ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470559.1| Oryza sativa (japonica cultivar-group), predic... 242 8e-61
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 242 8e-61
3gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 242 8e-61
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 242 8e-61
5dbj|AK067631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
6dbj|AK065516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
7emb|AJ315791.1|OSA315791 Oryza sativa mRNA for SAP-like protein ... 234 2e-58
8emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP... 234 2e-58
9gb|AY105224.1| Zea mays PCO102615 mRNA sequence 208 1e-50
10gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 44 0.38
11gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 44 0.38
12gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 44 0.38
13gb|CP000001.1| Bacillus cereus E33L, complete genome 44 0.38
14gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 44 0.38
15gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosom... 42 1.5
16ref|XM_752554.1| Ustilago maydis 521 hypothetical protein (UM015... 42 1.5
17emb|AL360014.30| Human DNA sequence from clone RP11-575I8 on chr... 42 1.5
18gb|AC012507.9| Homo sapiens BAC clone RP11-499P1 from 2, complet... 42 1.5
19ref|NM_072418.1| Caenorhabditis elegans Serpentine Receptor, cla... 42 1.5
20gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete seq... 42 1.5
21gb|AF022972.1| Caenorhabditis elegans cosmid F10D2, complete seq... 42 1.5
22gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 1.5
23gb|AC131232.12| Mus musculus chromosome 8, clone RP24-376E20, co... 42 1.5
24ref|XM_639911.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
25ref|XM_870442.1| PREDICTED: Bos taurus similar to IQ motif conta... 40 5.9
26gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568... 40 5.9
27gb|AC069008.6| Homo sapiens BAC clone RP11-815N20 from 7, comple... 40 5.9
28gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, comp... 40 5.9
29emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16... 40 5.9
30gb|AC162873.4| Mus musculus chromosome 1, clone RP24-313G16, com... 40 5.9
31gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell ... 40 5.9
32gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell ... 40 5.9
33ref|NM_171830.1| Homo sapiens potassium large conductance calciu... 40 5.9
34gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence 40 5.9
35gb|BC113851.1| Homo sapiens cDNA clone IMAGE:40024631, containin... 40 5.9
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
37gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Canc... 40 5.9
38gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Can... 40 5.9
39gb|AF204161.1|AF204161 Homo sapiens potassium large conductance ... 40 5.9
40dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09... 40 5.9
41emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chr... 40 5.9
42gb|AF139471.1|AF139471 Homo sapiens putative calcium-activated p... 40 5.9
43dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 40 5.9
45dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.9
46gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, comple... 40 5.9
47gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, com... 40 5.9
48dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 5.9
49dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 5.9
50emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2... 40 5.9 
>ref|XM_470559.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1902

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
           ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 342 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 401

                                                                       
Query: 96  caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
           ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 402 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 461

                                                                       
Query: 156 gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
           |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 462 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 521

                                                                       
Query: 216 tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
           |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 522 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 581

                                                                       
Query: 276 gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
           ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 582 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 641

                                                     
Query: 336 gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
            |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 642 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 683
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Minus

                                                                           
Query: 36      tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
               ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 4342085 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 4342026

                                                                           
Query: 96      caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
               ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 4342025 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 4341966

                                                                           
Query: 156     gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
               |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 4341965 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 4341906

                                                                           
Query: 216     tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
               |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 4341905 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 4341846

                                                                           
Query: 276     gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
               ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 4341845 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 4341786

                                                         
Query: 336     gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
                |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 4341785 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 4341744
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Plus

                                                                         
Query: 36    tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
             ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 84412 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 84471

                                                                         
Query: 96    caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
             ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 84472 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 84531

                                                                         
Query: 156   gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
             |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 84532 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 84591

                                                                         
Query: 216   tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
             |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 84592 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 84651

                                                                         
Query: 276   gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
             ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 84652 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 84711

                                                       
Query: 336   gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
              |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 84712 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 84753
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Minus

