||||| || Sbjct: 1795 aaccagatcctgaccgagatggacggcatgggggcgaagaagaacgtgttcatcatcggg 1854 Query: 235 gctaccaacaggccagacatcatcga 260 || |||||| |||| ||||||||||| Sbjct: 1855 gcgaccaaccggccggacatcatcga 1880
>dbj|AK064543.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-A09, full insert sequence Length = 2112 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatgg 200 ||||||||||| |||||||||||||| Sbjct: 24 aaccagctgcttactgagatggatgg 49
>dbj|AK113049.1| Ciona intestinalis cDNA, clone:ciad002b13, full insert sequence Length = 2972 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 16 accatgtggtttggtgagagtgaggctaatgtgcgtga 53 ||||||||||||||||| |||||||||||| ||||| Sbjct: 1739 accatgtggtttggtgaatctgaggctaatgtccgtga 1776
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 259 gaccctgcccttcttaggccagggcgtcttgatcagct 296 |||||||||||||| ||||| |||||| ||||| |||| Sbjct: 330696 gaccctgcccttctcaggcctgggcgttttgatgagct 330659 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgc 119 |||||||||||||| | ||||||||||| Sbjct: 570732 tcttctttgatgagatcgactctattgc 570759
>ref|NM_100181.3| Arabidopsis thaliana PEX6 (PEROXIN6); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G03000 (PEX6) mRNA, complete cds Length = 2998 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 2284 tcttctttgatgagcttgattctcttgct 2312
>gb|BT023906.1| Drosophila melanogaster GH18655 full insert cDNA Length = 3075 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 1322 agtacgccatcagggagaaca 1342
>gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete sequence Length = 164565 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 154971 agtacgccatcagggagaaca 154951
>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence Length = 194892 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tacccagagaggaagcagtgt 140 ||||||||||||||||||||| Sbjct: 67963 tacccagagaggaagcagtgt 67983
>gb|AY333116.1| Arabidopsis thaliana AAA family ATPase peroxin 6 mRNA, complete cds Length = 3029 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 2301 tcttctttgatgagcttgattctcttgct 2329
>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence Length = 230218 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 tacccagagaggaagcagtgt 140 ||||||||||||||||||||| Sbjct: 71692 tacccagagaggaagcagtgt 71672
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 3552 tcttctttgatgagcttgattctcttgct 3580
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 229 attggtgctaccaacaggccagacatcatcgaccctgccct 269 |||| ||| ||||||||||| ||||| ||||| |||||||| Sbjct: 2141119 attgctgccaccaacaggccggacatgatcgatcctgccct 2141079
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene Length = 40050 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ttggtgagagtgaggctaatgtgcg 50 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|BX014465.1|CNS08JBP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 957 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 aaccagctgctgactgagatggatggcat 203 |||||||||||||| |||||||| ||||| Sbjct: 673 aaccagctgctgacggagatggacggcat 645
>emb|BX014464.1|CNS08JBO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcat 203 |||||||||||||| |||||||| ||||| Sbjct: 809 aaccagctgctgacggagatggacggcat 837
>emb|Z71605.1|SCYNL329C S.cerevisiae chromosome XIV reading frame ORF YNL329c Length = 4135 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ttggtgagagtgaggctaatgtgcg 50 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|Z48502.1|SC9532X S.cerevisiae chromosome XIII cosmid 9532 Length = 24105 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 tttggtgagagtgaggctaat 45 ||||||||||||||||||||| Sbjct: 12805 tttggtgagagtgaggctaat 12825
>emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, N0305 & N0310 genes Length = 8223 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ttggtgagagtgaggctaatgtgcg 50 ||||||||||||| ||||||||||| Sbjct: 6228 ttggtgagagtgaagctaatgtgcg 6204
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 gcaccagatcttcaaagcttg 350 ||||||||||||||||||||| Sbjct: 3397624 gcaccagatcttcaaagcttg 3397604
>emb|AJ006524.1|DME6524 Drosophila melanogaster coatomer beta-prime subunit gene Length = 3472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 1503 agtacgccatcagggagaaca 1523
>emb|AJ006523.1|DME6523 Drosophila melanogaster mRNA for the coatomer beta-prime subunit Length = 3057 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 1323 agtacgccatcagggagaaca 1343
>gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map CIC11A04, complete sequence Length = 93212 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 aagaagactgtcttcatcatt 231 ||||||||||||||||||||| Sbjct: 52493 aagaagactgtcttcatcatt 52473
>ref|NM_080097.2| Drosophila melanogaster '-coatomer protein CG6699-RA (beta'Cop), mRNA Length = 3080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 1336 agtacgccatcagggagaaca 1356
>gb|AY078962.1| Arabidopsis thaliana At1g03000/F22D16.27 mRNA, complete cds Length = 3082 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 2368 tcttctttgatgagcttgattctcttgct 2396
>ref|XM_627893.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase ortholog,transcripts identified by EST (cgd1_330), partial mRNA Length = 2463 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 cttaccatgtggtttggtgagagtgaggc 41 |||||| | |||||||||||||||||||| Sbjct: 1702 cttaccttatggtttggtgagagtgaggc 1730
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 |||||||||||||| ||||||| |||||| Sbjct: 4364216 tcttctttgatgagattgactccattgct 4364244
>gb|AC009340.4|AC009340 Drosophila melanogaster, chromosome 2L, region 34A-34E, BAC clone BACR04E19, complete sequence Length = 197159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 169591 agtacgccatcagggagaaca 169611
>ref|XM_316268.2| Anopheles gambiae str. PEST ENSANGP00000020514 (ENSANGG00000018025), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aaccagctgctgactgagatggatggcat 203 |||||||||||||| |||||||| ||||| Sbjct: 808 aaccagctgctgacggagatggacggcat 836
>gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 sequence, complete sequence Length = 78341 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 76574 tcttctttgatgagcttgattctcttgct 76602
>gb|AE003639.3| Drosophila melanogaster chromosome 2L, section 48 of 83 of the complete sequence Length = 261775 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 259691 agtacgccatcagggagaaca 259711
>gb|AC005443.1|AC005443 Drosophila melanogaster, chromosome 2L, region 34B5-34B9, P1 clone DS05554, complete sequence Length = 81194 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 agtacgccatcagggagaaca 479 ||||||||||||||||||||| Sbjct: 72261 agtacgccatcagggagaaca 72281
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 gtgctgaaccagctgctgactgagatgga 197 ||||| |||||||| |||||||||||||| Sbjct: 1889397 gtgctcaaccagcttctgactgagatgga 1889425
>emb|CT033065.1| Platynereis dumerilii EST IB0AAA27BE08EM1 Length = 895 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 223 ttcatcattggtgctaccaacaggccagacatcatcgaccctgcc 267 ||||||||||| || || ||||| || |||||||| ||||||||| Sbjct: 806 ttcatcattggagccacaaacagacctgacatcattgaccctgcc 850
>gb|BT001151.1| Arabidopsis thaliana At1g03000/F22D16.27 mRNA, complete cds Length = 2826 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tcttctttgatgagcttgactctattgct 120 ||||||||||||||||||| ||| ||||| Sbjct: 2261 tcttctttgatgagcttgattctcttgct 2289
>gb|L20789.1|YSCPAS8A Yeast PAS8 gene, complete cds Length = 3807 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ttggtgagagtgaggctaatgtgcg 50 ||||||||||||| ||||||||||| Sbjct: 2887 ttggtgagagtgaagctaatgtgcg 2911
>ref|XM_364454.1| Magnaporthe grisea 70-15 hypothetical protein (MG09299.4) partial mRNA Length = 3753 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 atcgaccctgcccttcttaggccagggcgtct 287 ||||||||||| || || |||||||||||||| Sbjct: 3007 atcgaccctgctctactgaggccagggcgtct 3038
>gb|AC124184.3| Mus musculus BAC clone RP23-227N23 from 10, complete sequence Length = 182135 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 4835 accagcagctgactgagatggatg 4812
>gb|AC117659.7| Mus musculus, clone RP23-316N7, complete sequence Length = 196981 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 96217 accagcagctgactgagatggatg 96240
>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the Mylc2a gene for myosin light chain, regulatory A, the Gck gene for glucokinase, a novel gene, the gene for prenylated SNARE protein (Ykt6), the Camk2d gene for calcium/calmodulin-dependent protein kinase II delta and two CpG islands, complete sequence Length = 172356 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gctacccagagaggaagcag 137 |||||||||||||||||||| Sbjct: 1625 gctacccagagaggaagcag 1644
