ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478818.1| Oryza sativa (japonica cultivar-group), mRNA 539 e-150
2gb|AY110830.1| Zea mays CL4092_1 mRNA sequence 333 4e-88
3gb|AY112241.1| Zea mays CL4092_-2 mRNA sequence 159 1e-35
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
6dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7ref|XM_469416.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
8gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 90 1e-14
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 1e-14
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
11dbj|AK100005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
12dbj|AK068293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
13dbj|AK060273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
14ref|NM_121987.2| Arabidopsis thaliana EMB2734; lyase AT5G19820 (... 78 4e-11
15gb|AY051083.1| Arabidopsis thaliana unknown protein (At5g19820) ... 78 4e-11
16gb|AY035044.1| Arabidopsis thaliana unknown protein (At5g19820) ... 78 4e-11
17gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 72 3e-09
18gb|AC170580.3| Medicago truncatula chromosome 7 BAC clone mte1-3... 72 3e-09
19gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 70 1e-08
20dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone... 68 4e-08
21gb|AC171267.17| Medicago truncatula clone mth2-17i7, complete se... 62 2e-06
22gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 56 2e-04
23gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete... 54 6e-04
24gb|AY106586.1| Zea mays PCO088725 mRNA sequence 50 0.010
25emb|Z68871.2|HSU157D4 Human DNA sequence from clone LL0XNC01-157... 42 2.3
26emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chr... 42 2.3
27emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chr... 42 2.3
28gb|AF479897.1| Saccharomyces cerevisiae YGR174W-A gene, complete... 42 2.3
29emb|Z72960.1|SCYGR175C S.cerevisiae chromosome VII reading frame... 42 2.3
30emb|Z72959.1|SCYGR174C S.cerevisiae chromosome VII reading frame... 42 2.3
31gb|M64994.1|YSCERG1A Saccharomyces cerevisiae squalene epoxidase... 42 2.3
32gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, comp... 40 9.2
33gb|AC150993.4| Bos taurus BAC CH240-186K21 (Children's Hospital... 40 9.2
34ref|NM_013811.1| Mus musculus dynein, axonemal, heavy chain 8 (D... 40 9.2
35gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, co... 40 9.2
36gb|AF356523.1| Mus musculus haplotype t axonemal dynein heavy ch... 40 9.2
37gb|AF356522.1| Mus musculus haplotype t axonemal dynein heavy ch... 40 9.2
38gb|AF356521.1| Mus musculus axonemal dynein heavy chain 8 short ... 40 9.2
39gb|AF356520.1| Mus musculus axonemal dynein heavy chain 8 long f... 40 9.2
40ref|XM_622820.3| PREDICTED: Mus musculus similar to dynein, axon... 40 9.2
41emb|CR940306.3| M.truncatula DNA sequence from clone MTH2-10B11 ... 40 9.2
42ref|XM_803717.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.2
43ref|XM_805808.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.2
44gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, comple... 40 9.2
45gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete s... 40 9.2
46gb|AF173167.3| Pseudomonas alcaligenes putative transposase, put... 40 9.2
47emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 ... 40 9.2
48emb|Z72728.1|SCYGL206C S.cerevisiae chromosome VII reading frame... 40 9.2
49emb|X52900.1|SCCHC1 Saccharomyces cerevisiae CHC1 gene for clath... 40 9.2
50gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 40 9.2
51gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 40 9.2
52gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I... 40 9.2
53dbj|AK034789.1| Mus musculus 12 days embryo embryonic body betwe... 40 9.2
54gb|AF363577.1|AF363577 Mus musculus haplotype t axonemal dynein ... 40 9.2
55gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 fr... 40 9.2
56gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain ... 40 9.2
57gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (Cal... 40 9.2
58gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, compl... 40 9.2
59gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome... 40 9.2
60gb|DQ332098.1| Synthetic construct Saccharomyces cerevisiae clon... 40 9.2
61emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in ... 40 9.2
62emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chr... 40 9.2
63gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosom... 40 9.2
64gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosom... 40 9.2
65emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr... 40 9.2
66gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3... 40 9.2
67gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map ... 40 9.2
68dbj|D88268.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 9.2
69dbj|D87008.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 9.2 
>ref|XM_478818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3372

 Score =  539 bits (272), Expect = e-150
 Identities = 554/648 (85%)
 Strand = Plus / Plus

                                                                        
Query: 9    actttgattaaaacctttaaagcttctttcttgccgttctttgatgagctatctgtgtac 68
            ||||| ||||| ||||| |||||||||||  |||| ||||||||||| || ||||| |||
Sbjct: 2617 actttaattaagaccttcaaagcttcttttctgccattctttgatgaactgtctgtatac 2676

                                                                        
Query: 69   gttacaccaatgctgggaaaggacaagacagctgaggagagaaggatagctatctgcatt 128
             | ||||| ||| ||||||| || ||||| ||||| |||||||||||||||||||| || 
Sbjct: 2677 atcacacctatgttgggaaaagataagactgctgaagagagaaggatagctatctgtata 2736

                                                                        
Query: 129  tttgacgacattgcagagcaatgtcgtgagtctgctctgaagtattatgatacctatgtt 188
            ||||| || |||||||||||||||||||| |||||||| |||||||||||||| ||  | 
Sbjct: 2737 tttgatgatattgcagagcaatgtcgtgaatctgctctcaagtattatgatacataccta 2796