                                                                           
Query: 36      tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
               ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 4342200 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 4342141

                                                                           
Query: 96      caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
               ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 4342140 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 4342081

                                                                           
Query: 156     gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
               |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 4342080 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 4342021

                                                                           
Query: 216     tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
               |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 4342020 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 4341961

                                                                           
Query: 276     gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
               ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 4341960 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 4341901

                                                         
Query: 336     gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
                |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 4341900 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 4341859
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>dbj|AK067631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112F11, full
           insert sequence
          Length = 3298

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
           ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 328 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 387

                                                                       
Query: 96  caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
           ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 388 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 447

                                                                       
Query: 156 gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
           |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 448 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 507

                                                                       
Query: 216 tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
           |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 508 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 567

                                                                       
Query: 276 gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
           ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 568 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 627

                                                     
Query: 336 gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
            |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 628 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 669
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>dbj|AK065516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O15, full
           insert sequence
          Length = 1668

 Score =  242 bits (122), Expect = 8e-61
 Identities = 287/342 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
           ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 340 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 399

                                                                       
Query: 96  caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
           ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 400 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 459

                                                                       
Query: 156 gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
           |||||||||||||||||| ||  ||||||||||||||||||| | |||||| ||||||||
Sbjct: 460 gtttaaaagggttcaagcacaattgcgagcaaggggaaaagggaaggaggagaagaagcc 519

                                                                       
Query: 216 tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
           |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 520 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 579

                                                                       
Query: 276 gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
           ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 580 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 639

                                                     
Query: 336 gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
            |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 640 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 681
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>emb|AJ315791.1|OSA315791 Oryza sativa mRNA for SAP-like protein (BP-73 gene)
          Length = 1624

 Score =  234 bits (118), Expect = 2e-58
 Identities = 286/342 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
           ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 447 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 506

                                                                       
Query: 96  caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
           ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 507 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 566

                                                                       
Query: 156 gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
           |||||||||||||||||| ||  ||||||||||||| ||||| | |||||| ||||||||
Sbjct: 567 gtttaaaagggttcaagcacaattgcgagcaagggggaaagggaaggaggagaagaagcc 626

                                                                       
Query: 216 tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
           |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 627 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 686

                                                                       
Query: 276 gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
           ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 687 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 746

                                                     
Query: 336 gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
            |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 747 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 788
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>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein
          Length = 5896

 Score =  234 bits (118), Expect = 2e-58
 Identities = 286/342 (83%)
 Strand = Plus / Plus

                                                                        
Query: 36   tgatgaatttgatagtgatacagtatcctccaaaaatggaccacctatatctttgacaag 95
            ||||||||| |||| |||||   | |||||||||||||||||||| || |||||||||||
Sbjct: 4736 tgatgaattcgatactgatattatgtcctccaaaaatggaccacccatctctttgacaag 4795

                                                                        
Query: 96   caactcacgtccccatgcaacatcagctccaggggaaagggagaaggagattgtagaact 155
            ||| || ||||| || ||||||||||  ||||||||||| ||||||||||| |||||  |
Sbjct: 4796 caattcccgtcctcaagcaacatcagtcccaggggaaagagagaaggagatagtagagtt 4855

                                                                        
Query: 156  gtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcagggaggacaagaagcc 215
            |||||||||||||||||| ||  ||||||||||||| ||||| | |||||| ||||||||
Sbjct: 4856 gtttaaaagggttcaagcacaattgcgagcaagggggaaagggaaggaggagaagaagcc 4915

                                                                        
Query: 216  tgaacctgcaaaatctcagggcgagaggggaagtgtcgattcccttcttaatttgctcag 275
            |||||  |||||| | ||||| |||||||| ||||| || |||||||| ||| |||| ||
Sbjct: 4916 tgaacaagcaaaagcacagggtgagaggggcagtgttgactcccttctaaatctgcttag 4975

