| Clone Name | bags16a06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107G14, full insert sequence Length = 2090 Score = 555 bits (280), Expect = e-155 Identities = 511/588 (86%) Strand = Plus / Plus Query: 53 aactcacggacagccagcatcaccaacaactctgggaaaagagatggcaaattttgcagc 112 |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 873 aactcatggacagccagcatcgccaacaactctgggaaaagagatggcgaattttgcggc 932 Query: 113 cagattatctgatatcgggaagagtttttctgaggtcaagatactagggaaatttgctgg 172 |||||| || || || || |||||||||||||||||||||||||||||||| ||||| Sbjct: 933 cagattgtcaagcataggaaatagtttttctgaggtcaagatactagggaaattcgctgg 992 Query: 173 cgctgttggaaattacaatgctgatgtagttgcatatccggaaattgactggcctaagat 232 ||||| ||||||||||| |||||||| ||||||||||| ||| |||||||||||||| | Sbjct: 993 agctgtcggaaattacaacgctgatgttgttgcatatccagaagttgactggcctaaggt 1052 Query: 233 gacagaagagtttgtcagatccttaggtttggagttcaatccttacgttactcagattga 292 ||||||| ||||||| ||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 1053 tgcagaagattttgtcaaatcgttgggcttggagttcaatccttatgttacccagattga 1112 Query: 293 acctcatgactatatctcaaagctcttcaatctatttgtccagttcaacattgtcttgac 352 || |||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1113 gccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaatgtcttgac 1172 Query: 353 tgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcagatagcaaa 412 ||| || || |||||||||||| | || |||||| |||| ||||||||||||||| ||| Sbjct: 1173 tgatttcgatagagacatgtggacctatatatcactaggctacttcaagcagatagtaaa 1232 Query: 413 ggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 |||||||||||||||||| ||||| |||||||||||| |||||||||| | || ||||| Sbjct: 1233 ggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccattgatttcgaaaa 1292 Query: 473 tagtgaaggcaattttagtgtgtcgaatggtcttttatgtactttaagtatgaagctacc 532 |||||| |||||||| | | | | |||||| || | | ||||||| ||||||||||| Sbjct: 1293 tagtgacggcaatttgactatagccaatggtacattgtcttctttaagcatgaagctacc 1352 Query: 533 aatatcaaggttgcagcgtgatctcacagattcaactgttttgagaaacttgggtgttgg 592 ||| || || ||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 1353 aatttctcggatgcagcgtgatctcacagactcgactgttttgagaaatttgggtgttgg 1412 Query: 593 attagggcattcactcttggcttacaaagcaacaatgcagggaatcaa 640 |||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 1413 attagggcattcactcttggcttacaaagctacattgcgaggaatcaa 1460
>gb|AY104809.1| Zea mays PCO094773 mRNA sequence Length = 1395 Score = 511 bits (258), Expect = e-142 Identities = 492/570 (86%) Strand = Plus / Plus Query: 53 aactcacggacagccagcatcaccaacaactctgggaaaagagatggcaaattttgcagc 112 |||||| || ||||||||||||||||||||| ||||||| ||||||||||| || || || Sbjct: 252 aactcatgggcagccagcatcaccaacaactgtgggaaaggagatggcaaacttcgcggc 311 Query: 113 cagattatctgatatcgggaagagtttttctgaggtcaagatactagggaaatttgctgg 172 ||||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 312 cagattatctgatataggaaagagtttctcagaggtgaagatactagggaaatttgctgg 371 Query: 173 cgctgttggaaattacaatgctgatgtagttgcatatccggaaattgactggcctaagat 232 ||||||||| ||||||||| ||||||| ||||||||||| ||| |||||||||||||| | Sbjct: 372 cgctgttggcaattacaatcctgatgtggttgcatatcctgaagttgactggcctaaggt 431 Query: 233 gacagaagagtttgtcagatccttaggtttggagttcaatccttacgttactcagattga 292 | ||||||||||||| |||||||| |||||| |||| ||||| || |||||||||||||| Sbjct: 432 ggcagaagagtttgttagatccttgggtttgcagtttaatccctatgttactcagattga 491 Query: 293 acctcatgactatatctcaaagctcttcaatctatttgtccagttcaacattgtcttgac 352 |||||||| || || |||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 492 gcctcatgattacatatcaaagctcttcaatctattcacccagttcaacaatgtgttgac 551 Query: 353 tgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcagatagcaaa 412 ||| ||||| |||||||||||||| || |||||| |||| |||||||||||||| |||| Sbjct: 552 tgattttgatagagacatgtggtcctatatatcattaggctacttcaagcagataccaaa 611 Query: 413 ggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 ||||||||||||||| || |||||||||||||| |||||||| ||||| | |||||||| Sbjct: 612 ggctggtgaagttggttcttccaccatgcctcataaaatcaaccccattgattttgaaaa 671 Query: 473 tagtgaaggcaattttagtgtgtcgaatggtcttttatgtactttaagtatgaagctacc 532 |||||| || ||||| || || ||||| | | |||| | | |||| ||||| || || Sbjct: 672 tagtgatggtaatttatgtctggcgaattctgtattatctggtataagcatgaaactgcc 731 Query: 533 aatatcaaggttgcagcgtgatctcacagattcaactgttttgagaaacttgggtgttgg 592 |||||| || |||||||||| || ||||| |||||||||||||||||||||||| | || Sbjct: 732 aatatcccggatgcagcgtgacctgacagactcaactgttttgagaaacttgggtatggg 791 Query: 593 attagggcattcactcttggcttacaaagc 622 ||| || ||||| || |||||||||||||| Sbjct: 792 attgggtcattctctattggcttacaaagc 821