                                                                        
Query: 189  ccttttctgttggaggcatccaatgatgataactcagatgttcggcaggctgctgtttac 248
            ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| || 
Sbjct: 2797 ccttttctgctggaggcatccaatgatgagaactcagatgttcggcaggctgctgtctat 2856

                                                                        
Query: 249  ggcctgggagtatgtgctgagtttggtggccatactttccgtcctttagttggagaggcc 308
            ||  |||| ||||||||||| ||||| || |||  |||||| ||  | ||||||||||| 
Sbjct: 2857 ggtgtgggtgtatgtgctgaatttggcggtcatgttttccgcccacttgttggagaggcg 2916

                                                                        
Query: 309  ctgtcaaagctgaacaacgttatcagacatccagaagcacaacatgcagataatattatg 368
            ||||||||| ||||||| ||||||| |||||| |||||| | |||||||| ||||| |||
Sbjct: 2917 ctgtcaaagttgaacaatgttatcacacatcctgaagcaaagcatgcagacaatataatg 2976

                                                                        
Query: 369  gcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatgggatt 428
            |||||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||||| || 
Sbjct: 2977 gcatatgacaatgctgtttcagcgcttggtaaaatatgccaattccatcgtgatggtatc 3036

                                                                        
Query: 429  gatgcggctcaggtcattccagcatggcttggctgcttgcctataaaagatgacaagatt 488
            ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 3037 gatgcagctcaggtcattcctgcctggcttggttgcttgcctataaaagatgacaagatt 3096

                                                                        
Query: 489  gaagcaaaagtcgtgcatgatcagctttgttcaatggtggagagatcggatgcactggtt 548
            ||||||||||| || || |||||||| |  |||||||| || ||||||||||||    ||
Sbjct: 3097 gaagcaaaagttgtacacgatcagctctcctcaatggttgaaagatcggatgcagatatt 3156

                                                                        
Query: 549  cttggacctcacagtcagtatcttcctaaaatagtttctatttttgctgaggttctgtgc 608
            ||||| ||||| || || |||||||| ||||| ||||| |||||||| |||||| | |||
Sbjct: 3157 cttggtcctcatagccaatatcttccaaaaattgtttcaatttttgcggaggttttatgc 3216

                                                            
Query: 609  aatggaaaggagcttgcaacagatgaaactaccacccggatgatcaat 656
            || ||||  |||||||| ||||||||||| ||||  |||||| |||||
Sbjct: 3217 aacggaacagagcttgctacagatgaaacaaccaagcggatggtcaat 3264
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>gb|AY110830.1| Zea mays CL4092_1 mRNA sequence
          Length = 1007

 Score =  333 bits (168), Expect = 4e-88
 Identities = 457/557 (82%), Gaps = 1/557 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  gggaaaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgc 142
           |||||| || || ||| |||| |||||||||||||||||||| |     || ||  ||||
Sbjct: 994 gggaaaagataaaacacctgaagagagaaggatagctatctgtannnnngatgatgttgc 935

                                                                       
Query: 143 agagcaatgtcgtgagtctgctctgaagtattatgatacctatgttccttttctgttgga 202
           ||||||||| ||||| || ||||||||||||||||| || ||  ||||||| || |||||
Sbjct: 934 agagcaatgccgtgaatcagctctgaagtattatgacacataccttcctttccttttgga 875

                                                                       
Query: 203 ggcatccaatgatgataactcagatgttcggcaggctgctgtttacggcctgggagtatg 262
           |||||| || ||||| || ||||||||||||||||||||||| || ||  |||| |||||
Sbjct: 874 ggcatcaaacgatgaaaattcagatgttcggcaggctgctgtctatggtgtgggtgtatg 815

                                                                       
Query: 263 tgctgagtttggtggccatactttccgtcctttagttggagaggccctgtcaaagctgaa 322
           ||| ||||||||||| |||      || ||| |||| ||||||||| | |||||  | ||
Sbjct: 814 tgccgagtttggtggtcatgnnnnncgccctctagtaggagaggccttatcaaaattaaa 755

                                                                       
Query: 323 caacgttatcagacatccagaagcacaacatgcagataatattatggcatatgataatgc 382
           ||| ||||| || ||||| || |||| || | | |||||||| ||||||||||| |||||
Sbjct: 754 caatgttataaggcatcctgatgcacgacttcctgataatatcatggcatatgacaatgc 695

                                                                       
Query: 383 tgtttcagcacttgggaaaatatgtcaatttcatcgcgatgggattgatgcggctcaggt 442
           |||||| || ||| |||||||||| ||||||||||| ||||| |||||||| ||||||||
Sbjct: 694 tgtttcggcgctt-ggaaaatatgccaatttcatcgggatggtattgatgcagctcaggt 636

                                                                       
Query: 443 cattccagcatggcttggctgcttgcctataaaagatgacaagattgaagcaaaagtcgt 502
             ||||||| |||||| ||||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 635 tgttccagcctggcttagctgcttgcctataaaagacgacaaggttgaagctaaagttgt 576

                                                                       
Query: 503 gcatgatcagctttgttcaatggtggagagatcggatgcactggttcttggacctcacag 562
            ||||  |||||||| || ||||||||||| ||||||||     ||||||| ||||||||
Sbjct: 575 acatggacagctttgctccatggtggagaggtcggatgctgaaattcttgggcctcacag 516

