Clone Information

BLAST Search Result

Clone Name	bags15k23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)	253	3e-67
2	RS9_RAT (P29314) 40S ribosomal protein S9	247	2e-65
3	RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9	247	2e-65
4	RS9_HUMAN (P46781) 40S ribosomal protein S9	247	2e-65
5	RS9_DROME (P55935) 40S ribosomal protein S9	245	5e-65
6	RS9B_SCHPO (O59675) 40S ribosomal protein S9-B	239	5e-63
7	RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A	238	8e-63
8	RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP2...	236	2e-62
9	RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP2...	235	5e-62
10	RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal prote...	234	9e-62
11	RS9_CAEEL (Q20228) 40S ribosomal protein S9	229	3e-60
12	RS9_TRYBB (P17959) Probable 40S ribosomal protein S9	224	9e-59
13	RS9_NAEFO (Q25555) 40S ribosomal protein S9	206	3e-53
14	RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)	172	6e-43
15	RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)	165	7e-41
16	RS4_METJA (P54020) 30S ribosomal protein S4P	122	9e-28
17	RS4_METKA (Q8TVC0) 30S ribosomal protein S4P	121	1e-27
18	RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P	118	1e-26
19	RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P	117	3e-26
20	RS4_PYRHO (O59306) 30S ribosomal protein S4P	114	2e-25
21	RS4_PYRFU (P61993) 30S ribosomal protein S4P	113	3e-25
22	RS4_PYRAB (P61992) 30S ribosomal protein S4P	113	3e-25
23	RS4_AERPE (Q9YB58) 30S ribosomal protein S4P	113	4e-25
24	RS4_THEVO (Q97B95) 30S ribosomal protein S4P	113	4e-25
25	RS4_SULTO (Q96YV8) 30S ribosomal protein S4P	109	4e-24
26	RS4_SULAC (P39467) 30S ribosomal protein S4P	109	4e-24
27	RS4_SULSO (P95987) 30S ribosomal protein S4P	109	6e-24
28	RS4_ARCFU (O28000) 30S ribosomal protein S4P	108	1e-23
29	RS4_METBF (Q46GC8) 30S ribosomal protein S4P	107	2e-23
30	RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)	107	3e-23
31	RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P	105	8e-23
32	RS4_METTH (O26142) 30S ribosomal protein S4P	99	1e-20
33	RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P	98	1e-20
34	RS4_METMP (Q6LXN0) 30S ribosomal protein S4P	98	1e-20
35	RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P	97	2e-20
36	RS4_METMA (Q8PV18) 30S ribosomal protein S4P	96	7e-20
37	RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P	95	1e-19
38	RS4_METAC (Q8TRR1) 30S ribosomal protein S4P	94	2e-19
39	RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P	93	6e-19
40	RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)	91	2e-18
41	IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein...	70	5e-12
42	IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein...	69	7e-12
43	IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein...	65	2e-10
44	YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like	53	5e-07
45	IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein...	50	5e-06
46	RS4_PELCD (Q3A6M1) 30S ribosomal protein S4	49	7e-06
47	RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A	49	9e-06
48	RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4	49	1e-05
49	IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein...	48	2e-05
50	RS4_FUSNN (Q8RE43) 30S ribosomal protein S4	48	2e-05
51	RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4	47	4e-05
52	RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4	47	5e-05
53	RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4	47	5e-05
54	RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)	46	6e-05
55	RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4	46	6e-05
56	RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4	46	8e-05
57	RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4	46	8e-05
58	RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4	46	8e-05
59	RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4	46	8e-05
60	RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4	45	1e-04
61	RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
62	RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
63	RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
64	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	45	1e-04
65	RS4_DESPS (Q6AP44) 30S ribosomal protein S4	45	1e-04
66	RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
67	RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4	45	1e-04
68	RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4	45	1e-04
69	RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4	45	1e-04
70	RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
71	RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B	45	1e-04
72	RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4	45	1e-04
73	RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
74	RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
75	RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
