ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104770.1| Zea mays PCO074909 mRNA sequence Length = 3628 Score = 325 bits (164), Expect = 7e-86 Identities = 239/264 (90%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagtttac 212 ||||| |||||||||||||| || |||||||| |||||||||||||||||||||| ||| Sbjct: 2043 gttgatattgattttgagaaagagcccattggatttggaaaggatggcaaggaagtctac 2102 Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 |||||||||||||||||| | || || |||||||| ||||||| ||||||||||||||| Sbjct: 2103 ttcagggatatatggccctcgacagaagaaattgcgcaggttgtccaatccagtgtgctg 2162 Query: 273 cctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaaccag 332 ||||||||||||| | |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 2163 cctgacatgttcaagggcacctatgaggctatcacaaaaggcaacccaatgtggaaccag 2222 Query: 333 cttcctgtcccagaagcatcgctctactcatgggattcaaactccacttacatccatgag 392 || |||||||||||||||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 2223 ctaactgtcccagaagcatcactctactcatgggattccaaatccacttacattcatgag 2282 Query: 393 cccccctacttcaaggacatgacc 416 ||||| ||||| |||||||||||| Sbjct: 2283 cccccttactttaaggacatgacc 2306 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||| || |||||||| || ||||| |||||||| ||||||||||| || ||||| Sbjct: 1989 gctaactatcttgcttcgccacctcttgttgttgcttatgcacttgccggaactgt 2044
>gb|BT024088.1| Zea mays clone EL01N0553G09 mRNA sequence Length = 1988 Score = 311 bits (157), Expect = 1e-81 Identities = 239/265 (90%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagtttac 212 ||||| |||||||||||||| || |||||||| |||||||||||||||||||||| ||| Sbjct: 654 gttgatattgattttgagaaagagcccattggatttggaaaggatggcaaggaagtctac 713 Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 |||||||||||||||||| | || || |||||||| ||||||| ||||||||||||||| Sbjct: 714 ttcagggatatatggccctcgacagaagaaattgcgcaggttgtccaatccagtgtgctg 773 Query: 273 cctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaa-cca 331 ||||||||||||| | |||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 774 cctgacatgttcaagggcacctatgaggctatcacaaaaggcaacccaatgtggaaccca 833 Query: 332 gcttcctgtcccagaagcatcgctctactcatgggattcaaactccacttacatccatga 391 ||| |||||||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 834 gctaactgtcccagaagcatcactctactcatgggattccaaatccacttacattcatga 893 Query: 392 gcccccctacttcaaggacatgacc 416 |||||| ||||| |||||||||||| Sbjct: 894 gcccccttactttaaggacatgacc 918 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||| || |||||||| || ||||| |||||||| ||||||||||| || ||||| Sbjct: 600 gctaactatcttgcttcgccacctcttgttgttgcttatgcacttgccggaactgt 655
>ref|XM_480473.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2697 Score = 214 bits (108), Expect = 2e-52 Identities = 225/264 (85%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagtttac 212 |||||||||||||||||||| || || ||||| |||||||||||||| || ||||| | | Sbjct: 1708 gttgacattgattttgagaaagagccgattggagttggaaaggatggtaaagaagtcttc 1767 Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 |||||||| ||||||||| ||||||| |||||||| || || || ||||| || || ||| Sbjct: 1768 ttcagggacatatggccctcaactgaagaaattgcagaagtggtccaatctagcgtactg 1827 Query: 273 cctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaaccag 332 ||||| ||||||| || ||||| ||||| || |||||||||||||| |||||||| ||| Sbjct: 1828 cctgatatgttcaaaagtacatacgaggctattacaaaaggcaacccgatgtggaatcag 1887 Query: 333 cttcctgtcccagaagcatcgctctactcatgggattcaaactccacttacatccatgag 392 || | || || |||||||||||||| || |||||| |||||||||| |||||||||||| Sbjct: 1888 ctgaccgtgcccgaagcatcgctctattcgtgggatccaaactccacctacatccatgag 1947 Query: 393 cccccctacttcaaggacatgacc 416 || || ||||| |||||||||||| Sbjct: 1948 cctccatactttaaggacatgacc 1971 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1654 gctaattaccttgcttcaccgcctcttgtggttgcatatgcacttgctggcactgt 1709
>gb|BT016334.1| Zea mays clone Contig167 mRNA sequence Length = 1269 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 265 gtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgt 324 ||||||||||||||||||||| | |||| |||||||| |||||||||||||||||||||| Sbjct: 10 gtgtgctgcctgacatgttcaagggcacctatgaggctatcacaaaaggcaacccaatgt 69 Query: 325 ggaaccagcttcctgtcccagaagcatcgctctactcatgggattcaaactccacttaca 384 |||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 70 ggaaccagctaactgtcccagaagcatcactctactcatgggattccaaatccacttaca 129 Query: 385 tccatgagcccccctacttcaaggacatgacc 416 | ||||||||||| ||||| |||||||||||| Sbjct: 130 ttcatgagcccccttactttaaggacatgacc 161
>emb|X97012.1|STRNAAAH S.tuberosum mRNA for aconitase/aconitate hydratase Length = 2120 Score = 139 bits (70), Expect = 8e-30 Identities = 127/146 (86%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagtttac 212 ||||| || ||||||||||| || || ||||| || ||||||||||| ||||| || ||| Sbjct: 862 gttgatatagattttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtac 921 Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| || Sbjct: 922 ttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattg 981 Query: 273 cctgacatgttcaggagcacatatga 298 || |||||||||| ||| |||||||| Sbjct: 982 ccagacatgttcaagagtacatatga 1007 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 10 cttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||||||||| || |||| ||||| ||||| |||||||||||||| Sbjct: 817 cttgcttcacctcccttggtggttgcctatgctcttgctggcactgt 863
