ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16a22 |
|---|---|
| Clone Library Name | barley_pub |
>UGPI5_ARATH (Q9C7F7) Uncharacterized GPI-anchored protein At1g27950 precursor| Length = 193 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLC----QAFQGGQ---D 172 +C+ + CL + +T+ P + CC ++D+ ++ CLC QA GGQ D Sbjct: 34 ECNQDFQKVTLCLDFATGKATI--PSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKD 91 Query: 173 YGVALNMTKALQLPGACKVKTPPFSKC 253 GV K +QLP +C++ + C Sbjct: 92 LGV--QEDKLIQLPTSCQLHNASITNC 116
>NLTP_PYRCO (Q9M5X6) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pyr c 3) Length = 115 Score = 42.4 bits (98), Expect = 0.001 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQGGQDY 175 CS +LA C++YV+ G V +CC+G+K + ++ AC C G Sbjct: 27 CSQVSANLAPCINYVRSGGAV---PPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVS 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A LPG C V P Sbjct: 84 GV--NPGNAESLPGKCGVNVP 102
>NLTP2_ARATH (Q9S7I3) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 118 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVR-------KEVACLCQAFQGGQDY 175 C +LAGC++Y+ G+ + + CC+G+ ++ ++ AC C + Sbjct: 29 CGTVNGNLAGCIAYLTRGAPLT---QGCCNGVTNLKNMASTTPDRQQACRCLQ-SAAKAV 84 Query: 176 GVALNMTKALQLPGACKVKTP 238 G LN +A LP ACKV P Sbjct: 85 GPGLNTARAAGLPSACKVNIP 105
>NLTP_MALDO (Q9M5X7) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Mal d 3) Length = 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQGGQDY 175 C SLA C+ YV+ G V +CC+G++ + ++ AC C G Sbjct: 27 CGQVTSSLAPCIGYVRSGGAV---PPACCNGIRTINGLARTTADRQTACNCLKNLAGSIS 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A LPG C V P Sbjct: 84 GV--NPNNAAGLPGKCGVNVP 102
>NLTP1_PRUAR (P81651) Nonspecific lipid-transfer protein 1 (LTP 1) (Major| allergen Pru ar 3) Length = 91 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVR-------KEVACLCQAFQGGQDY 175 C SLA C+ YV+ G V +CC+G+++V + AC C G Sbjct: 3 CGQVSSSLAPCIGYVRGGGAV---PPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSIS 59 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A LPG C V P Sbjct: 60 GV--NPNNAAALPGKCGVNIP 78
>NLTP4_ORYSA (Q42976) Nonspecific lipid-transfer protein 4 precursor (LTP 4)| Length = 121 Score = 40.4 bits (93), Expect = 0.004 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Frame = +2 Query: 2 SARGDCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQ 160 SA C D S+A CLSYV ++P SCCSG++ + + AC C Sbjct: 27 SAAVSCGDVTSSIAPCLSYVM--GRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNM 84 Query: 161 GGQDYGVALNMTKALQLPGACKV 229 LNM A +P C V Sbjct: 85 ASSFRN--LNMGNAASIPSKCGV 105
>NLTP1_PRUDO (P82534) Nonspecific lipid-transfer protein 1 (LTP 1) (Major| allergen Pru d 3) Length = 91 Score = 40.4 bits (93), Expect = 0.004 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQGGQDY 175 C +LA C++YV+ G V +CC+G+++V + AC C G Sbjct: 3 CGQVSSNLAPCINYVKGGGAV---PPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIP 59 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A LPG C V P Sbjct: 60 GV--NPNNAAALPGKCGVNVP 78
>NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3)| (CW20) (CW-20) (CW-19) Length = 118 Score = 38.9 bits (89), Expect = 0.012 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK-------DVVRKEVACLCQAFQGGQDY 175 C +L+ C+SY + A P +CCSG+K K+ AC C Sbjct: 29 CGQVSSALSPCISYARGNG--AKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIK 86 Query: 176 GVALNMTKALQLPGACKVKTP 238 G+ NM K +PG C V P Sbjct: 87 GI--NMGKVSGVPGKCGVSVP 105
>NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1)| (CW21) (CW-21) Length = 115 Score = 38.9 bits (89), Expect = 0.012 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK-------DVVRKEVACLCQAFQGGQDY 175 C +L+ C+SY + A P +CCSG+K K+ AC C G Sbjct: 29 CGQVSSALSPCISYARGNG--AKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG--- 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 LN KA +P C V P Sbjct: 84 --GLNAGKAAGIPSMCGVSVP 102
