ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15m21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT024115.1| Zea mays clone EL01N0513A07 mRNA sequence 720 0.0
2ref|XM_463952.1| Oryza sativa (japonica cultivar-group), mRNA 712 0.0
3dbj|AK101889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 712 0.0
4gb|AY106414.1| Zea mays PCO109372 mRNA sequence 712 0.0
5gb|AY108671.1| Zea mays PCO109373 mRNA sequence 690 0.0
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
7dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
8dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
9ref|NM_117417.2| Arabidopsis thaliana hydro-lyase/ lyase AT4G134... 125 2e-25
10gb|DQ448855.1| Theobroma cacao putative 3-isopropylmalate dehydr... 125 2e-25
11gb|AY117151.1| Arabidopsis thaliana unknown protein (At4g13430) ... 125 2e-25
12gb|AY045842.1| Arabidopsis thaliana unknown protein (At4g13430) ... 125 2e-25
13gb|AC136679.19| Medicago truncatula clone mth2-22c4, complete se... 96 2e-16
14emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, ... 96 2e-16
15emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC... 96 2e-16
16gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete se... 84 6e-13
17gb|AY191286.1| Aster yellows phytoplasma clone A244 genomic sequ... 54 5e-04
18gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, com... 42 2.0
19gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, com... 42 2.0
20dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24gb|L35061.1|B4PORFSX Bacteriophage phi-41 orfs L1-12, complete c... 42 2.0
25ref|XM_514690.1| PREDICTED: Pan troglodytes LOC458295 (LOC458295... 40 7.8
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.8
27gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 40 7.8
28gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic ... 40 7.8
29gb|AF041836.1| Buchnera aphidicola (Schizaphis graminum) plasmid... 40 7.8
30emb|AL034421.7|HS1137F22 Human DNA sequence from clone RP5-1137F... 40 7.8
31ref|XM_781719.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.8
32gb|AF208159.1| Homo sapiens electroneutral potassium-chloride co... 40 7.8
33gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, compl... 40 7.8
34ref|NM_020708.3| Homo sapiens solute carrier family 12, (potassi... 40 7.8
35gb|AC098657.2| Homo sapiens chromosome 1 clone RP11-339A11, comp... 40 7.8
36gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 7.8
37gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 40 7.8
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
40gb|AC068339.6| Homo sapiens chromosome 11, clone RP11-328E22, co... 40 7.8
41gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, comple... 40 7.8
42dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
43dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
44dbj|AK098371.1| Homo sapiens cDNA FLJ25505 fis, clone CBR04623, ... 40 7.8
45gb|AF076453.1|HSMTGR1E05 Homo sapiens MTG8-like protein (MTGR1) ... 40 7.8
46gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 40 7.8
47emb|BX000527.12| Mouse DNA sequence from clone RP23-67M6 on chro... 40 7.8
48dbj|AB033002.1| Homo sapiens mRNA for KIAA1176 protein, partial cds 40 7.8

>gb|BT024115.1| Zea mays clone EL01N0513A07 mRNA sequence
          Length = 1781

 Score =  720 bits (363), Expect = 0.0
 Identities = 519/571 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60
            |||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct: 844  gagagatgccgccttatttacttgcgaaggatctgattttgcaaattattggagagattt 903

                                                                        
Query: 61   ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120
            | ||||||||||| || |||| ||| ||||||||||||||||||||  ||||||||||||
Sbjct: 904  cagtatctggtgcgacctacaaatcaatggagtttgttggatcaactgtagaaagtctaa 963

                                                                        
Query: 121  ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180
            | |||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 964  ccatggaagagcgtatgacactatgcaacatggttattgaagctggtggaaagaacggtg 1023

                                                                        
Query: 181  ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240
            |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 1024 ttgtgcctgctgatgaaactacatttaaataccttgagggtaagacatcagtcgattatg 1083

                                                                        
Query: 241  agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300
            | |||||||| ||||||||||| ||||||||||  || |||||||||||||||||||| |
Sbjct: 1084 aacctgtctacagtgatgctcaagccagattttttagcgactaccggtttgatgtatcaa 1143

                                                                        
Query: 301  aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360
            || | |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||
Sbjct: 1144 aactggagccagtagttgccaagccacattcgcctgacaaccgtgctccagcaagagaat 1203

