| Clone Name | bags15m21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT024115.1| Zea mays clone EL01N0513A07 mRNA sequence Length = 1781 Score = 720 bits (363), Expect = 0.0 Identities = 519/571 (90%) Strand = Plus / Plus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60 |||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 844 gagagatgccgccttatttacttgcgaaggatctgattttgcaaattattggagagattt 903 Query: 61 ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120 | ||||||||||| || |||| ||| |||||||||||||||||||| |||||||||||| Sbjct: 904 cagtatctggtgcgacctacaaatcaatggagtttgttggatcaactgtagaaagtctaa 963 Query: 121 ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180 | |||||||| || |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 964 ccatggaagagcgtatgacactatgcaacatggttattgaagctggtggaaagaacggtg 1023 Query: 181 ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1024 ttgtgcctgctgatgaaactacatttaaataccttgagggtaagacatcagtcgattatg 1083 Query: 241 agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300 | |||||||| ||||||||||| |||||||||| || |||||||||||||||||||| | Sbjct: 1084 aacctgtctacagtgatgctcaagccagattttttagcgactaccggtttgatgtatcaa 1143 Query: 301 aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360 || | |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1144 aactggagccagtagttgccaagccacattcgcctgacaaccgtgctccagcaagagaat 1203 Query: 361 gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1204 gcaaagatgtgaagatcgaccgagtctatattggttcttgcactggtggtaagaccgagg 1263 Query: 421 actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480 | || ||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 1264 atttccttgctgctgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 1323 Query: 481 ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540 |||| |||||||| || |||||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 1324 ttcttgtccctgccacacaaaaggtgtggttggacatatatagcctccctgtaccaggat 1383 Query: 541 ctggtggcaaaacatgttcccagatatttga 571 ||||||||||||| || |||||||||||||| Sbjct: 1384 ctggtggcaaaacttgctcccagatatttga 1414
>ref|XM_463952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1802 Score = 712 bits (359), Expect = 0.0 Identities = 518/571 (90%) Strand = Plus / Plus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 796 gagaaatgccaccttatttacttgcaaaggatctgattttacaaattattggtgagattt 855 Query: 61 ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120 |||||||||| || ||||||| ||| |||||||||||||||||||| | |||||||||| Sbjct: 856 ctgtatctggcgcaacatacaaatccatggagtttgttggatcaactgtggaaagtctaa 915 Query: 121 ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 916 atatggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtg 975 Query: 181 ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240 |||||||||| ||| ||||||||||||| || |||||||| |||||||| || ||||| | Sbjct: 976 ttgtgcctgccgatcaaactacatttaactatcttgagggcaagacatcagttgaatacg 1035 Query: 241 agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1036 agcctgtctatagtgatgctcaggccagatttgttagtgactaccggtttgatgtatcca 1095 Query: 301 aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360 |||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||| | Sbjct: 1096 aattggagccagttattgccaagccacattcacctgacaaccgtgctctagcaagagagt 1155 Query: 361 gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||||| Sbjct: 1156 gcaaagatgtcaagattgaccgggtctatatcggttcttgtactggaggtaaaactgagg 1215 Query: 421 actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480 |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1216 acttctttgctgctgcgaaggtgttcttagcttcggggaagaaggttaaagttcccactt 1275 Query: 481 ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540 ||||||| || ||||| |||||||||||||||||| | |||||| |||| ||||||||| Sbjct: 1276 ttctcgttccggcgacacaaaaggtgtggatggacatttatagcatccctgtaccaggag 1335 Query: 541 ctggtggcaaaacatgttcccagatatttga 571 | ||||||||||| || || ||||||||||| Sbjct: 1336 ccggtggcaaaacttgctcacagatatttga 1366