                                                                        
Query: 276  gagacactcggtggaccaaaaacgaaagagcagcgatgagaaagaacagaattttgatca 335
            ||  ||||| |||||||||  | | |||||| | |||||||||||||||| | |||| ||
Sbjct: 4976 gaagcactcagtggaccaacgaaggaagagcggtgatgagaaagaacagagtgttgacca 5035

                                                      
Query: 336  gacatggagaagcagtgattctggaaacaagcaaagttcaag 377
             |||  |||||||| ||| |||||||| || |||| ||||||
Sbjct: 5036 aacaaagagaagcaatgaatctggaaataaacaaaattcaag 5077
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>gb|AY105224.1| Zea mays PCO102615 mRNA sequence
          Length = 1561

 Score =  208 bits (105), Expect = 1e-50
 Identities = 232/273 (84%), Gaps = 1/273 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  gactctgagnaacaatgatgaatttgatagtgatacagtatcctccaaaaatggaccacc 80
           ||||||||| |||| ||||||||||||||||||||   | | |||||| ||||| |||||
Sbjct: 373 gactctgag-aacattgatgaatttgatagtgatatcatgttctccaagaatgggccacc 431

                                                                       
Query: 81  tatatctttgacaagcaactcacgtccccatgcaacatcagctccaggggaaagggagaa 140
            || |||||| ||||||| || ||||| || || ||||| ||||| |||||||| |||||
Sbjct: 432 aatctctttggcaagcaattcccgtcctcaagccacatcggctcctggggaaagagagaa 491

                                                                       
Query: 141 ggagattgtagaactgtttaaaagggttcaagcgcagctgcgagcaaggggaaaaggcag 200
           |||||| || ||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||
Sbjct: 492 ggagatcgtggaactctttaaaagggttcaagcacagctgcgagctagggggaaaagcag 551

                                                                       
Query: 201 ggaggacaagaagcctgaacctgcaaaatctcagggcgagaggggaagtgtcgattccct 260
           ||| |||||||||||||||| |||||||   ||||| || ||||| ||||| ||||| ||
Sbjct: 552 ggaagacaagaagcctgaacatgcaaaagtgcagggtgaaaggggcagtgttgattcact 611

                                            
Query: 261 tcttaatttgctcaggagacactcggtggacca 293
           |||| | |||||||||| |||||| ||||||||
Sbjct: 612 tcttcagttgctcaggaaacactctgtggacca 644
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tggaccaaaaacgaaagagcag 308
               ||||||||||||||||||||||
Sbjct: 4055002 tggaccaaaaacgaaagagcag 4054981
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tggaccaaaaacgaaagagcag 308
               ||||||||||||||||||||||
Sbjct: 4067168 tggaccaaaaacgaaagagcag 4067147
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tggaccaaaaacgaaagagcag 308
               ||||||||||||||||||||||
Sbjct: 4067541 tggaccaaaaacgaaagagcag 4067520
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tggaccaaaaacgaaagagcag 308
               ||||||||||||||||||||||
Sbjct: 4109229 tggaccaaaaacgaaagagcag 4109208
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tggaccaaaaacgaaagagcag 308
               ||||||||||||||||||||||
Sbjct: 4067041 tggaccaaaaacgaaagagcag 4067020
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>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence
          Length = 235813

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   agattgtagaactgtttaaaa 163
             |||||||||||||||||||||
Sbjct: 99557 agattgtagaactgtttaaaa 99537
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>ref|XM_752554.1| Ustilago maydis 521 hypothetical protein (UM01500.1) partial mRNA
          Length = 849

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 126 aggggaaagggagaaggagat 146
           |||||||||||||||||||||
Sbjct: 580 aggggaaagggagaaggagat 560
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>emb|AL360014.30| Human DNA sequence from clone RP11-575I8 on chromosome 9, complete
             sequence
          Length = 87854