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 140 ttgtacttttcaggttgacattgattttgagaaggaacccattggtgttggaaaggatgg 199 ||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 5323180 ttgtacttttcaggttgacattgattttgagaaagagccgattggagttggaaaggatgg 5323121 Query: 200 caaggaagtttacttcagggatatatggcccacaactgaggaaattgc 247 || ||||| | ||||||||| ||||||||| ||||||| |||||||| Sbjct: 5323120 taaagaagtcttcttcagggacatatggccctcaactgaagaaattgc 5323073 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 270 ctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaac 329 |||||||| ||||||| || ||||| ||||| || |||||||||||||| |||||||| Sbjct: 5322924 ctgcctgatatgttcaaaagtacatacgaggctattacaaaaggcaacccgatgtggaat 5322865 Query: 330 cagcttcctgtcccagaagcatcgctctactcatgggattcaaactccacttacatccat 389 ||||| | || || |||||||||||||| || |||||| |||||||||| ||||||||| Sbjct: 5322864 cagctgaccgtgcccgaagcatcgctctattcgtgggatccaaactccacctacatccat 5322805 Query: 390 gagcccccctacttcaaggacatgacc 416 ||||| || ||||| |||||||||||| Sbjct: 5322804 gagcctccatactttaaggacatgacc 5322778 Score = 103 bits (52), Expect = 4e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgtaagt 60 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5323359 gctaattaccttgcttcaccgcctcttgtggttgcatatgcacttgctggcactgtaagt 5323300
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 127 bits (64), Expect = 3e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 140 ttgtacttttcaggttgacattgattttgagaaggaacccattggtgttggaaaggatgg 199 ||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 114768 ttgtacttttcaggttgacattgattttgagaaagagccgattggagttggaaaggatgg 114709 Query: 200 caaggaagtttacttcagggatatatggcccacaactgaggaaattgc 247 || ||||| | ||||||||| ||||||||| ||||||| |||||||| Sbjct: 114708 taaagaagtcttcttcagggacatatggccctcaactgaagaaattgc 114661 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 270 ctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaac 329 |||||||| ||||||| || ||||| ||||| || |||||||||||||| |||||||| Sbjct: 114512 ctgcctgatatgttcaaaagtacatacgaggctattacaaaaggcaacccgatgtggaat 114453 Query: 330 cagcttcctgtcccagaagcatcgctctactcatgggattcaaactccacttacatccat 389 ||||| | || || |||||||||||||| || |||||| |||||||||| ||||||||| Sbjct: 114452 cagctgaccgtgcccgaagcatcgctctattcgtgggatccaaactccacctacatccat 114393 Query: 390 gagcccccctacttcaaggacatgacc 416 ||||| || ||||| |||||||||||| Sbjct: 114392 gagcctccatactttaaggacatgacc 114366 Score = 103 bits (52), Expect = 4e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgtaagt 60 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 114947 gctaattaccttgcttcaccgcctcttgtggttgcatatgcacttgctggcactgtaagt 114888
>gb|AY250115.1| Lycopersicon pennellii aconitase mRNA, partial cds Length = 2694 Score = 123 bits (62), Expect = 5e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 165 tttgagaaggaacccattggtgttggaaaggatggcaaggaagtttacttcagggatata 224 |||||||| || || ||||| || || |||||||| ||||| || ||||||||||||||| Sbjct: 1720 tttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatata 1779 Query: 225 tggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctgacatgttc 284 ||||| ||||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1780 tggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttc 1839 Query: 285 aggagcacatatga 298 | ||| |||||||| Sbjct: 1840 aagagtacatatga 1853 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 10 cttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||||||||| || |||| ||||| ||||| |||||||||||||| Sbjct: 1663 cttgcttcacctcccttggtggttgcctatgctcttgctggcactgt 1709
>gb|AY250116.1| Lycopersicon pennellii aconitase mRNA, partial cds Length = 2694 Score = 123 bits (62), Expect = 5e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 165 tttgagaaggaacccattggtgttggaaaggatggcaaggaagtttacttcagggatata 224 |||||||| || || ||||| || || |||||||| ||||| || ||||||||||||||| Sbjct: 1720 tttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatata 1779 Query: 225 tggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctgacatgttc 284 ||||| ||||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1780 tggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttc 1839 Query: 285 aggagcacatatga 298 | ||| |||||||| Sbjct: 1840 aagagtacatatga 1853 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 10 cttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||||||||| || |||| ||||| ||||| |||||||||||||| Sbjct: 1663 cttgcttcacctcccttggtggttgcctatgctcttgctggcactgt 1709
>dbj|D29629.1|CUCACO Cucurbita cv. Kurokawa Amakuri mRNA for aconitase, complete cds Length = 3145 Score = 119 bits (60), Expect = 8e-24 Identities = 150/180 (83%) Strand = Plus / Plus Query: 152 ggttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagttta 211 |||||| ||||| ||||||||||| || ||||| || |||||||| ||||| || || Sbjct: 1946 ggttgatattgactttgagaaggagccaattggaaaagggaaggatggaaaggatgtcta 2005 Query: 212 cttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgct 271 ||||||||||| ||||| | || || ||||| ||||||||||||||||||||||| | Sbjct: 2006 tttcagggatatctggccgtcgacagaagaaatagctgaggttgttcaatccagtgtatt 2065 Query: 272 gcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaacca 331 |||||||||||||| ||||| ||||| | || |||||||| ||||||||||||||||| Sbjct: 2066 gcctgacatgttcaaaagcacttatgaatctattacaaaaggaaacccaatgtggaacca 2125
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 tcaggttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagt 208 |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 11288999 tcaggttgacattgattttgagaaagaacccattggacatggaaaggatggcaatgaagt 11289058 Query: 209 ttacttcagggatatatggcccacaa 234 |||||| ||||| ||||||||||||| Sbjct: 11289059 ttacttgagggacatatggcccacaa 11289084 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgtaagt 60 |||||||||||||| || || |||||||||||||| ||||| |||||||||||||||||| Sbjct: 11288688 gctaattaccttgcctcgccacctctggttgttgcctatgcccttgctggcactgtaagt 11288747 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||| ||||||||||||| ||| ||||||||| Sbjct: 11289455 aggttgtgaaatccagtgtgctacctcacatgttca 11289490