>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the Mrps24 gene for mitochondrial ribosomal protein S24, a novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d) pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene for phosphoglycerate mutase 2, a pseudogene similar to part of H+ transporting mitochondrial F0 complex ATP synthase subunit F Atp5j, the Polm gene for polymerase (DNA directed) mu, the Aebp1 gene for AE binding protein 1, the Pold2 gene for polymerase (DNA directed) delta 2 regulatory subunit, novel gene (1600028I17Rik) and seven CpG islands, complete sequence Length = 195129 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gctacccagagaggaagcag 137 |||||||||||||||||||| Sbjct: 194754 gctacccagagaggaagcag 194773
>emb|BX072541.1| Mouse DNA sequence from clone RP23-189G9 on chromosome 4 Contains a novel gene and a aldo-keto reductase family 1 member B8 (Akr1b8) pseudogene, complete sequence Length = 179699 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 74627 accagcagctgactgagatggatg 74604
>gb|AC134333.3| Mus musculus BAC clone RP24-140M19 from chromosome 10, complete sequence Length = 137079 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 108789 accagcagctgactgagatggatg 108766
>emb|BX950212.4| Mouse DNA sequence from clone RP24-342N13 on chromosome 2, complete sequence Length = 9870 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 7119 accagcagctgactgagatggatg 7142
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 tgaaccagctgctgactgagatggatgg 200 |||| ||| ||||||||||||||||||| Sbjct: 27342796 tgaatcagttgctgactgagatggatgg 27342769
>dbj|AK181023.1| Mus musculus cDNA, clone:Y0G0116K19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 287 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctgcttaccatgtggtttgg 29 |||||||||||||||||||| Sbjct: 247 ctgcttaccatgtggtttgg 266
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 tgaaccagctgctgactgagatggatgg 200 |||| ||| ||||||||||||||||||| Sbjct: 85623 tgaatcagttgctgactgagatggatgg 85596
>dbj|AK173462.1| Ciona intestinalis cDNA, clone:cieg017i02, full insert sequence Length = 1803 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atctacatccctcttcctga 317 |||||||||||||||||||| Sbjct: 1203 atctacatccctcttcctga 1222
>emb|AL672205.7| Mouse DNA sequence from clone RP23-149B17 on chromosome X, complete sequence Length = 220464 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 ||||||||||||||||||| |||| Sbjct: 186535 accagctgctgactgagatagatg 186512
>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete sequence Length = 93822 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 2753 accagcagctgactgagatggatg 2730
>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full insert sequence Length = 2183 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tgaaccagctgctgactgagatggatgg 200 |||| ||| ||||||||||||||||||| Sbjct: 1016 tgaatcagttgctgactgagatggatgg 1043
>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full insert sequence Length = 2433 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tgaaccagctgctgactgagatggatgg 200 |||| ||| ||||||||||||||||||| Sbjct: 1266 tgaatcagttgctgactgagatggatgg 1293
>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full insert sequence Length = 2276 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tgaaccagctgctgactgagatggatgg 200 |||| ||| ||||||||||||||||||| Sbjct: 1076 tgaatcagttgctgactgagatggatgg 1103
>gb|AC155334.7| Mus musculus 6 BAC RP24-420O24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153509 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 ||||||| |||||||||||||||| Sbjct: 110043 accagctactgactgagatggatg 110020
>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence Length = 166952 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 139199 accagcagctgactgagatggatg 139222
>dbj|AK113028.1| Ciona intestinalis cDNA, clone:citb036i18, full insert sequence Length = 1757 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atctacatccctcttcctga 317 |||||||||||||||||||| Sbjct: 1151 atctacatccctcttcctga 1170
>emb|AL928604.9| Mouse DNA sequence from clone RP23-220K22 on chromosome 2, complete sequence Length = 181572 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 accagctgctgactgagatggatg 199 |||||| ||||||||||||||||| Sbjct: 114602 accagcagctgactgagatggatg 114579 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,167,703 Number of Sequences: 3902068 Number of extensions: 4167703 Number of successful extensions: 93174 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92238 Number of HSP's gapped (non-prelim): 882 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