>dbj|AK101889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M16, full insert sequence Length = 1802 Score = 712 bits (359), Expect = 0.0 Identities = 518/571 (90%) Strand = Plus / Plus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 796 gagaaatgccaccttatttacttgcaaaggatctgattttacaaattattggtgagattt 855 Query: 61 ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120 |||||||||| || ||||||| ||| |||||||||||||||||||| | |||||||||| Sbjct: 856 ctgtatctggcgcaacatacaaatccatggagtttgttggatcaactgtggaaagtctaa 915 Query: 121 ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 916 atatggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtg 975 Query: 181 ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240 |||||||||| ||| ||||||||||||| || |||||||| |||||||| || ||||| | Sbjct: 976 ttgtgcctgccgatcaaactacatttaactatcttgagggcaagacatcagttgaatacg 1035 Query: 241 agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1036 agcctgtctatagtgatgctcaggccagatttgttagtgactaccggtttgatgtatcca 1095 Query: 301 aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360 |||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||| | Sbjct: 1096 aattggagccagttattgccaagccacattcacctgacaaccgtgctctagcaagagagt 1155 Query: 361 gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||||| Sbjct: 1156 gcaaagatgtcaagattgaccgggtctatatcggttcttgtactggaggtaaaactgagg 1215 Query: 421 actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480 |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1216 acttctttgctgctgcgaaggtgttcttagcttcggggaagaaggttaaagttcccactt 1275 Query: 481 ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540 ||||||| || ||||| |||||||||||||||||| | |||||| |||| ||||||||| Sbjct: 1276 ttctcgttccggcgacacaaaaggtgtggatggacatttatagcatccctgtaccaggag 1335 Query: 541 ctggtggcaaaacatgttcccagatatttga 571 | ||||||||||| || || ||||||||||| Sbjct: 1336 ccggtggcaaaacttgctcacagatatttga 1366
>gb|AY106414.1| Zea mays PCO109372 mRNA sequence Length = 1863 Score = 712 bits (359), Expect = 0.0 Identities = 518/571 (90%) Strand = Plus / Plus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60 |||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 793 gagagatgccgccttatttacttgcgaaggatctgattttgcaaattattggagagattt 852 Query: 61 ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120 | ||||||||||| || |||| ||| |||||||||||||||||||| |||||||||||| Sbjct: 853 cagtatctggtgcgacctacaaatcaatggagtttgttggatcaactgtagaaagtctaa 912 Query: 121 ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180 | |||||||| || |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 913 ccatggaagagcgtatgacactatgcaacatggttattgaagctggtggaaagaacggtg 972 Query: 181 ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 973 ttgtgcctgctgatgaaactacatttaaataccttgagggtaagacatcagtcgattatg 1032 Query: 241 agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300 | |||||||| ||||||||||| |||||||||| || |||||||||||||||||||| | Sbjct: 1033 aacctgtctacagtgatgctcaagccagattttttagcgactaccggtttgatgtatcaa 1092 Query: 301 aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360 || | |||||||||||||| ||||||||||| |||||||||||||||| |||| |||||| Sbjct: 1093 aactggagccagtagttgccaagccacattcgcctgacaaccgtgctccagcacgagaat 1152 Query: 361 gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1153 gcaaagatgtgaagatcgaccgagtctatattggttcttgcactggtggtaagaccgagg 1212 Query: 421 actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480 | || ||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 1213 atttccttgctgctgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 1272 Query: 481 ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540 |||| |||||||| || |||||||||||| ||||| | ||||||||||| |||||||||| Sbjct: 1273 ttcttgtccctgccacacaaaaggtgtggttggacatatatagcctccctgtaccaggat 1332 Query: 541 ctggtggcaaaacatgttcccagatatttga 571 ||||||||||||| || |||||||||||||| Sbjct: 1333 ctggtggcaaaacttgctcccagatatttga 1363
