| Clone Name | bags15l20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 496 bits (250), Expect = e-137 Identities = 496/578 (85%) Strand = Plus / Minus Query: 2 gttggaggaagcaaagtggtccattttacacgaaagaaggaagttgaatcttcagattca 61 ||||||||||| |||||||| |||||||| |||||||| |||| ||| ||||||||| Sbjct: 20305581 gttggaggaagtaaagtggttcattttactcgaaagaaagaagcagaaggatcagattca 20305522 Query: 62 tcaaactccatctctggcctgatctcacgggcttcatcagagtgcccaacattcccagac 121 || || |||| ||| |||| | | | | ||||||||||||||||||| |||||||| Sbjct: 20305521 tccaattccacctccagcctattattagagccttcatcagagtgcccaacgttcccagat 20305462 Query: 122 tgtggttttcagctggacgatagtggtgtcgtactcacctgcttggattgcttccttggc 181 ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | Sbjct: 20305461 tgtgggtttcagctgcctgatagtggtgtcgtcctcacctgcttggattgcttccttcgg 20305402 Query: 182 aatggctccctctactgctttgagtatggagtgccaccagcaattttccttgcaaaattt 241 |||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | Sbjct: 20305401 aatggctctctatactgcttcgagtacggagtgccatcagccgttttccttgcaaagctg 20305342 Query: 242 cgtgggggaacctgcaccattgcccaatccgacccatcagaggctgtggttcggagagct 301 ||||||||||||||||||||||||||||| || |||||||| | |||||| | ||||| Sbjct: 20305341 cgtgggggaacctgcaccattgcccaatcagatccatcagaagttgtggtacacagagcc 20305282 Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 ||| |||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 20305281 atgtacttacttcaaaatggctttggaaattatgacatatttgagaacaattgcgaggac 20305222 Query: 362 tttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtgagc 421 ||||||||||||||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 20305221 tttgcactctactgcaaaactgggcttcttcctgttgaggaacctggcattggaacaagt 20305162 Query: 422 gggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattcaag 481 ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||| Sbjct: 20305161 gggcaagcatcttccgccattggagtgccattggcagctcttctgtccactccacttaag 20305102 Query: 482 attttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgccggt 541 |||| ||||| ||||| || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 20305101 ctttttgctgctggtccacttggaatggccactgtcacagctgggatgtactgtgctggt 20305042 Query: 542 agatacatcaccgacataggagtaagaaaggatgtggc 579 ||||||||||| |||||||||||||||||||||||||| Sbjct: 20305041 agatacatcactgacataggagtaagaaaggatgtggc 20305004
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 496 bits (250), Expect = e-137 Identities = 496/578 (85%) Strand = Plus / Minus Query: 2 gttggaggaagcaaagtggtccattttacacgaaagaaggaagttgaatcttcagattca 61 ||||||||||| |||||||| |||||||| |||||||| |||| ||| ||||||||| Sbjct: 84708 gttggaggaagtaaagtggttcattttactcgaaagaaagaagcagaaggatcagattca 84649 Query: 62 tcaaactccatctctggcctgatctcacgggcttcatcagagtgcccaacattcccagac 121 || || |||| ||| |||| | | | | ||||||||||||||||||| |||||||| Sbjct: 84648 tccaattccacctccagcctattattagagccttcatcagagtgcccaacgttcccagat 84589 Query: 122 tgtggttttcagctggacgatagtggtgtcgtactcacctgcttggattgcttccttggc 181 ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | Sbjct: 84588 tgtgggtttcagctgcctgatagtggtgtcgtcctcacctgcttggattgcttccttcgg 84529 Query: 182 aatggctccctctactgctttgagtatggagtgccaccagcaattttccttgcaaaattt 241 |||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | Sbjct: 84528 aatggctctctatactgcttcgagtacggagtgccatcagccgttttccttgcaaagctg 84469 Query: 242 cgtgggggaacctgcaccattgcccaatccgacccatcagaggctgtggttcggagagct 301 ||||||||||||||||||||||||||||| || |||||||| | |||||| | ||||| Sbjct: 84468 cgtgggggaacctgcaccattgcccaatcagatccatcagaagttgtggtacacagagcc 84409 Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 ||| |||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 84408 atgtacttacttcaaaatggctttggaaattatgacatatttgagaacaattgcgaggac 84349 Query: 362 tttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtgagc 421 ||||||||||||||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 84348 tttgcactctactgcaaaactgggcttcttcctgttgaggaacctggcattggaacaagt 84289 Query: 422 gggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattcaag 481 ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||| Sbjct: 84288 gggcaagcatcttccgccattggagtgccattggcagctcttctgtccactccacttaag 84229 Query: 482 attttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgccggt 541 |||| ||||| ||||| || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 84228 ctttttgctgctggtccacttggaatggccactgtcacagctgggatgtactgtgctggt 84169 Query: 542 agatacatcaccgacataggagtaagaaaggatgtggc 579 ||||||||||| |||||||||||||||||||||||||| Sbjct: 84168 agatacatcactgacataggagtaagaaaggatgtggc 84131
>dbj|AK105121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-B12, full insert sequence Length = 1099 Score = 496 bits (250), Expect = e-137 Identities = 496/578 (85%) Strand = Plus / Plus Query: 2 gttggaggaagcaaagtggtccattttacacgaaagaaggaagttgaatcttcagattca 61 ||||||||||| |||||||| |||||||| |||||||| |||| ||| ||||||||| Sbjct: 185 gttggaggaagtaaagtggttcattttactcgaaagaaagaagcagaaggatcagattca 244 Query: 62 tcaaactccatctctggcctgatctcacgggcttcatcagagtgcccaacattcccagac 121 || || |||| ||| |||| | | | | ||||||||||||||||||| |||||||| Sbjct: 245 tccaattccacctccagcctattattagagccttcatcagagtgcccaacgttcccagat 304 Query: 122 tgtggttttcagctggacgatagtggtgtcgtactcacctgcttggattgcttccttggc 181 ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | Sbjct: 305 tgtgggtttcagctgcctgatagtggtgtcgtcctcacctgcttggattgcttccttcgg 364 Query: 182 aatggctccctctactgctttgagtatggagtgccaccagcaattttccttgcaaaattt 241 |||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | Sbjct: 365 aatggctctctatactgcttcgagtacggagtgccatcagccgttttccttgcaaagctg 424 Query: 242 cgtgggggaacctgcaccattgcccaatccgacccatcagaggctgtggttcggagagct 301 ||||||||||||||||||||||||||||| || |||||||| | |||||| | ||||| Sbjct: 425 cgtgggggaacctgcaccattgcccaatcagatccatcagaagttgtggtacacagagcc 484 Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 ||| |||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 485 atgtacttacttcaaaatggctttggaaattatgacatatttgagaacaattgcgaggac 544 Query: 362 tttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtgagc 421 ||||||||||||||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 545 tttgcactctactgcaaaactgggcttcttcctgttgaggaacctggcattggaacaagt 604 Query: 422 gggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattcaag 481 ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||| Sbjct: 605 gggcaagcatcttccgccattggagtgccattggcagctcttctgtccactccacttaag 664 Query: 482 attttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgccggt 541 |||| ||||| ||||| || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 665 ctttttgctgctggtccacttggaatggccactgtcacagctgggatgtactgtgctggt 724 Query: 542 agatacatcaccgacataggagtaagaaaggatgtggc 579 ||||||||||| |||||||||||||||||||||||||| Sbjct: 725 agatacatcactgacataggagtaagaaaggatgtggc 762
