ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16b06 |
|---|---|
| Clone Library Name | barley_pub |
>IMB3_MOUSE (Q8BKC5) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5)| (RanBP5) Length = 1097 Score = 162 bits (411), Expect = 6e-40 Identities = 82/222 (36%), Positives = 134/222 (60%) Frame = +3 Query: 3 LGTLIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDT 182 L ++ ++K LP+F++L + ++ + +R+ +CIFDDI E C ++ KY + Sbjct: 846 LHSIFSSYKEKVLPWFEQLLPLIVNLICPQRPWPDRQWGLCIFDDIVEHCSPASFKYAEY 905 Query: 183 YVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADN 362 ++ +L+ D++ +VRQAA YGLGV A+FGG +RP +AL L VI+ PEA+ +N Sbjct: 906 FISPMLQYVCDNSPEVRQAAAYGLGVMAQFGGDNYRPFCTDALPLLVRVIQAPEAKTKEN 965 Query: 363 IMAYDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDA 542 + A +N +SA+GKI +F D ++ +V+P WL LP+ +DK EA LC ++E + Sbjct: 966 VNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFSYLCDLIESNHP 1025 Query: 543 LVLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKR 668 +VLGP++ LPKI SI AE + D R+ NV+++ Sbjct: 1026 IVLGPNNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQ 1067
>RNBP6_MOUSE (Q8BIV3) Ran-binding protein 6 (RanBP6) (Fragment)| Length = 439 Score = 156 bits (394), Expect = 6e-38 Identities = 81/222 (36%), Positives = 132/222 (59%) Frame = +3 Query: 3 LGTLIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDT 182 L +L T+K LP+F++L + ++ + +R+ +CIFDDI E C ++ KY + Sbjct: 188 LHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEY 247 Query: 183 YVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADN 362 + +L D+N +VRQAA YGLGV A+FGG +R L EA+ L VI+ ++ N Sbjct: 248 FRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKN 307 Query: 363 IMAYDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDA 542 ++A +N +SA+GKI +F + ++ +V+P WL LP+ +DK EA + LC ++E + Sbjct: 308 VIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHP 367 Query: 543 LVLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKR 668 +V+GP++ LPKI+SI AE N D R+ NV+++ Sbjct: 368 VVIGPNNSNLPKIISIIAEGKINETISHEDPCAKRLANVVRQ 409
>IMB3_HUMAN (O00410) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5)| (RanBP5) Length = 1097 Score = 155 bits (393), Expect = 8e-38 Identities = 78/222 (35%), Positives = 134/222 (60%) Frame = +3 Query: 3 LGTLIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDT 182 L ++ ++K LP+F++L + ++ + +R+ +CIFDD+ E C ++ KY + Sbjct: 846 LHSIFSSYKEKVLPWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEY 905 Query: 183 YVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADN 362 ++ +L+ D++ +VRQAA YGLGV A++GG +RP EAL L VI+ +++ +N Sbjct: 906 FLRPMLQYVCDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKEN 965 Query: 363 IMAYDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDA 542 + A +N +SA+GKI +F D ++ +V+P WL LP+ +DK EA + LC ++E + Sbjct: 966 VNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHP 1025 Query: 543 LVLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKR 668 +VLGP++ LPKI SI AE + D R+ NV+++ Sbjct: 1026 IVLGPNNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQ 1067