                                                                        
Query: 361  gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420
            |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1204 gcaaagatgtgaagatcgaccgagtctatattggttcttgcactggtggtaagaccgagg 1263

                                                                        
Query: 421  actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480
            | ||  ||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 1264 atttccttgctgctgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 1323

                                                                        
Query: 481  ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540
            |||| |||||||| || |||||||||||| ||||| | ||||||||||| ||||||||||
Sbjct: 1324 ttcttgtccctgccacacaaaaggtgtggttggacatatatagcctccctgtaccaggat 1383

                                           
Query: 541  ctggtggcaaaacatgttcccagatatttga 571
            ||||||||||||| || ||||||||||||||
Sbjct: 1384 ctggtggcaaaacttgctcccagatatttga 1414



to top

>ref|XM_463952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1802

 Score =  712 bits (359), Expect = 0.0
 Identities = 518/571 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60
            ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct: 796  gagaaatgccaccttatttacttgcaaaggatctgattttacaaattattggtgagattt 855

                                                                        
Query: 61   ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120
            |||||||||| || ||||||| ||| ||||||||||||||||||||  | ||||||||||
Sbjct: 856  ctgtatctggcgcaacatacaaatccatggagtttgttggatcaactgtggaaagtctaa 915

                                                                        
Query: 121  ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180
             ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 916  atatggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtg 975

                                                                        
Query: 181  ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240
            |||||||||| ||| ||||||||||||| || |||||||| |||||||| || ||||| |
Sbjct: 976  ttgtgcctgccgatcaaactacatttaactatcttgagggcaagacatcagttgaatacg 1035

                                                                        
Query: 241  agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300
            ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |
Sbjct: 1036 agcctgtctatagtgatgctcaggccagatttgttagtgactaccggtttgatgtatcca 1095

                                                                        
Query: 301  aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360
            |||| ||||||||  |||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1096 aattggagccagttattgccaagccacattcacctgacaaccgtgctctagcaagagagt 1155

                                                                        
Query: 361  gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420
            |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct: 1156 gcaaagatgtcaagattgaccgggtctatatcggttcttgtactggaggtaaaactgagg 1215

                                                                        
Query: 421  actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480
            ||||  |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1216 acttctttgctgctgcgaaggtgttcttagcttcggggaagaaggttaaagttcccactt 1275

                                                                        
Query: 481  ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540
            ||||||| || ||||| |||||||||||||||||| | |||||| |||| ||||||||| 
Sbjct: 1276 ttctcgttccggcgacacaaaaggtgtggatggacatttatagcatccctgtaccaggag 1335

                                           
Query: 541  ctggtggcaaaacatgttcccagatatttga 571
            | ||||||||||| || || |||||||||||
Sbjct: 1336 ccggtggcaaaacttgctcacagatatttga 1366



to top

>dbj|AK101889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M16, full
            insert sequence
          Length = 1802

 Score =  712 bits (359), Expect = 0.0
 Identities = 518/571 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60
            ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct: 796  gagaaatgccaccttatttacttgcaaaggatctgattttacaaattattggtgagattt 855

                                                                        
Query: 61   ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120
            |||||||||| || ||||||| ||| ||||||||||||||||||||  | ||||||||||
Sbjct: 856  ctgtatctggcgcaacatacaaatccatggagtttgttggatcaactgtggaaagtctaa 915

                                                                        
Query: 121  ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180
             ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 916  atatggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtg 975

                                                                        
Query: 181  ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240
            |||||||||| ||| ||||||||||||| || |||||||| |||||||| || ||||| |
Sbjct: 976  ttgtgcctgccgatcaaactacatttaactatcttgagggcaagacatcagttgaatacg 1035

                                                                        
Query: 241  agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300
            ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |
Sbjct: 1036 agcctgtctatagtgatgctcaggccagatttgttagtgactaccggtttgatgtatcca 1095

                                                                        
Query: 301  aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360
            |||| ||||||||  |||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1096 aattggagccagttattgccaagccacattcacctgacaaccgtgctctagcaagagagt 1155

                                                                        
Query: 361  gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420
            |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct: 1156 gcaaagatgtcaagattgaccgggtctatatcggttcttgtactggaggtaaaactgagg 1215