>NLTP_PRUAV (Q9M5X8) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pru av 3) Length = 117 Score = 38.9 bits (89), Expect = 0.012 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQGGQDY 175 C +LA C++YV+ G V +CC+G++++ ++ AC C Sbjct: 29 CGQVSSNLAPCIAYVRGGGAV---PPACCNGIRNINNLAKTTADRQTACNCLKQLSASVP 85 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A LPG C V P Sbjct: 86 GV--NANNAAALPGKCGVNVP 104
>NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3)| Length = 115 Score = 38.5 bits (88), Expect = 0.016 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK-------DVVRKEVACLCQAFQGGQDY 175 C +L+ C+SY + A P +CCSG+K K+ AC C G Sbjct: 29 CGQVSSALSPCISYARGNG--AKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG--- 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 LN KA +P C V P Sbjct: 84 --GLNAGKAAGIPSMCGVSVP 102
>NLT42_HORVU (Q43875) Nonspecific lipid-transfer protein 4.2 precursor (LTP 4.2)| (Low-temperature-responsive protein 4.9) Length = 115 Score = 38.5 bits (88), Expect = 0.016 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK-------DVVRKEVACLCQAFQGGQDY 175 C +L+ C+SY + A P +CCSG+K K+ AC C G Sbjct: 29 CGQVSSALSPCISYARGNG--AKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG--- 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 LN KA +P C V P Sbjct: 84 --GLNAGKAAGIPSMCGVSVP 102
>NLTP_HELAN (Q39950) Nonspecific lipid-transfer protein precursor (LTP) (NsLTP)| (SDI-9) Length = 116 Score = 37.7 bits (86), Expect = 0.027 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-------VRKEVACLCQAFQGGQDY 175 C SLA C+SY+ +G V +CCSG+K + ++ AC C Sbjct: 28 CGQVSSSLAPCISYLTKGGAV---PPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSIS 84 Query: 176 GVALNMTKALQLPGACKVKTP 238 GV N A PG C V P Sbjct: 85 GV--NAGNAASFPGKCGVSIP 103
>NLTP5_ARATH (Q9XFS7) Nonspecific lipid-transfer protein 5 precursor (LTP 5)| Length = 118 Score = 37.4 bits (85), Expect = 0.036 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-----VRKEVACLCQAFQGG-QDYG 178 C SL C +Y+ G + CCSG++ + ++ C+ QG + G Sbjct: 29 CGAVTGSLGQCYNYLTRGGFIP---RGCCSGVQRLNSLARTTRDRQQACRCIQGAARALG 85 Query: 179 VALNMTKALQLPGACKVK 232 LN +A +LPGAC+V+ Sbjct: 86 SRLNAGRAARLPGACRVR 103
>NLTP_PINTA (Q41073) Nonspecific lipid-transfer protein precursor (LTP)| Length = 123 Score = 37.4 bits (85), Expect = 0.036 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCC-------SGLKDVVRKEVACLCQAFQGGQDY 175 C+ + ++ C +Y+ ATP +CC S +K ++ C C Q + Y Sbjct: 34 CNQVVSAMTPCATYLI--GNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQA-KSY 90 Query: 176 GVALNMTKALQLPGACKV 229 GV L KA LPG CKV Sbjct: 91 GVKLG--KAANLPGLCKV 106
>NLTP1_HORVU (P07597) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| (Probable amylase/protease inhibitor) Length = 117 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVAC-----LCQAFQGGQDYG 178 +C + CL+YVQ G P CC+G++D+ + + +C +G Sbjct: 28 NCGQVDSKMKPCLTYVQGGPG---PSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI 84 Query: 179 VALNMTKALQLPGACKVKTP 238 LN+ A +P C V P Sbjct: 85 HNLNLNNAASIPSKCNVNVP 104
>MC1_PINRA (O24493) Male-cone protein 1 precursor (PRMC1)| Length = 92 Score = 35.0 bits (79), Expect = 0.18 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQA 154 DCS+A+ LA C S V S P CC LK +C+C++ Sbjct: 27 DCSNAMDKLAPCTSAVGLSSNGVKPSSECCDALKGT---STSCVCKS 70
>M7_LILHE (Q40190) M7 protein precursor (LHM7)| Length = 89 Score = 34.7 bits (78), Expect = 0.23 Identities = 21/46 (45%), Positives = 24/46 (52%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQ 151 +CS A+ L C YV GS A P E CCS LK V CLC+ Sbjct: 27 NCSAAIGELMTCGPYVLPGSNGA-PSEQCCSALKAV---NHGCLCE 68
>NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP| Cw-18) (PKG2316) Length = 115 Score = 34.3 bits (77), Expect = 0.30 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK-------DVVRKEVACLCQAFQGGQDY 175 C +L C +Y + T +P CCSG+K K+ C C G Sbjct: 29 CGQVSSALGPCAAYAKGSGT--SPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAG--- 83 Query: 176 GVALNMTKALQLPGACKVKTP 238 A N +A +P C V P Sbjct: 84 --AYNAGRAAGIPSRCGVSVP 102
>NLTP1_GOSHI (Q42762) Nonspecific lipid-transfer protein precursor (LTP)| Length = 116 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Frame = +2 Query: 35 SLAGCLSYVQEGSTVATPEESCCSGLKDVVR-------KEVACLCQAFQGGQDYGVALNM 193 SLA C++Y++ A P CC+G+K + ++ AC C G+ N Sbjct: 32 SLAPCINYLRGSGAGAVP-PGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGI--NF 88 Query: 194 TKALQLPGACKVKTP 238 A LPG C V P Sbjct: 89 GLASGLPGKCGVNIP 103