76	RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
77	RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
78	RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
79	RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
80	RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
81	RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
82	RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
83	RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
84	RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
85	RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
86	RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
87	RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
88	RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
89	RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4	45	2e-04
90	RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4	45	2e-04
91	RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4	45	2e-04
92	RS4_BACTN (Q8A4A1) 30S ribosomal protein S4	44	2e-04
93	RS4_BACFR (Q64NN4) 30S ribosomal protein S4	44	2e-04
94	RS4_BACFN (Q5L8D5) 30S ribosomal protein S4	44	2e-04
95	RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4	44	2e-04
96	RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4	44	2e-04
97	RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4	44	2e-04
98	RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4	44	2e-04
99	RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4	44	2e-04
100	RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4	44	2e-04
101	RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4	44	2e-04
102	RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4	44	2e-04
103	RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)	44	2e-04
104	RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)	44	2e-04
105	RT04_RECAM (O21263) Mitochondrial ribosomal protein S4	44	2e-04
106	RS4_STRCO (Q9KXP5) 30S ribosomal protein S4	44	2e-04
107	RS4_STRAW (Q827S7) 30S ribosomal protein S4	44	3e-04
108	RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
109	RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
110	RR4_OROMI (O78678) Plastid 30S ribosomal protein S4	44	3e-04
111	RS4_PORGI (Q7MTN9) 30S ribosomal protein S4	44	3e-04
112	RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4	44	3e-04
113	RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4	44	3e-04
114	RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4	44	3e-04
115	RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4	44	3e-04
116	RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4	44	3e-04
117	RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4	44	3e-04
118	RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4	44	3e-04
119	RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4	44	3e-04
120	RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4	44	3e-04
121	RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4	44	3e-04
122	RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4	44	4e-04
123	RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)	44	4e-04
124	RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)	44	4e-04
125	RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
126	RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4	43	5e-04
127	RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
128	RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
129	RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
130	RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
131	RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
132	RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
133	RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
134	RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
135	RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
136	RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
137	RS4_THEFY (Q47R66) 30S ribosomal protein S4	43	5e-04
138	RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4	43	5e-04
139	RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4	43	5e-04
140	RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4	43	7e-04
141	RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4	43	7e-04
142	RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
143	RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
144	RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
145	RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
146	RS4_STAS1 (Q49YF2) 30S ribosomal protein S4	43	7e-04
147	RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4	43	7e-04
148	RS4_GEOKA (Q5KW49) 30S ribosomal protein S4	43	7e-04
149	RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
150	RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
151	RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
152	RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
153	RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