                                                                        
Query: 421  actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480
            ||||  |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1216 acttctttgctgctgcgaaggtgttcttagcttcggggaagaaggttaaagttcccactt 1275

                                                                        
Query: 481  ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540
            ||||||| || ||||| |||||||||||||||||| | |||||| |||| ||||||||| 
Sbjct: 1276 ttctcgttccggcgacacaaaaggtgtggatggacatttatagcatccctgtaccaggag 1335

                                           
Query: 541  ctggtggcaaaacatgttcccagatatttga 571
            | ||||||||||| || || |||||||||||
Sbjct: 1336 ccggtggcaaaacttgctcacagatatttga 1366



to top

>gb|AY106414.1| Zea mays PCO109372 mRNA sequence
          Length = 1863

 Score =  712 bits (359), Expect = 0.0
 Identities = 518/571 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60
            |||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct: 793  gagagatgccgccttatttacttgcgaaggatctgattttgcaaattattggagagattt 852

                                                                        
Query: 61   ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120
            | ||||||||||| || |||| ||| ||||||||||||||||||||  ||||||||||||
Sbjct: 853  cagtatctggtgcgacctacaaatcaatggagtttgttggatcaactgtagaaagtctaa 912

                                                                        
Query: 121  ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180
            | |||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 913  ccatggaagagcgtatgacactatgcaacatggttattgaagctggtggaaagaacggtg 972

                                                                        
Query: 181  ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240
            |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 973  ttgtgcctgctgatgaaactacatttaaataccttgagggtaagacatcagtcgattatg 1032

                                                                        
Query: 241  agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300
            | |||||||| ||||||||||| ||||||||||  || |||||||||||||||||||| |
Sbjct: 1033 aacctgtctacagtgatgctcaagccagattttttagcgactaccggtttgatgtatcaa 1092

                                                                        
Query: 301  aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360
            || | |||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||
Sbjct: 1093 aactggagccagtagttgccaagccacattcgcctgacaaccgtgctccagcacgagaat 1152

                                                                        
Query: 361  gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420
            |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1153 gcaaagatgtgaagatcgaccgagtctatattggttcttgcactggtggtaagaccgagg 1212

                                                                        
Query: 421  actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480
            | ||  ||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 1213 atttccttgctgctgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 1272

                                                                        
Query: 481  ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540
            |||| |||||||| || |||||||||||| ||||| | ||||||||||| ||||||||||
Sbjct: 1273 ttcttgtccctgccacacaaaaggtgtggttggacatatatagcctccctgtaccaggat 1332

                                           
Query: 541  ctggtggcaaaacatgttcccagatatttga 571
            ||||||||||||| || ||||||||||||||
Sbjct: 1333 ctggtggcaaaacttgctcccagatatttga 1363



to top

>gb|AY108671.1| Zea mays PCO109373 mRNA sequence
          Length = 1642

 Score =  690 bits (348), Expect = 0.0
 Identities = 513/568 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60
            |||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct: 485  gagaaatgccgccttatttacttgcgaaggatctgattttgcaaattattggtgagattt 544

                                                                        
Query: 61   ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120
            | ||||||||||| || |||| ||||||||||||||||||||||||  ||||||||||||
Sbjct: 545  cagtatctggtgcaacctacaaatcgatggagtttgttggatcaactgtagaaagtctaa 604

                                                                        
Query: 121  ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180
            | ||||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 605  ccatggaagaacgtatgacactatgcaacatggttgttgaagctggtggaaagaacggtg 664

                                                                        
Query: 181  ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240
            | |||||||||||||||||||||||||| ||||||||||||| |||||| || || ||| 
Sbjct: 665  tcgtgcctgctgatgaaactacatttaaataccttgagggtaggacatcagttgattatc 724

                                                                        
Query: 241  agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300
            | |||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||| |
Sbjct: 725  aacctgtctacagtgatgctgaggccagattttttagtgactaccggtttgatgtatcga 784

                                                                        
Query: 301  aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360
            || | |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 785  aactggagccagtagttgccaagccacattcgcctgacaaccgtgccctagcaagagaat 844

                                                                        
Query: 361  gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420
            |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 845  gcaaagatgtcaagatcgaccgagtctatattggttcctgcactggtggcaagactgagg 904