>gb|AY108671.1| Zea mays PCO109373 mRNA sequence Length = 1642 Score = 690 bits (348), Expect = 0.0 Identities = 513/568 (90%) Strand = Plus / Plus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaaattattggcgagatat 60 |||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 485 gagaaatgccgccttatttacttgcgaaggatctgattttgcaaattattggtgagattt 544 Query: 61 ctgtatctggtgctacatacagatcgatggagtttgttggatcaacaatagaaagtctaa 120 | ||||||||||| || |||| |||||||||||||||||||||||| |||||||||||| Sbjct: 545 cagtatctggtgcaacctacaaatcgatggagtttgttggatcaactgtagaaagtctaa 604 Query: 121 ctatggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtg 180 | ||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||| Sbjct: 605 ccatggaagaacgtatgacactatgcaacatggttgttgaagctggtggaaagaacggtg 664 Query: 181 ttgtgcctgctgatgaaactacatttaagtaccttgagggtaagacatcggtcgaatatg 240 | |||||||||||||||||||||||||| ||||||||||||| |||||| || || ||| Sbjct: 665 tcgtgcctgctgatgaaactacatttaaataccttgagggtaggacatcagttgattatc 724 Query: 241 agcctgtctatagtgatgctcaggccagattttacagtgactaccggtttgatgtatcta 300 | |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| | Sbjct: 725 aacctgtctacagtgatgctgaggccagattttttagtgactaccggtttgatgtatcga 784 Query: 301 aattagagccagtagttgcgaagccacattcccctgacaaccgtgctctagcaagagaat 360 || | |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 785 aactggagccagtagttgccaagccacattcgcctgacaaccgtgccctagcaagagaat 844 Query: 361 gcaaagatgtcaagattgaccgagtctatattggttcttgcactggtggtaagactgagg 420 |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 845 gcaaagatgtcaagatcgaccgagtctatattggttcctgcactggtggcaagactgagg 904 Query: 421 actttattgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaggttcccactt 480 |||| ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 905 acttccttgctgccgcaaaggtgttcttagcctcgggaaagaaggttaaagttcccacat 964 Query: 481 ttctcgtccctgcgacgcaaaaggtgtggatggacgtgtatagcctccccgtaccaggat 540 | || |||||||| || |||||||||||||||||||| |||||||| || |||||||||| Sbjct: 965 tccttgtccctgccacacaaaaggtgtggatggacgtatatagccttcctgtaccaggat 1024 Query: 541 ctggtggcaaaacatgttcccagatatt 568 |||| |||||||| || |||||||||| Sbjct: 1025 ctggcggcaaaacttgcgcccagatatt 1052
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 188 bits (95), Expect = 1e-44 Identities = 125/135 (92%) Strand = Plus / Minus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1306754 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 1306695 Query: 382 gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441 | |||||||| |||||||| ||||| ||||| ||||||||||| |||||||||| |||| Sbjct: 1306694 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 1306635 Query: 442 tgttcttagcttcgg 456 ||||||||||||||| Sbjct: 1306634 tgttcttagcttcgg 1306620 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1307917 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 1307858 Query: 183 gtgcctgctgatgaaactacatttaagtaccttgagg 219 |||||||| ||| ||||||||||||| || ||||||| Sbjct: 1307857 gtgcctgccgatcaaactacatttaactatcttgagg 1307821 Score = 79.8 bits (40), Expect = 9e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaa 44 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1308212 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 1308169 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 45 attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104 |||||||| ||||| ||||||||||| || ||||||| ||| |||||||||||||||||| Sbjct: 1308078 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 1308019 Query: 105 acaatagaaagtctaa 120 || | |||||||||| Sbjct: 1308018 actgtggaaagtctaa 1308003 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 217 agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268 |||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 1307651 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 1307600 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || | Sbjct: 1305837 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 1305778 Query: 562 agatatttga 571 |||||||||| Sbjct: 1305777 agatatttga 1305768 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 459 aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506 ||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 1305966 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 1305919 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 276 agtgactaccggtttgatgtatctaaattagagccagt 313 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 1306889 agtgactaccggtttgatgtatccaaattggagccagt 1306852 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 33195235 taaattagagccagtagttg 33195254