                                                                       
Query: 563 tcagtatcttcctaaaatagtttctatttttgctgaggttctgtgcaatggaaaggagct 622
           |||||||||||||||||| ||||| |     || |||||| ||||||||||||  || ||
Sbjct: 515 tcagtatcttcctaaaattgtttcaannnnngcagaggttttgtgcaatggaacagaact 456

                            
Query: 623 tgcaacagatgaaacta 639
           ||| || ||||||||||
Sbjct: 455 tgccactgatgaaacta 439
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>gb|AY112241.1| Zea mays CL4092_-2 mRNA sequence
          Length = 483

 Score =  159 bits (80), Expect = 1e-35
 Identities = 151/177 (85%)
 Strand = Plus / Minus

                                                                       
Query: 357 gataatattatggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcat 416
           |||||||| ||||||||||| ||||||||||| || |||||     |||| |||||||||
Sbjct: 362 gataatatcatggcatatgacaatgctgtttcggcgcttggnnnnntatgccaatttcat 303

                                                                       
Query: 417 cgcgatgggattgatgcggctcaggtcattccagcatggcttggctgcttgcctataaaa 476
           || ||||| |||||||| ||||||||  ||||||| |||||| |||||||||||||||||
Sbjct: 302 cgggatggtattgatgcagctcaggttgttccagcctggcttagctgcttgcctataaaa 243

                                                                    
Query: 477 gatgacaagattgaagcaaaagtcgtgcatgatcagctttgttcaatggtggagaga 533
           || |||||| ||||||| ||||| || ||||  |||||||| || ||||||||||||
Sbjct: 242 gacgacaaggttgaagctaaagttgtncatggncagctttgctccatggtggagaga 186
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                            
Query: 302      agaggccctgtcaaagctgaacaacgttatcagacatccagaagcacaacatgcagataa 361
                |||||| ||||||||| ||||||| ||||||| |||||| |||||| | |||||||| ||
Sbjct: 23204958 agaggcgctgtcaaagttgaacaatgttatcacacatcctgaagcaaagcatgcagacaa 23204899

                                                                            
Query: 362      tattatggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcga 421
                ||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 23204898 tataatggcatatgacaatgctgtttcagcgcttggtaaaatatgccaattccatcgtga 23204839

                                     
Query: 422      tgggattgatgcggctcaggt 442
                ||| || ||||| ||||||||
Sbjct: 23204838 tggtatcgatgcagctcaggt 23204818



 Score =  103 bits (52), Expect = 7e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                            
Query: 439      aggtcattccagcatggcttggctgcttgcctataaaagatgacaagattgaagcaaaag 498
                |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 23203864 aggtcattcctgcctggcttggttgcttgcctataaaagatgacaagattgaagcaaaag 23203805

                                
Query: 499      tcgtgcatgatcagct 514
                | || || ||||||||
Sbjct: 23203804 ttgtacacgatcagct 23203789



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                            
Query: 83       gggaaaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgc 142
                |||||| || ||||| ||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 23205442 gggaaaagataagactgctgaagagagaaggatagctatctgtatatttgatgatattgc 23205383

                                               
Query: 143      agagcaatgtcgtgagtctgctctgaagtat 173
                ||||||||||||||| |||||||| ||||||
Sbjct: 23205382 agagcaatgtcgtgaatctgctctcaagtat 23205352



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 170      gtattatgatacctatgttccttttctgttggaggcatccaatgatgataactcagatgt 229
                |||||||||||| ||  | ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 23205278 gtattatgatacatacctaccttttctgctggaggcatccaatgatgagaactcagatgt 23205219

                        
Query: 230      tcggcagg 237
                ||||||||
Sbjct: 23205218 tcggcagg 23205211



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 9        actttgattaaaacctttaaagcttctttcttgccgttctttgatgagctatctgt 64
                ||||| ||||| ||||| |||||||||||  |||| ||||||||||| || |||||
Sbjct: 23206135 actttaattaagaccttcaaagcttcttttctgccattctttgatgaactgtctgt 23206080
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>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1562_B11
          Length = 112144

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                         
Query: 302   agaggccctgtcaaagctgaacaacgttatcagacatccagaagcacaacatgcagataa 361
             |||||| ||||||||| ||||||| ||||||| |||||| |||||| | |||||||| ||
Sbjct: 67872 agaggcgctgtcaaagttgaacaatgttatcacacatcctgaagcaaagcatgcagacaa 67813

                                                                         
Query: 362   tattatggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcga 421
             ||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 67812 tataatggcatatgacaatgctgtttcagcgcttggtaaaatatgccaattccatcgtga 67753

                                  
Query: 422   tgggattgatgcggctcaggt 442
             ||| || ||||| ||||||||
Sbjct: 67752 tggtatcgatgcagctcaggt 67732



 Score =  103 bits (52), Expect = 7e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                         
Query: 439   aggtcattccagcatggcttggctgcttgcctataaaagatgacaagattgaagcaaaag 498
             |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66778 aggtcattcctgcctggcttggttgcttgcctataaaagatgacaagattgaagcaaaag 66719

                             
Query: 499   tcgtgcatgatcagct 514
             | || || ||||||||
Sbjct: 66718 ttgtacacgatcagct 66703



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                         
Query: 83    gggaaaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgc 142
             |||||| || ||||| ||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 68356 gggaaaagataagactgctgaagagagaaggatagctatctgtatatttgatgatattgc 68297