154	RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
155	RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
156	RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
157	RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
158	RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
159	RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
160	RS4_LACAC (Q5FKX2) 30S ribosomal protein S4	43	7e-04
161	RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4	43	7e-04
162	RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4	43	7e-04
163	RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
164	RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
165	RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
166	RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
167	RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
168	RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
169	RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
170	RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
171	RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
172	RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
173	RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4	43	7e-04
174	RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4	43	7e-04
175	RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic p...	43	7e-04
176	RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4	43	7e-04
177	RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4	43	7e-04
178	RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4	43	7e-04
179	RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
180	RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
181	RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4	42	9e-04
182	RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4	42	9e-04
183	RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4	42	9e-04
184	RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4	42	9e-04
185	RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4	42	9e-04
186	RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4	42	9e-04
187	RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4	42	9e-04
188	RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4	42	9e-04
189	RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4	42	9e-04
190	RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)	42	9e-04
191	RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4	42	9e-04
192	RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)	42	9e-04
193	RS4_STAAW (P66564) 30S ribosomal protein S4	42	9e-04
194	RS4_STAAS (Q6G8K8) 30S ribosomal protein S4	42	9e-04
195	RS4_STAAR (Q6GFY8) 30S ribosomal protein S4	42	9e-04
196	RS4_STAAN (P66563) 30S ribosomal protein S4	42	9e-04
197	RS4_STAAM (P66562) 30S ribosomal protein S4	42	9e-04
198	RS4_STAAC (Q5HF54) 30S ribosomal protein S4	42	9e-04
199	RS4_STAAB (Q2YTH0) 30S ribosomal protein S4	42	9e-04
200	RS4_THET8 (P80373) 30S ribosomal protein S4	42	0.001
201	RS4_THET2 (P62664) 30S ribosomal protein S4	42	0.001
202	RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4	42	0.001
203	RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
204	RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
205	RS4_PELLD (Q3B6D7) 30S ribosomal protein S4	42	0.001
206	RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4	42	0.001
207	RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4	42	0.001
208	RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4	42	0.001
209	RS4_LEGPA (Q5X835) 30S ribosomal protein S4	42	0.001
210	RS4_SYNY3 (P48939) 30S ribosomal protein S4	42	0.001
211	RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4	42	0.001
212	RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4	42	0.001
213	RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4	42	0.001
214	RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4	42	0.001
215	RS4_CORGL (Q8NSV4) 30S ribosomal protein S4	42	0.001
216	RS4_COREF (Q8FS34) 30S ribosomal protein S4	42	0.001
217	RS4_CORAM (Q3S664) 30S ribosomal protein S4	42	0.001
218	RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
219	RS4_LACJO (Q74K05) 30S ribosomal protein S4	42	0.001
220	RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4	42	0.001
221	RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)	42	0.001
222	RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4	42	0.001
223	RS4_GEOSL (Q749B2) 30S ribosomal protein S4	42	0.001
224	RS4_GEOMG (Q39XY0) 30S ribosomal protein S4	42	0.001
225	RS4_BACLD (Q65G42) 30S ribosomal protein S4	42	0.001
226	RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4	41	0.002
227	RS4_LISMF (Q71Z71) 30S ribosomal protein S4	41	0.002
228	RS4_LISIN (Q92BB2) 30S ribosomal protein S4	41	0.002
229	RS4_NITWN (Q3ST14) 30S ribosomal protein S4	41	0.002
230	RS4_THETN (Q8R7Y1) 30S ribosomal protein S4	41	0.002
231	RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4	41	0.002