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 188 bits (95), Expect = 1e-44 Identities = 125/135 (92%) Strand = Plus / Minus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 137845 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 137786 Query: 382 gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441 | |||||||| |||||||| ||||| ||||| ||||||||||| |||||||||| |||| Sbjct: 137785 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 137726 Query: 442 tgttcttagcttcgg 456 ||||||||||||||| Sbjct: 137725 tgttcttagcttcgg 137711 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139008 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 138949 Query: 183 gtgcctgctgatgaaactacatttaagtaccttgagg 219 |||||||| ||| ||||||||||||| || ||||||| Sbjct: 138948 gtgcctgccgatcaaactacatttaactatcttgagg 138912 Score = 79.8 bits (40), Expect = 9e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaa 44 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 139303 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 139260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 45 attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104 |||||||| ||||| ||||||||||| || ||||||| ||| |||||||||||||||||| Sbjct: 139169 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 139110 Query: 105 acaatagaaagtctaa 120 || | |||||||||| Sbjct: 139109 actgtggaaagtctaa 139094 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 217 agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268 |||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 138742 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 138691 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || | Sbjct: 136928 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 136869 Query: 562 agatatttga 571 |||||||||| Sbjct: 136868 agatatttga 136859 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 459 aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506 ||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 137057 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 137010 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 276 agtgactaccggtttgatgtatctaaattagagccagt 313 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 137980 agtgactaccggtttgatgtatccaaattggagccagt 137943
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 188 bits (95), Expect = 1e-44 Identities = 125/135 (92%) Strand = Plus / Minus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 80783 agccacattcacctgacaaccgtgctctagcaagagagtgcaaagatgtcaagattgacc 80724 Query: 382 gagtctatattggttcttgcactggtggtaagactgaggactttattgctgctgcaaagg 441 | |||||||| |||||||| ||||| ||||| ||||||||||| |||||||||| |||| Sbjct: 80723 gggtctatatcggttcttgtactggaggtaaaactgaggacttctttgctgctgcgaagg 80664 Query: 442 tgttcttagcttcgg 456 ||||||||||||||| Sbjct: 80663 tgttcttagcttcgg 80649 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 81946 atggaagagcgaatgacactgtgcaacatggttattgaagctggtggcaagaatggtgtt 81887 Query: 183 gtgcctgctgatgaaactacatttaagtaccttgagg 219 |||||||| ||| ||||||||||||| || ||||||| Sbjct: 81886 gtgcctgccgatcaaactacatttaactatcttgagg 81850 Score = 79.8 bits (40), Expect = 9e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1 gagaaatgccaccttatttacttgctaaggatctgattttacaa 44 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 82241 gagaaatgccaccttatttacttgcaaaggatctgattttacaa 82198 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 45 attattggcgagatatctgtatctggtgctacatacagatcgatggagtttgttggatca 104 |||||||| ||||| ||||||||||| || ||||||| ||| |||||||||||||||||| Sbjct: 82107 attattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgttggatca 82048 Query: 105 acaatagaaagtctaa 120 || | |||||||||| Sbjct: 82047 actgtggaaagtctaa 82032 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 217 agggtaagacatcggtcgaatatgagcctgtctatagtgatgctcaggccag 268 |||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 81680 agggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccag 81629 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 |||||||||||||| | |||||| |||| ||||||||| | ||||||||||| || || | Sbjct: 79866 aggtgtggatggacatttatagcatccctgtaccaggagccggtggcaaaacttgctcac 79807 Query: 562 agatatttga 571 |||||||||| Sbjct: 79806 agatatttga 79797 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 459 aagaaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtg 506 ||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 79995 aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtg 79948 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 276 agtgactaccggtttgatgtatctaaattagagccagt 313 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 80918 agtgactaccggtttgatgtatccaaattggagccagt 80881