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   agaattttgatcagacatgga 343
             |||||||||||||||||||||
Sbjct: 68128 agaattttgatcagacatgga 68148
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>gb|AC012507.9| Homo sapiens BAC clone RP11-499P1 from 2, complete sequence
          Length = 165704

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 126    aggggaaagggagaaggagattgta 150
              |||||||||||||| ||||||||||
Sbjct: 113604 aggggaaagggagagggagattgta 113580
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>ref|NM_072418.1| Caenorhabditis elegans Serpentine Receptor, class H family member
           (srh-83) (srh-83) mRNA, complete cds
          Length = 1059

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  atacagtatcctccaaaaatg 73
           |||||||||||||||||||||
Sbjct: 149 atacagtatcctccaaaaatg 129
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>gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete sequence
          Length = 41087

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  atacagtatcctccaaaaatg 73
           |||||||||||||||||||||
Sbjct: 164 atacagtatcctccaaaaatg 144
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>gb|AF022972.1| Caenorhabditis elegans cosmid F10D2, complete sequence
          Length = 32940

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    atacagtatcctccaaaaatg 73
             |||||||||||||||||||||
Sbjct: 32604 atacagtatcctccaaaaatg 32584
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 287     tggaccaaaaacgaaagagcagcga 311
               ||||||||||| |||||||||||||
Sbjct: 4192376 tggaccaaaaatgaaagagcagcga 4192352
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>gb|AC131232.12| Mus musculus chromosome 8, clone RP24-376E20, complete sequence
          Length = 158672

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   agattgtagaactgtttaaaa 163
             |||||||||||||||||||||
Sbjct: 11152 agattgtagaactgtttaaaa 11172
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>ref|XM_639911.1| Dictyostelium discoideum hypothetical protein (DDB0168226),
          partial mRNA
          Length = 270

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 atgatgaatttgatagtgat 54
          ||||||||||||||||||||
Sbjct: 88 atgatgaatttgatagtgat 69
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>ref|XM_870442.1| PREDICTED: Bos taurus similar to IQ motif containing with AAA domain
            (LOC618116), mRNA
          Length = 1530

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  gagaaggagattgtagaact 155
            ||||||||||||||||||||
Sbjct: 1230 gagaaggagattgtagaact 1211
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>gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4,
            complete sequence
          Length = 146570

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   atgatgaatttgatagtgat 54
            ||||||||||||||||||||
Sbjct: 3666 atgatgaatttgatagtgat 3685
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>gb|AC069008.6| Homo sapiens BAC clone RP11-815N20 from 7, complete sequence
          Length = 90252

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ggggaaagggagaaggagat 146
             ||||||||||||||||||||
Sbjct: 87558 ggggaaagggagaaggagat 87577
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>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence
          Length = 167218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aggggaaagggagaaggaga 145
             ||||||||||||||||||||
Sbjct: 84531 aggggaaagggagaaggaga 84512
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>emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16 on chromosome 1q32.1-32.3
             Contains a novel gene, the CAMK1G gene for
             calcium/calmodulin-dependent protein kinase IG  and the 3'
             end of the LAMB3 gene for laminin beta 3, complete
             sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   gagcaaggggaaaaggcagggagg 205
             |||||||||||||||| |||||||
Sbjct: 96847 gagcaaggggaaaagggagggagg 96870
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>gb|AC162873.4| Mus musculus chromosome 1, clone RP24-313G16, complete sequence
          Length = 141528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ccttcttaatttgctcagga 277
             ||||||||||||||||||||
Sbjct: 37462 ccttcttaatttgctcagga 37481
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>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacaatgatgaatttgatag 50
             ||||||||||||||||||||
Sbjct: 27291 aacaatgatgaatttgatag 27272
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>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 153733

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aacaatgatgaatttgatag 50
             ||||||||||||||||||||
Sbjct: 15209 aacaatgatgaatttgatag 15228
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>ref|NM_171830.1| Homo sapiens potassium large conductance calcium-activated channel,
           subfamily M beta member 3 (KCNMB3), transcript variant
           3, mRNA
          Length = 1835