>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)| Length = 1105 Score = 155 bits (392), Expect = 1e-37 Identities = 81/222 (36%), Positives = 131/222 (59%) Frame = +3 Query: 3 LGTLIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDT 182 L +L T+K LP+F++L + ++ + +R+ +CIFDDI E C ++ KY + Sbjct: 854 LHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEY 913 Query: 183 YVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADN 362 + +L D+N +VRQAA YGLGV A+FGG +R L EA+ L VI+ ++ N Sbjct: 914 FRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKN 973 Query: 363 IMAYDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDA 542 ++A +N +SA+GKI +F + ++ +V+P WL LP+ +DK EA LC ++E + Sbjct: 974 VIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHP 1033 Query: 543 LVLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKR 668 +V+GP++ LPKI+SI AE N D R+ NV+++ Sbjct: 1034 VVIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQ 1075
>IMB3_SCHPO (O74476) Importin beta-3 subunit| Length = 1095 Score = 109 bits (273), Expect = 7e-24 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 1/219 (0%) Frame = +3 Query: 12 LIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVP 191 ++K K +F PF++ L Y+ L + T ++ A+C+ DD+ E + Y D ++P Sbjct: 854 VLKIHKTAFCPFWERLLPYMDGFLSGNDTVA-KQWALCMMDDLIEFTGPDSWNYKDHFLP 912 Query: 192 FLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADNIMA 371 +L E ++RQAA YG+GV A+ GG + + AL L ++ P+A+ + I A Sbjct: 913 YLAEGIQSSEPEIRQAASYGIGVAAQHGGELYAEICSSALPALFKMLELPDARDEEQIYA 972 Query: 372 YDNAVSALGKICQFHRDGI-DAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDALV 548 +N A+ KIC+F + D +V+ W+ LP+ D+ +A + L ++E++ V Sbjct: 973 TENICVAICKICRFCSQRVQDLDKVVTYWINTLPVTHDEDDAPYAYTFLAELMEQNHVAV 1032 Query: 549 LGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLK 665 + +P I++I AE +G + T TR++ K Sbjct: 1033 ----ASQMPTIITILAETFASG--VLRGRTLTRLMEASK 1065
>IMB4_SCHPO (O60100) Probable importin beta-4 subunit (Karyopherin beta-4| subunit) (Importin 123) Length = 1067 Score = 65.1 bits (157), Expect = 2e-10 Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 2/217 (0%) Frame = +3 Query: 21 TFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLL 200 +F SF F+ ++ Y K ER +A+ ++A + + + Sbjct: 846 SFADSFKVFYPQIVKYYM-----SKNGNERAMAVACVGEVAGGIESAITPFTRDVFSLFM 900 Query: 201 EASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADNIM--AY 374 A D +VR A Y +G+ +F + S+ N+++ + + A Sbjct: 901 AALEDSEGEVRSNAAYSMGLLCQFSTE-------DLSSEYLNILQKLQPFFTQEVFRTAL 953 Query: 375 DNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERSDALVLG 554 DNA+ + ++ +++ I QV+P LP+K+D +E ++ + ++ + + ++ Sbjct: 954 DNAIGCISRLILHNQNAIPVDQVLPIVFSKLPLKEDYLENAPLYHMILALYRQQNPCLV- 1012 Query: 555 PHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLK 665 Q+L +++ +FA VL E DE + +++++K Sbjct: 1013 ---QHLGELIPVFASVLTGSPEQLNDELRSELLSMVK 1046