>dbj|AK072174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135P13, full insert sequence Length = 3195 Score = 496 bits (250), Expect = e-137 Identities = 496/578 (85%) Strand = Plus / Plus Query: 2 gttggaggaagcaaagtggtccattttacacgaaagaaggaagttgaatcttcagattca 61 ||||||||||| |||||||| |||||||| |||||||| |||| ||| ||||||||| Sbjct: 2091 gttggaggaagtaaagtggttcattttactcgaaagaaagaagcagaaggatcagattca 2150 Query: 62 tcaaactccatctctggcctgatctcacgggcttcatcagagtgcccaacattcccagac 121 || || |||| ||| |||| | | | | ||||||||||||||||||| |||||||| Sbjct: 2151 tccaattccacctccagcctattattagagccttcatcagagtgcccaacgttcccagat 2210 Query: 122 tgtggttttcagctggacgatagtggtgtcgtactcacctgcttggattgcttccttggc 181 ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | Sbjct: 2211 tgtgggtttcagctgcctgatagtggtgtcgtcctcacctgcttggattgcttccttcgg 2270 Query: 182 aatggctccctctactgctttgagtatggagtgccaccagcaattttccttgcaaaattt 241 |||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | Sbjct: 2271 aatggctctctatactgcttcgagtacggagtgccatcagccgttttccttgcaaagctg 2330 Query: 242 cgtgggggaacctgcaccattgcccaatccgacccatcagaggctgtggttcggagagct 301 ||||||||||||||||||||||||||||| || |||||||| | |||||| | ||||| Sbjct: 2331 cgtgggggaacctgcaccattgcccaatcagatccatcagaagttgtggtacacagagcc 2390 Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 ||| |||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 2391 atgtacttacttcaaaatggctttggaaattatgacatatttgagaacaattgcgaggac 2450 Query: 362 tttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtgagc 421 ||||||||||||||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 2451 tttgcactctactgcaaaactgggcttcttcctgttgaggaacctggcattggaacaagt 2510 Query: 422 gggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattcaag 481 ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||| Sbjct: 2511 gggcaagcatcttccgccattggagtgccattggcagctcttctgtccactccacttaag 2570 Query: 482 attttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgccggt 541 |||| ||||| ||||| || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 2571 ctttttgctgctggtccacttggaatggccactgtcacagctgggatgtactgtgctggt 2630 Query: 542 agatacatcaccgacataggagtaagaaaggatgtggc 579 ||||||||||| |||||||||||||||||||||||||| Sbjct: 2631 agatacatcactgacataggagtaagaaaggatgtggc 2668
>dbj|AK060048.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H07, full insert sequence Length = 1044 Score = 496 bits (250), Expect = e-137 Identities = 496/578 (85%) Strand = Plus / Plus Query: 2 gttggaggaagcaaagtggtccattttacacgaaagaaggaagttgaatcttcagattca 61 ||||||||||| |||||||| |||||||| |||||||| |||| ||| ||||||||| Sbjct: 181 gttggaggaagtaaagtggttcattttactcgaaagaaagaagcagaaggatcagattca 240 Query: 62 tcaaactccatctctggcctgatctcacgggcttcatcagagtgcccaacattcccagac 121 || || |||| ||| |||| | | | | ||||||||||||||||||| |||||||| Sbjct: 241 tccaattccacctccagcctattattagagccttcatcagagtgcccaacgttcccagat 300 Query: 122 tgtggttttcagctggacgatagtggtgtcgtactcacctgcttggattgcttccttggc 181 ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | Sbjct: 301 tgtgggtttcagctgcctgatagtggtgtcgtcctcacctgcttggattgcttccttcgg 360 Query: 182 aatggctccctctactgctttgagtatggagtgccaccagcaattttccttgcaaaattt 241 |||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| | Sbjct: 361 aatggctctctatactgcttcgagtacggagtgccatcagccgttttccttgcaaagctg 420 Query: 242 cgtgggggaacctgcaccattgcccaatccgacccatcagaggctgtggttcggagagct 301 ||||||||||||||||||||||||||||| || |||||||| | |||||| | ||||| Sbjct: 421 cgtgggggaacctgcaccattgcccaatcagatccatcagaagttgtggtacacagagcc 480 Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 ||| |||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 481 atgtacttacttcaaaatggctttggaaattatgacatatttgagaacaattgcgaggac 540 Query: 362 tttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtgagc 421 ||||||||||||||||| ||||| ||| | ||||| || ||||| |||||||| || Sbjct: 541 