>gb|BT018322.1| Zea mays clone EL01T0208B08.c mRNA sequence Length = 1455 Score = 458 bits (231), Expect = e-125 Identities = 384/435 (88%) Strand = Plus / Plus Query: 53 aactcacggacagccagcatcaccaacaactctgggaaaagagatggcaaattttgcagc 112 |||||| || ||||||||||||||||||||| ||||||| ||||||||||| || || || Sbjct: 287 aactcatgggcagccagcatcaccaacaactgtgggaaaggagatggcaaacttcgcggc 346 Query: 113 cagattatctgatatcgggaagagtttttctgaggtcaagatactagggaaatttgctgg 172 ||||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 347 cagattatctgatataggaaagagtttctcagaggtgaagatactagggaaatttgctgg 406 Query: 173 cgctgttggaaattacaatgctgatgtagttgcatatccggaaattgactggcctaagat 232 ||||||||| ||||||||||| ||||| ||||||||||| ||| |||||||||||||| | Sbjct: 407 cgctgttggcaattacaatgccgatgtggttgcatatcctgaagttgactggcctaaggt 466 Query: 233 gacagaagagtttgtcagatccttaggtttggagttcaatccttacgttactcagattga 292 | ||||||||||||| |||||||| |||||| |||| ||||| || |||||||||||||| Sbjct: 467 ggcagaagagtttgttagatccttgggtttgcagtttaatccctatgttactcagattga 526 Query: 293 acctcatgactatatctcaaagctcttcaatctatttgtccagttcaacattgtcttgac 352 ||||||||||| || |||||||||||||||||||| |||||| |||| ||| ||||| Sbjct: 527 gcctcatgactacatatcaaagctcttcaatctattcacccagtttaacaatgtgttgac 586 Query: 353 tgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcagatagcaaa 412 ||| ||||| |||||||||||||| || |||||| |||| |||||||||||||| |||| Sbjct: 587 tgattttgatagagacatgtggtcctatatatcattaggctacttcaagcagataccaaa 646 Query: 413 ggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 ||||||||||||||| || ||||| |||||||| |||||||| ||||| | |||||||| Sbjct: 647 ggctggtgaagttggttcttccactatgcctcataaaatcaaccccattgattttgaaaa 706 Query: 473 tagtgaaggcaattt 487 |||||| |||||||| Sbjct: 707 tagtgatggcaattt 721 Score = 101 bits (51), Expect = 3e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 517 taagtatgaagctaccaatatcaaggttgcagcgtgatctcacagattcaactgttttga 576 |||| ||||| ||||||||||| ||||||||||||| || ||||| || |||||||||| Sbjct: 751 taagcatgaaactaccaatatcccggttgcagcgtgacctaacagactcgactgttttga 810 Query: 577 gaaacttgggtgttggattagggcattcactcttggcttacaaagcaacaatgcagggaa 636 ||||| ||||| | |||||||| ||||| || |||||||||||||| || |||| |||| Sbjct: 811 gaaacctgggtatgggattaggtcattctctattggcttacaaagctaccatgcgtggaa 870 Query: 637 tca 639 ||| Sbjct: 871 tca 873
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 222 bits (112), Expect = 1e-54 Identities = 193/220 (87%) Strand = Plus / Plus Query: 64 agccagcatcaccaacaactctgggaaaagagatggcaaattttgcagccagattatctg 123 |||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 11185248 agccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaa 11185307 Query: 124 atatcgggaagagtttttctgaggtcaagatactagggaaatttgctggcgctgttggaa 183 || || || |||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 11185308 gcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaa 11185367 Query: 184 attacaatgctgatgtagttgcatatccggaaattgactggcctaagatgacagaagagt 243 ||||||| |||||||| ||||||||||| ||| |||||||||||||| | ||||||| | Sbjct: 11185368 attacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagatt 11185427 Query: 244 ttgtcagatccttaggtttggagttcaatccttacgttac 283 |||||| ||| || || ||||||||||||||||| ||||| Sbjct: 11185428 ttgtcaaatcgttgggcttggagttcaatccttatgttac 11185467 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 546 cagcgtgatctcacagattcaactgttttgagaaacttgggtgttggattagggcattca 605 ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 11186432 cagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattca 11186491 Query: 606 ctcttggcttacaaagcaacaatgcagggaatcaa 640 ||||||||||||||||| ||| ||| |||||||| Sbjct: 11186492 ctcttggcttacaaagctacattgcgaggaatcaa 11186526 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 285 cagattgaacctcatgactatatctcaaagctcttcaatctatttgtccagttcaacatt 344 |||||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| | Sbjct: 11185668 cagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaat 11185727 Query: 345 gtcttgactgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcag 404 ||||||||||| || || |||||||||||| | || |||||| |||| ||||||||||| Sbjct: 11185728 gtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcag 11185787 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 402 cagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatc 461 ||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 11185916 cagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccatt 11185975 Query: 462 aactttgaaaatagtgaaggcaattt 487 | || ||||||||||| |||||||| Sbjct: 11185976 gatttcgaaaatagtgacggcaattt 11186001