>ref|NM_117417.2| Arabidopsis thaliana hydro-lyase/ lyase AT4G13430 mRNA, complete cds Length = 1871 Score = 125 bits (63), Expect = 2e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 27 aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86 |||||||||||||||||||||||||| || |||||||| ||||||| || |||| || Sbjct: 834 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 893 Query: 87 atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146 |||||||| ||| |||| || |||||||| | |||||||||| |||||||| ||||| Sbjct: 894 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 953 Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181 ||||||||| | |||||||| |||||||||||||| Sbjct: 954 aacatggttgtggaagctgggggaaagaatggtgt 988 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 321 aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380 ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| Sbjct: 1128 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1187 Query: 381 cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433 |||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 1188 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1240 Score = 48.1 bits (24), Expect = 0.032 Identities = 90/112 (80%) Strand = Plus / Plus Query: 462 aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521 ||||| || ||||| ||||| || ||||| || || || |||||||||||||| |||||| Sbjct: 1269 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1328 Query: 522 agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573 ||||| ||||| ||| | ||||| || |||||| | ||||| ||||||| Sbjct: 1329 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1380
>gb|DQ448855.1| Theobroma cacao putative 3-isopropylmalate dehydratase large subunit mRNA, partial cds Length = 361 Score = 125 bits (63), Expect = 2e-25 Identities = 138/163 (84%) Strand = Plus / Plus Query: 15 tatttacttgctaaggatctgattttacaaattattggcgagatatctgtatctggtgct 74 ||||| ||||| |||||| |||||||||| || ||||| || ||||||||| ||||||| Sbjct: 199 tatttgcttgcaaaggatttgattttacagatcattggtgaaatatctgtagctggtgca 258 Query: 75 acatacagatcgatggagtttgttggatcaacaatagaaagtctaactatggaagaacga 134 ||||||| ||| ||||||||||||||| |||| | |||||| ||| ||||||||||| Sbjct: 259 acatacaaatccatggagtttgttggaacaactgttgaaagtttaaacatggaagaacgt 318 Query: 135 atgacactgtgcaacatggttattgaagctggtggaaagaatg 177 ||||| | ||||| |||||| |||||||||| |||||||||| Sbjct: 319 atgactttatgcaatatggttgttgaagctgggggaaagaatg 361
>gb|AY117151.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds Length = 1561 Score = 125 bits (63), Expect = 2e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 27 aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86 |||||||||||||||||||||||||| || |||||||| ||||||| || |||| || Sbjct: 754 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 813 Query: 87 atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146 |||||||| ||| |||| || |||||||| | |||||||||| |||||||| ||||| Sbjct: 814 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 873 Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181 ||||||||| | |||||||| |||||||||||||| Sbjct: 874 aacatggttgtggaagctgggggaaagaatggtgt 908 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 321 aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380 ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| Sbjct: 1048 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1107 Query: 381 cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433 |||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 1108 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1160 Score = 48.1 bits (24), Expect = 0.032 Identities = 90/112 (80%) Strand = Plus / Plus Query: 462 aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521 ||||| || ||||| ||||| || ||||| || || || |||||||||||||| |||||| Sbjct: 1189 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1248 Query: 522 agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573 ||||| ||||| ||| | ||||| || |||||| | ||||| ||||||| Sbjct: 1249 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1300