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ggggaaagggagaaggagat 146
           ||||||||||||||||||||
Sbjct: 919 ggggaaagggagaaggagat 900
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>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   aagcagtgattctggaaacaagca 368
             ||||||||||||||||||| ||||
Sbjct: 91737 aagcagtgattctggaaaccagca 91760
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>gb|BC113851.1| Homo sapiens cDNA clone IMAGE:40024631, containing frame-shift
           errors
          Length = 1527

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ggggaaagggagaaggagat 146
           ||||||||||||||||||||
Sbjct: 692 ggggaaagggagaaggagat 673
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 128      gggaaagggagaaggagatt 147
                ||||||||||||||||||||
Sbjct: 29411703 gggaaagggagaaggagatt 29411684
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>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186278

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ggagaagcagtgattctgga 360
              ||||||||||||||||||||
Sbjct: 159433 ggagaagcagtgattctgga 159414
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>gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 127759

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  ggggaaagggagaaggagat 146
            ||||||||||||||||||||
Sbjct: 3207 ggggaaagggagaaggagat 3226
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>gb|AF204161.1|AF204161 Homo sapiens potassium large conductance calcium-activated channel
           beta 3c subunit gene, complete cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ggggaaagggagaaggagat 146
           ||||||||||||||||||||
Sbjct: 920 ggggaaagggagaaggagat 901
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>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete
             sequences
          Length = 201997

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aggggaaagggagaaggaga 145
             ||||||||||||||||||||
Sbjct: 72771 aggggaaagggagaaggaga 72790
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>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete
              sequence
          Length = 197404

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    cagctccaggggaaagggagaagg 142
              ||||||||||||| ||||||||||
Sbjct: 167108 cagctccaggggagagggagaagg 167085
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>gb|AF139471.1|AF139471 Homo sapiens putative calcium-activated potassium channel
           regulatory subunit (KCNMB3) mRNA, complete cds
          Length = 1022

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ggggaaagggagaaggagat 146
           ||||||||||||||||||||
Sbjct: 106 ggggaaagggagaaggagat 87
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gggaaagggagaaggagatt 147
             ||||||||||||||||||||
Sbjct: 74625 gggaaagggagaaggagatt 74606
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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
             sequence
          Length = 302665

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacaatgatgaatttgatag 50
             ||||||||||||||||||||
Sbjct: 44412 aacaatgatgaatttgatag 44393
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>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aggggaaagggagaaggaga 145
             ||||||||||||||||||||
Sbjct: 72526 aggggaaagggagaaggaga 72545
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>gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, complete sequence
          Length = 174136

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  aggggaaagggagaaggaga 145
            ||||||||||||||||||||
Sbjct: 4522 aggggaaagggagaaggaga 4541
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>gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, complete sequence
          Length = 149611

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    ccttcttaatttgctcagga 277
              ||||||||||||||||||||
Sbjct: 129128 ccttcttaatttgctcagga 129147
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>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171
             region, complete sequence
          Length = 124516

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aggggaaagggagaaggaga 145
             ||||||||||||||||||||
Sbjct: 12663 aggggaaagggagaaggaga 12682
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>dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2042A8, MX1-D21S171
             region, complete sequence
          Length = 81896

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aggggaaagggagaaggaga 145
             ||||||||||||||||||||
Sbjct: 56867 aggggaaagggagaaggaga 56886
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>emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2062F14 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 130569

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 190   ggaaaaggcagggaggacaagaag 213
             ||||||||||||||||| ||||||
Sbjct: 75092 ggaaaaggcagggaggaaaagaag 75069


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,625,076
Number of Sequences: 3902068
Number of extensions: 4625076
Number of successful extensions: 90541
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90300
Number of HSP's gapped (non-prelim): 240
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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