>IMB3_YEAST (P32337) Importin beta-3 subunit (Karyopherin beta-3 subunit)| (Protein secretion enhancer 1) Length = 1089 Score = 57.8 bits (138), Expect = 3e-08 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%) Frame = +3 Query: 117 AICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPL 296 A+ + D+ + E + ++P + E ++ +RQAA Y +GVCA++ T+ + Sbjct: 879 ALVVIGDLIQYGGEQTASMKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAPSTYADV 938 Query: 297 VGEALSKLNNVIRHPEAQHADNIMAYDNAVSALGKICQFHRDGIDAAQVIPA-WLGCLPI 473 L L ++ P ++ +N + +NA +A+ KI + I A W LP Sbjct: 939 CIPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIPNVDTYTANWFKTLPT 998 Query: 474 KDDKIEAKVVHDQLCSMVERSDALV 548 DK A + L ++E + +V Sbjct: 999 ITDKEAASFNYQFLSQLIENNSPIV 1023 Score = 34.7 bits (78), Expect = 0.27 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = +3 Query: 42 PFFDELSVYVTPMLGKDKT-AEERRIAICIFDDIAEQCRESALKYYDTYVPFL---LEAS 209 P+ D L + +L +K +E+ + F IAE + +KYYDT +P L L+ + Sbjct: 489 PYLDSLLTNLLVLLQSNKLYVQEQALTTIAF--IAEAAKNKFIKYYDTLMPLLLNVLKVN 546 Query: 210 NDDNS 224 N DNS Sbjct: 547 NKDNS 551
>IPO4_HUMAN (Q8TEX9) Importin-4 (Importin 4b) (Imp4b) (Ran-binding protein 4)| (RanBP4) Length = 1081 Score = 52.4 bits (124), Expect = 1e-06 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%) Frame = +3 Query: 33 SFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASN 212 SF PFF + + T E+ A+ + + ++ ++ +P LL + Sbjct: 850 SFAPFFAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQ 909 Query: 213 DDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADNIMAYDNAVSA 392 + + +VR A++G+GV AE GGH + E KL ++ P + DN A Sbjct: 910 EADPEVRSNAIFGMGVLAEHGGHPAQ----EHFPKLLGLL-FPLLARERHDRVRDNICGA 964 Query: 393 LGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQLCSMVERS--DALVLGPHSQ 566 L ++ QV+ A L LP+K+D +E V +L S + +S D ++ Sbjct: 965 LARLLMASPTRKPEPQVLAALLHALPLKED-LEEWVTIGRLFSFLYQSSPDQVI-----D 1018 Query: 567 YLPKIVSIFAEVLCNGK 617 P+++ I + +L + K Sbjct: 1019 VAPELLRICSLILADNK 1035
>IPO4_MOUSE (Q8VI75) Importin-4 (Importin 4a) (Imp4a) (Ran-binding protein 4)| (RanBP4) Length = 1082 Score = 48.5 bits (114), Expect = 2e-05 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 7/160 (4%) Frame = +3 Query: 33 SFLPFFDELSVYVTPMLGKDK---TAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLE 203 +F PFF + ++ +L K K T E+ A+ + + ++ ++ P LL Sbjct: 851 AFAPFF---ATFLPLLLCKTKQSCTVAEKSFAVGTLAESIQGLGTASAQFVSRLFPVLLN 907 Query: 204 ASNDDNSDVRQAAVYGLGVCAEFGG----HTFRPLVGEALSKLNNVIRHPEAQHADNIMA 371 + + + +VR A++GLGV AE GG F L+G L L RH + Sbjct: 908 NAREADPEVRSNAIFGLGVLAEHGGCPAQDHFPKLLGLLLPLLARE-RHDRVR------- 959 Query: 372 YDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIE 491 DN AL ++ G QV+ L LP+K+D E Sbjct: 960 -DNICGALARVLMASPVGKTEPQVLATLLRALPLKEDMEE 998
>IMB4_YEAST (P40069) Importin beta-4 subunit (Karyopherin beta-4 subunit)| (Ran-binding protein YRB4) Length = 1113 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 10/210 (4%) Frame = +3 Query: 3 LGTLIKTFKASFLPFFDELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDT 182 L +L + F FD V + + K+ +R A+ ++A +E ++ Sbjct: 846 LVSLSQALAGDFAKVFDNFRPVVFGLF-QSKSKNKRSSAVGAASELALGMKEQNPFVHEM 904 Query: 183 YVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLVGEALSKLNNVI---------- 332 ++ ++D + +VR A YG+G+ E+ + L L ++ Sbjct: 905 LEALVIRLTSDKSLEVRGNAAYGVGLLCEYASMDISAVYEPVLKALYELLSAADQKALAA 964 Query: 333 RHPEAQHADNIMAYDNAVSALGKICQFHRDGIDAAQVIPAWLGCLPIKDDKIEAKVVHDQ 512 EA AY NA + ++ + + Q +PA L LP+ E + + Sbjct: 965 EDDEATREIIDRAYANASGCVARMALKNSALVPLEQTVPALLAHLPLNTGFEEYNPIFEL 1024 Query: 513 LCSMVERSDALVLGPHSQYLPKIVSIFAEV 602 + + + + ++ + P+I+ IF+ V Sbjct: 1025 IMKLYQENSPVI----TNETPRIIEIFSAV 1050
