ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16a07 |
|---|---|
| Clone Library Name | barley_pub |
>RL14_PEA (P55844) Probable 60 ribosomal protein L14 (Hydroxyproline-rich| glycoprotein HRGP1) Length = 133 Score = 185 bits (470), Expect = 3e-47 Identities = 94/129 (72%), Positives = 103/129 (79%) Frame = +2 Query: 29 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTXXXX 208 MPFKRFVEIGRVAL+NYGKDYGRLVVIVDV+DQ RALVDAPDM R +NFKRLSLT Sbjct: 1 MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60 Query: 209 XXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 388 LIKA+E ADVK KW SSWG+KLIV+K RA+LNDFDRFK+MLAKIKR Sbjct: 61 DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120 Query: 389 IRQELAKLK 415 +RQELAKLK Sbjct: 121 VRQELAKLK 129
>RL14_LUMRU (O46160) 60S ribosomal protein L14| Length = 152 Score = 114 bits (285), Expect = 9e-26 Identities = 62/131 (47%), Positives = 79/131 (60%), Gaps = 2/131 (1%) Frame = +2 Query: 29 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXX 202 M F+RFVEIGRVA YG D G+LV IVDV+DQNRALVD P + R MNFK L LT Sbjct: 1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60 Query: 203 XXXXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 382 + KA E+ ++ KWE S KK+ +++R +L DF+RFK+M AK R Sbjct: 61 KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120 Query: 383 GAIRQELAKLK 415 I+ E KL+ Sbjct: 121 RLIKIEFGKLR 131
>RL14_RAT (Q63507) 60S ribosomal protein L14| Length = 213 Score = 112 bits (280), Expect = 3e-25 Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 2/129 (1%) Frame = +2 Query: 35 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXXXX 208 F+RFVE+GRVA +++G G+LV IVDV+DQNRALVD P + R M FK + LT Sbjct: 2 FRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFIL 61 Query: 209 XXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 388 + KA E+AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R Sbjct: 62 KFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRI 121 Query: 389 IRQELAKLK 415 I+ E+ KL+ Sbjct: 122 IKTEVKKLQ 130
>RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7)| Length = 212 Score = 111 bits (277), Expect = 8e-25 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 2/129 (1%) Frame = +2 Query: 35 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXXXX 208 F+RFVE+GRVA V++G G+LV IVDV+DQNRALVD P + R M FK + LT Sbjct: 2 FRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFIL 61 Query: 209 XXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 388 + +A ++AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R Sbjct: 62 KFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRI 121 Query: 389 IRQELAKLK 415 I+ E+ KL+ Sbjct: 122 IKNEVKKLQ 130
>RL14_MOUSE (Q9CR57) 60S ribosomal protein L14| Length = 216 Score = 111 bits (277), Expect = 8e-25 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 2/129 (1%) Frame = +2 Query: 35 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXXXX 208 F+R+VE+GRVA +++G G+LV IVDV+DQNRALVD P + R M FK + LT Sbjct: 2 FRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFIL 61 Query: 209 XXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 388 + KA E+AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R Sbjct: 62 KFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRI 121 Query: 389 IRQELAKLK 415 I+ E+ KL+ Sbjct: 122 IKTEVKKLQ 130
>RL14_GRIJA (Q7XYA7) 60S ribosomal protein L14| Length = 133 Score = 110 bits (274), Expect = 2e-24 Identities = 63/132 (47%), Positives = 85/132 (64%), Gaps = 3/132 (2%) Frame = +2 Query: 29 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MIRCQMNFKRLSLTXX 202 M F RFVE GRVALV+YG+ +LVVIVD++DQNR LVD+P + R +N KR++LT Sbjct: 1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60 Query: 203 XXXXXXXXXXATLIKA-MEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 +K+ A V + S WGKKL +++RA+L+DF RFKVM+A++K+ Sbjct: 61 KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120 Query: 380 GGAIRQELAKLK 415 AI ELAKLK Sbjct: 121 SKAINAELAKLK 132