tttgcactctactgcaaaactgggcttcttcctgttgaggaacctggcattggaacaagt 600 Query: 422 gggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattcaag 481 ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | ||| Sbjct: 601 gggcaagcatcttccgccattggagtgccattggcagctcttctgtccactccacttaag 660 Query: 482 attttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgccggt 541 |||| ||||| ||||| || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 661 ctttttgctgctggtccacttggaatggccactgtcacagctgggatgtactgtgctggt 720 Query: 542 agatacatcaccgacataggagtaagaaaggatgtggc 579 ||||||||||| |||||||||||||||||||||||||| Sbjct: 721 agatacatcactgacataggagtaagaaaggatgtggc 758
>gb|AY110920.1| Zea mays CL34388_1 mRNA sequence Length = 598 Score = 178 bits (90), Expect = 2e-41 Identities = 219/262 (83%) Strand = Plus / Plus Query: 359 gactttgcactctactgcaagactggacttgtacctgtggatgaaccaggcattggggtg 418 ||||| |||||||||||||||||||| ||| ||||||| || || || ||||||||| Sbjct: 7 gacttcgcactctactgcaagactgggcttctacctgttgaggagcctggcattgggact 66 Query: 419 agcgggcaagcatcttccgccattggcgtgccactggcagctcttctgtccaccccattc 478 || |||||||| ||||| || ||||| ||||| ||||||||||||||||||| || ||| Sbjct: 67 agtgggcaagcttcttctgctattggtgtgccgttggcagctcttctgtccactccgttc 126 Query: 479 aagattttcgctgccggtccgctgggaatggccaccgtcacagccgggatgtactgtgcc 538 ||| || | ||||| |||||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 127 aagcttctggctgctggtccgcttggaatggccactgtcacggctgggatgtactgtgct 186 Query: 539 ggtagatacatcaccgacataggagtaagaaaggatgtggccaaagtggaggtggaaaac 598 || |||||||| || |||||||||||||| ||||| || || ||||| || ||||| || Sbjct: 187 ggcagatacattactgacataggagtaaggaaggacgtagcaaaagttgaagtggagaaa 246 Query: 599 ctgccatcgcacctcggtttcc 620 | ||||||||| |||||||| Sbjct: 247 ttatcatcgcaccccggtttcc 268
>ref|XM_483638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 506 atggccaccgtcacagccgggatgtactgtgccggtagatacatcaccgacataggagta 565 |||||| ||||||| |||||||||||||| ||||| || |||||||||||||| || || Sbjct: 664 atggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtg 723 Query: 566 agaaaggatgtggccaaagtggaggtggaaaacctg 601 || ||||| || | ||| ||||||||||| |||||| Sbjct: 724 aggaaggacgtcgtcaaggtggaggtggagaacctg 759 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 |||||| |||| || || ||||| |||| ||||||| | |||||||| || ||||||||| Sbjct: 457 atgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggac 516 Query: 362 tttgcactctactgcaagac 381 || || |||||||||||||| Sbjct: 517 ttcgcgctctactgcaagac 536
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 506 atggccaccgtcacagccgggatgtactgtgccggtagatacatcaccgacataggagta 565 |||||| ||||||| |||||||||||||| ||||| || |||||||||||||| || || Sbjct: 27386525 atggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtg 27386466 Query: 566 agaaaggatgtggccaaagtggaggtggaaaacctg 601 || ||||| || | ||| ||||||||||| |||||| Sbjct: 27386465 aggaaggacgtcgtcaaggtggaggtggagaacctg 27386430 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 |||||| |||| || || ||||| |||| ||||||| | |||||||| || ||||||||| Sbjct: 27386732 atgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggac 27386673 Query: 362 tttgcactctactgcaagac 381 || || |||||||||||||| Sbjct: 27386672 ttcgcgctctactgcaagac 27386653
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 506 atggccaccgtcacagccgggatgtactgtgccggtagatacatcaccgacataggagta 565 |||||| ||||||| |||||||||||||| ||||| || |||||||||||||| || || Sbjct: 13320 atggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtg 13261 Query: 566 agaaaggatgtggccaaagtggaggtggaaaacctg 601 || ||||| || | ||| ||||||||||| |||||| Sbjct: 13260 aggaaggacgtcgtcaaggtggaggtggagaacctg 13225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 |||||| |||| || || ||||| |||| ||||||| | |||||||| || ||||||||| Sbjct: 13527 atgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggac 13468 Query: 362 tttgcactctactgcaagac 381 || || |||||||||||||| Sbjct: 13467 ttcgcgctctactgcaagac 13448