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 222 bits (112), Expect = 1e-54 Identities = 193/220 (87%) Strand = Plus / Plus Query: 64 agccagcatcaccaacaactctgggaaaagagatggcaaattttgcagccagattatctg 123 |||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 98605 agccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaa 98664 Query: 124 atatcgggaagagtttttctgaggtcaagatactagggaaatttgctggcgctgttggaa 183 || || || |||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 98665 gcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaa 98724 Query: 184 attacaatgctgatgtagttgcatatccggaaattgactggcctaagatgacagaagagt 243 ||||||| |||||||| ||||||||||| ||| |||||||||||||| | ||||||| | Sbjct: 98725 attacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagatt 98784 Query: 244 ttgtcagatccttaggtttggagttcaatccttacgttac 283 |||||| ||| || || ||||||||||||||||| ||||| Sbjct: 98785 ttgtcaaatcgttgggcttggagttcaatccttatgttac 98824 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 546 cagcgtgatctcacagattcaactgttttgagaaacttgggtgttggattagggcattca 605 ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 99789 cagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattca 99848 Query: 606 ctcttggcttacaaagcaacaatgcagggaatcaa 640 ||||||||||||||||| ||| ||| |||||||| Sbjct: 99849 ctcttggcttacaaagctacattgcgaggaatcaa 99883 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 285 cagattgaacctcatgactatatctcaaagctcttcaatctatttgtccagttcaacatt 344 |||||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| | Sbjct: 99025 cagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaat 99084 Query: 345 gtcttgactgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcag 404 ||||||||||| || || |||||||||||| | || |||||| |||| ||||||||||| Sbjct: 99085 gtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcag 99144 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 402 cagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatc 461 ||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 99273 cagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccatt 99332 Query: 462 aactttgaaaatagtgaaggcaattt 487 | || ||||||||||| |||||||| Sbjct: 99333 gatttcgaaaatagtgacggcaattt 99358
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 222 bits (112), Expect = 1e-54 Identities = 193/220 (87%) Strand = Plus / Minus Query: 64 agccagcatcaccaacaactctgggaaaagagatggcaaattttgcagccagattatctg 123 |||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 95481 agccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaa 95422 Query: 124 atatcgggaagagtttttctgaggtcaagatactagggaaatttgctggcgctgttggaa 183 || || || |||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 95421 gcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaa 95362 Query: 184 attacaatgctgatgtagttgcatatccggaaattgactggcctaagatgacagaagagt 243 ||||||| |||||||| ||||||||||| ||| |||||||||||||| | ||||||| | Sbjct: 95361 attacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagatt 95302 Query: 244 ttgtcagatccttaggtttggagttcaatccttacgttac 283 |||||| ||| || || ||||||||||||||||| ||||| Sbjct: 95301 ttgtcaaatcgttgggcttggagttcaatccttatgttac 95262 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 546 cagcgtgatctcacagattcaactgttttgagaaacttgggtgttggattagggcattca 605 ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 94297 cagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattca 94238 Query: 606 ctcttggcttacaaagcaacaatgcagggaatcaa 640 ||||||||||||||||| ||| ||| |||||||| Sbjct: 94237 ctcttggcttacaaagctacattgcgaggaatcaa 94203 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 285 cagattgaacctcatgactatatctcaaagctcttcaatctatttgtccagttcaacatt 344 |||||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| | Sbjct: 95061 cagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaat 95002 Query: 345 gtcttgactgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcag 404 ||||||||||| || || |||||||||||| | || |||||| |||| ||||||||||| Sbjct: 95001 gtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcag 94942 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 402 cagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatc 461 ||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 94813 cagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccatt 94754 Query: 462 aactttgaaaatagtgaaggcaattt 487 | || ||||||||||| |||||||| Sbjct: 94753 gatttcgaaaatagtgacggcaattt 94728
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 222 bits (112), Expect = 1e-54 Identities = 193/220 (87%) Strand = Plus / Plus Query: 64 agccagcatcaccaacaactctgggaaaagagatggcaaattttgcagccagattatctg 123 |||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 11182011 agccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaa 11182070 Query: 124 atatcgggaagagtttttctgaggtcaagatactagggaaatttgctggcgctgttggaa 183 || || || |||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 11182071 gcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaa 11182130 Query: 184 attacaatgctgatgtagttgcatatccggaaattgactggcctaagatgacagaagagt 243 ||||||| |||||||| ||||||||||| ||| |||||||||||||| | ||||||| | Sbjct: 11182131 attacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagatt 11182190 Query: 244 ttgtcagatccttaggtttggagttcaatccttacgttac 283 |||||| ||| || || ||||||||||||||||| ||||| Sbjct: 11182191 ttgtcaaatcgttgggcttggagttcaatccttatgttac 11182230 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 546 cagcgtgatctcacagattcaactgttttgagaaacttgggtgttggattagggcattca 605 ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 11183195 cagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattca 11183254 Query: 606 ctcttggcttacaaagcaacaatgcagggaatcaa 640 ||||||||||||||||| ||| ||| |||||||| Sbjct: 11183255 ctcttggcttacaaagctacattgcgaggaatcaa 11183289 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 285 cagattgaacctcatgactatatctcaaagctcttcaatctatttgtccagttcaacatt 344 |||||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| | Sbjct: 11182431 cagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaat 11182490 Query: 345 gtcttgactgactttgacagagacatgtggtcttacatatcagcaggccacttcaagcag 404 ||||||||||| || || |||||||||||| | || |||||| |||| ||||||||||| Sbjct: 11182491 gtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcag 11182550 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 402 cagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatc 461 ||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 11182679 cagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccatt 11182738 Query: 462 aactttgaaaatagtgaaggcaattt 487 | || ||||||||||| |||||||| Sbjct: 11182739 gatttcgaaaatagtgacggcaattt 11182764
>gb|AY389620.1| Hyacinthus orientalis adenylosuccinate-AMP lyase mRNA, partial cds Length = 843 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 558 acagattcaactgttttgagaaacttgggtgttggattagggcattcactcttggcttac 617 |||||||| ||||||||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 225 acagattcgactgttttgaggaatttgggtgttggattagggtattctctcttggcttac 284 Query: 618 aaa 620 ||| Sbjct: 285 aaa 287 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 394 acttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatca 453 |||| ||||||||| | ||||| || || ||||||| || || |||||||||||| | | Sbjct: 61 actttaagcagataactaaggcgggagagattggatcttctacaatgcctcacaaagtta 120 Query: 454 atcccatcaactttgaaaatagtgaaggcaattt 487 ||||||| | |||||||| ||||| |||||||| Sbjct: 121 atcccattgattttgaaaacagtgagggcaattt 154
>gb|AY429424.1| Nicotiana tabacum adenylosuccinate lyase (purB) mRNA, complete cds Length = 2330 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 414 gctggtgaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaat 473 ||||||||| |||| ||||| || |||||||||||| | ||||| ||| ||||||||||| Sbjct: 1135 gctggtgaaattgggtcctcgacgatgcctcacaaagtaaatccaatcgactttgaaaat 1194 Query: 474 agtgaaggcaat 485 |||||||||||| Sbjct: 1195 agtgaaggcaat 1206 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaatgctgatgtagttgcatatcc 211 |||||||||||||| ||||| |||||||||||||| |||||| ||||||||| Sbjct: 880 gggaaatttgctggtgctgtaggaaattacaatgcgcatgtagctgcatatcc 932 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 57 cacggacagccagcatcaccaacaactctgggaaaagagatggcaaattttgc 109 ||||| |||||||| ||||||||||| || ||||| || ||||||| |||||| Sbjct: 778 cacgggcagccagcttcaccaacaacccttggaaaggaaatggcaatttttgc 830 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Plus Query: 545 gcagcgtgatctcacagattcaactgttttgagaaacttgggtgttggattagggcattc 604 |||||| ||| | ||||||||||||||| |||||||| |||| || ||| |||| ||||| Sbjct: 1266 gcagcgggatttgacagattcaactgttctgagaaacatgggagtaggactaggacattc 1325 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactatat 307 |||||||| || ||| ||||||| ||| ||||||||||||| Sbjct: 988 ttcaatccatatgttcctcagatcgaaactcatgactatat 1028
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 435 accatgcctcacaaaatcaatcccatcaactttgaaaat 473 ||||||||||||||| ||||||||||| ||||||||||| Sbjct: 2422599 accatgcctcacaaagtcaatcccatcgactttgaaaat 2422637
>gb|AF054449.1|AF054449 Mesembryanthemum crystallinum adenylosuccinate lyase mRNA, partial cds Length = 333 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactat 305 ||||||||||| || |||||||||||||||||||||||| Sbjct: 223 ttcaatccttatgtgactcagattgaacctcatgactat 261
>ref|NM_117957.3| Arabidopsis thaliana adenylosuccinate lyase/ catalytic AT4G18440 mRNA, complete cds Length = 1940 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactatat 307 ||||| || ||||| |||||||||||||||||||||||||| Sbjct: 1015 ttcaacccatacgtgactcagattgaacctcatgactatat 1055 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 1292 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 1336
>ref|NM_103319.2| Arabidopsis thaliana adenylosuccinate lyase/ catalytic AT1G36280 mRNA, complete cds Length = 1785 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | |||||||||||||| ||||||||| |||||| Sbjct: 1282 tgcagcgtgatttaacagattcaactgtcttgagaaacatgggtg 1326 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 276 tacgttactcagattgaacctcatgactatat 307 ||||| |||||||||||||| ||||||||||| Sbjct: 1014 tacgtgactcagattgaaccacatgactatat 1045 Score = 44.1 bits (22), Expect = 0.58 Identities = 91/114 (79%) Strand = Plus / Plus Query: 336 ttcaacattgtcttgactgactttgacagagacatgtggtcttacatatcagcaggccac 395 ||||||| |||||||| ||| ||||||||||| || ||| |||||||| ||| || Sbjct: 1074 ttcaacaatgtcttgattgattttgacagagatatatggagctacatatctctaggttac 1133 Query: 396 ttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaa 449 || ||||||||| | || || |||||| | ||||| || || |||||||||||| Sbjct: 1134 tttaagcagataactaaagcgggtgaaatcggatcatcgacaatgcctcacaaa 1187 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaa 190 ||||||||||| || ||||||||||| ||||| Sbjct: 897 gggaaatttgcgggtgctgttggaaactacaa 928