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 33.1 bits (74), Expect = 0.78 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 315 LTGPLQLKDGKYGHQTQHIL-PGRKQQPAEHLSYHHWMPPTEKEHRYHNTSEQ 160 LT PLQL G+ G+ + PG+ QQP + W + +H Y+ TS Q Sbjct: 680 LTSPLQLGQGQQGYYPTSLQQPGQGQQPGQ------WQQSGQGQHGYYPTSPQ 726
>CAT3_NEUCR (Q9C169) Catalase-3 precursor (EC 1.11.1.6)| Length = 719 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Frame = +3 Query: 270 FGGHTFRPLVGEALSKLNNVIRHPEAQHADNIMAYDNAVSALGKICQFHR----DGIDAA 437 FG HTFR + + SKL V H + + + ++ A GK FHR D I++ Sbjct: 246 FGIHTFRLVTEDGKSKL--VKWHWKTKQGKAALVWEEAQVLAGKNADFHRQDLWDAIESG 303 Query: 438 QVIPAW-LGCLPIKDDKIEA 494 P+W L I +DK +A Sbjct: 304 NA-PSWELAVQLIDEDKAQA 322
>SYP_CHLPN (Q9Z851) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 568 Score = 26.6 bits (57), Expect(2) = 1.8 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = +1 Query: 328 LSDIQKHNMQIILWHMIMLFQHLGKYVNFIAMGLMRLRSFQHGLAACL*KMTRLKQKSCM 507 L+ I + + L H L+QH G++ F + GL+ + G + CL + + Sbjct: 61 LNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKDREGKSHCL----APTHEEVI 116 Query: 508 ISFVQWW 528 SFV W Sbjct: 117 CSFVAQW 123 Score = 23.9 bits (50), Expect(2) = 1.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +3 Query: 273 GGHTFRPLVGEALSKLNNVIR 335 G +T+ PL+ +SK+ N+IR Sbjct: 38 GVYTYTPLLWRVVSKMMNIIR 58
>Y1559_STAAM (P67272) UPF0135 protein SAV1559| Length = 366 Score = 31.2 bits (69), Expect = 2.9 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +3 Query: 75 PMLGK-DKTAEERRIAICIFDDIAEQCR-ESALKYYDTYVPFLLEASNDDNSDVRQAAVY 248 P +G+ DK + + I D ++ R E +K Y Y E D +++Q ++Y Sbjct: 182 PTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPY-----ETPVFDFIEIKQTSLY 236 Query: 249 GLGVCAEFGGH-TFRPLVGEALSKLN 323 GLGV AE T + SKLN Sbjct: 237 GLGVMAEVDNQMTLEDFAADIKSKLN 262
>Y1388_STAAN (P67273) UPF0135 protein SA1388| Length = 366 Score = 31.2 bits (69), Expect = 2.9 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +3 Query: 75 PMLGK-DKTAEERRIAICIFDDIAEQCR-ESALKYYDTYVPFLLEASNDDNSDVRQAAVY 248 P +G+ DK + + I D ++ R E +K Y Y E D +++Q ++Y Sbjct: 182 PTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPY-----ETPVFDFIEIKQTSLY 236 Query: 249 GLGVCAEFGGH-TFRPLVGEALSKLN 323 GLGV AE T + SKLN Sbjct: 237 GLGVMAEVDNQMTLEDFAADIKSKLN 262
>YDBI_BACSU (P96604) Hypothetical UPF0118 protein ydbI| Length = 350 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 252 LGVCAEFGGHTFRPLVGEALSKLNNVIRHPEAQHADNIMAYDNAVSALGKI 404 L V GG F P+V + +L I+H A H D+I +D S G I Sbjct: 76 LAVLLTVGGFVFYPVVAAQIQQLVKQIKH-IAYHPDSIPFFDEITSVFGDI 125