>gb|AY045842.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds Length = 1808 Score = 125 bits (63), Expect = 2e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 27 aaggatctgattttacaaattattggcgagatatctgtatctggtgctacatacagatcg 86 |||||||||||||||||||||||||| || |||||||| ||||||| || |||| || Sbjct: 823 aaggatctgattttacaaattattggtgaaatatctgttgctggtgcaacttacaagacg 882 Query: 87 atggagtttgttggatcaacaatagaaagtctaactatggaagaacgaatgacactgtgc 146 |||||||| ||| |||| || |||||||| | |||||||||| |||||||| ||||| Sbjct: 883 atggagttcagtggtacaactatcgaaagtctgagtatggaagaaagaatgacattgtgc 942 Query: 147 aacatggttattgaagctggtggaaagaatggtgt 181 ||||||||| | |||||||| |||||||||||||| Sbjct: 943 aacatggttgtggaagctgggggaaagaatggtgt 977 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 321 aagccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgac 380 ||||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| Sbjct: 1117 aagcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgac 1176 Query: 381 cgagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433 |||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 1177 agagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 1229 Score = 48.1 bits (24), Expect = 0.032 Identities = 90/112 (80%) Strand = Plus / Plus Query: 462 aaggttaaggttcccacttttctcgtccctgcgacgcaaaaggtgtggatggacgtgtat 521 ||||| || ||||| ||||| || ||||| || || || |||||||||||||| |||||| Sbjct: 1258 aaggtcaaagttccaactttccttgtcccggctactcagaaggtgtggatggatgtgtat 1317 Query: 522 agcctccccgtaccaggatctggtggcaaaacatgttcccagatatttgaag 573 ||||| ||||| ||| | ||||| || |||||| | ||||| ||||||| Sbjct: 1318 gctctcccggtacctggagcaggtggaaagacatgtgcgcagatctttgaag 1369
>gb|AC136679.19| Medicago truncatula clone mth2-22c4, complete sequence Length = 101649 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgtt 182 |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| Sbjct: 79916 atggaagaacgaatgacattgtgcaacatggttgttgaagctggaggaaagaatggtgtt 79975 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 142 tgtgcaacatggttattgaagctggtggaaagaatggtgtt 182 |||||||||||||| ||||| |||| |||||||| |||||| Sbjct: 92362 tgtgcaacatggttgttgaatctggaggaaagaacggtgtt 92402 Score = 48.1 bits (24), Expect = 0.032 Identities = 60/72 (83%) Strand = Plus / Plus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 |||| ||||||||||||||||| || || || || ||||| ||||| || || || || | Sbjct: 84507 aggtttggatggacgtgtatagtcttcctgtccctggatccggtggtaagacttgctcgc 84566 Query: 562 agatatttgaag 573 |||||||||||| Sbjct: 84567 agatatttgaag 84578
>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36 Length = 199634 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| Sbjct: 91965 agcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgaca 91906 Query: 382 gagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433 |||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 91905 gagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 91854 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgt 181 ||||||||| |||||||| |||||||||||||| | |||||||| |||||||||||||| Sbjct: 92622 atggaagaaagaatgacattgtgcaacatggttgtggaagctgggggaaagaatggtgt 92564 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Minus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 ||||||||||||| |||||| ||||| ||||| ||| | ||||| || |||||| | | Sbjct: 91335 aggtgtggatggatgtgtatgctctcccggtacctggagcaggtggaaagacatgtgcgc 91276 Query: 562 agatatttgaag 573 |||| ||||||| Sbjct: 91275 agatctttgaag 91264
>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence (ESSA project) Length = 95432 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||| ||||| ||||||||||| |||||||| |||||||||||||| || || |||||| Sbjct: 75986 agcctcattctcctgacaaccgagctctagctagagaatgcaaagacgtgaaaattgaca 75927 Query: 382 gagtctatattggttcttgcactggtggtaagactgaggactttattgctgc 433 |||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 75926 gagtatacatcggttcttgtactggtgggaagacagaggattttatggctgc 75875 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 123 atggaagaacgaatgacactgtgcaacatggttattgaagctggtggaaagaatggtgt 181 ||||||||| |||||||| |||||||||||||| | |||||||| |||||||||||||| Sbjct: 76643 atggaagaaagaatgacattgtgcaacatggttgtggaagctgggggaaagaatggtgt 76585 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Minus Query: 502 aggtgtggatggacgtgtatagcctccccgtaccaggatctggtggcaaaacatgttccc 561 ||||||||||||| |||||| ||||| ||||| ||| | ||||| || |||||| | | Sbjct: 75356 aggtgtggatggatgtgtatgctctcccggtacctggagcaggtggaaagacatgtgcgc 75297 Query: 562 agatatttgaag 573 |||| ||||||| Sbjct: 75296 agatctttgaag 75285