>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1435D02 Length = 131152 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 tcaggttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagt 208 |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 104298 tcaggttgacattgattttgagaaagaacccattggacatggaaaggatggcaatgaagt 104357 Query: 209 ttacttcagggatatatggcccacaa 234 |||||| ||||| ||||||||||||| Sbjct: 104358 ttacttgagggacatatggcccacaa 104383 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgtaagt 60 |||||||||||||| || || |||||||||||||| ||||| |||||||||||||||||| Sbjct: 103987 gctaattaccttgcctcgccacctctggttgttgcctatgcccttgctggcactgtaagt 104046 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||| ||||||||||||| ||| ||||||||| Sbjct: 104754 aggttgtgaaatccagtgtgctacctcacatgttca 104789
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0042E12 Length = 164688 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 tcaggttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagt 208 |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 163821 tcaggttgacattgattttgagaaagaacccattggacatggaaaggatggcaatgaagt 163880 Query: 209 ttacttcagggatatatggcccacaa 234 |||||| ||||| ||||||||||||| Sbjct: 163881 ttacttgagggacatatggcccacaa 163906 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgtaagt 60 |||||||||||||| || || |||||||||||||| ||||| |||||||||||||||||| Sbjct: 163510 gctaattaccttgcctcgccacctctggttgttgcctatgcccttgctggcactgtaagt 163569 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||| ||||||||||||| ||| ||||||||| Sbjct: 164277 aggttgtgaaatccagtgtgctacctcacatgttca 164312
>gb|AF073507.1|AF073507 Citrus limon aconitase-iron regulated protein 1 (IRP1) mRNA, complete cds Length = 3401 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaacccattggtgttggaaaggatggcaaggaagtttac 212 |||||||| || ||||| ||||| || ||||| ||| || ||||| |||| |||||| Sbjct: 2162 gttgacatagactttgaaaaggagccaattggaactgggaaagatggaaagggtgtttac 2221 Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 || | |||||||||||||| | ||| |||||||| |||||||||||||| || || | Sbjct: 2222 tttaaggatatatggcccagtaatgaagaaattgcagaggttgttcaatctagcgtctta 2281 Query: 273 cctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaaccag 332 ||||||||||||| ||| || |||||||| |||||||| |||||||| |||||||| ||| Sbjct: 2282 cctgacatgttcaagagtacttatgaggctatcacaaagggcaaccctatgtggaatcag 2341 Query: 333 ct 334 || Sbjct: 2342 ct 2343
>dbj|AK067183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L01, full insert sequence Length = 3231 Score = 101 bits (51), Expect = 2e-18 Identities = 211/259 (81%), Gaps = 4/259 (1%) Strand = Plus / Plus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| ||||| ||||||||||| Sbjct: 2006 attgattttgagaaagaaccaattggcatctcgaaag-atgggaaggaggtttacttcag 2064 Query: 218 ggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctga 277 ||| || ||||| | ||||| || ||||||||||||||| |||| |||||||| ||||| Sbjct: 2065 ggacatctggccttccactgaagagattgctgaggttgttaaatcaagtgtgctacctga 2124 Query: 278 catgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaaccagcttcc 337 |||||| | ||||||||| ||||| || || ||||| || || |||||||| |||| | Sbjct: 2125 catgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgagctgtc 2184 Query: 338 tgtcccag-aagcatcgctctactcatgggattcaaactccacttacatccatgagcccc 396 ||| ||| ||||| | |||||| ||||||| | | || ||||||||||||||||| | Sbjct: 2185 tgtatcagcaagca-ctctctacccatgggacccgacatctacttacatccatgagcctc 2243 Query: 397 cctacttcaaggacatgac 415 | || |||||||| ||||| Sbjct: 2244 cttatttcaaggatatgac 2262
>gb|AF194945.1|AF194945 Nicotiana tabacum cytosolic aconitase (ACO) mRNA, complete cds Length = 3025 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 165 tttgagaaggaacccattggtgttggaaaggatggcaaggaagtttacttcagggatata 224 |||||||| || || ||||| || ||||| ||||| ||| | || ||||||| |||||| Sbjct: 1758 tttgagaaagagccaattggagtgggaaatgatggtaagaatgtctacttcaaggatatt 1817 Query: 225 tggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctgacatgttc 284 ||||| ||||||| ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1818 tggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttc 1877 Query: 285 aggagcacatatga 298 | ||| || ||||| Sbjct: 1878 aagagtacctatga 1891 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 7 taccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 |||||||||||||| ||| |||| ||||| |||||||| ||||||||||| Sbjct: 1698 taccttgcttcacctcctttggtggttgcctatgcactcgctggcactgt 1747
>ref|NM_126589.2| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT2G05710 mRNA, complete cds Length = 3493 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcccacaactgaggaaattgct 248 |||||| |||||||||| || | ||| || ||||| ||||| || || || ||||||||| Sbjct: 2212 ggaaagaatggcaaggacgtcttcttaagagatatctggccaaccacggaagaaattgct 2271 Query: 249 gaggttgttcaatccagtgtgctgcctgacatgttc 284 |||||||||||||||||||| |||||||||||||| Sbjct: 2272 gaggttgttcaatccagtgttttgcctgacatgttc 2307 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 354 ctctactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatg 413 ||||||||||||||| | ||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 2377 ctctactcatgggatcccaactcaacttacattcacgagcctccatacttcaaggacatg 2436 Query: 414 acc 416 ||| Sbjct: 2437 acc 2439
>gb|BT008809.1| Arabidopsis thaliana At2g05710 gene, complete cds Length = 2973 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcccacaactgaggaaattgct 248 |||||| |||||||||| || | ||| || ||||| ||||| || || || ||||||||| Sbjct: 2020 ggaaagaatggcaaggacgtcttcttaagagatatctggccaaccacggaagaaattgct 2079 Query: 249 gaggttgttcaatccagtgtgctgcctgacatgttc 284 |||||||||||||||||||| |||||||||||||| Sbjct: 2080 gaggttgttcaatccagtgttttgcctgacatgttc 2115 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 354 ctctactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatg 413 ||||||||||||||| | ||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 2185 ctctactcatgggatcccaactcaacttacattcacgagcctccatacttcaaggacatg 2244 Query: 414 acc 416 ||| Sbjct: 2245 acc 2247