>gb|AY150476.1| Arabidopsis thaliana putative adenylosuccinate lyase (At4g18440) mRNA, complete cds Length = 1642 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactatat 307 ||||| || ||||| |||||||||||||||||||||||||| Sbjct: 940 ttcaacccatacgtgactcagattgaacctcatgactatat 980 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 1217 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 1261
>gb|AY074500.1| Arabidopsis thaliana putative adenylosuccinate lyase (At4g18440) mRNA, complete cds Length = 1950 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactatat 307 ||||| || ||||| |||||||||||||||||||||||||| Sbjct: 1015 ttcaacccatacgtgactcagattgaacctcatgactatat 1055 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 1292 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 1336
>emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 7/7 Length = 195767 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 420 gaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 |||||||| || ||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 163981 gaagttggttcttccaccatgccgcacaaagtcaaccccatcgactttgaaaa 163929
>gb|AY063232.1| Vigna unguiculata adenylosuccinate-AMP lyase (pur8) mRNA, complete cds Length = 1778 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaatgctgatgtagttgcatatcc 211 |||||||||||||| || |||||||||||||| || |||| ||||||||||| Sbjct: 828 gggaaatttgctggtgcagttggaaattacaacgcacatgttgttgcatatcc 880 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 270 aatccttacgttactcagattgaacctcatgacta 304 |||||||||||| ||||||||||| | |||||||| Sbjct: 939 aatccttacgttgctcagattgaaacccatgacta 973
>gb|AC025781.8|AC025781 Arabidopsis thaliana chromosome 1 BAC F15C21 genomic sequence, complete sequence Length = 112862 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | |||||||||||||| ||||||||| |||||| Sbjct: 106292 tgcagcgtgatttaacagattcaactgtcttgagaaacatgggtg 106336 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 ttcaacattgtcttgactgactttgacagaga 367 ||||||| |||||||| ||| ||||||||||| Sbjct: 105920 ttcaacaatgtcttgattgattttgacagaga 105951 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaa 190 ||||||||||| || ||||||||||| ||||| Sbjct: 105666 gggaaatttgcgggtgctgttggaaactacaa 105697
>gb|BT002331.1| Arabidopsis thaliana clone C105138 putative adenylosuccinate lyase (At1g36280) mRNA, complete cds Length = 1615 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | |||||||||||||| ||||||||| |||||| Sbjct: 1190 tgcagcgtgatttaacagattcaactgtcttgagaaacatgggtg 1234 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 276 tacgttactcagattgaacctcatgactatat 307 ||||| |||||||||||||| ||||||||||| Sbjct: 922 tacgtgactcagattgaaccacatgactatat 953 Score = 44.1 bits (22), Expect = 0.58 Identities = 91/114 (79%) Strand = Plus / Plus Query: 336 ttcaacattgtcttgactgactttgacagagacatgtggtcttacatatcagcaggccac 395 ||||||| |||||||| ||| ||||||||||| || ||| |||||||| ||| || Sbjct: 982 ttcaacaatgtcttgattgattttgacagagatatatggagctacatatctctaggttac 1041 Query: 396 ttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaa 449 || ||||||||| | || || |||||| | ||||| || || |||||||||||| Sbjct: 1042 tttaagcagataactaaagcgggtgaaatcggatcatcgacaatgcctcacaaa 1095 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaa 190 ||||||||||| || ||||||||||| ||||| Sbjct: 805 gggaaatttgcgggtgctgttggaaactacaa 836
>gb|AY080867.1| Arabidopsis thaliana At1g36280 mRNA sequence Length = 1802 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | |||||||||||||| ||||||||| |||||| Sbjct: 1283 tgcagcgtgatttaacagattcaactgtcttgagaaacatgggtg 1327 Score = 52.0 bits (26), Expect = 0.002 Identities = 137/174 (78%) Strand = Plus / Plus Query: 276 tacgttactcagattgaacctcatgactatatctcaaagctcttcaatctatttgtccag 335 ||||| |||||||||||||| ||||||||||| | | || || ||| | || ||| Sbjct: 1015 tacgtgactcagattgaaccacatgactatatggctagactttttaatacaattagccaa 1074 Query: 336 ttcaacattgtcttgactgactttgacagagacatgtggtcttacatatcagcaggccac 395 ||||||| |||||||| ||| ||||||||||| || ||| |||||||| ||| || Sbjct: 1075 ttcaacaatgtcttgattgattttgacagagatatatggagctacatatctctaggttac 1134 Query: 396 ttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaa 449 || ||||||||| | || || |||||| ||||||| || || |||||||||||| Sbjct: 1135 tttaagcagataactaaagcgggtgaaattggatcatcgacaatgcctcacaaa 1188 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaa 190 ||||||||||| || ||||||||||| ||||| Sbjct: 898 gggaaatttgcgggtgctgttggaaactacaa 929