                                            
Query: 143   agagcaatgtcgtgagtctgctctgaagtat 173
             ||||||||||||||| |||||||| ||||||
Sbjct: 68296 agagcaatgtcgtgaatctgctctcaagtat 68266



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 170   gtattatgatacctatgttccttttctgttggaggcatccaatgatgataactcagatgt 229
             |||||||||||| ||  | ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 68192 gtattatgatacatacctaccttttctgctggaggcatccaatgatgagaactcagatgt 68133

                     
Query: 230   tcggcagg 237
             ||||||||
Sbjct: 68132 tcggcagg 68125



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 9     actttgattaaaacctttaaagcttctttcttgccgttctttgatgagctatctgt 64
             ||||| ||||| ||||| |||||||||||  |||| ||||||||||| || |||||
Sbjct: 69049 actttaattaagaccttcaaagcttcttttctgccattctttgatgaactgtctgt 68994
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1699_E05
          Length = 170666

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                          
Query: 302    agaggccctgtcaaagctgaacaacgttatcagacatccagaagcacaacatgcagataa 361
              |||||| ||||||||| ||||||| ||||||| |||||| |||||| | |||||||| ||
Sbjct: 149142 agaggcgctgtcaaagttgaacaatgttatcacacatcctgaagcaaagcatgcagacaa 149083

                                                                          
Query: 362    tattatggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcga 421
              ||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 149082 tataatggcatatgacaatgctgtttcagcgcttggtaaaatatgccaattccatcgtga 149023

                                   
Query: 422    tgggattgatgcggctcaggt 442
              ||| || ||||| ||||||||
Sbjct: 149022 tggtatcgatgcagctcaggt 149002



 Score =  103 bits (52), Expect = 7e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                          
Query: 439    aggtcattccagcatggcttggctgcttgcctataaaagatgacaagattgaagcaaaag 498
              |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 148048 aggtcattcctgcctggcttggttgcttgcctataaaagatgacaagattgaagcaaaag 147989

                              
Query: 499    tcgtgcatgatcagct 514
              | || || ||||||||
Sbjct: 147988 ttgtacacgatcagct 147973



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                          
Query: 83     gggaaaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgc 142
              |||||| || ||||| ||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 149626 gggaaaagataagactgctgaagagagaaggatagctatctgtatatttgatgatattgc 149567

                                             
Query: 143    agagcaatgtcgtgagtctgctctgaagtat 173
              ||||||||||||||| |||||||| ||||||
Sbjct: 149566 agagcaatgtcgtgaatctgctctcaagtat 149536



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 170    gtattatgatacctatgttccttttctgttggaggcatccaatgatgataactcagatgt 229
              |||||||||||| ||  | ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 149462 gtattatgatacatacctaccttttctgctggaggcatccaatgatgagaactcagatgt 149403

                      
Query: 230    tcggcagg 237
              ||||||||
Sbjct: 149402 tcggcagg 149395



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 9      actttgattaaaacctttaaagcttctttcttgccgttctttgatgagctatctgt 64
              ||||| ||||| ||||| |||||||||||  |||| ||||||||||| || |||||
Sbjct: 150319 actttaattaagaccttcaaagcttcttttctgccattctttgatgaactgtctgt 150264
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>ref|XM_469416.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3801

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 366  atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
            ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 3079 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 3138

                             
Query: 426  attgatgcggctcaggt 442
            ||||||||  |||||||
Sbjct: 3139 attgatgcatctcaggt 3155



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                        
Query: 87   aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
            |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 2800 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 2859

                    
Query: 147  caatgtcg 154
            || |||||
Sbjct: 2860 cactgtcg 2867
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                         
Query: 366   atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
             ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 87884 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 87943

                              
Query: 426   attgatgcggctcaggt 442
             ||||||||  |||||||
Sbjct: 87944 attgatgcatctcaggt 87960



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 87    aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
             |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 87297 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 87356

                     
Query: 147   caatgtcg 154
             || |||||
Sbjct: 87357 cactgtcg 87364
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 366      atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
                ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 27843754 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 27843813

                                 
Query: 426      attgatgcggctcaggt 442
                ||||||||  |||||||
Sbjct: 27843814 attgatgcatctcaggt 27843830



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 87       aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
                |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 27843167 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 27843226

                        
Query: 147      caatgtcg 154
                || |||||
Sbjct: 27843227 cactgtcg 27843234
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 366      atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
                ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 27935078 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 27935137

                                 
Query: 426      attgatgcggctcaggt 442
                ||||||||  |||||||
Sbjct: 27935138 attgatgcatctcaggt 27935154



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 87       aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
                |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 27934491 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 27934550

                        
Query: 147      caatgtcg 154
                || |||||
Sbjct: 27934551 cactgtcg 27934558
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>dbj|AK100005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135O16, full
            insert sequence
          Length = 3799

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 366  atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
            ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 3077 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 3136

                             
Query: 426  attgatgcggctcaggt 442
            ||||||||  |||||||
Sbjct: 3137 attgatgcatctcaggt 3153



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                        
Query: 87   aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
            |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 2798 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 2857

                    
Query: 147  caatgtcg 154
            || |||||
Sbjct: 2858 cactgtcg 2865
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>dbj|AK068293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151J12, full
            insert sequence
          Length = 3797

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 366  atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
            ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 3080 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 3139

                             
Query: 426  attgatgcggctcaggt 442
            ||||||||  |||||||
Sbjct: 3140 attgatgcatctcaggt 3156



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                        
Query: 87   aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
            |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 2801 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 2860