>NLTP2_GOSHI (Q43129) Nonspecific lipid-transfer protein precursor (LTP) (GH3)| Length = 120 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Frame = +2 Query: 35 SLAGCLSYVQEGSTVATPEESCCSGLKDVVR-------KEVACLCQAFQGGQDYGVALNM 193 SLA C++Y++ A P CC+G+K + ++ AC C G+ N Sbjct: 36 SLAPCINYLRGSGAGAVP-PGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGI--NF 92 Query: 194 TKALQLPGACKVKTP 238 A LPG C V P Sbjct: 93 GLASGLPGKCGVNIP 107
>NLTPA_RICCO (P10973) Nonspecific lipid-transfer protein A (NS-LTP A)| (Phospholipid transfer protein) (PLTP) Length = 92 Score = 33.9 bits (76), Expect = 0.40 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDV-----VRKEVACLCQAFQGGQDYG 178 DC SLA C+ ++ G VA+P SCC+G++++ + C+ + Sbjct: 2 DCGQVNSSLASCIPFLTGG--VASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARF 59 Query: 179 VALNMTKALQLPGACKV 229 + A LP C V Sbjct: 60 PTIKQDAASSLPKKCGV 76
>MEN8_SILLA (O24356) MEN-8 protein precursor| Length = 100 Score = 33.5 bits (75), Expect = 0.52 Identities = 20/73 (27%), Positives = 29/73 (39%) Frame = +2 Query: 11 GDCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQAFQGGQDYGVALN 190 G C+ L +L C YV G+ P + CC+ L V C+C Sbjct: 36 GGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHD---CMCN------------T 80 Query: 191 MTKALQLPGACKV 229 + A QLP +C + Sbjct: 81 LRVASQLPSSCNL 93
>RUNX1_MOUSE (Q03347) Runt-related transcription factor 1 (Core-binding factor,| alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL Length = 451 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = +1 Query: 193 DQGPAAARRLQGQDASLQQVPHFHPGYDWRVSSACPIFRCSVL 321 D GPA A +L+ D S+ +V HPG R S P F CSVL Sbjct: 35 DGGPALASKLRSGDRSMVEVLADHPGELVRTDS--PNFLCSVL 75
>LIM2_LILLO (Q43534) LIM2 protein precursor| Length = 90 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQ 151 +CS A+ L C YV G+ A P E CCS L+ V CLC+ Sbjct: 28 NCSAAIGELMTCGPYVLPGNNGA-PSEQCCSALRAV---NHGCLCE 69
>LIM1_LILLO (Q43533) LIM1 protein precursor| Length = 90 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQ 151 +CS A+ L C YV G+ A P E CCS L+ V CLC+ Sbjct: 28 NCSAAIGELMTCGPYVLPGNNGA-PSEQCCSALRAV---NHGCLCE 69
>NLTP1_WHEAT (P24296) Nonspecific lipid-transfer protein precursor (LTP)| (Phospholipid transfer protein) (PLTP) (ns-LTP1) (Fragment) Length = 113 Score = 31.6 bits (70), Expect = 2.0 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVR-------KEVACLCQAFQGGQD 172 DC + CLSYVQ G P CC G+K++ ++ AC C G Sbjct: 25 DCGHVDSLVRPCLSYVQGG---PGPSGQCCDGVKNLHNQARSQSDRQSACNCLK---GIA 78 Query: 173 YGV-ALNMTKALQLPGACKVKTP 238 G+ LN A +P C V P Sbjct: 79 RGIHNLNEDNARSIPPKCGVNLP 101
>NLTP_ARTVU (P0C088) Nonspecific lipid-transfer protein (LTP) (Pollen allergen| Art v 3) (Fragment) Length = 37 Score = 30.8 bits (68), Expect = 3.4 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLK 115 CSD ++ CLSY+++G V CC+G+K Sbjct: 4 CSDVSNKISPCLSYLKQGGEVPA---DCCAGVK 33
>NLTP_PINPI (P26912) Probable nonspecific lipid-transfer protein (LTP) (Basic| protein) (PBP) (Fragment) Length = 36 Score = 29.6 bits (65), Expect = 7.5 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 14 DCSDALISLAGCLSYVQEGSTVATPEESCCSGL 112 DC+ L GC+ Y+ G+ TP+ CC G+ Sbjct: 3 DCNTVKSDLVGCVGYLPSGTGNPTPQ--CCDGV 33
>A9_BRANA (Q05772) Tapetum-specific protein A9 precursor| Length = 96 Score = 29.3 bits (64), Expect = 9.8 Identities = 14/59 (23%), Positives = 24/59 (40%) Frame = +2 Query: 17 CSDALISLAGCLSYVQEGSTVATPEESCCSGLKDVVRKEVACLCQAFQGGQDYGVALNM 193 C D L ++ C V G+ P +CC L+ + C+C A + + N+ Sbjct: 32 CLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKD---CICNALRAATTFTTTCNL 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,035,352 Number of Sequences: 219361 Number of extensions: 1033996 Number of successful extensions: 3029 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2927 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3027 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