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 506 atggccaccgtcacagccgggatgtactgtgccggtagatacatcaccgacataggagta 565 |||||| ||||||| |||||||||||||| ||||| || |||||||||||||| || || Sbjct: 88052 atggccgccgtcaccgccgggatgtactgcgccggcaggtacatcaccgacatcggggtg 87993 Query: 566 agaaaggatgtggccaaagtggaggtggaaaacctg 601 || ||||| || | ||| ||||||||||| |||||| Sbjct: 87992 aggaaggacgtcgtcaaggtggaggtggagaacctg 87957 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 302 atgcacttgcttcaaaatgggtttggcaactacgacatattcgagaagaattgcgaggac 361 |||||| |||| || || ||||| |||| ||||||| | |||||||| || ||||||||| Sbjct: 88259 atgcacctgctccagaacgggttcggcagctacgacgtgttcgagaacaactgcgaggac 88200 Query: 362 tttgcactctactgcaagac 381 || || |||||||||||||| Sbjct: 88199 ttcgcgctctactgcaagac 88180
>ref|NM_100005.2| Arabidopsis thaliana unknown protein AT1G01225 mRNA, complete cds Length = 1025 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 314 caaaatgggtttggcaactacgacatattcgagaagaattgcgaggactttgcactctac 373 ||||| || ||||||||||||||||| ||| |||| || || ||||| || || ||||| Sbjct: 483 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 542 Query: 374 tgcaagac 381 |||||||| Sbjct: 543 tgcaagac 550
>gb|BT024776.1| Arabidopsis thaliana At1g01225 mRNA, complete cds Length = 783 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 314 caaaatgggtttggcaactacgacatattcgagaagaattgcgaggactttgcactctac 373 ||||| || ||||||||||||||||| ||| |||| || || ||||| || || ||||| Sbjct: 406 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 465 Query: 374 tgcaagac 381 |||||||| Sbjct: 466 tgcaagac 473
>emb|BX818287.1|CNS0AAMT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1021 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 314 caaaatgggtttggcaactacgacatattcgagaagaattgcgaggactttgcactctac 373 ||||| || ||||||||||||||||| ||| |||| || || ||||| || || ||||| Sbjct: 483 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 542 Query: 374 tgcaagac 381 |||||||| Sbjct: 543 tgcaagac 550
>gb|AY087072.1| Arabidopsis thaliana clone 31323 mRNA, complete sequence Length = 982 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 314 caaaatgggtttggcaactacgacatattcgagaagaattgcgaggactttgcactctac 373 ||||| || ||||||||||||||||| ||| |||| || || ||||| || || ||||| Sbjct: 450 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 509 Query: 374 tgcaagac 381 |||||||| Sbjct: 510 tgcaagac 517
>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete sequence Length = 104001 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 314 caaaatgggtttggcaactacgacatattcgagaagaattgcgaggactttgcactctac 373 ||||| || ||||||||||||||||| ||| |||| || || ||||| || || ||||| Sbjct: 37773 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 37832 Query: 374 tgcaagac 381 |||||||| Sbjct: 37833 tgcaagac 37840
>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence Length = 94633 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aatcttcagattcatcaaactc 69 |||||||||||||||||||||| Sbjct: 602 aatcttcagattcatcaaactc 623
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 345 agaagaattgcgaggactttgcactctactgcaagac 381 |||| ||||||||||||||||| | ||||||||||| Sbjct: 113060 agaacaattgcgaggactttgcgatatactgcaagac 113024