>RL14_SCHPO (O94238) 60S ribosomal protein L14| Length = 134 Score = 92.4 bits (228), Expect = 4e-19 Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 2/127 (1%) Frame = +2 Query: 35 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXXXX 208 FKR+VE+GRV LV G+ G+L VIVD+VD RAL+D+P + R + + + LT Sbjct: 4 FKRYVEVGRVVLVTKGEYTGKLAVIVDIVDHKRALIDSPCSEFPRQVIRYGSVVLTHIVM 63 Query: 209 XXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 388 + K + DV KW +S+W KKL +K R+ LNDFDRF VM K +R Sbjct: 64 KLPRGARSGIVAKKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQ 123 Query: 389 IRQELAK 409 + +AK Sbjct: 124 VNVAVAK 130
>RL14_DROME (P55841) 60S ribosomal protein L14| Length = 166 Score = 90.1 bits (222), Expect = 2e-18 Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 2/119 (1%) Frame = +2 Query: 29 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXX 202 MPF+RFV+ GR+A + G GRLV IVDV+DQNR LVD P + R + L LT Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60 Query: 203 XXXXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 + KA E+D+K +W+ S W K +R+SLNDFDRFK+ AK +R Sbjct: 61 RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQR 119
>RL14B_YEAST (P38754) 60S ribosomal protein L14-B| Length = 138 Score = 87.8 bits (216), Expect = 9e-18 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%) Frame = +2 Query: 41 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MIRCQMNFKRLSLTXXXXXX 214 R VE+GRV L+ G+ G+L IV+++DQ + L+D P + R +N ++ LT Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFAL 72 Query: 215 XXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIR 394 AT+ K A V KW SSW KK+ ++RRA+L DF+RF+VM+ + ++ ++ Sbjct: 73 PRGARTATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVK 132 Query: 395 QELAK 409 + LAK Sbjct: 133 KALAK 137
>RL14A_YEAST (P36105) 60S ribosomal protein L14-A| Length = 138 Score = 87.4 bits (215), Expect = 1e-17 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%) Frame = +2 Query: 41 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MIRCQMNFKRLSLTXXXXXX 214 R VE+GRV L+ G+ G+L IV+++DQ + L+D P + R +N ++ LT Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFAL 72 Query: 215 XXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIR 394 AT+ K A V KW SSW KK+ ++RRA+L DF+RF+VM+ + ++ ++ Sbjct: 73 PRGARTATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVK 132 Query: 395 QELAK 409 + LAK Sbjct: 133 KALAK 137
>RL14_DROVI (Q95ZE8) 60S ribosomal protein L14| Length = 160 Score = 87.0 bits (214), Expect = 2e-17 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 2/119 (1%) Frame = +2 Query: 29 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP--DMIRCQMNFKRLSLTXX 202 MPF+RFV+ GR+A + G GRLV IVDV+DQNR LVD P + R + L LT Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60 Query: 203 XXXXXXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 + KA ++D+K +W+ S W K +R+ LNDFDRFK+ AK +R Sbjct: 61 RIKFPYTAPTRIVRKAWVDSDLKAQWKVSPWSVKAQNICKRSQLNDFDRFKLRYAKRQR 119
>RL14_TRYCO (P55843) Probable 60S ribosomal protein L14 (23 kDa cell surface| protein homolog) Length = 184 Score = 46.6 bits (109), Expect = 2e-05 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = +2 Query: 44 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD---MIRCQMNFKRLSLTXXXXXX 214 ++ GR+ + G R+ VIVD+VD NR LV+ P M R + K + Sbjct: 6 YIRAGRLVRIIRGPRQDRVGVIVDIVDANRVLVENPSDVKMWRHVQSLKNVEPLRLCVPI 65 Query: 215 XXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 L +AM A K+ N+ ++ +K A DF+R+++ +AK R Sbjct: 66 SRNCSSKVLKEAMATAKTLEKYANTKSAIRIAAKKAFAESTDFERYQLRVAKRSR 120