232	RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4	41	0.002
233	RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4	41	0.002
234	RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4	41	0.002
235	RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4	41	0.002
236	RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4	41	0.002
237	RS4_IDILO (Q5QXV7) 30S ribosomal protein S4	41	0.003
238	RS4_CORJK (Q4JTC1) 30S ribosomal protein S4	41	0.003
239	RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4	41	0.003
240	RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4	41	0.003
241	RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4	41	0.003
242	RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4	41	0.003
243	RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4	41	0.003
244	RS4_TROWT (Q83GC9) 30S ribosomal protein S4	41	0.003
245	RS4_TROW8 (Q83HV1) 30S ribosomal protein S4	41	0.003
246	RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4	41	0.003
247	RS4_STAHJ (Q4L760) 30S ribosomal protein S4	41	0.003
248	RS4_STAES (Q8CS54) 30S ribosomal protein S4	41	0.003
249	RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4	41	0.003
250	RS4_AQUAE (O66484) 30S ribosomal protein S4	40	0.003
251	RS4_OCEIH (P59130) 30S ribosomal protein S4	40	0.003
252	RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4	40	0.003
253	RR4_EQUSY (Q6H9K4) Chloroplast 30S ribosomal protein S4	40	0.003
254	RR4_EQUPT (Q6H9K7) Chloroplast 30S ribosomal protein S4	40	0.003
255	RR4_EQUPA (Q6H9K8) Chloroplast 30S ribosomal protein S4	40	0.003
256	RR4_EQUFL (Q6H9L3) Chloroplast 30S ribosomal protein S4	40	0.003
257	RR4_EQUAR (Q6H9L6) Chloroplast 30S ribosomal protein S4	40	0.003
258	RS4_CORDI (Q6NJ64) 30S ribosomal protein S4	40	0.003
259	RS4_LACPL (Q88UX0) 30S ribosomal protein S4	40	0.003
260	RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4	40	0.003
261	RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4	40	0.003
262	RS4_BACHK (Q6HCM2) 30S ribosomal protein S4	40	0.004
263	RS4_BACCZ (Q633E0) 30S ribosomal protein S4	40	0.004
264	RS4_BACCR (Q817A4) 30S ribosomal protein S4	40	0.004
265	RS4_BACC1 (Q72Z76) 30S ribosomal protein S4	40	0.004
266	RS4_BACAN (Q81KT2) 30S ribosomal protein S4	40	0.004
267	RS4_THIDA (Q3SLM5) 30S ribosomal protein S4	40	0.004
268	RS4B_CLOAB (Q97J08) Putative 30S ribosomal protein S4 B	40	0.004
269	RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4	40	0.004
270	RS4_CHLTE (P59129) 30S ribosomal protein S4	40	0.004
271	RR4_EQUBO (Q6H9L5) Chloroplast 30S ribosomal protein S4	40	0.004
272	RS4_NEIMB (P66561) 30S ribosomal protein S4	40	0.004
273	RS4_NEIMA (P66560) 30S ribosomal protein S4	40	0.004
274	RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4	40	0.004
275	RS4_LACSS (Q38XD6) 30S ribosomal protein S4	40	0.004
276	RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)	40	0.004
277	RR4_ASTLO (P58134) Plastid 30S ribosomal protein S4	40	0.006
278	RS4_NOCFA (Q5Z1L0) 30S ribosomal protein S4	40	0.006
279	RR4_CYAPA (P48133) Cyanelle 30S ribosomal protein S4	40	0.006
280	RS4_SYNEL (P59134) 30S ribosomal protein S4	40	0.006
281	RR4_JAMAU (Q9M4B8) Chloroplast 30S ribosomal protein S4	40	0.006
282	RR4_PSEAK (Q3ZJ39) Chloroplast 30S ribosomal protein S4	40	0.006
283	RR4_EUGGR (P27418) Chloroplast 30S ribosomal protein S4	40	0.006
284	RR4_CHAGL (Q8M9W2) Chloroplast 30S ribosomal protein S4	40	0.006
285	RS4_DESVH (Q72CF5) 30S ribosomal protein S4	40	0.006
286	RS4B_CLOPE (Q8XHW7) Putative 30S ribosomal protein S4 B	40	0.006
287	RS4_RHOPA (Q6N9G0) 30S ribosomal protein S4 (RRP-S4)	40	0.006
288	RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4	39	0.007
289	RS4_MYCPU (Q98PK6) 30S ribosomal protein S4	39	0.007
290	RS4_COLP3 (Q488Y9) 30S ribosomal protein S4	39	0.007
291	RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4	39	0.007
292	RS4_MYCTU (O06325) 30S ribosomal protein S4	39	0.010
293	RS4_MYCLE (Q9X799) 30S ribosomal protein S4	39	0.010
294	RR4_TAKLE (P59150) Chloroplast 30S ribosomal protein S4	39	0.010
295	RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4	39	0.010
296	RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4	39	0.010
297	RS4_MYCBO (P45811) 30S ribosomal protein S4	39	0.010
298	RS4_NITOC (Q3J8T7) 30S ribosomal protein S4	39	0.012
299	RS4_BACSK (Q5WEB9) 30S ribosomal protein S4	39	0.012
300	RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)	39	0.012
301	RS4_LEPIN (Q9XD10) 30S ribosomal protein S4	39	0.012
302	RS4_LEPIC (Q72NI7) 30S ribosomal protein S4	39	0.012
303	RR4_PROWI (O47032) Plastid 30S ribosomal protein S4	39	0.012
304	RS4_PSEHT (Q3IJJ5) 30S ribosomal protein S4	39	0.012
305	RS4_ANAVT (Q3M534) 30S ribosomal protein S4	39	0.012
306	RS4_ANASP (Q8YTI0) 30S ribosomal protein S4	39	0.012
307	RS4_HELHP (Q7VGC0) 30S ribosomal protein S4	38	0.016
308	RS4_THICR (Q31IV9) 30S ribosomal protein S4	38	0.021