>gb|AY136414.1| Arabidopsis thaliana cytoplasmic aconitate hydratase (At2g05710) mRNA, complete cds Length = 3372 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcccacaactgaggaaattgct 248 |||||| |||||||||| || | ||| || ||||| ||||| || || || ||||||||| Sbjct: 2186 ggaaagaatggcaaggacgtcttcttaagagatatctggccaaccacggaagaaattgct 2245 Query: 249 gaggttgttcaatccagtgtgctgcctgacatgttc 284 |||||||||||||||||||| |||||||||||||| Sbjct: 2246 gaggttgttcaatccagtgttttgcctgacatgttc 2281 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 354 ctctactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatg 413 ||||||||||||||| | ||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 2351 ctctactcatgggatcccaactcaacttacattcacgagcctccatacttcaaggacatg 2410 Query: 414 acc 416 ||| Sbjct: 2411 acc 2413
>dbj|AK222094.1| Arabidopsis thaliana mRNA for cytoplasmic aconitate hydratase, partial cds, clone: RAFL22-86-H10 Length = 1232 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcccacaactgaggaaattgct 248 |||||| |||||||||| || | ||| || ||||| ||||| || || || ||||||||| Sbjct: 36 ggaaagaatggcaaggacgtcttcttaagagatatctggccaaccacggaagaaattgct 95 Query: 249 gaggttgttcaatccagtgtgctgcctgacatgttc 284 |||||||||||||||||||| |||||||||||||| Sbjct: 96 gaggttgttcaatccagtgttttgcctgacatgttc 131 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 354 ctctactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatg 413 ||||||||||||||| | ||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 201 ctctactcatgggatcccaactcaacttacattcacgagcctccatacttcaaggacatg 260 Query: 414 acc 416 ||| Sbjct: 261 acc 263
>dbj|AK061677.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H07, full insert sequence Length = 1184 Score = 79.8 bits (40), Expect = 6e-12 Identities = 165/204 (80%), Gaps = 2/204 (0%) Strand = Plus / Plus Query: 213 ttcagggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctg 272 |||||||| || ||||| | ||||| || ||||||||||||||| |||| |||||||| Sbjct: 1 ttcagggacatctggccttccactgaagagattgctgaggttgttaaatcaagtgtgcta 60 Query: 273 cctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaaccag 332 ||||||||||| | ||||||||| ||||| || || ||||| || || |||||||| || Sbjct: 61 cctgacatgtttaagagcacatacgaggcaataaccaaaggaaatcctatgtggaatgag 120 Query: 333 cttcctgtcccag-aagcatcgctctactcatgggattcaaactccacttacatccatga 391 || |||| ||| ||||| | |||||| ||||||| | | || |||||||||||||| Sbjct: 121 ctgtctgtatcagcaagca-ctctctacccatgggacccgacatctacttacatccatga 179 Query: 392 gcccccctacttcaaggacatgac 415 ||| || || |||||||| ||||| Sbjct: 180 gcctccttatttcaaggatatgac 203
>gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map mi310, complete sequence Length = 78568 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 354 ctctactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatg 413 ||||||||||||||| | ||||| |||||||| || ||||| || ||||||||||||||| Sbjct: 24071 ctctactcatgggatcccaactcaacttacattcacgagcctccatacttcaaggacatg 24012 Query: 414 acc 416 ||| Sbjct: 24011 acc 24009 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttc 284 ||||||||||||||||||| |||||||||||||| Sbjct: 24175 aggttgttcaatccagtgttttgcctgacatgttc 24141 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcccacaactgaggaaattgct 248 |||||| |||||||||| || | ||| || ||||| ||||| || || || ||||||||| Sbjct: 24315 ggaaagaatggcaaggacgtcttcttaagagatatctggccaaccacggaagaaattgct 24256 Query: 249 gaggt 253 ||||| Sbjct: 24255 gaggt 24251
>gb|AY104403.1| Zea mays PCO068697 mRNA sequence Length = 2273 Score = 69.9 bits (35), Expect = 6e-09 Identities = 139/171 (81%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| || || ||||||||| | Sbjct: 994 attgattttgagaaagaacctattggcatctcgaaag-atgggaaagaggtttacttccg 1052 Query: 218 ggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctga 277 |||| | ||||| |||| || || || || |||||||| | || |||||||| ||||| Sbjct: 1053 ggatgtttggccatcaacagaagagatagccgaggttgtcaagtcaagtgtgcttcctga 1112 Query: 278 catgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtggaa 328 |||||||| ||||||||||||| ||||||| |||| || || |||||||| Sbjct: 1113 catgttcaagagcacatatgagtccatcacccaaggaaatcctatgtggaa 1163 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 381 tacatccatgagcccccctacttcaaggacatgac 415 |||||||||||||| || ||||||||||| ||||| Sbjct: 1216 tacatccatgagcctccttacttcaaggatatgac 1250
>gb|DQ463100.1| Sorghum propinquum putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 592 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 465 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 524 Query: 324 tggaa 328 ||||| Sbjct: 525 tggaa 529
>gb|DQ463099.1| Sorghum bicolor cultivar inbred line PI302233 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463098.1| Sorghum bicolor cultivar inbred line LWA88 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463097.1| Sorghum bicolor cultivar inbred line LWA67 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463096.1| Sorghum bicolor cultivar inbred line LWA63 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463094.1| Sorghum bicolor cultivar inbred line LWA55 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463092.1| Sorghum bicolor cultivar inbred line LWA38 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463091.1| Sorghum bicolor cultivar inbred line LWA29 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463090.1| Sorghum bicolor cultivar inbred line LWA22 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463089.1| Sorghum bicolor cultivar inbred line LWA17 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463088.1| Sorghum bicolor cultivar inbred line LWA15b putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463087.1| Sorghum bicolor cultivar inbred line LWA15a putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463086.1| Sorghum bicolor cultivar inbred line LWA13 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463085.1| Sorghum bicolor cultivar inbred line PI585454 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463084.1| Sorghum bicolor cultivar inbred line PI267539 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463083.1| Sorghum bicolor cultivar inbred line PI267408 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463082.1| Sorghum bicolor cultivar inbred line PI221607 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463081.1| Sorghum bicolor cultivar inbred line PI152702 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463080.1| Sorghum bicolor cultivar inbred line NSL92371 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463079.1| Sorghum bicolor cultivar inbred line NSL87902 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463078.1| Sorghum bicolor cultivar inbred line NSL87666 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463077.1| Sorghum bicolor cultivar inbred line NSL77217 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463076.1| Sorghum bicolor cultivar inbred line NSL77034 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 589 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 462 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 521 Query: 324 tggaa 328 ||||| Sbjct: 522 tggaa 526
>gb|DQ463075.1| Sorghum bicolor cultivar inbred line NSL56174 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463074.1| Sorghum bicolor cultivar inbred line NSL56003 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463073.1| Sorghum bicolor cultivar inbred line NSL55243 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463072.1| Sorghum bicolor cultivar inbred line NSL51365 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 463 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 522 Query: 324 tggaa 328 ||||| Sbjct: 523 tggaa 527
>gb|DQ463071.1| Sorghum bicolor cultivar inbred line NSL51030 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463070.1| Sorghum bicolor cultivar inbred line NSL50875 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 464 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 523 Query: 324 tggaa 328 ||||| Sbjct: 524 tggaa 528
>gb|DQ463069.1| Sorghum bicolor cultivar inbred line BTx623 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 589 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 462 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 521 Query: 324 tggaa 328 ||||| Sbjct: 522 tggaa 526
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 65.9 bits (33), Expect = 1e-07 Identities = 125/153 (81%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 264 agtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatg 323 |||||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||| Sbjct: 94174 agtgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatg 94233 Query: 324 tggaaccagcttcctgtcccag-aagcatcgctctactcatgggattcaaactccactta 382 ||||| |||| | ||| || ||||| | |||||| | |||||| ||| || || || Sbjct: 94234 tggaatgagctctcagtctcaacaagca-ctctctacccctgggatccaacatctacata 94292 Query: 383 catccatgagcccccctacttcaaggacatgac 415 |||||||||||| || ||||||||||| ||||| Sbjct: 94293 catccatgagcctccttacttcaaggatatgac 94325
>gb|AY104037.1| Zea mays PCO139346 mRNA sequence Length = 2256 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||| |||||||| || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 703 gctaactaccttgcctcgccgcctctggttgttgcctatgctcttgccggcactgt 758
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 61.9 bits (31), Expect = 2e-06 Identities = 135/167 (80%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaa 309 |||||||| |||| |||||||| ||||||||||| | ||||||||| ||||| || || | Sbjct: 47444 aggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataacca 47385 Query: 310 aaggcaacccaatgtggaaccagcttcctgtcccag-aagcatcgctctactcatgggat 368 |||| || || |||||||| |||| |||| ||| ||||| | |||||| ||||||| Sbjct: 47384 aaggaaatcctatgtggaatgagctgtctgtatcagcaagca-ctctctacccatgggac 47326 Query: 369 tcaaactccacttacatccatgagcccccctacttcaaggacatgac 415 | | || ||||||||||||||||| || || |||||||| ||||| Sbjct: 47325 ccgacatctacttacatccatgagcctccttatttcaaggatatgac 47279 Score = 50.1 bits (25), Expect = 0.006 Identities = 81/97 (83%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| ||||| ||||||||||| Sbjct: 47647 attgattttgagaaagaaccaattggcatctcgaaag-atgggaaggaggtttacttcag 47589 Query: 218 ggatatatggcccacaactgaggaaattgctgaggtt 254 ||| || ||||| | ||||| || |||||||||||| Sbjct: 47588 ggacatctggccttccactgaagagattgctgaggtt 47552
>gb|DQ463095.1| Sorghum bicolor cultivar inbred line LWA59 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 266 tgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtg 325 |||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||||| Sbjct: 466 tgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatgtg 525 Query: 326 gaa 328 ||| Sbjct: 526 gaa 528
>gb|DQ463093.1| Sorghum bicolor cultivar inbred line LWA42 putative aconitate hydratase 1 gene, exons 16, 17 and partial cds Length = 591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 266 tgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtg 325 |||||| || |||||||||| ||||||||||||| ||||||| ||||| || || ||||| Sbjct: 466 tgtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatgtg 525 Query: 326 gaa 328 ||| Sbjct: 526 gaa 528