                                                                        
Query: 421  actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480
            ||||  ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 905  acttccttgctgccgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 964

                                                                        
Query: 481  ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540
            | || |||||||| || |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 965  tccttgtccctgccacacaaaaggtgtggatggacgtatatagccttcctgtaccaggat 1024

                                        
Query: 541  ctggtggcaaaacatgttcccagatatt 568
            |||| |||||||| ||  ||||||||||
Sbjct: 1025 ctggcggcaaaacttgcgcccagatatt 1052



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  188 bits (95), Expect = 1e-44
 Identities = 125/135 (92%)
 Strand = Plus / Minus

                                                                           
Query: 322     agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
               |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1306754 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 1306695

                                                                           
Query: 382     gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441
               | |||||||| |||||||| ||||| ||||| |||||||||||  |||||||||| ||||
Sbjct: 1306694 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 1306635

                              
Query: 442     tgttcttagcttcgg 456
               |||||||||||||||
Sbjct: 1306634 tgttcttagcttcgg 1306620



 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                           
Query: 123     atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182
               |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1307917 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 1307858

                                                    
Query: 183     gtgcctgctgatgaaactacatttaagtaccttgagg 219
               |||||||| ||| ||||||||||||| || |||||||
Sbjct: 1307857 gtgcctgccgatcaaactacatttaactatcttgagg 1307821



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                           
Query: 1       gagaaatgccaccttatttacttgctaaggatctgattttacaa 44
               ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1308212 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 1308169



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                           
Query: 45      attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104
               |||||||| ||||| ||||||||||| || ||||||| ||| ||||||||||||||||||
Sbjct: 1308078 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 1308019

                               
Query: 105     acaatagaaagtctaa 120
               ||  | ||||||||||
Sbjct: 1308018 actgtggaaagtctaa 1308003



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                   
Query: 217     agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268
               |||| |||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 1307651 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 1307600



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                           
Query: 502     aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
               |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || |
Sbjct: 1305837 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 1305778

                         
Query: 562     agatatttga 571
               ||||||||||
Sbjct: 1305777 agatatttga 1305768



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 459     aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506
               ||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 1305966 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 1305919



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 276     agtgactaccggtttgatgtatctaaattagagccagt 313
               ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1306889 agtgactaccggtttgatgtatccaaattggagccagt 1306852



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 33195235 taaattagagccagtagttg 33195254



to top

>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0575F10
          Length = 150462

 Score =  188 bits (95), Expect = 1e-44
 Identities = 125/135 (92%)
 Strand = Plus / Minus

                                                                          
Query: 322    agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
              |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 137845 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 137786

                                                                          
Query: 382    gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441
              | |||||||| |||||||| ||||| ||||| |||||||||||  |||||||||| ||||
Sbjct: 137785 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 137726

                             
Query: 442    tgttcttagcttcgg 456
              |||||||||||||||
Sbjct: 137725 tgttcttagcttcgg 137711



 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                          
Query: 123    atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182
              |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 139008 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 138949

                                                   
Query: 183    gtgcctgctgatgaaactacatttaagtaccttgagg 219
              |||||||| ||| ||||||||||||| || |||||||
Sbjct: 138948 gtgcctgccgatcaaactacatttaactatcttgagg 138912



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                          
Query: 1      gagaaatgccaccttatttacttgctaaggatctgattttacaa 44
              ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 139303 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 139260



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                          
Query: 45     attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104
              |||||||| ||||| ||||||||||| || ||||||| ||| ||||||||||||||||||
Sbjct: 139169 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 139110

                              
Query: 105    acaatagaaagtctaa 120
              ||  | ||||||||||
Sbjct: 139109 actgtggaaagtctaa 139094



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                  
Query: 217    agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268
              |||| |||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 138742 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 138691



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 502    aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
              |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || |
Sbjct: 136928 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 136869

                        
Query: 562    agatatttga 571
              ||||||||||
Sbjct: 136868 agatatttga 136859



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 459    aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506
              ||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 137057 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 137010



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 276    agtgactaccggtttgatgtatctaaattagagccagt 313
              ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 137980 agtgactaccggtttgatgtatccaaattggagccagt 137943



to top

>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0018H03, complete sequence
          Length = 94450