309	RS4_MANSM (Q65QX9) 30S ribosomal protein S4	38	0.021
310	RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4	38	0.021
311	RS4_SILPO (Q5LNM2) 30S ribosomal protein S4	37	0.036
312	RS4_PASMU (Q9CL53) 30S ribosomal protein S4	37	0.036
313	RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4	37	0.036
314	RS4_PROAC (Q6A6R0) 30S ribosomal protein S4	37	0.036
315	RS4_MYCPA (Q73S44) 30S ribosomal protein S4	37	0.036
316	RS4_HAEIN (P44373) 30S ribosomal protein S4	37	0.036
317	RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4	37	0.036
318	YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Frag...	37	0.036
319	RS4_NITMU (Q2YAX3) 30S ribosomal protein S4	37	0.047
320	RS4_BIFLO (P59127) 30S ribosomal protein S4	37	0.047
321	RS4_STRT2 (Q5M255) 30S ribosomal protein S4	37	0.047
322	RS4_STRT1 (Q5LXK5) 30S ribosomal protein S4	37	0.047
323	RS4_DEHSC (Q3ZZP7) 30S ribosomal protein S4	37	0.047
324	RS4_DEHE1 (Q3Z954) 30S ribosomal protein S4	37	0.047
325	RS4_SHEON (P59131) 30S ribosomal protein S4	37	0.047
326	RS4_PSEF5 (Q4K556) 30S ribosomal protein S4	37	0.047
327	RS4_STRMU (P59133) 30S ribosomal protein S4	36	0.062
328	RS4_BRAJA (Q89ID3) 30S ribosomal protein S4	36	0.062
329	RS4_HELPY (P56011) 30S ribosomal protein S4	36	0.062
330	RS4_HELPJ (Q9ZJT4) 30S ribosomal protein S4	36	0.062
331	RS4_COXBU (Q83EQ3) 30S ribosomal protein S4	36	0.081
332	RS4_CLOTE (Q890Q9) 30S ribosomal protein S4	36	0.081
333	RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4	36	0.081
334	RS4_THIDN (Q30TS4) 30S ribosomal protein S4	36	0.081
335	RS4_DEIRA (Q9RSJ7) 30S ribosomal protein S4	36	0.081
336	RS4_LACLA (Q9CIS2) 30S ribosomal protein S4	36	0.081
337	RS4_WIGBR (Q8D1Y9) 30S ribosomal protein S4	36	0.081
338	RS4_MYCS5 (Q4A5T4) 30S ribosomal protein S4	36	0.081
339	RS4_PSEPF (Q3K611) 30S ribosomal protein S4	35	0.11
340	RS4_PSEAE (O52759) 30S ribosomal protein S4	35	0.11
341	RS4_CAUCR (Q9A5D9) 30S ribosomal protein S4	35	0.11
342	RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4	35	0.14
343	RS4_THEMA (Q9X1I3) 30S ribosomal protein S4	35	0.14
344	RS4_AZOSE (Q5P308) 30S ribosomal protein S4	35	0.14
345	RS4_MESFL (Q6F0M9) 30S ribosomal protein S4	35	0.14
346	RS4_MYCHJ (Q4A9B0) 30S ribosomal protein S4	35	0.14
347	RS4_MYCH7 (Q4A7F0) 30S ribosomal protein S4	35	0.14
348	RS4_MYCH2 (Q5ZZW4) 30S ribosomal protein S4	35	0.14
349	RS4_MYCGA (Q7NAV0) 30S ribosomal protein S4	35	0.14
350	RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4	35	0.18
351	RS4_VIBVU (Q8DE62) 30S ribosomal protein S4	35	0.18
352	RS4_VIBF1 (Q5E890) 30S ribosomal protein S4	35	0.18
353	RS4_VIBCH (Q9KP07) 30S ribosomal protein S4	35	0.18
354	RS4_DECAR (Q47J78) 30S ribosomal protein S4	35	0.18
355	RS4_DESDG (Q30Z67) 30S ribosomal protein S4	35	0.18
356	RS4_BORGA (Q660Q7) 30S ribosomal protein S4	35	0.18
357	RS4_GLUOX (Q5FQ27) 30S ribosomal protein S4	35	0.18
358	RS4_PSEU2 (Q4ZMR7) 30S ribosomal protein S4	34	0.23
359	RS4_PSESM (Q889U7) 30S ribosomal protein S4	34	0.23
360	RS4_PSE14 (Q48D60) 30S ribosomal protein S4	34	0.23
361	RS4_GLOVI (Q7NFF4) 30S ribosomal protein S4	34	0.23
362	RS4_BUCAP (P41186) 30S ribosomal protein S4	34	0.23
363	RS4_BORBU (O51560) 30S ribosomal protein S4	34	0.23
364	RS4_STRR6 (P66566) 30S ribosomal protein S4	34	0.23
365	RS4_STRPN (P66565) 30S ribosomal protein S4	34	0.23
366	RS4_STRPM (Q48QN5) 30S ribosomal protein S4	34	0.23
367	RS4_STRP8 (P66569) 30S ribosomal protein S4	34	0.23
368	RS4_STRP6 (Q5X9C7) 30S ribosomal protein S4	34	0.23
369	RS4_STRP3 (P66568) 30S ribosomal protein S4	34	0.23
370	RS4_STRP1 (P66567) 30S ribosomal protein S4	34	0.23
371	RS4_STRA5 (Q8DWS6) 30S ribosomal protein S4	34	0.23
372	RS4_STRA3 (Q8E2M6) 30S ribosomal protein S4	34	0.23
373	RS4_STRA1 (Q3JYG8) 30S ribosomal protein S4	34	0.23
374	RS4_XYLFA (Q9PE53) 30S ribosomal protein S4	34	0.31
375	RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4	33	0.40
376	RS4_RHOS4 (Q3J446) 30S ribosomal protein S4	33	0.40
377	RS4_PSEPK (Q88QL2) 30S ribosomal protein S4	33	0.40
378	RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4	33	0.52
379	RS4_PHOPR (Q6LV92) 30S ribosomal protein S4	33	0.68
380	RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4	33	0.68
381	RS4_TREPA (O83328) 30S ribosomal protein S4	32	1.2
382	BUB1B_HUMAN (O60566) Mitotic checkpoint serine/threonine-protein...	32	1.5
383	RS4_RHOBA (Q7UXM6) 30S ribosomal protein S4	31	2.6
384	RS4_BUCBP (P59491) 30S ribosomal protein S4	31	2.6
385	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	30	5.8
386	LMNA_CHICK (P13648) Lamin-A	29	7.6
387	RT04_MARPO (P26866) Mitochondrial ribosomal protein S4	29	7.6
388	MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich...	29	7.6
389	SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)	29	7.6
390	CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 ...	29	9.9
391	CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3...	29	9.9

>RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)|
          Length = 190

 Score =  253 bits (645), Expect = 3e-67
 Identities = 126/170 (74%), Positives = 148/170 (87%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR AAR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+FEG AL+RR+ R G+L E + KLDYVLAL AE+FL RRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRK 543
           RVLIRQRHIRVG+QIVNVPSF+VR++S+KHIDF+LTSPFGGG  GRV+RK
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRK 173

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>RS9_RAT (P29314) 40S ribosomal protein S9|
          Length = 193

 Score =  247 bits (630), Expect = 2e-65
 Identities = 120/167 (71%), Positives = 144/167 (86%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           RQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRVKRKN
Sbjct: 130 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 176

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>RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9|
          Length = 193

 Score =  247 bits (630), Expect = 2e-65
 Identities = 120/167 (71%), Positives = 144/167 (86%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           RQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRVKRKN
Sbjct: 130 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 176

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>RS9_HUMAN (P46781) 40S ribosomal protein S9|
          Length = 193

 Score =  247 bits (630), Expect = 2e-65
 Identities = 120/167 (71%), Positives = 144/167 (86%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           RQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SP+GGG  GRVKRKN
Sbjct: 130 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 176

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>RS9_DROME (P55935) 40S ribosomal protein S9|
          Length = 195

 Score =  245 bits (626), Expect = 5e-65
 Identities = 120/169 (71%), Positives = 144/169 (85%)
 Frame = +1

Query: 40  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR AAR LLTLDEK+ 
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARV 399
           +R+F+G ALLRR+ R G+L E + KLDYVL L  E+FL RRLQT VFK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 400 LIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           LIRQRHIRV +Q+VN+PSF+VR++S+KHIDFSL SPFGGG  GRVKRKN
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKN 178

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>RS9B_SCHPO (O59675) 40S ribosomal protein S9-B|
          Length = 191

 Score =  239 bits (609), Expect = 5e-63
 Identities = 118/170 (69%), Positives = 141/170 (82%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R   KT+K PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK
Sbjct: 5   RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 64

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT VFK G+AKSIHHA
Sbjct: 65  DPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 124

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRK 543
           RVLI QRHIRVG+QIVNVPSF+VR++++KHIDF+L+SP+GGG  GR KRK
Sbjct: 125 RVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRCKRK 174

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>RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A|
          Length = 190

 Score =  238 bits (607), Expect = 8e-63
 Identities = 118/170 (69%), Positives = 141/170 (82%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R   KT+K PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK
Sbjct: 5   RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 64

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT VFK G+AKSIHHA
Sbjct: 65  DPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 124

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRK 543
           RVLI QRHIRVG+QIVNVPSF+VR++++KHIDF+L+SP+GGG  GR KRK
Sbjct: 125 RVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRK 174

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>RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28)|
          Length = 194

 Score =  236 bits (603), Expect = 2e-62
 Identities = 114/171 (66%), Positives = 141/171 (82%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R Y KT+  P+RPYE  RLDAELKL GE+GL+ KRE++R+ + LS+IR AAR LLT DEK
Sbjct: 5   RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEK 64

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT V+K G+AKS+HHA
Sbjct: 65  DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 124

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           RVLI QRHI VG+QIVN+PSFMVR++SEKHIDF+ TSPFGG   GRV R+N
Sbjct: 125 RVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 175

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>RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28)|
          Length = 196

 Score =  235 bits (600), Expect = 5e-62
 Identities = 113/171 (66%), Positives = 141/171 (82%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R Y KT+  P+RPYE  RLDAELKL GE+GL+ K+E++R+ + LS+IR AAR LLT DEK
Sbjct: 5   RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEK 64

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT V+K G+AKS+HHA
Sbjct: 65  DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 124

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           RVLI QRHI VG+QIVN+PSFMVR++SEKHIDF+ TSPFGG   GRV R+N
Sbjct: 125 RVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 175

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>RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal protein 1024)|
           (Vegetative-specific protein V12)
          Length = 185

 Score =  234 bits (598), Expect = 9e-62
 Identities = 112/169 (66%), Positives = 142/169 (84%)
 Frame = +1

Query: 37  NYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKN 216
           NY KT   PRRP+EKER+DAELK+VGE+GL+ K E+WRVQYAL++IR AAR LL LDEK+
Sbjct: 4   NYSKTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKD 63

Query: 217 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHAR 396
           P+RIFEG+ALLRR+++ G++ E ++KLDY+L L  ++F+ RRLQTLVFK G+AKSIHHAR
Sbjct: 64  PKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHAR 123