>RL14_TRYBB (P55842) Probable 60S ribosomal protein L14 (23 kDa cell surface| protein homolog) Length = 189 Score = 44.7 bits (104), Expect = 9e-05 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Frame = +2 Query: 44 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP---DMIRCQMNFKRLSLTXXXXXX 214 ++ GR+ + G R+ VIVD+VD NR LV+ P M R N K + Sbjct: 6 YIRAGRLVRILRGPRQNRVGVIVDIVDANRVLVENPCEQKMWRHVQNLKNVEPLKFCVSI 65 Query: 215 XXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 L +A+E V K+ + + +K A DF+R+++ +AK R Sbjct: 66 SRNCSTKALKEALESKKVLEKYAATKVRRPHRAKKAFAESTDFERYQLRVAKRSR 120
>RL14E_AERPE (Q9YDD7) 50S ribosomal protein L14e| Length = 100 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Frame = +2 Query: 41 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI----RCQMNFKRLSLTXXXX 208 + VE+GR+ + G++ GR VIVD++D+N LV P + R ++N + + Sbjct: 3 KVVEVGRICVKTRGREAGRKCVIVDIIDENFVLVTGPKSLTGVRRRRVNIDHIEILDKKV 62 Query: 209 XXXXXXXXATLIKAMEEA 262 ++KA+EEA Sbjct: 63 DIQKGASDEEVLKALEEA 80
>RL14_LEIDO (Q25278) Probable 60S ribosomal protein L14 (23 kDa cell surface| protein) (LDP 23) Length = 175 Score = 42.4 bits (98), Expect = 4e-04 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = +2 Query: 44 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD---MIRCQMNFKRLSLTXXXXXX 214 ++ GR+ + G R+ VIVD+VD NR LV+ P+ M R N K + Sbjct: 6 YICAGRLVRILRGPRQDRVGVIVDIVDANRVLVENPEDAKMWRHVQNLKNVEPLKYCVSV 65 Query: 215 XXXXXXATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 379 L A+ + K+ + ++ +K A+ DF+R+++ +A+ R Sbjct: 66 SRNCSAKALKDALASSKALEKYAKTRTAARVEAKKACAASTDFERYQLRVARRSR 120
>RL14E_METKA (Q8TX43) 50S ribosomal protein L14e| Length = 94 Score = 39.7 bits (91), Expect = 0.003 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI----RCQMNFKRLSLTXXXXXX 214 +E+GR+ + G++ G+ V+VD+VD+N ++ P + R + N K L T Sbjct: 5 IEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDI 64 Query: 215 XXXXXXATLIKAMEEA 262 + +A+EEA Sbjct: 65 DRGASDEEVKEALEEA 80
>RL14E_SULTO (Q975L7) 50S ribosomal protein L14e| Length = 96 Score = 38.5 bits (88), Expect = 0.006 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI----RCQMNFKRLSLTXXXXXX 214 +EIGR+ + G++ G+ VIVD++D+N LV P + R ++N L T Sbjct: 4 IEIGRICVKTRGREAGKKCVIVDIIDENFVLVTGPKDVNKVKRRRVNILHLEPTDKKIDI 63 Query: 215 XXXXXXATLIKAMEEA 262 + K +EEA Sbjct: 64 NKGASDDEVKKKLEEA 79
>RL14E_PYRAE (Q8ZYB4) 50S ribosomal protein L14e| Length = 103 Score = 38.5 bits (88), Expect = 0.006 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Frame = +2 Query: 41 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI----RCQMNFKRLSLTXXXX 208 + ++IGRV + G++ GR V+VD+VD+N ++ P I R ++N + T Sbjct: 3 KVIDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKI 62 Query: 209 XXXXXXXXATLIKAMEEA 262 + KA+E A Sbjct: 63 DIKRGASDDEVAKAIEAA 80
>RL14E_METJA (P54054) 50S ribosomal protein L14e| Length = 80 Score = 37.7 bits (86), Expect = 0.011 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 196 +E+GRV + G++ G++ VIVD++D+N +VD + R + N K L T Sbjct: 4 IEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGL-VKRRRCNIKHLEPT 52
>RL14E_SULAC (Q4JAJ9) 50S ribosomal protein L14e| Length = 96 Score = 37.0 bits (84), Expect = 0.018 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI 160 +EIGR+ + G++ G+ VIVD++D N LV P I Sbjct: 4 IEIGRICVKTRGREAGKKCVIVDIIDSNFVLVTGPKEI 41
>RL14E_PYRKO (Q5JJE4) 50S ribosomal protein L14e| Length = 83 Score = 36.6 bits (83), Expect = 0.024 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM---IRCQMNFKRL 187 +E+GR+A+V G+ G+ VV+ D++D+N LV + R +MN K L Sbjct: 4 IEVGRIAVVIAGRRAGQKVVVADIIDKNFVLVTGAGLNKVKRRRMNVKHL 53
>RL14E_PYRFU (Q8U2L5) 50S ribosomal protein L14e| Length = 83 Score = 36.6 bits (83), Expect = 0.024 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 3/50 (6%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM---IRCQMNFKRL 187 +++GR+A+V G+ G+ VV+VD++D+N LV + R +MN K + Sbjct: 4 IDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGAGLNKVKRRRMNIKHI 53
>RL14E_SULSO (Q980C1) 50S ribosomal protein L14e| Length = 96 Score = 35.4 bits (80), Expect = 0.054 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMI----RCQMNFKRLSLTXXXXXX 214 +E+GR+ + G++ G VIVD++D N LV P I R ++N L T Sbjct: 4 IEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDI 63 Query: 215 XXXXXXATLIKAMEEADV 268 + K +EE+++ Sbjct: 64 QKGASDEEVKKKLEESNL 81
>RL14E_PYRHO (P59937) 50S ribosomal protein L14e| Length = 82 Score = 35.4 bits (80), Expect = 0.054 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM---IRCQMNFKRL 187 +++GR+A++ G+ G+ VIVD++D+N LV + R +MN K L Sbjct: 4 IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGAGLNKVKRRRMNIKHL 53
>RL14E_PYRAB (Q9UZJ5) 50S ribosomal protein L14e| Length = 82 Score = 35.4 bits (80), Expect = 0.054 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM---IRCQMNFKRL 187 +++GR+A++ G+ G+ VIVD++D+N LV + R +MN K L Sbjct: 4 IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGAGLNKVKRRRMNIKHL 53
>RL14E_METMP (Q6LZK2) 50S ribosomal protein L14e| Length = 77 Score = 34.7 bits (78), Expect = 0.092 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 196 +E+GRV + G++ G VIV+V+D+N ++D + R + N K + T Sbjct: 4 IEVGRVCIKTLGREAGNTCVIVEVLDKNFVVIDG-SVKRRRCNLKHVEPT 52
>CSMD3_HUMAN (Q7Z407) CUB and sushi domain-containing protein 3 precursor (CUB and| sushi multiple domains protein 3) Length = 3670 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -3 Query: 394 PDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 233 PDS +PL S D + + I+ S+ ++ + G+V GFH+ + L +SC Sbjct: 1611 PDSNSPLIGSFQDSKLPERIESSSNTMHLAFRSDGSVSYTGFHLEYKAKLRESC 1664
>CSMD3_MOUSE (Q80T79) CUB and sushi domain-containing protein 3 (CUB and sushi| multiple domains protein 3) (Fragment) Length = 2796 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -3 Query: 394 PDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 233 PDS +PL S D + + I+ S+ ++ + G+V GFH+ + L +SC Sbjct: 807 PDSNSPLIGSFQDSKLPERIESSSNTMHLAFRSDGSVSYTGFHLEYKAKLRESC 860
>C71C1_MAIZE (Q43250) Cytochrome P450 71C1 (EC 1.14.-.-) (Benzoxazineless 4)| Length = 535 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 284 SPIWFSHQLPPWP*SKLPFWGY 219 SP W H+LPP P KLP G+ Sbjct: 47 SPKWKQHRLPPTPPGKLPIIGH 68
>RL14E_METTH (O26139) 50S ribosomal protein L14e| Length = 75 Score = 29.6 bits (65), Expect = 2.9 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +2 Query: 47 VEIGRVALVNYGKDYGRLVVIVDVVDQN 130 +E+GRV + G++ G VI+D++D+N Sbjct: 4 IEVGRVCVKTAGREAGENGVILDIIDKN 31
>LNK_HUMAN (Q9UQQ2) Lymphocyte-specific adapter protein Lnk (Signal| transduction protein Lnk) (Lymphocyte adapter protein) Length = 575 Score = 29.6 bits (65), Expect = 2.9 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -2 Query: 296 PRSCSPIWFSHQLPPWP*SKLPFWG 222 P SC+ + F LP W LP WG Sbjct: 469 PGSCNTVLFPFSLPHWDSESLPHWG 493
>JHD3B_DROME (Q9V6L0) Probable JmjC domain-containing histone demethylation| protein 3B (EC 1.14.11.-) Length = 452 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -3 Query: 382 TPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLD 242 +P L QHD+ K+ Q ++ PFG+H F HG + Sbjct: 244 SPQILKQHDVPVSKITQEAGEIM--------ITFPFGYHAGFNHGFN 282
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 394 PDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLP 278 P TTPL+ + V+V+QR +S +NN PG LP Sbjct: 3487 PGKTTPLSGRHVVQQQVQVLQRQASDINNTKSLPGGKLP 3525 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,237,364 Number of Sequences: 219361 Number of extensions: 808718 Number of successful extensions: 2164 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2153 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