                    
Query: 147  caatgtcg 154
            || |||||
Sbjct: 2861 cactgtcg 2868
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>dbj|AK060273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-G06, full
           insert sequence
          Length = 1560

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 366 atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
           ||||||||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 843 atggcatatgacaatgctgtttctgctcttgggaaaatatgtcagtttcatcgtgatggc 902

                            
Query: 426 attgatgcggctcaggt 442
           ||||||||  |||||||
Sbjct: 903 attgatgcatctcaggt 919



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 87  aaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgcagag 146
           |||||||| ||||  |||||  ||||||| || || ||||||||||| ||  ||||||||
Sbjct: 564 aaggacaaaacagtagaggaacgaaggattgccatatgcatttttgatgatgttgcagag 623

                   
Query: 147 caatgtcg 154
           || |||||
Sbjct: 624 cactgtcg 631
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>ref|NM_121987.2| Arabidopsis thaliana EMB2734; lyase AT5G19820 (EMB2734) mRNA,
            complete cds
          Length = 3922

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 96   acagctgaggagagaaggatagctatctgcatttttgacgacattgcagagcaatgtcgt 155
            ||||| || ||||||||||| ||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 2750 acagcggaagagagaaggattgctatatgcatttttgatgatgtagcagaacaatgccgt 2809

                                                                        
Query: 156  gagtctgctctgaagtattatgatacctatgttccttttctgttggaggcatccaatgat 215
            ||  ||||  | || ||||||||||||||| |||| ||| |  |||| || | |||||| 
Sbjct: 2810 gaagctgcctttaaatattatgatacctatcttccatttgtactggaagcttgcaatgac 2869

                                                                       
Query: 216  gataactcagatgttcggcaggctgctgtttacggcctgggagtatgtgctgagtttgg 274
            || | | |||| ||||| |||||||||||||| || || || || ||||||||||||||
Sbjct: 2870 gagagcccagaggttcgacaggctgctgtttatgggcttggcgtttgtgctgagtttgg 2928



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 366  atggcatatgataatgctgtttcagc 391
            |||||||||||||||||||| |||||
Sbjct: 3020 atggcatatgataatgctgtatcagc 3045



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 487  ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
            ||||||| ||||| || ||||||||||| || ||||||||
Sbjct: 3141 ttgaagccaaagtggttcatgatcagctctgctcaatggt 3180
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>gb|AY051083.1| Arabidopsis thaliana unknown protein (At5g19820) mRNA, complete cds
          Length = 3382

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 96   acagctgaggagagaaggatagctatctgcatttttgacgacattgcagagcaatgtcgt 155
            ||||| || ||||||||||| ||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 2686 acagcggaagagagaaggattgctatatgcatttttgatgatgtagcagaacaatgccgt 2745

                                                                        
Query: 156  gagtctgctctgaagtattatgatacctatgttccttttctgttggaggcatccaatgat 215
            ||  ||||  | || ||||||||||||||| |||| ||| |  |||| || | |||||| 
Sbjct: 2746 gaagctgcctttaaatattatgatacctatcttccatttgtactggaagcttgcaatgac 2805

                                                                       
Query: 216  gataactcagatgttcggcaggctgctgtttacggcctgggagtatgtgctgagtttgg 274
            || | | |||| ||||| |||||||||||||| || || || || ||||||||||||||
Sbjct: 2806 gagagcccagaggttcgacaggctgctgtttatgggcttggcgtttgtgctgagtttgg 2864



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 366  atggcatatgataatgctgtttcagc 391
            |||||||||||||||||||| |||||
Sbjct: 2956 atggcatatgataatgctgtatcagc 2981



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 487  ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
            ||||||| ||||| || ||||||||||| || ||||||||
Sbjct: 3077 ttgaagccaaagtggttcatgatcagctctgctcaatggt 3116
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>gb|AY035044.1| Arabidopsis thaliana unknown protein (At5g19820) mRNA, complete cds
          Length = 3919

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 96   acagctgaggagagaaggatagctatctgcatttttgacgacattgcagagcaatgtcgt 155
            ||||| || ||||||||||| ||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 2735 acagcggaagagagaaggattgctatatgcatttttgatgatgtagcagaacaatgccgt 2794

                                                                        
Query: 156  gagtctgctctgaagtattatgatacctatgttccttttctgttggaggcatccaatgat 215
            ||  ||||  | || ||||||||||||||| |||| ||| |  |||| || | |||||| 
Sbjct: 2795 gaagctgcctttaaatattatgatacctatcttccatttgtactggaagcttgcaatgac 2854

                                                                       
Query: 216  gataactcagatgttcggcaggctgctgtttacggcctgggagtatgtgctgagtttgg 274
            || | | |||| ||||| |||||||||||||| || || || || ||||||||||||||
Sbjct: 2855 gagagcccagaggttcgacaggctgctgtttatgggcttggcgtttgtgctgagtttgg 2913



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 366  atggcatatgataatgctgtttcagc 391
            |||||||||||||||||||| |||||
Sbjct: 3005 atggcatatgataatgctgtatcagc 3030



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 487  ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
            ||||||| ||||| || ||||||||||| || ||||||||
Sbjct: 3126 ttgaagccaaagtggttcatgatcagctctgctcaatggt 3165
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>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
            sequence
          Length = 123655