>MCRA_METVA (P07961) Methyl-coenzyme M reductase alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) Length = 553 Score = 30.4 bits (67), Expect = 5.0 Identities = 19/75 (25%), Positives = 30/75 (40%) Frame = +3 Query: 51 DELSVYVTPMLGKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDV 230 D+ S Y + K + + + +DIA + +L+ YD Y L + Sbjct: 347 DDFSYYALDYVEKKYGRMGTKATMDVVEDIASEVTLYSLEQYDEYPALLEDHFGGSQRAA 406 Query: 231 RQAAVYGLGVCAEFG 275 AA G+GVC G Sbjct: 407 VAAAASGIGVCMATG 421
>CPEZ_SYNPY (Q02175) Bilin biosynthesis protein cpeZ| Length = 186 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +3 Query: 144 EQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGHTFRPLV 299 + C + Y+D +P LL ND + + + AV GLGV FG PL+ Sbjct: 2 DACVSMSENYFDEALPRLLALLNDPDPTIYRTAVKGLGV---FGHGVLFPLL 50
>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein| (UbcH7-associated protein 1) Length = 2517 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 315 KLNNVIRHPEAQHADNIMAYDNAVSALGKIC 407 +LN V+RH E AD + D A ALGK C Sbjct: 1342 RLNRVLRH-EQNFADRFLPDDEAAQALGKTC 1371
>PARC_MOUSE (Q80TT8) p53-associated parkin-like cytoplasmic protein| Length = 1865 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 315 KLNNVIRHPEAQHADNIMAYDNAVSALGKIC 407 +LN V+RH E AD + D A ALGK C Sbjct: 679 RLNRVLRH-EQNFADRFLPDDEAAQALGKTC 708
>Y1616_STAAC (Q5HFK1) UPF0135 protein SACOL1616| Length = 366 Score = 29.6 bits (65), Expect = 8.6 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = +3 Query: 75 PMLGK-DKTAEERRIAICIFDDIAEQCR-ESALKYYDTYVPFLLEASNDDNSDVRQAAVY 248 P +G+ DK + I D ++ R E +K Y Y E D +++Q ++Y Sbjct: 182 PTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPY-----ETPVFDFIEIKQTSLY 236 Query: 249 GLGVCAEFGGH-TFRPLVGEALSKLN 323 GLGV AE T + SKLN Sbjct: 237 GLGVMAEVDNQMTLEDFAADIKSKLN 262
>Y1511_STAAW (Q8NWB9) UPF0135 protein MW1511| Length = 366 Score = 29.6 bits (65), Expect = 8.6 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = +3 Query: 75 PMLGK-DKTAEERRIAICIFDDIAEQCR-ESALKYYDTYVPFLLEASNDDNSDVRQAAVY 248 P +G+ DK + I D ++ R E +K Y Y E D +++Q ++Y Sbjct: 182 PTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPY-----ETPVFDFIEIKQTSLY 236 Query: 249 GLGVCAEFGGH-TFRPLVGEALSKLN 323 GLGV AE T + SKLN Sbjct: 237 GLGVMAEVDNQMTLEDFAADIKSKLN 262
>Y1497_STAAS (Q6G907) UPF0135 protein SAS1497| Length = 366 Score = 29.6 bits (65), Expect = 8.6 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = +3 Query: 75 PMLGK-DKTAEERRIAICIFDDIAEQCR-ESALKYYDTYVPFLLEASNDDNSDVRQAAVY 248 P +G+ DK + I D ++ R E +K Y Y E D +++Q ++Y Sbjct: 182 PTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPY-----ETPVFDFIEIKQTSLY 236 Query: 249 GLGVCAEFGGH-TFRPLVGEALSKLN 323 GLGV AE T + SKLN Sbjct: 237 GLGVMAEVDNQMTLEDFAADIKSKLN 262
>AFT1_YEAST (P22149) Iron-regulated transcriptional activator AFT1 (Activator| of iron transcription protein 1) Length = 690 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -2 Query: 252 GRKQQPAEHLSYHHWMPPTEKEHRYHNTSE---QTHD 151 G +QQP + L YH P H H T + QTH+ Sbjct: 624 GPQQQPPQQLQYHQNQPHDGHNHEQHQTVQKDMQTHE 660 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,844,639 Number of Sequences: 219361 Number of extensions: 1924161 Number of successful extensions: 5501 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5492 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