 Score =  188 bits (95), Expect = 1e-44
 Identities = 125/135 (92%)
 Strand = Plus / Minus

                                                                         
Query: 322   agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
             |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 80783 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 80724

                                                                         
Query: 382   gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441
             | |||||||| |||||||| ||||| ||||| |||||||||||  |||||||||| ||||
Sbjct: 80723 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 80664

                            
Query: 442   tgttcttagcttcgg 456
             |||||||||||||||
Sbjct: 80663 tgttcttagcttcgg 80649



 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                         
Query: 123   atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182
             |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 81946 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 81887

                                                  
Query: 183   gtgcctgctgatgaaactacatttaagtaccttgagg 219
             |||||||| ||| ||||||||||||| || |||||||
Sbjct: 81886 gtgcctgccgatcaaactacatttaactatcttgagg 81850



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                         
Query: 1     gagaaatgccaccttatttacttgctaaggatctgattttacaa 44
             ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 82241 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 82198



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 45    attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104
             |||||||| ||||| ||||||||||| || ||||||| ||| ||||||||||||||||||
Sbjct: 82107 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 82048

                             
Query: 105   acaatagaaagtctaa 120
             ||  | ||||||||||
Sbjct: 82047 actgtggaaagtctaa 82032



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                 
Query: 217   agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268
             |||| |||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 81680 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 81629



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 502   aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
             |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || |
Sbjct: 79866 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 79807

                       
Query: 562   agatatttga 571
             ||||||||||
Sbjct: 79806 agatatttga 79797



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 459   aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506
             ||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 79995 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 79948



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 276   agtgactaccggtttgatgtatctaaattagagccagt 313
             ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 80918 agtgactaccggtttgatgtatccaaattggagccagt 80881



to top

>ref|NM_117417.2| Arabidopsis thaliana hydro-lyase/ lyase AT4G13430 mRNA, complete
           cds
          Length = 1871

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86
           |||||||||||||||||||||||||| || ||||||||  ||||||| || ||||   ||
Sbjct: 834 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 893

                                                                       
Query: 87  atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146
           ||||||||   |||  |||| || |||||||| | |||||||||| |||||||| |||||
Sbjct: 894 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 953

                                              
Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181
           ||||||||| | |||||||| ||||||||||||||
Sbjct: 954 aacatggttgtggaagctgggggaaagaatggtgt 988



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                        
Query: 321  aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380
            ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || ||||||
Sbjct: 1128 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1187

                                                                 
Query: 381  cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433
             |||| || || |||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 1188 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1240



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                        
Query: 462  aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521
            ||||| || ||||| ||||| || ||||| || || || |||||||||||||| ||||||
Sbjct: 1269 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1328

                                                                
Query: 522  agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573
               ||||| ||||| ||| | ||||| || |||||| | ||||| |||||||
Sbjct: 1329 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1380



to top

>gb|DQ448855.1| Theobroma cacao putative 3-isopropylmalate dehydratase large
           subunit mRNA, partial cds
          Length = 361

 Score =  125 bits (63), Expect = 2e-25
 Identities = 138/163 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  tatttacttgctaaggatctgattttacaaattattggcgagatatctgtatctggtgct 74
           ||||| ||||| |||||| |||||||||| || ||||| || ||||||||| ||||||| 
Sbjct: 199 tatttgcttgcaaaggatttgattttacagatcattggtgaaatatctgtagctggtgca 258

                                                                       
Query: 75  acatacagatcgatggagtttgttggatcaacaatagaaagtctaactatggaagaacga 134
           ||||||| ||| ||||||||||||||| ||||  | |||||| |||  ||||||||||| 
Sbjct: 259 acatacaaatccatggagtttgttggaacaactgttgaaagtttaaacatggaagaacgt 318

                                                      
Query: 135 atgacactgtgcaacatggttattgaagctggtggaaagaatg 177
           |||||  | ||||| |||||| |||||||||| ||||||||||
Sbjct: 319 atgactttatgcaatatggttgttgaagctgggggaaagaatg 361



to top

>gb|AY117151.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds
          Length = 1561

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86
           |||||||||||||||||||||||||| || ||||||||  ||||||| || ||||   ||
Sbjct: 754 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 813