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 335  acatccagaagcacaacatgcagataatattatggcatatgataatgctgtttcagcact 394
            ||||||| | ||||| ||| | |||||| | |||||||||||||||||||||||||| ||
Sbjct: 4576 acatccaaatgcacagcattctgataatgtaatggcatatgataatgctgtttcagctct 4517

                        
Query: 395  tgggaaaatatg 406
            ||| ||||||||
Sbjct: 4516 tggaaaaatatg 4505
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>gb|AC170580.3| Medicago truncatula chromosome 7 BAC clone mte1-32m6, complete sequence
          Length = 44332

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 335   acatccagaagcacaacatgcagataatattatggcatatgataatgctgtttcagcact 394
             ||||||| | ||||| ||| | |||||| | |||||||||||||||||||||||||| ||
Sbjct: 38725 acatccaaatgcacagcattctgataatgtaatggcatatgataatgctgtttcagctct 38666

                         
Query: 395   tgggaaaatatg 406
             ||| ||||||||
Sbjct: 38665 tggaaaaatatg 38654
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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 366  atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcgcgatggg 425
            ||||| ||||| ||||||||||| || ||||| ||||||||||||||||||| |||| | 
Sbjct: 1991 atggcctatgacaatgctgtttccgctcttggaaaaatatgtcaatttcatcacgatagc 2050

                   
Query: 426  attgatg 432
            |||||||
Sbjct: 2051 attgatg 2057
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>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b,
             complete sequence
          Length = 67552

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 345   gcacaacatgcagataatattatggcatatgataatgctgtttcagcacttgggaaaata 404
             |||| |||| |||||||| | ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 9998  gcactacattcagataatgtaatggcatatgacaatgctgtttcagctcttggaaaaata 10057

               
Query: 405   tg 406
             ||
Sbjct: 10058 tg 10059
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>gb|AC171267.17| Medicago truncatula clone mth2-17i7, complete sequence
          Length = 108819

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                         
Query: 83    gggaaaggacaagacagctgaggagagaaggatagctatctgcatttttgacgacattgc 142
             ||||| |||||||||  |||| ||||||||||| || || ||||||||||| ||  ||||
Sbjct: 59161 gggaagggacaagactcctgaagagagaaggattgcaatttgcatttttgatgatgttgc 59220

                            
Query: 143   agagcaatgtcgtga 157
             |||||| ||||||||
Sbjct: 59221 agagcagtgtcgtga 59235



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 4     tgggaactttgattaaaacctttaaagcttctttcttgccgttctttga 52
             ||||||||||||| |||||||| ||||| || |||||||| ||||||||
Sbjct: 58372 tgggaactttgatcaaaaccttcaaagcatccttcttgcctttctttga 58420



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 170   gtattatgatacctatgttccttttctgttggaggcatccaatgatga 217
             |||||||||||| ||| |||| ||| ||||||||||||  ||||||||
Sbjct: 59345 gtattatgatacgtatcttccatttttgttggaggcatgtaatgatga 59392



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 355   cagataatattatggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttc 414
             |||||||| | ||||||||||| ||||| ||||| || || || ||||| || |||||||
Sbjct: 59704 cagataatgtaatggcatatgacaatgcagtttctgctctgggaaaaatttgccaatttc 59763

              
Query: 415   a 415
             |
Sbjct: 59764 a 59764
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>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13
          Length = 100592

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                         
Query: 171   tattatgatacctatgttccttttctgttggaggcatccaatgatgataactcagatgtt 230
             ||||||||||||||| |||| ||| |  |||| || | |||||| || | | |||| |||
Sbjct: 85809 tattatgatacctatcttccatttgtactggaagcttgcaatgacgagagcccagaggtt 85750

                                                         
Query: 231   cggcaggctgctgtttacggcctgggagtatgtgctgagtttgg 274
             || |||||||||||||| || || || || ||||||||||||||
Sbjct: 85749 cgacaggctgctgtttatgggcttggcgtttgtgctgagtttgg 85706



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 96    acagctgaggagagaaggatagctatctgcatttttga 133
             ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 85971 acagcggaagagagaaggattgctatatgcatttttga 85934



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 366   atggcatatgataatgctgtttcagc 391
             |||||||||||||||||||| |||||
Sbjct: 85529 atggcatatgataatgctgtatcagc 85504



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 487   ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
             ||||||| ||||| || ||||||||||| || ||||||||
Sbjct: 85315 ttgaagccaaagtggttcatgatcagctctgctcaatggt 85276
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>gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete sequence
          Length = 154684

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 567    tatcttcctaaaatagtttctattttt 593
              |||||||||||||||||||||||||||
Sbjct: 144684 tatcttcctaaaatagtttctattttt 144710
to top
>gb|AY106586.1| Zea mays PCO088725 mRNA sequence
          Length = 912

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 366 atggcatatgataatgctgtttcagcacttgggaaaatatgtcaatttcatcg 418
           ||||| ||||| ||||||||||| || ||||| |||||||| | |||||||||
Sbjct: 110 atggcctatgacaatgctgtttctgctcttggaaaaatatgccgatttcatcg 162
to top
>emb|Z68871.2|HSU157D4 Human DNA sequence from clone LL0XNC01-157D4 on chromosome X Contains
             the 3' end of a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 37899

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    tttgatgagctatctgtgtac 68
             |||||||||||||||||||||
Sbjct: 17666 tttgatgagctatctgtgtac 17646
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>emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chromosome 13, complete
            sequence
          Length = 133789