>gb|AE006223.1| Pasteurella multocida subsp. multocida str. Pm70 section 190 of 204 of the complete genome Length = 10227 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 417 ggtgaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaat 473 |||||| ||||||| || |||||||| || ||| ||||||| ||| ||||||||||| Sbjct: 1633 ggtgaaattggatcttcaaccatgccacataaagtcaatccaatcgactttgaaaat 1689
>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48 Length = 194143 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 154213 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 154169 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 285 cagattgaacctcatgactatat 307 ||||||||||||||||||||||| Sbjct: 154642 cagattgaacctcatgactatat 154620
>emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, BAC clone F28J12 (ESSAII project) Length = 110102 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 46248 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 46204 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 285 cagattgaacctcatgactatat 307 ||||||||||||||||||||||| Sbjct: 46677 cagattgaacctcatgactatat 46655
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 432 tccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 ||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 292148 tccaccatgccgcacaaagtcaaccccatcgactttgaaaa 292188
>emb|BX828280.1|CNS0A3TB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1891 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 544 tgcagcgtgatctcacagattcaactgttttgagaaacttgggtg 588 ||||||||||| | || ||||||||||| ||||||||| |||||| Sbjct: 1286 tgcagcgtgatttaactgattcaactgtcttgagaaacatgggtg 1330 Score = 42.1 bits (21), Expect = 2.3 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 267 ttcaatccttacgttactcagattgaacctcatgactatat 307 ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 1009 ttcaacccatacgtgactcagat-gaacctcatgactatat 1048
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 432 tccaccatgcctcacaaaatcaatcccatcaactttgaaaa 472 ||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 1668639 tccaccatgccgcacaaagtcaaccccatcgactttgaaaa 1668599
>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence Length = 127300 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 159 gggaaatttgctggcgctgttggaaattacaatgc 193 ||||||||||||||||| ||| |||||||||||| Sbjct: 2019 gggaaatttgctggcgcagttttaaattacaatgc 2053
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 394 acttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaa 448 |||||||||||| || ||||| || ||||| || |||||||||||||| ||||| Sbjct: 1959532 acttcaagcagaaagtaaaggaaggcgaagtcggctcctccaccatgccgcacaa 1959586
>emb|CT963105.1| Medicago truncatula chromosome 5 clone mte1-71h1, COMPLETE SEQUENCE Length = 68887 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 159 gggaaatttgctggcgctgttggaaattacaatgc 193 ||||||||||||||||| ||| |||||||||||| Sbjct: 1007 gggaaatttgctggcgcagttttaaattacaatgc 973
>gb|AC125334.4| Homo sapiens BAC clone RP11-569E7 from 4, complete sequence Length = 18306 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 561 gattcaactgttttgagaaact 582 |||||||||||||||||||||| Sbjct: 2348 gattcaactgttttgagaaact 2369
>ref|XM_747274.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g10010) partial mRNA Length = 4410 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gcaaattttgcagccagatta 119 ||||||||||||||||||||| Sbjct: 40 gcaaattttgcagccagatta 60
>gb|AY380825.1| Gallus gallus serum- and glucocorticoid-induced kinase mRNA, complete cds Length = 2409 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 acattgtcttgactgactttg 360 ||||||||||||||||||||| Sbjct: 744 acattgtcttgactgactttg 764
>emb|AL354739.15| Human DNA sequence from clone RP11-379K8 on chromosome 13, complete sequence Length = 179790 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 gtatgaagctaccaatatcaa 540 ||||||||||||||||||||| Sbjct: 63652 gtatgaagctaccaatatcaa 63632
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 ccatgcctcacaaaatcaatc 456 ||||||||||||||||||||| Sbjct: 78917 ccatgcctcacaaaatcaatc 78897
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 ccatgcctcacaaaatcaatc 456 ||||||||||||||||||||| Sbjct: 114503 ccatgcctcacaaaatcaatc 114483
>ref|NM_204476.1| Gallus gallus serum/glucocorticoid regulated kinase (SGK), mRNA Length = 2409 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 acattgtcttgactgactttg 360 ||||||||||||||||||||| Sbjct: 744 acattgtcttgactgactttg 764
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 ccatgcctcacaaaatcaatc 456 ||||||||||||||||||||| Sbjct: 32719482 ccatgcctcacaaaatcaatc 32719462
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 ttcactcttggcttacaaagc 622 ||||||||||||||||||||| Sbjct: 25846 ttcactcttggcttacaaagc 25826
>emb|BX935782.1| Gallus gallus finished cDNA, clone ChEST162f6 Length = 2103 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 acattgtcttgactgactttg 360 ||||||||||||||||||||| Sbjct: 453 acattgtcttgactgactttg 473