>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence Length = 115904 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 322 agccacattcccctgacaaccgtgctctagcaagagaatgcaaagatgtcaagattgacc 381 |||||||||| ||||| ||||||||| | |||||||||||||| |||| || ||||||| Sbjct: 53545 agccacattctcctgataaccgtgctttggcaagagaatgcaacaatgttaaaattgacc 53604 Query: 382 gagtctatattggttcttgcactggtggtaagac 415 |||| || ||||| || ||||||||||| ||||| Sbjct: 53605 gagtatacattggatcatgcactggtggaaagac 53638 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 48 attggcgagatatctgtatctggtgctacatacagatcgatggagtttgttgg 100 |||||||| |||||| | |||||||| ||||||| | |||||||||||||||| Sbjct: 52249 attggcgaaatatctatgtctggtgcaacatacaaaacgatggagtttgttgg 52301 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 468 aaggttcccacttttctcgtccctgcgacgcaaaaggtgtg 508 |||||||| |||||||| || ||||| || ||||||||||| Sbjct: 53852 aaggttcctacttttcttgttcctgctacccaaaaggtgtg 53892
>gb|AY191286.1| Aster yellows phytoplasma clone A244 genomic sequence Length = 1886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 122 tatggaagaacgaatgacactgtgcaacatg 152 ||||||||||||||||||| ||||||||||| Sbjct: 1507 tatggaagaacgaatgacagtgtgcaacatg 1537
>gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, complete sequence Length = 178352 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 caatagaaagtctaactatgg 126 ||||||||||||||||||||| Sbjct: 161972 caatagaaagtctaactatgg 161952
>gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, complete sequence Length = 170076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 caatagaaagtctaactatgg 126 ||||||||||||||||||||| Sbjct: 97356 caatagaaagtctaactatgg 97376
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 gaaggttaaggttcccacttt 481 ||||||||||||||||||||| Sbjct: 15424 gaaggttaaggttcccacttt 15404
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 gaaggttaaggttcccacttt 481 ||||||||||||||||||||| Sbjct: 40216472 gaaggttaaggttcccacttt 40216452
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 gaaggttaaggttcccacttt 481 ||||||||||||||||||||| Sbjct: 82250 gaaggttaaggttcccacttt 82230
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 gaaggttaaggttcccacttt 481 ||||||||||||||||||||| Sbjct: 7822 gaaggttaaggttcccacttt 7802
>gb|L35061.1|B4PORFSX Bacteriophage phi-41 orfs L1-12, complete cds's, orf 13, 5' end Length = 10170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 aatggtgttgtgcctgctgat 194 ||||||||||||||||||||| Sbjct: 6320 aatggtgttgtgcctgctgat 6300
>ref|XM_514690.1| PREDICTED: Pan troglodytes LOC458295 (LOC458295), mRNA Length = 3639 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatggtgttgtgcctgctg 192 |||||||||||||||||||| Sbjct: 771 gaatggtgttgtgcctgctg 790
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 35887749 taaattagagccagtagttg 35887768 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 29920085 taaattagagccagtagttg 29920104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 29143344 taaattagagccagtagttg 29143363
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 90521 taaattagagccagtagttg 90502
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 28032 taaattagagccagtagttg 28013
>gb|AF041836.1| Buchnera aphidicola (Schizaphis graminum) plasmid pLeu-Sg, complete plasmid sequence Length = 7967 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 122 tatggaagaacgaatgacactgtgcaacatgg 153 ||||||||||||||||||| | || ||||||| Sbjct: 6567 tatggaagaacgaatgacaatttgtaacatgg 6598
>emb|AL034421.7|HS1137F22 Human DNA sequence from clone RP5-1137F22 on chromosome 20q11.2-12 Contains the 5' end of the CBFA2T2 gene for runt domain core-binding factor alpha subunit 2 and a CpG island, complete sequence Length = 92807 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gttcttgcactggtggtaag 413 |||||||||||||||||||| Sbjct: 80465 gttcttgcactggtggtaag 80484