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 567  tatcttcctaaaatagtttct 587
            |||||||||||||||||||||
Sbjct: 1964 tatcttcctaaaatagtttct 1944
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>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a
              peroxisomal biogenesis factor 12 (PEX12) pseudogene,
              complete sequence
          Length = 136943

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 567    tatcttcctaaaatagtttct 587
              |||||||||||||||||||||
Sbjct: 136907 tatcttcctaaaatagtttct 136887
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>gb|AF479897.1| Saccharomyces cerevisiae YGR174W-A gene, complete cds
          Length = 87

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 ttccttttctgttggaggcat 207
           |||||||||||||||||||||
Sbjct: 41  ttccttttctgttggaggcat 61
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>emb|Z72960.1|SCYGR175C S.cerevisiae chromosome VII reading frame ORF YGR175c
          Length = 2314

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 ttccttttctgttggaggcat 207
           |||||||||||||||||||||
Sbjct: 290 ttccttttctgttggaggcat 310
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>emb|Z72959.1|SCYGR174C S.cerevisiae chromosome VII reading frame ORF YGR174c
          Length = 1972

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 187  ttccttttctgttggaggcat 207
            |||||||||||||||||||||
Sbjct: 1735 ttccttttctgttggaggcat 1755
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>gb|M64994.1|YSCERG1A Saccharomyces cerevisiae squalene epoxidase (ERG1) gene, complete cds
          Length = 2311

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 187  ttccttttctgttggaggcat 207
            |||||||||||||||||||||
Sbjct: 2204 ttccttttctgttggaggcat 2184
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>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence
          Length = 187098

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ctgcttgcctataaaagatg 480
              ||||||||||||||||||||
Sbjct: 109149 ctgcttgcctataaaagatg 109130
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>gb|AC150993.4| Bos taurus  BAC CH240-186K21 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 469    ctataaaagatgacaagattgaag 492
              ||||||||||||| ||||||||||
Sbjct: 164462 ctataaaagatgagaagattgaag 164439
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>ref|NM_013811.1| Mus musculus dynein, axonemal, heavy chain 8 (Dnahc8), mRNA
          Length = 14596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7479 ctcagatgttcggcaggctg 7498
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>gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, complete sequence
          Length = 178435

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ctgcttgcctataaaagatg 480
              ||||||||||||||||||||
Sbjct: 157933 ctgcttgcctataaaagatg 157952
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>gb|AF356523.1| Mus musculus haplotype t axonemal dynein heavy chain 8 short form 1
            (Dnahc8) mRNA, complete cds, alternatively spliced
          Length = 13467

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7479 ctcagatgttcggcaggctg 7498
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>gb|AF356522.1| Mus musculus haplotype t axonemal dynein heavy chain 8 long form
            (Dnahc8) mRNA, complete cds, alternatively spliced
          Length = 14596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7479 ctcagatgttcggcaggctg 7498
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>gb|AF356521.1| Mus musculus axonemal dynein heavy chain 8 short form (Dnahc8) mRNA,
            complete cds, alternatively spliced
          Length = 13457

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7469 ctcagatgttcggcaggctg 7488
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>gb|AF356520.1| Mus musculus axonemal dynein heavy chain 8 long form (Dnahc8) mRNA,
            complete cds, alternatively spliced
          Length = 14586

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7469 ctcagatgttcggcaggctg 7488
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>ref|XM_622820.3| PREDICTED: Mus musculus similar to dynein, axonemal, heavy chain 8
            (LOC547338), mRNA
          Length = 10605

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 4841 ctcagatgttcggcaggctg 4860
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>emb|CR940306.3| M.truncatula DNA sequence from clone MTH2-10B11 on chromosome 3,
             complete sequence
          Length = 90977

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 487   ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
             ||||||||||| |  ||||||| ||||| |||||||||||
Sbjct: 30605 ttgaagcaaaaattatgcatgaacagctctgttcaatggt 30566
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>ref|XM_803717.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507925.20) partial mRNA
          Length = 4338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 519  tcaatggtggagagatcggatgca 542
            ||||||||||||||||| ||||||
Sbjct: 1286 tcaatggtggagagatccgatgca 1263
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>ref|XM_805808.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509059.70) partial mRNA
          Length = 4338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 519  tcaatggtggagagatcggatgca 542
            ||||||||||||||||| ||||||
Sbjct: 1286 tcaatggtggagagatccgatgca 1263
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>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence
          Length = 196490

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   ctgcttgcctataaaagatg 480
             ||||||||||||||||||||
Sbjct: 24107 ctgcttgcctataaaagatg 24088
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>gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete sequence
          Length = 133272

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 487  ttgaagcaaaagtcgtgcatgatcagctttgttcaatggt 526
            ||||||||||| |  ||||||| ||||| |||||||||||
Sbjct: 4016 ttgaagcaaaaattatgcatgaacagctctgttcaatggt 4055
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>gb|AF173167.3| Pseudomonas alcaligenes putative transposase, putative transposase,
            gentisate 1,2-dioxygenase (xlnE), xlnF, hypothetical
            protein (xlnG), hypothetical protein (xlnH), xlnI,
            probable 3-hydroxybenzoate 6-hydroxylase (xlnD),
            transposase subunit (tnpA1), transposase subunit (tnpA2),
            transposase subunit, and putative transposase genes,
            complete cds
          Length = 12161