                                                                       
Query: 87  atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146
           ||||||||   |||  |||| || |||||||| | |||||||||| |||||||| |||||
Sbjct: 814 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 873

                                              
Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181
           ||||||||| | |||||||| ||||||||||||||
Sbjct: 874 aacatggttgtggaagctgggggaaagaatggtgt 908



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                        
Query: 321  aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380
            ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || ||||||
Sbjct: 1048 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1107

                                                                 
Query: 381  cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433
             |||| || || |||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 1108 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1160



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                        
Query: 462  aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521
            ||||| || ||||| ||||| || ||||| || || || |||||||||||||| ||||||
Sbjct: 1189 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1248

                                                                
Query: 522  agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573
               ||||| ||||| ||| | ||||| || |||||| | ||||| |||||||
Sbjct: 1249 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1300



to top

>gb|AY045842.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds
          Length = 1808

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86
           |||||||||||||||||||||||||| || ||||||||  ||||||| || ||||   ||
Sbjct: 823 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 882

                                                                       
Query: 87  atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146
           ||||||||   |||  |||| || |||||||| | |||||||||| |||||||| |||||
Sbjct: 883 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 942

                                              
Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181
           ||||||||| | |||||||| ||||||||||||||
Sbjct: 943 aacatggttgtggaagctgggggaaagaatggtgt 977



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                        
Query: 321  aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380
            ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || ||||||
Sbjct: 1117 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1176

                                                                 
Query: 381  cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433
             |||| || || |||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 1177 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1229



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                        
Query: 462  aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521
            ||||| || ||||| ||||| || ||||| || || || |||||||||||||| ||||||
Sbjct: 1258 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1317

                                                                
Query: 522  agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573
               ||||| ||||| ||| | ||||| || |||||| | ||||| |||||||
Sbjct: 1318 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1369



to top

>gb|AC136679.19| Medicago truncatula clone mth2-22c4, complete sequence
          Length = 101649

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                         
Query: 123   atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182
             |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||
Sbjct: 79916 atggaagaacgaatgacattgtgcaacatggttgttgaagctggaggaaagaatggtgtt 79975



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 142   tgtgcaacatggttattgaagctggtggaaagaatggtgtt 182
             |||||||||||||| ||||| |||| |||||||| ||||||
Sbjct: 92362 tgtgcaacatggttgttgaatctggaggaaagaacggtgtt 92402



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 502   aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
             |||| ||||||||||||||||| || || || || ||||| ||||| || || || || |
Sbjct: 84507 aggtttggatggacgtgtatagtcttcctgtccctggatccggtggtaagacttgctcgc 84566

                         
Query: 562   agatatttgaag 573
             ||||||||||||
Sbjct: 84567 agatatttgaag 84578



to top

>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36
          Length = 199634

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                         
Query: 322   agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
             |||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| 
Sbjct: 91965 agcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgaca 91906

                                                                 
Query: 382   gagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433
             |||| || || |||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 91905 gagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 91854



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 123   atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgt 181
             ||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||
Sbjct: 92622 atggaagaaagaatgacattgtgcaacatggttgtggaagctgggggaaagaatggtgt 92564



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 502   aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
             ||||||||||||| ||||||   ||||| ||||| ||| | ||||| || |||||| | |
Sbjct: 91335 aggtgtggatggatgtgtatgctctcccggtacctggagcaggtggaaagacatgtgcgc 91276

                         
Query: 562   agatatttgaag 573
             |||| |||||||
Sbjct: 91275 agatctttgaag 91264



to top

>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence
             (ESSA project)
          Length = 95432

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                         
Query: 322   agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
             |||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| 
Sbjct: 75986 agcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgaca 75927

                                                                 
Query: 382   gagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433
             |||| || || |||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 75926 gagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 75875



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 123   atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgt 181
             ||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||
Sbjct: 76643 atggaagaaagaatgacattgtgcaacatggttgtggaagctgggggaaagaatggtgt 76585



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 502   aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561
             ||||||||||||| ||||||   ||||| ||||| ||| | ||||| || |||||| | |
Sbjct: 75356 aggtgtggatggatgtgtatgctctcccggtacctggagcaggtggaaagacatgtgcgc 75297