>emb|BX934998.1| Gallus gallus finished cDNA, clone ChEST189c3 Length = 1550 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 acattgtcttgactgactttg 360 ||||||||||||||||||||| Sbjct: 936 acattgtcttgactgactttg 956
>emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in linkage group 11, complete sequence Length = 174071 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 agagatggcaaattttgcagccaga 116 |||||||||||||| |||||||||| Sbjct: 54981 agagatggcaaattatgcagccaga 54957
>gb|AC131160.6| Homo sapiens 3 BAC RP11-449K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70958 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ctttgaaaatagtgaaggcaa 484 ||||||||||||||||||||| Sbjct: 1848 ctttgaaaatagtgaaggcaa 1828
>gb|AC011093.6|AC011093 Homo sapiens, clone RP11-1L24, complete sequence Length = 161151 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 gtatgaagctaccaatatcaa 540 ||||||||||||||||||||| Sbjct: 108384 gtatgaagctaccaatatcaa 108364
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 394 acttcaagcagatagcaaaggctggtgaagttggatcctccaccatgcctcacaaaatca 453 |||||||||||| ||| ||| || ||||| || || |||||||||||||||||| ||| Sbjct: 2394970 acttcaagcagaaagcggtggccggcgaagtcggttcttccaccatgcctcacaaagtca 2394911 Query: 454 a 454 | Sbjct: 2394910 a 2394910
>emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chromosome 2, complete sequence Length = 157458 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 tcagatccttaggtttggagt 267 ||||||||||||||||||||| Sbjct: 81449 tcagatccttaggtttggagt 81429
>gb|AC068644.15| Homo sapiens 3 BAC RP11-315J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178688 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 ctttgaaaatagtgaaggcaa 484 ||||||||||||||||||||| Sbjct: 157 ctttgaaaatagtgaaggcaa 177
>gb|AC102324.9| Mus musculus chromosome 1, clone RP24-476A18, complete sequence Length = 129634 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 agatccttaggtttggagtt 268 |||||||||||||||||||| Sbjct: 1232 agatccttaggtttggagtt 1213
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 545 gcagcgtgatctcacagattcaactgttttgagaaacttgggtgttgg 592 |||||||||| | || |||||||| || ||| | |||||||||||||| Sbjct: 1230362 gcagcgtgatttaacggattcaacggtgttgcgtaacttgggtgttgg 1230315
>gb|AY321444.1| Glycine max glycinamide ribonucleotide transformylase (pur3) mRNA, complete cds Length = 1376 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgaagttggatcctccacca 438 |||||||||||||||||||| Sbjct: 599 tgaagttggatcctccacca 580
>gb|AC099415.4| Mus musculus BAC clone RP23-122D8 from chromosome 8, complete sequence Length = 215488 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 224 gcctaagatgacagaagagtttgtcagatcct 255 |||||||| || ||||||| |||||||||||| Sbjct: 30200 gcctaagaggaaagaagaggttgtcagatcct 30231
>gb|AC060781.8| Mus musculus chromosome 19, clone RP23-196A19, complete sequence Length = 207702 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagaagagtttgtcagatcc 254 |||||||||||||||||||| Sbjct: 194384 cagaagagtttgtcagatcc 194403
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 attgaacctcatgactatat 307 |||||||||||||||||||| Sbjct: 439347 attgaacctcatgactatat 439366
>gb|AC131064.5| Homo sapiens chromosome 11, clone RP5-950E7, complete sequence Length = 106740 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 actgttttgagaaacttggg 586 |||||||||||||||||||| Sbjct: 31957 actgttttgagaaacttggg 31938
>gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334N23, complete sequence Length = 117000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagaagagtttgtcagatcc 254 |||||||||||||||||||| Sbjct: 70344 cagaagagtttgtcagatcc 70325
>emb|AL591002.9| Human DNA sequence from clone RP11-527B17 on chromosome 6 Contains part of gene KIAA0229 for a novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein and a heat shock 10kD protein 1 (chaperonin 10) (HSPE1) pseudogene, complete sequence Length = 76785 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 agagatggcaaattttgcagccagatta 119 |||||||||||||||| ||||| ||||| Sbjct: 40401 agagatggcaaattttacagcctgatta 40428
>ref|XM_503262.1| Yarrowia lipolytica CLIB122, YALI0D25146g predicted mRNA Length = 1152 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caactctgggaaaagagatg 98 |||||||||||||||||||| Sbjct: 937 caactctgggaaaagagatg 918
>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3 histone, family 3B (H3F3B) pseudogene, the BMP15 gene for bone morphogenetic protein 15, and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 125495 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gtcttgactgactttgacag 364 |||||||||||||||||||| Sbjct: 102797 gtcttgactgactttgacag 102816
>gb|AY321443.1| Glycine max glycinamide ribonucleotide transformylase (pur3) gene, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgaagttggatcctccacca 438 |||||||||||||||||||| Sbjct: 781 tgaagttggatcctccacca 762