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   attaaaacctttaaagcttc 34
            ||||||||||||||||||||
Sbjct: 7149 attaaaacctttaaagcttc 7130
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>emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 on chromosome 6p22.1-24.3
             Contains part of a novel gene, complete sequence
          Length = 105960

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 583   tttctatttttgctgaggttctgt 606
             ||||||||||| ||||||||||||
Sbjct: 27729 tttctatttttactgaggttctgt 27752
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>emb|Z72728.1|SCYGL206C S.cerevisiae chromosome VII reading frame ORF YGL206c
          Length = 6081

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattaaaacctttaaagctt 33
            ||||||||||||||||||||
Sbjct: 2153 gattaaaacctttaaagctt 2172
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>emb|X52900.1|SCCHC1 Saccharomyces cerevisiae CHC1 gene for clathrin heavy chain
          Length = 5440

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gattaaaacctttaaagctt 33
            ||||||||||||||||||||
Sbjct: 3576 gattaaaacctttaaagctt 3557
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 538    atgcactggttcttggacctcaca 561
              ||||||| ||||||||||||||||
Sbjct: 152977 atgcactagttcttggacctcaca 152954
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 378  aatgctgtttcagcacttgggaaaatat 405
            |||| ||||||||||||| |||||||||
Sbjct: 3321 aatgatgtttcagcactttggaaaatat 3348
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>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 378    aatgctgtttcagcacttgggaaaatat 405
              |||| ||||||||||||| |||||||||
Sbjct: 150847 aatgatgtttcagcactttggaaaatat 150874
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>dbj|AK034789.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430039D06 product:unclassifiable, full insert
            sequence
          Length = 3825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  ctgcttgcctataaaagatg 480
            ||||||||||||||||||||
Sbjct: 2763 ctgcttgcctataaaagatg 2744
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>gb|AF363577.1|AF363577 Mus musculus haplotype t axonemal dynein heavy chain 8 short form 2
            (Dnahc8) mRNA, complete cds, alternatively spliced
          Length = 13317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  ctcagatgttcggcaggctg 240
            ||||||||||||||||||||
Sbjct: 7479 ctcagatgttcggcaggctg 7498
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>gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 from the MHC region,
              complete sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ctgcttgcctataaaagatg 480
              ||||||||||||||||||||
Sbjct: 138012 ctgcttgcctataaaagatg 138031
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>gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain 8 Dnahc8 gene, partial cds
          Length = 150164

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   ctcagatgttcggcaggctg 240
             ||||||||||||||||||||
Sbjct: 72944 ctcagatgttcggcaggctg 72963
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>gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (California Institute of
             Technology BAC Library) complete sequence
          Length = 131105

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    agacagctgaggagagaagg 113
             ||||||||||||||||||||
Sbjct: 55524 agacagctgaggagagaagg 55543
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>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence
          Length = 208338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 350    acatgcagataatattatggcata 373
              |||||||||||||||||| |||||
Sbjct: 129980 acatgcagataatattatagcata 129957
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>gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome 17, complete sequence
          Length = 218275

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ctcagatgttcggcaggctg 240
              ||||||||||||||||||||
Sbjct: 130492 ctcagatgttcggcaggctg 130511
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>gb|DQ332098.1| Synthetic construct Saccharomyces cerevisiae clone FLH148667.01X CHC1
            gene, complete sequence
          Length = 4962

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gattaaaacctttaaagctt 33
            ||||||||||||||||||||
Sbjct: 3276 gattaaaacctttaaagctt 3257
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>emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in linkage group 2,
             complete sequence
          Length = 232604

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ctgaagtattatgataccta 184
             ||||||||||||||||||||
Sbjct: 37053 ctgaagtattatgataccta 37034
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>emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chromosome 17, complete
             sequence
          Length = 192085

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ctgcttgcctataaaagatg 480
             ||||||||||||||||||||
Sbjct: 37858 ctgcttgcctataaaagatg 37877
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>gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosome 14, complete
             sequence
          Length = 154465

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ctgcttgcctataaaagatg 480
             ||||||||||||||||||||
Sbjct: 48734 ctgcttgcctataaaagatg 48753
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>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence
          Length = 177378

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ctcagatgttcggcaggctg 240
              ||||||||||||||||||||
Sbjct: 119682 ctcagatgttcggcaggctg 119663
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>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete
              sequence
          Length = 203030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 592    ttgctgaggttctgtgcaatggaa 615
              ||||||||||||||||||| ||||
Sbjct: 178636 ttgctgaggttctgtgcaagggaa 178659
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>gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3p, complete sequence
          Length = 182288

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    agacagctgaggagagaagg 113
             ||||||||||||||||||||
Sbjct: 29448 agacagctgaggagagaagg 29429
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>gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map 3p, complete sequence
          Length = 217778

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     agacagctgaggagagaagg 113
              ||||||||||||||||||||
Sbjct: 161176 agacagctgaggagagaagg 161157
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>dbj|D88268.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9
          Length = 44553

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    agacagctgaggagagaagg 113
             ||||||||||||||||||||
Sbjct: 14688 agacagctgaggagagaagg 14707
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>dbj|D87008.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9 upstream
             contig
          Length = 30965

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    agacagctgaggagagaagg 113
             ||||||||||||||||||||
Sbjct: 14688 agacagctgaggagagaagg 14707


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,746,479
Number of Sequences: 3902068
Number of extensions: 6746479
Number of successful extensions: 128990
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128708
Number of HSP's gapped (non-prelim): 274
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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