                         
Query: 562   agatatttgaag 573
             |||| |||||||
Sbjct: 75296 agatctttgaag 75285



to top

>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
          Length = 115904

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                         
Query: 322   agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381
             |||||||||| ||||| ||||||||| | ||||||||||||||  |||| || |||||||
Sbjct: 53545 agccacattctcctgataaccgtgctttggcaagagaatgcaacaatgttaaaattgacc 53604

                                               
Query: 382   gagtctatattggttcttgcactggtggtaagac 415
             |||| || ||||| || ||||||||||| |||||
Sbjct: 53605 gagtatacattggatcatgcactggtggaaagac 53638



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 48    attggcgagatatctgtatctggtgctacatacagatcgatggagtttgttgg 100
             |||||||| |||||| | |||||||| ||||||| | ||||||||||||||||
Sbjct: 52249 attggcgaaatatctatgtctggtgcaacatacaaaacgatggagtttgttgg 52301



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 468   aaggttcccacttttctcgtccctgcgacgcaaaaggtgtg 508
             |||||||| |||||||| || ||||| || |||||||||||
Sbjct: 53852 aaggttcctacttttcttgttcctgctacccaaaaggtgtg 53892



to top

>gb|AY191286.1| Aster yellows phytoplasma clone A244 genomic sequence
          Length = 1886

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 122  tatggaagaacgaatgacactgtgcaacatg 152
            ||||||||||||||||||| |||||||||||
Sbjct: 1507 tatggaagaacgaatgacagtgtgcaacatg 1537



to top

>gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, complete sequence
          Length = 178352

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 106    caatagaaagtctaactatgg 126
              |||||||||||||||||||||
Sbjct: 161972 caatagaaagtctaactatgg 161952



to top

>gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, complete sequence
          Length = 170076

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   caatagaaagtctaactatgg 126
             |||||||||||||||||||||
Sbjct: 97356 caatagaaagtctaactatgg 97376



to top

>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 461   gaaggttaaggttcccacttt 481
             |||||||||||||||||||||
Sbjct: 15424 gaaggttaaggttcccacttt 15404



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 461      gaaggttaaggttcccacttt 481
                |||||||||||||||||||||
Sbjct: 40216472 gaaggttaaggttcccacttt 40216452



to top

>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1793G04
          Length = 156714

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 461   gaaggttaaggttcccacttt 481
             |||||||||||||||||||||
Sbjct: 82250 gaaggttaaggttcccacttt 82230



to top

>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1425D05, complete sequence
          Length = 66450

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 461  gaaggttaaggttcccacttt 481
            |||||||||||||||||||||
Sbjct: 7822 gaaggttaaggttcccacttt 7802



to top

>gb|L35061.1|B4PORFSX Bacteriophage phi-41 orfs L1-12, complete cds's, orf 13, 5' end
          Length = 10170

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 174  aatggtgttgtgcctgctgat 194
            |||||||||||||||||||||
Sbjct: 6320 aatggtgttgtgcctgctgat 6300



to top

>ref|XM_514690.1| PREDICTED: Pan troglodytes LOC458295 (LOC458295), mRNA
          Length = 3639

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gaatggtgttgtgcctgctg 192
           ||||||||||||||||||||
Sbjct: 771 gaatggtgttgtgcctgctg 790



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 35887749 taaattagagccagtagttg 35887768



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 29920085 taaattagagccagtagttg 29920104



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 29143344 taaattagagccagtagttg 29143363



to top

>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 90521 taaattagagccagtagttg 90502



to top

>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete
             sequence
          Length = 91084

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 28032 taaattagagccagtagttg 28013



to top

>gb|AF041836.1| Buchnera aphidicola (Schizaphis graminum) plasmid pLeu-Sg, complete
            plasmid sequence
          Length = 7967

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 122  tatggaagaacgaatgacactgtgcaacatgg 153
            ||||||||||||||||||| | || |||||||
Sbjct: 6567 tatggaagaacgaatgacaatttgtaacatgg 6598



to top

>emb|AL034421.7|HS1137F22 Human DNA sequence from clone RP5-1137F22 on chromosome 20q11.2-12
             Contains the 5' end of the CBFA2T2 gene for runt domain
             core-binding factor alpha subunit 2 and a CpG island,
             complete sequence
          Length = 92807