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 135/167 (80%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaa 309 |||||||| |||| |||||||| ||||||||||| | ||||||||| ||||| || || | Sbjct: 2008683 aggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataacca 2008624 Query: 310 aaggcaacccaatgtggaaccagcttcctgtcccag-aagcatcgctctactcatgggat 368 |||| || || |||||||| |||| |||| ||| ||||| | |||||| ||||||| Sbjct: 2008623 aaggaaatcctatgtggaatgagctgtctgtatcagcaagca-ctctctacccatgggac 2008565 Query: 369 tcaaactccacttacatccatgagcccccctacttcaaggacatgac 415 | | || ||||||||||||||||| || || |||||||| ||||| Sbjct: 2008564 ccgacatctacttacatccatgagcctccttatttcaaggatatgac 2008518 Score = 50.1 bits (25), Expect = 0.006 Identities = 81/97 (83%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| ||||| ||||||||||| Sbjct: 2008886 attgattttgagaaagaaccaattggcatctcgaaag-atgggaaggaggtttacttcag 2008828 Query: 218 ggatatatggcccacaactgaggaaattgctgaggtt 254 ||| || ||||| | ||||| || |||||||||||| Sbjct: 2008827 ggacatctggccttccactgaagagattgctgaggtt 2008791 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 33864736 aaatttggtcaaagggttgggcttg 33864712
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 135/167 (80%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaa 309 |||||||| |||| |||||||| ||||||||||| | ||||||||| ||||| || || | Sbjct: 2008695 aggttgttaaatcaagtgtgctacctgacatgtttaagagcacatacgaggcaataacca 2008636 Query: 310 aaggcaacccaatgtggaaccagcttcctgtcccag-aagcatcgctctactcatgggat 368 |||| || || |||||||| |||| |||| ||| ||||| | |||||| ||||||| Sbjct: 2008635 aaggaaatcctatgtggaatgagctgtctgtatcagcaagca-ctctctacccatgggac 2008577 Query: 369 tcaaactccacttacatccatgagcccccctacttcaaggacatgac 415 | | || ||||||||||||||||| || || |||||||| ||||| Sbjct: 2008576 ccgacatctacttacatccatgagcctccttatttcaaggatatgac 2008530 Score = 50.1 bits (25), Expect = 0.006 Identities = 81/97 (83%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| ||||| ||||||||||| Sbjct: 2008898 attgattttgagaaagaaccaattggcatctcgaaag-atgggaaggaggtttacttcag 2008840 Query: 218 ggatatatggcccacaactgaggaaattgctgaggtt 254 ||| || ||||| | ||||| || |||||||||||| Sbjct: 2008839 ggacatctggccttccactgaagagattgctgaggtt 2008803 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 33955208 aaatttggtcaaagggttgggcttg 33955184
>gb|AF457945.1| Zea mays clone cen3n.pk0128.b3, mRNA sequence Length = 439 Score = 60.0 bits (30), Expect = 6e-06 Identities = 116/142 (81%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 159 attgattttgagaaggaacccattggtgt-tggaaaggatggcaaggaagtttacttcag 217 |||||||||||||| ||||| ||||| | | ||||| |||| || || ||||||||| | Sbjct: 196 attgattttgagaaagaacctattggaatctcgaaag-atgggaaagaggtttacttccg 254 Query: 218 ggatatatggcccacaactgaggaaattgctgaggttgttcaatccagtgtgctgcctga 277 |||| | ||||| |||| || || || || |||||||| | || |||||||| ||||| Sbjct: 255 ggatgtttggccatcaacagaagagatagccgaggttgtcaagtcaagtgtgcttcctga 314 Query: 278 catgttcaggagcacatatgag 299 |||||||| ||||||||||||| Sbjct: 315 catgttcaagagcacatatgag 336
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggcactgt 56 ||||||||| | || || ||||| || ||||||||||||||||||||||| ||||| Sbjct: 98435 gctaattacttggcatctccgccacttgttgttgcatatgcacttgctggtactgt 98380
>emb|X82840.1|CMACON C.melo mRNA for aconitase (UNI-ZAPxR) Length = 2594 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 7 taccttgcttcaccgcctctggttgttgcatatgcacttgctggcac 53 ||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 1257 taccttgcttctcctcctcttgttgttgcttatgctcttgctggcac 1303
>ref|NM_119749.3| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT4G35830 mRNA, complete cds Length = 3214 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 244 ttgctgaggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 1907 ttgctgaggttgttcaatctagtgtccttcctgatatgttca 1948
>emb|X82839.1|ATACON A.thaliana mRNA for aconitase (ZAPII) Length = 3209 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 244 ttgctgaggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 1866 ttgctgaggttgttcaatctagtgtccttcctgatatgttca 1907
>gb|AY062772.1| Arabidopsis thaliana Unknown protein (At4g35830; F4B14.100) mRNA, complete cds Length = 2908 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 244 ttgctgaggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 1834 ttgctgaggttgttcaatctagtgtccttcctgatatgttca 1875
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1 gctaattaccttgcttcaccgcctctggttgttgcatatgcacttgctggca 52 ||||| ||||||||||| || || || ||||||||||| || |||||||||| Sbjct: 2504496 gctaactaccttgcttcgccaccgctcgttgttgcatacgcgcttgctggca 2504547
>emb|CR932965.2| Medicago truncatula chromosome 5 clone mth2-47e6, COMPLETE SEQUENCE Length = 96647 Score = 46.1 bits (23), Expect = 0.090 Identities = 65/79 (82%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaa 309 ||||||| ||||| ||||||||||| || ||||| ||| |||||| | || || || | Sbjct: 53905 aggttgtacaatcgagtgtgctgcccgatatgtttagggaaacatataatgctattacca 53846 Query: 310 aaggcaacccaatgtggaa 328 |||||||||| |||||||| Sbjct: 53845 aaggcaaccctatgtggaa 53827
>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence Length = 226254 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 tggaaccagcttcctgtcccag 345 |||||||||||||||||||||| Sbjct: 110458 tggaaccagcttcctgtcccag 110479
>gb|AC006712.2| Caenorhabditis elegans cosmid Y119C1B, complete sequence Length = 56772 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 tttctgttgtttttgtgcttttgttg 128 ||||||||||||||||| |||||||| Sbjct: 29826 tttctgttgtttttgtggttttgttg 29801
>ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2167 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 1700 aaatttggtcaaagggttgggcttg 1724
>gb|AF000195.1| Caenorhabditis elegans cosmid C32F10, complete sequence Length = 30102 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 acttttcaggttgacattgat 164 ||||||||||||||||||||| Sbjct: 7643 acttttcaggttgacattgat 7623
>ref|XM_655309.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2797.2), mRNA Length = 4740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 ggaaccagcttcctgtcccag 345 ||||||||||||||||||||| Sbjct: 544 ggaaccagcttcctgtcccag 524