Query: 397 VLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRK 543
           VLI+ RHIRVG+Q+VNVPSF+VRVES+KH+  + TSP  GG  GR  RK
Sbjct: 124 VLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRRARK 172

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>RS9_CAEEL (Q20228) 40S ribosomal protein S9|
          Length = 189

 Score =  229 bits (585), Expect = 3e-60
 Identities = 110/166 (66%), Positives = 140/166 (84%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K  K PRRP+EKERLD ELKL+G +GL+ KRE+WRV+Y L+++R AAR LLTL++K+P+R
Sbjct: 10  KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKR 69

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
           +FEG ALLRR+ + G+L E + KLDYVL L  E+FL RRLQT VFK G+AKSIHHAR+LI
Sbjct: 70  LFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILI 129

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRK 543
           +Q HIRV RQ+V+VPSF+VR++S+KHIDFSL SP+GGG  GRVKR+
Sbjct: 130 KQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRR 175

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>RS9_TRYBB (P17959) Probable 40S ribosomal protein S9|
          Length = 190

 Score =  224 bits (572), Expect = 9e-59
 Identities = 107/170 (62%), Positives = 134/170 (78%)
 Frame = +1

Query: 31  YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDE 210
           Y N+ + +K PRRP+EKERLD E+KL G+YGLRCKRE+WRV   LS++R  AR LLTL E
Sbjct: 4   YNNFNRVWKAPRRPFEKERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPE 63

Query: 211 KNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHH 390
            +PRR+ EG+A++RR + YG L E +DKLDYVL+LT  + L RRLQT+VFK G+AKS+HH
Sbjct: 64  NHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHH 123

Query: 391 ARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKR 540
           +RVLI+QRHI V +QIV +PSF+VRV SE HI F+  SPFG G  GRVKR
Sbjct: 124 SRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRVKR 173

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>RS9_NAEFO (Q25555) 40S ribosomal protein S9|
          Length = 186

 Score =  206 bits (525), Expect = 3e-53
 Identities = 107/178 (60%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
 Frame = +1

Query: 13  MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARH 192
           MV    YR + K    PRRP+EKER+D ELK+ G+YGL+ K+E+WR+QY L+R R  ARH
Sbjct: 1   MVQNRCYRVHSKVSLPPRRPFEKERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARH 60

Query: 193 LLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGM 372
           LLTL E + +R FEGAALLRRM R GLL E + +LDY+L+L  E+ L RRLQT+V K G+
Sbjct: 61  LLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGL 120

Query: 373 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFS-LTSPFGGGPAGRVKRK 543
           +KSIHHAR LI QRHIRVG+Q VNVPSF+VRV+SEKHI+ S  ++   GG  GR+ RK
Sbjct: 121 SKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGRMTRK 178

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>RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)|
          Length = 130

 Score =  172 bits (436), Expect = 6e-43
 Identities = 85/122 (69%), Positives = 101/122 (82%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 9   KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 68

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+A SIHH RVLI
Sbjct: 69  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLI 128

Query: 406 RQ 411
           RQ
Sbjct: 129 RQ 130

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>RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)|
          Length = 144

 Score =  165 bits (418), Expect = 7e-41
 Identities = 80/143 (55%), Positives = 108/143 (75%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           RN+  T+K P+ PYE+ER DAELKLVG++GL+ K+E+ RV Y L  +R  A+ +L  D K
Sbjct: 2   RNHSITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAK 61

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +P+R+ EGAALLRR++  G+L   Q+KL++VLAL  EN L RRLQTLV++ G  KSIHHA
Sbjct: 62  DPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFGKSIHHA 121

Query: 394 RVLIRQRHIRVGRQIVNVPSFMV 462
           RVLIR + I+ G+Q+  VPSF+V
Sbjct: 122 RVLIRGKMIKAGKQVGGVPSFLV 144

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>RS4_METJA (P54020) 30S ribosomal protein S4P|
          Length = 187

 Score =  122 bits (305), Expect = 9e-28
 Identities = 65/159 (40%), Positives = 96/159 (60%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R + KT++ P  P+ KER++ E +L  +YGLR KRE+W+ +  L + R  AR L++  ++
Sbjct: 6   RRFKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DR 63

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
             +   E   L   + +YG+L      LD VL+LT E+ L RRLQTLVF+ G+A++   A
Sbjct: 64  TEQGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQA 123

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
           R LI   HI V  ++V  PS+MV VE E  I ++  SPF
Sbjct: 124 RQLIVHGHIAVNGRVVTAPSYMVTVEEEDKISYAKNSPF 162

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>RS4_METKA (Q8TVC0) 30S ribosomal protein S4P|
          Length = 186