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   gttcttgcactggtggtaag 413
             ||||||||||||||||||||
Sbjct: 80465 gttcttgcactggtggtaag 80484



to top

>ref|XM_781719.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrillin
           (3I729) (LOC581732), mRNA
          Length = 3226

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  cgagatatctgtatctggtgctac 76
           |||||| |||||||||||||||||
Sbjct: 105 cgagatttctgtatctggtgctac 82



to top

>gb|AF208159.1| Homo sapiens electroneutral potassium-chloride cotransporter KCC2
           (KCC2) mRNA, complete cds
          Length = 5907

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gaatggtgttgtgcctgctg 192
           ||||||||||||||||||||
Sbjct: 465 gaatggtgttgtgcctgctg 484



to top

>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence
          Length = 191499

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   gcaaagatgtcaagattgac 380
             ||||||||||||||||||||
Sbjct: 40758 gcaaagatgtcaagattgac 40739



to top

>ref|NM_020708.3| Homo sapiens solute carrier family 12, (potassium-chloride
           transporter) member 5 (SLC12A5), mRNA
          Length = 6059

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gaatggtgttgtgcctgctg 192
           ||||||||||||||||||||
Sbjct: 611 gaatggtgttgtgcctgctg 630



to top

>gb|AC098657.2| Homo sapiens chromosome 1 clone RP11-339A11, complete sequence
          Length = 158859

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   gcaaagatgtcaagattgac 380
             ||||||||||||||||||||
Sbjct: 82036 gcaaagatgtcaagattgac 82017



to top

>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 73376 taaattagagccagtagttg 73357



to top

>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 86026 taaattagagccagtagttg 86045



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 27324403 taaattagagccagtagttg 27324422



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 35977879 taaattagagccagtagttg 35977898



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 30011507 taaattagagccagtagttg 30011526



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      taaattagagccagtagttg 318
                ||||||||||||||||||||
Sbjct: 29234766 taaattagagccagtagttg 29234785



to top

>gb|AC068339.6| Homo sapiens chromosome 11, clone RP11-328E22, complete sequence
          Length = 155491

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    caggccagattttacagtga 280
              ||||||||||||||||||||
Sbjct: 129675 caggccagattttacagtga 129694



to top

>gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, complete sequence
          Length = 176383

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   atttaagtaccttgagggta 222
             ||||||||||||||||||||
Sbjct: 96699 atttaagtaccttgagggta 96680



to top

>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 67230 taaattagagccagtagttg 67249



to top

>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_D08
          Length = 163702

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   taaattagagccagtagttg 318
             ||||||||||||||||||||
Sbjct: 24544 taaattagagccagtagttg 24563



to top

>dbj|AK098371.1| Homo sapiens cDNA FLJ25505 fis, clone CBR04623, highly similar to
           K-Cl cotransport protein 2, furosemide-sensitive
          Length = 1549

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gaatggtgttgtgcctgctg 192
           ||||||||||||||||||||
Sbjct: 614 gaatggtgttgtgcctgctg 633



to top

>gb|AF076453.1|HSMTGR1E05 Homo sapiens MTG8-like protein (MTGR1) exon 5, complete sequence
          Length = 738

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 394 gttcttgcactggtggtaag 413
           ||||||||||||||||||||
Sbjct: 329 gttcttgcactggtggtaag 348



to top

>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   tgctgatgaaactacatttaagta 211
             |||| |||||||||||||||||||
Sbjct: 83188 tgctaatgaaactacatttaagta 83165



to top

>emb|BX000527.12| Mouse DNA sequence from clone RP23-67M6 on chromosome X, complete
            sequence
          Length = 5534

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 92   gtttgttggatcaacaatagaaagtctaacta 123
            ||||||| | ||||||||||||| ||||||||
Sbjct: 2197 gtttgttagttcaacaatagaaactctaacta 2228



to top

>dbj|AB033002.1| Homo sapiens mRNA for KIAA1176 protein, partial cds
          Length = 3305

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gaatggtgttgtgcctgctg 192
           ||||||||||||||||||||
Sbjct: 443 gaatggtgttgtgcctgctg 462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,476,759
Number of Sequences: 3902068
Number of extensions: 4476759
Number of successful extensions: 77503
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77220
Number of HSP's gapped (non-prelim): 280
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top