>ref|XM_445830.1| Candida glabrata CBS138, CAGL0E03245g partial mRNA Length = 1278 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 aagaaggaagttgaatcttca 55 ||||||||||||||||||||| Sbjct: 52 aagaaggaagttgaatcttca 72
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aagaaggaagttgaatcttca 55 ||||||||||||||||||||| Sbjct: 300462 aagaaggaagttgaatcttca 300442
>gb|AC010947.6| Homo sapiens chromosome 18, clone RP11-25L3, complete sequence Length = 185470 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 ctggcagctcttctgtccacc 472 ||||||||||||||||||||| Sbjct: 166587 ctggcagctcttctgtccacc 166607
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 345 agaagaattgcgaggactttgcactctactgcaagac 381 |||| ||||||||||||||||| | ||||||||||| Sbjct: 14032983 agaacaattgcgaggactttgcgatatactgcaagac 14032947
>gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, complete sequence Length = 202383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 gcaattttccttgcaaaattt 241 ||||||||||||||||||||| Sbjct: 114732 gcaattttccttgcaaaattt 114752
>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full insert sequence Length = 3464 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 345 agaagaattgcgaggactttgcactctactgcaagac 381 |||| ||||||||||||||||| | ||||||||||| Sbjct: 2617 agaacaattgcgaggactttgcgatatactgcaagac 2581
>ref|XM_415555.1| PREDICTED: Gallus gallus similar to NADPH oxidase activator 1 (LOC417282), mRNA Length = 2337 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 cacgaaagaaggaagttgaa 49 |||||||||||||||||||| Sbjct: 506 cacgaaagaaggaagttgaa 525
>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete sequence Length = 209755 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 actggacttgtacctgtgga 399 |||||||||||||||||||| Sbjct: 201594 actggacttgtacctgtgga 201613
>gb|AY596539.1| Saccharum officinarum clone SCCCLR2C03C11, complete sequence Length = 1456 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 353 tgcgaggactttgcactctactgcaagactgg 384 |||||||||||||| | |||||||||||||| Sbjct: 747 tgcgaggactttgccatatactgcaagactgg 778
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence Length = 164620 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 agactggacttgtacctgtggatg 401 ||||||| |||||||||||||||| Sbjct: 7666 agactggccttgtacctgtggatg 7689
>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence Length = 207188 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 actgcaagactggacttgta 391 |||||||||||||||||||| Sbjct: 20306 actgcaagactggacttgta 20325
>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence Length = 197978 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tgtacctgtggatgaaccag 407 |||||||||||||||||||| Sbjct: 38082 tgtacctgtggatgaaccag 38101
>gb|AC122323.3| Mus musculus BAC clone RP23-326N21 from chromosome 8, complete sequence Length = 212949 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 cagctcttctgtccacccca 475 |||||||||||||||||||| Sbjct: 94042 cagctcttctgtccacccca 94023
>emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to 4214630 Length = 203901 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cagcaattttccttgcaaaa 238 |||||||||||||||||||| Sbjct: 158675 cagcaattttccttgcaaaa 158656
>gb|AC156549.8| Mus musculus chromosome 1, clone RP24-104O22, complete sequence Length = 164489 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 actgcaagactggacttgta 391 |||||||||||||||||||| Sbjct: 32378 actgcaagactggacttgta 32359