>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence Length = 131049 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcc 229 ||||||||||||||| | |||||||| | |||||| ||||| Sbjct: 88683 ggaaaggatggcaagaatgtttacttgaaggatatttggcc 88723 Score = 40.1 bits (20), Expect = 5.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 258 caatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaac 317 |||| ||| ||| ||||||||||||||| || |||||||| || || || || || ||| Sbjct: 88843 caatacagcgtgttgcctgacatgttcacaagtacatatgaagctattactaagggtaac 88902 Query: 318 ccaatgtggaac 329 || ||||||||| Sbjct: 88903 cctatgtggaac 88914
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 8504 aaatttggtcaaagggttgggcttg 8528
>gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete sequence Length = 78737 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 189 ggaaaggatggcaaggaagtttacttcagggatatatggcc 229 ||||||||||||||| | |||||||| | |||||| ||||| Sbjct: 13298 ggaaaggatggcaagaatgtttacttgaaggatatttggcc 13338 Score = 40.1 bits (20), Expect = 5.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 258 caatccagtgtgctgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaac 317 |||| ||| ||| ||||||||||||||| || |||||||| || || || || || ||| Sbjct: 13458 caatacagcgtgttgcctgacatgttcacaagtacatatgaagctattactaagggtaac 13517 Query: 318 ccaatgtggaac 329 || ||||||||| Sbjct: 13518 cctatgtggaac 13529
>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene, complete cds Length = 309626 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gtacttttcaggttgacattgattt 166 ||||||||||||| ||||||||||| Sbjct: 145084 gtacttttcaggtggacattgattt 145108
>emb|Z73234.1|BC170DEGR B.subtilis DNA (26.2 kb fragment; 170 degree region) Length = 26170 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 10 cttgcttcaccgcctctggttgttgcatatgcacttgctgg 50 |||||||||||||| || ||||| |||||||| || ||||| Sbjct: 10045 cttgcttcaccgccgcttgttgtggcatatgcgctggctgg 10085
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aggttgacattgattttgaga 171 ||||||||||||||||||||| Sbjct: 46368 aggttgacattgattttgaga 46348 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||| ||||| || ||||| ||||||| Sbjct: 46180 aggttgttcaatctagtgtccttcctgatatgttca 46145
>gb|AC055807.11| Homo sapiens chromosome 15, clone RP11-262P8, complete sequence Length = 178201 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gtacttttcaggttgacattgattt 166 ||||||||||||| ||||||||||| Sbjct: 107277 gtacttttcaggtggacattgattt 107301
>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full insert sequence Length = 2169 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 1702 aaatttggtcaaagggttgggcttg 1726
>emb|X82841.1|ATACO A.thaliana Aco gene Length = 6758 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aggttgacattgattttgaga 171 ||||||||||||||||||||| Sbjct: 4713 aggttgacattgattttgaga 4733 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||| ||||| || ||||| ||||||| Sbjct: 4901 aggttgttcaatctagtgtccttcctgatatgttca 4936
>dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C07, full insert sequence Length = 1119 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 762 aaatttggtcaaagggttgggcttg 786
>dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F11, full insert sequence Length = 968 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aaatttggtcaaagggctgggcttg 94 |||||||||||||||| |||||||| Sbjct: 616 aaatttggtcaaagggttgggcttg 640
>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208222 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 tttctgttgtttttgtgcttttgtt 127 ||||||||||||||||| ||||||| Sbjct: 151863 tttctgttgtttttgtggttttgtt 151887
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aggttgacattgattttgaga 171 ||||||||||||||||||||| Sbjct: 38172 aggttgacattgattttgaga 38152 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 250 aggttgttcaatccagtgtgctgcctgacatgttca 285 ||||||||||||| ||||| || ||||| ||||||| Sbjct: 37984 aggttgttcaatctagtgtccttcctgatatgttca 37949
>emb|Z99113.2|BSUB0010 Bacillus subtilis complete genome (section 10 of 21): from 1807106 to 2014934 Length = 207829 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 10 cttgcttcaccgcctctggttgttgcatatgcacttgctgg 50 |||||||||||||| || ||||| |||||||| || ||||| Sbjct: 120473 cttgcttcaccgccgcttgttgtggcatatgcgctggctgg 120513
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 373 actccacttacatccatgagcccccctacttcaaggacatg 413 ||||||| |||||||| |||| || ||||||||||||||| Sbjct: 3364228 actccacctacatccagcagccgccgtacttcaaggacatg 3364268
>gb|AC152111.1| Pichia stipitis clone JGIAHYZ-17L1, complete sequence Length = 38449 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gttgacattgattttgagaa 172 |||||||||||||||||||| Sbjct: 27948 gttgacattgattttgagaa 27929
>gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC1 scRNA gene, complete sequence; hypothetical protein and cyclin D1 (Ccnd1) genes, complete cds Length = 154480 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 7584 aatatttctgttgtttttgt 7603
>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 180339 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 taaaatttgtacttttcaggttgacatt 161 ||||||| ||| |||||||||||||||| Sbjct: 98673 taaaattggtatttttcaggttgacatt 98700
>gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, complete sequence Length = 177888 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctaaaatttgtacttttcag 152 |||||||||||||||||||| Sbjct: 28943 ctaaaatttgtacttttcag 28924
>gb|AC158305.4| Mus musculus chromosome 1, clone RP23-131K23, complete sequence Length = 199641 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ttcaatccagtgtgctgcct 275 |||||||||||||||||||| Sbjct: 176807 ttcaatccagtgtgctgcct 176788