>gb|AY321442.1| Glycine max glycinamide ribonucleotide transformylase (pur3) pseudogene, complete sequence Length = 2036 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgaagttggatcctccacca 438 |||||||||||||||||||| Sbjct: 505 tgaagttggatcctccacca 486
>gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, complete sequence Length = 211677 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 agatccttaggtttggagtt 268 |||||||||||||||||||| Sbjct: 53661 agatccttaggtttggagtt 53642
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.0 Identities = 56/68 (82%) Strand = Plus / Minus Query: 420 gaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaatagtgaa 479 ||||| || ||||| |||||||| ||||| |||| |||||| |||| |||||| ||| Sbjct: 2133916 gaagtcggttcctcgaccatgccgcacaaggtcaaccccatcgacttcgaaaatgccgaa 2133857 Query: 480 ggcaattt 487 |||||||| Sbjct: 2133856 ggcaattt 2133849
>gb|AC005684.2| Homo sapiens chromosome 11p14.4 clone PAC pDJ606K4, complete sequence Length = 143088 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 actgttttgagaaacttggg 586 |||||||||||||||||||| Sbjct: 134365 actgttttgagaaacttggg 134346
>gb|AC012177.6| Homo sapiens chromosome 16 clone RP11-231O22, complete sequence Length = 186687 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gtcaagatactagggaaatt 166 |||||||||||||||||||| Sbjct: 129438 gtcaagatactagggaaatt 129419
>gb|AC127033.11| Homo sapiens chromosome 11, clone RP11-237K1, complete sequence Length = 136544 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 actgttttgagaaacttggg 586 |||||||||||||||||||| Sbjct: 2219 actgttttgagaaacttggg 2238
>gb|AC004081.1|AC004081 Homo sapiens PAC clone RP1-320J15 from Xq23, complete sequence Length = 149409 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttgactgactttgacagaga 367 |||||||||||||||||||| Sbjct: 49979 ttgactgactttgacagaga 49960
>emb|AL133502.4|CNS01DVA Human chromosome 14 DNA sequence BAC R-180L10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aaaatcaatcccatcaactt 466 |||||||||||||||||||| Sbjct: 139901 aaaatcaatcccatcaactt 139882
>emb|AL159140.4|CNS01RGP Human chromosome 14 DNA sequence BAC R-131E8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164452 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aaaatcaatcccatcaactt 466 |||||||||||||||||||| Sbjct: 1763 aaaatcaatcccatcaactt 1744
>gb|AC158988.3| Mus musculus BAC clone RP23-393E16 from chromosome 14, complete sequence Length = 209710 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 acctcatgactatatctcaa 312 |||||||||||||||||||| Sbjct: 77753 acctcatgactatatctcaa 77772
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.0 Identities = 56/68 (82%) Strand = Plus / Minus Query: 420 gaagttggatcctccaccatgcctcacaaaatcaatcccatcaactttgaaaatagtgaa 479 ||||| || ||||| |||||||| ||||| |||| |||||| |||| |||||| ||| Sbjct: 2153818 gaagtcggttcctcgaccatgccgcacaaggtcaaccccatcgacttcgaaaatgccgaa 2153759 Query: 480 ggcaattt 487 |||||||| Sbjct: 2153758 ggcaattt 2153751
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete sequence Length = 221351 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ggcctaagatgacagaagag 242 |||||||||||||||||||| Sbjct: 104890 ggcctaagatgacagaagag 104871
>gb|AC005320.1|AC005320 Human Chromosome 11p14.3 PAC clone pDJ950e7, complete sequence Length = 106729 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 actgttttgagaaacttggg 586 |||||||||||||||||||| Sbjct: 31951 actgttttgagaaacttggg 31932
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 caactctgggaaaagagatg 98 |||||||||||||||||||| Sbjct: 3353932 caactctgggaaaagagatg 3353913
>emb|AL645854.10| Mouse DNA sequence from clone RP23-192P17 on chromosome 11, complete sequence Length = 211829 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 agcaggccacttcaagcaga 405 |||||||||||||||||||| Sbjct: 64409 agcaggccacttcaagcaga 64428
>emb|AL806530.6| Mouse DNA sequence from clone RP23-152B24 on chromosome 4, complete sequence Length = 85718 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ggacagccagcatcaccaac 79 |||||||||||||||||||| Sbjct: 5910 ggacagccagcatcaccaac 5929
>emb|AL627394.15| Mouse DNA sequence from clone RP23-174I9 on chromosome 4, complete sequence Length = 116283 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 aactttgaaaatagtgaaggcaatttta 489 ||||| |||||||||||| ||||||||| Sbjct: 63930 aacttagaaaatagtgaatgcaatttta 63903
>emb|AL671918.5| Mouse DNA sequence from clone RP23-172E13 on chromosome X, complete sequence Length = 121205 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tgggaaaagagatggcaaat 104 |||||||||||||||||||| Sbjct: 44142 tgggaaaagagatggcaaat 44123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,192,209 Number of Sequences: 3902068 Number of extensions: 6192209 Number of successful extensions: 115280 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114834 Number of HSP's gapped (non-prelim): 442 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)