>emb|AJ271400.1|SAU271400 Staphylococcus aureus partial arcC gene for carbamate kinase, allele 14 Length = 456 Score = 40.1 bits (20), Expect = 9.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 18 tggtccattttacacgaaagaaggaagttgaa 49 |||||| ||||||||||||||| ||||||||| Sbjct: 219 tggtcctttttacacgaaagaa-gaagttgaa 249
>gb|AC062004.5| Homo sapiens chromosome 8, clone RP11-325O20, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 caaactccatctctggcctg 82 |||||||||||||||||||| Sbjct: 5353 caaactccatctctggcctg 5334
>emb|BX571981.5| Zebrafish DNA sequence from clone DKEY-31J3 in linkage group 14, complete sequence Length = 258091 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ttcccagactgtggttttca 132 |||||||||||||||||||| Sbjct: 220504 ttcccagactgtggttttca 220523
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccttggcaatggctccctct 194 |||||||||||||||||||| Sbjct: 1587001 ccttggcaatggctccctct 1586982
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 ggatgtggccaaagtggagg 590 |||||||||||||||||||| Sbjct: 9680 ggatgtggccaaagtggagg 9699
>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone BACR35F01, complete sequence Length = 170869 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ggatgtggccaaagtggagg 590 |||||||||||||||||||| Sbjct: 24005 ggatgtggccaaagtggagg 23986
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ggatgtggccaaagtggagg 590 |||||||||||||||||||| Sbjct: 64324 ggatgtggccaaagtggagg 64305
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 496 tccgctgggaatggccaccgtcac 519 |||||||||||||||||| ||||| Sbjct: 7729594 tccgctgggaatggccacggtcac 7729571
>emb|Z72503.1|CEC26C6 Caenorhabditis elegans Cosmid C26C6, complete sequence Length = 42472 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 caattttccttgcaaaattt 241 |||||||||||||||||||| Sbjct: 11179 caattttccttgcaaaattt 11198
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 agactggacttgtacctgtggatg 401 ||||||| |||||||||||||||| Sbjct: 25656 agactggccttgtacctgtggatg 25679
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ggatgtggccaaagtggagg 590 |||||||||||||||||||| Sbjct: 142497 ggatgtggccaaagtggagg 142478
>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence Length = 217538 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tgtacctgtggatgaaccag 407 |||||||||||||||||||| Sbjct: 159008 tgtacctgtggatgaaccag 159027
>emb|X91430.1|BSPX91430 Uncultured bacterium partial 16S rRNA gene (clone group A7hq) Length = 855 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcatcagagtgcccaacatt 114 |||||||||||||||||||| Sbjct: 619 tcatcagagtgcccaacatt 600
>gb|AC119202.6| Mus musculus chromosome 8, clone RP24-185N3, complete sequence Length = 159765 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agtgccaccagcaattttcc 230 |||||||||||||||||||| Sbjct: 47591 agtgccaccagcaattttcc 47572
>dbj|AB026830.1| Ephydatia fluviatilis mRNA for sALK-7, complete cds Length = 1753 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ctccatctctggcctgatctcacg 90 ||||| |||||||||||||||||| Sbjct: 1442 ctccagctctggcctgatctcacg 1419
>dbj|D26185.1|BAC180K B. subtilis DNA, 180 kilobase region of replication origin Length = 180136 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cagcaattttccttgcaaaa 238 |||||||||||||||||||| Sbjct: 18376 cagcaattttccttgcaaaa 18357 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,165,436 Number of Sequences: 3902068 Number of extensions: 5165436 Number of successful extensions: 94176 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 93984 Number of HSP's gapped (non-prelim): 188 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)