>ref|XM_781719.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrillin (3I729) (LOC581732), mRNA Length = 3226 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgagatatctgtatctggtgctac 76 |||||| ||||||||||||||||| Sbjct: 105 cgagatttctgtatctggtgctac 82
>gb|AF208159.1| Homo sapiens electroneutral potassium-chloride cotransporter KCC2 (KCC2) mRNA, complete cds Length = 5907 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatggtgttgtgcctgctg 192 |||||||||||||||||||| Sbjct: 465 gaatggtgttgtgcctgctg 484
>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence Length = 191499 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gcaaagatgtcaagattgac 380 |||||||||||||||||||| Sbjct: 40758 gcaaagatgtcaagattgac 40739
>ref|NM_020708.3| Homo sapiens solute carrier family 12, (potassium-chloride transporter) member 5 (SLC12A5), mRNA Length = 6059 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatggtgttgtgcctgctg 192 |||||||||||||||||||| Sbjct: 611 gaatggtgttgtgcctgctg 630
>gb|AC098657.2| Homo sapiens chromosome 1 clone RP11-339A11, complete sequence Length = 158859 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gcaaagatgtcaagattgac 380 |||||||||||||||||||| Sbjct: 82036 gcaaagatgtcaagattgac 82017
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 73376 taaattagagccagtagttg 73357
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 86026 taaattagagccagtagttg 86045
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 27324403 taaattagagccagtagttg 27324422
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 35977879 taaattagagccagtagttg 35977898 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 30011507 taaattagagccagtagttg 30011526 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 29234766 taaattagagccagtagttg 29234785
>gb|AC068339.6| Homo sapiens chromosome 11, clone RP11-328E22, complete sequence Length = 155491 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 caggccagattttacagtga 280 |||||||||||||||||||| Sbjct: 129675 caggccagattttacagtga 129694
>gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, complete sequence Length = 176383 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 atttaagtaccttgagggta 222 |||||||||||||||||||| Sbjct: 96699 atttaagtaccttgagggta 96680
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 67230 taaattagagccagtagttg 67249
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 taaattagagccagtagttg 318 |||||||||||||||||||| Sbjct: 24544 taaattagagccagtagttg 24563
>dbj|AK098371.1| Homo sapiens cDNA FLJ25505 fis, clone CBR04623, highly similar to K-Cl cotransport protein 2, furosemide-sensitive Length = 1549 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatggtgttgtgcctgctg 192 |||||||||||||||||||| Sbjct: 614 gaatggtgttgtgcctgctg 633
>gb|AF076453.1|HSMTGR1E05 Homo sapiens MTG8-like protein (MTGR1) exon 5, complete sequence Length = 738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gttcttgcactggtggtaag 413 |||||||||||||||||||| Sbjct: 329 gttcttgcactggtggtaag 348
>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence Length = 149484 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tgctgatgaaactacatttaagta 211 |||| ||||||||||||||||||| Sbjct: 83188 tgctaatgaaactacatttaagta 83165
>emb|BX000527.12| Mouse DNA sequence from clone RP23-67M6 on chromosome X, complete sequence Length = 5534 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 gtttgttggatcaacaatagaaagtctaacta 123 ||||||| | ||||||||||||| |||||||| Sbjct: 2197 gtttgttagttcaacaatagaaactctaacta 2228
>dbj|AB033002.1| Homo sapiens mRNA for KIAA1176 protein, partial cds Length = 3305 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaatggtgttgtgcctgctg 192 |||||||||||||||||||| Sbjct: 443 gaatggtgttgtgcctgctg 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,476,759 Number of Sequences: 3902068 Number of extensions: 4476759 Number of successful extensions: 77503 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77220 Number of HSP's gapped (non-prelim): 280 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)