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 166254 aatatttctgttgtttttgt 166235
>gb|AC125111.3| Mus musculus BAC clone RP24-238P2 from chromosome 1, complete sequence Length = 170703 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccagtgtgctgcctgacatg 281 |||||||||||||||||||| Sbjct: 26526 ccagtgtgctgcctgacatg 26545
>gb|AE014308.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 5 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gttgacattgattttgagaaggaa 176 ||||||||||||||| |||||||| Sbjct: 165711 gttgacattgattttcagaaggaa 165688
>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence Length = 204913 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 43920 aatatttctgttgtttttgt 43901
>gb|AC145864.2| Pan troglodytes BAC clone RP43-6L18 from 7, complete sequence Length = 206128 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ctaaaatttgtacttttcag 152 |||||||||||||||||||| Sbjct: 5587 ctaaaatttgtacttttcag 5606
>gb|AC116723.13| Mus musculus chromosome 3, clone RP23-266J14, complete sequence Length = 184835 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ccatcacaaaaggcaaccca 320 |||||||||||||||||||| Sbjct: 77672 ccatcacaaaaggcaaccca 77691
>emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 on chromosome 13 Contains part of the gene for androgen-induced prostate proliferative shutoff associated protein (AS3) (CG008, FLJ23236, KIAA0979) and two CpG islands, complete sequence Length = 113704 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ttgtttttgtgcttttgttg 128 |||||||||||||||||||| Sbjct: 20693 ttgtttttgtgcttttgttg 20712
>emb|AL161897.6| Human DNA sequence from clone RP11-262G14 on chromosome 13, complete sequence Length = 160455 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gttgacattgattttgagaaggaa 176 ||||||||||||||| |||||||| Sbjct: 53002 gttgacattgattttcagaaggaa 52979
>gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202541 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tttgtacttttcaggttgacattg 162 ||||||||||||||||||| |||| Sbjct: 65044 tttgtacttttcaggttgagattg 65067
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gaaccagcttcctgtcccag 345 |||||||||||||||||||| Sbjct: 35978 gaaccagcttcctgtcccag 35959
>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence Length = 221679 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 123368 aatatttctgttgtttttgt 123349
>gb|AC104307.2| Homo sapiens chromosome 3 clone RP11-527M19, complete sequence Length = 182639 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tggcccacaactgaggaaat 244 |||||||||||||||||||| Sbjct: 175651 tggcccacaactgaggaaat 175670
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 271 tgcctgacatgttcaggagcacatatgaggccatcacaaaaggcaacccaatgtgg 326 ||||||||||||||| ||||| |||||| | || ||||| ||||| || |||||| Sbjct: 106743 tgcctgacatgttcaagagcatttatgagactattacaaagggcaatcctatgtgg 106688
>dbj|AB236788.1| Trifolium pratense RNA for putative cytoplasmic aconitate hydratase, partial cds, clone: C1842 Length = 1248 Score = 40.1 bits (20), Expect = 5.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 357 tactcatgggattcaaactccacttacatccatgagcccccctacttcaaggacatgacc 416 ||||||||||| | ||||| || || || || ||||| || |||||||||||||||||| Sbjct: 163 tactcatgggaccccaactcaacatatattcacgagcctccatacttcaaggacatgacc 222
>gb|AC097356.2| Homo sapiens chromosome 3 clone RP11-107K23, complete sequence Length = 147267 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tggcccacaactgaggaaat 244 |||||||||||||||||||| Sbjct: 33576 tggcccacaactgaggaaat 33595
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gttgtttttgtgcttttgtt 127 |||||||||||||||||||| Sbjct: 102814 gttgtttttgtgcttttgtt 102833
>gb|AC020891.8|AC020891 Homo sapiens chromosome 15 clone RP11-108K3 map 15q21, complete sequence Length = 144714 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttctgttgtttttgtgcttt 123 |||||||||||||||||||| Sbjct: 94702 ttctgttgtttttgtgcttt 94683
>gb|AC009363.4|AC009363 Homo sapiens chromosome 14 clone CTD-2317F5 map 14q24.3, complete sequence Length = 82707 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 50142 aatatttctgttgtttttgt 50123
>gb|AC007182.3|AC007182 Homo sapiens chromosome 14 clone BAC 507E23 map 14q24.3, complete sequence Length = 192389 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aatatttctgttgtttttgt 118 |||||||||||||||||||| Sbjct: 6070 aatatttctgttgtttttgt 6051
>emb|Z93104.1|MAZ93104 M.acuminata mRNA; clone pBAN UU91 Length = 770 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 153 gttgacattgattttgagaaggaaccca 180 ||||||||||||||||| || ||||||| Sbjct: 478 gttgacattgattttgaaaaagaaccca 505
>gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, complete sequence Length = 209705 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ttcaatccagtgtgctgcct 275 |||||||||||||||||||| Sbjct: 188709 ttcaatccagtgtgctgcct 188728
>emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on chromosome 13, complete sequence Length = 120652 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ttgtttttgtgcttttgttg 128 |||||||||||||||||||| Sbjct: 39838 ttgtttttgtgcttttgttg 39857
>gb|AC163626.5| Mus musculus BAC clone RP23-137D2 from chromosome 1, complete sequence Length = 219189 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccagtgtgctgcctgacatg 281 |||||||||||||||||||| Sbjct: 112160 ccagtgtgctgcctgacatg 112179 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,184,097 Number of Sequences: 3902068 Number of extensions: 4184097 Number of successful extensions: 101646 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101096 Number of HSP's gapped (non-prelim): 548 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