 Score =  121 bits (304), Expect = 1e-27
 Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ PR P+E ERL+ E KL+ +YGLR K+ELWR Q  L R R  A+ L+   +   +R
Sbjct: 9   KKYETPRHPWEAERLEYERKLMRKYGLRRKKELWRHQTQLKRWRERAKELMARTDPEAQR 68

Query: 226 IFEGAALLRRMNRYGLLAEGQDK--LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARV 399
             E  AL R++   G+L +  ++  LD +L LT E+ L RRLQT+V++ G+AK+   AR 
Sbjct: 69  --EREALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQ 126

Query: 400 LIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
           L+  RHI +G +IV VPS++V  E E+ +D+S  SP
Sbjct: 127 LVVHRHIAIGDRIVTVPSYLVSREEEEEVDYSPYSP 162

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>RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P|
          Length = 199

 Score =  118 bits (295), Expect = 1e-26
 Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKN 216
           K +  PR P+EKER+D E K+V +YGL+ K+E+WR +  LS IR+ AR L   L  ++ N
Sbjct: 9   KKYSTPRHPWEKERIDEENKIVVKYGLKNKKEIWRSEALLSSIRSQARDLRARLRTNDVN 68

Query: 217 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHAR 396
            ++  E   +++R+NRY LL+E    LD VL+LT EN L RRLQT+VF+  +A S+  AR
Sbjct: 69  AQKQLE--RMIKRLNRYKLLSENAT-LDDVLSLTVENILDRRLQTIVFRKNLAISVRQAR 125

Query: 397 VLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
            LI   HI V  + V VP  +V  + E  I +   SP
Sbjct: 126 QLITHGHISVAGRRVTVPGMLVEAKDEDTIAYEENSP 162

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>RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P|
          Length = 183

 Score =  117 bits (292), Expect = 3e-26
 Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLT-LDEKNPR 222
           K +  PR P+EK+R+DAE +L+ +YGL+ KRELWR Q  L+  R  AR L   L   +P 
Sbjct: 9   KKYSTPRHPWEKDRIDAERQLLIKYGLKNKRELWRAQTILTNFRTQARTLQAKLRYNDPL 68

Query: 223 RIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVL 402
            I +   L+ +++R  LL E    LD VL+L  E+ L RRL+TLV+K  +A ++  AR  
Sbjct: 69  AIKQFQLLIGKLSRLNLLGENAT-LDDVLSLNIEDILERRLETLVYKKNLALTMKQARQF 127

Query: 403 IRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
           I   HI+V  ++V +PSFMV    E  I ++ TSPF
Sbjct: 128 ITHGHIKVNDRVVTIPSFMVEKSMEDSITYNETSPF 163

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>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score =  114 bits (285), Expect = 2e-25
 Identities = 68/155 (43%), Positives = 91/155 (58%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI
Sbjct: 68  -IEREQLLSRLKRLGLLPEDA-VLDDVLSLTVEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
              HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 126 VHGHIEVNGQIIRSPSYLVLKEEEDKITYARTSPF 160

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>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score =  113 bits (283), Expect = 3e-25
 Identities = 68/155 (43%), Positives = 91/155 (58%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI
Sbjct: 68  -IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
              HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 126 VHGHIEVNGQIIRSPSYLVLKEEEDTITYARTSPF 160

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>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score =  113 bits (283), Expect = 3e-25
 Identities = 68/155 (43%), Positives = 91/155 (58%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI
Sbjct: 68  -IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
              HI V  QI+  PS++V  E E  I ++ TSPF
Sbjct: 126 VHGHIEVNGQIIRSPSYLVLKEEEDTITYARTSPF 160

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>RS4_AERPE (Q9YB58) 30S ribosomal protein S4P|
          Length = 171

 Score =  113 bits (282), Expect = 4e-25
 Identities = 63/155 (40%), Positives = 92/155 (59%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P+ P+ KERL+ E +L+G YGLR K+ELW+ +    R R+ AR LL L  +  R 
Sbjct: 9   KKWEGPKHPWIKERLERERELMGRYGLRNKKELWKAETLARRFRHRARSLLGLPPEVRRE 68

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
                 L+  + R GL+      +D VL + AE  L RRLQT+V+K G+AK+I+ AR L+
Sbjct: 69  A--SRVLVESLYRMGLIDNPNVDIDEVLGINAEKVLERRLQTIVYKKGLAKTIYQARQLV 126

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
              HI +  + V  P ++V  E EK ID++  SPF
Sbjct: 127 VHGHIAIAGRRVTSPGYLVSREEEKLIDYAPGSPF 161

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>RS4_THEVO (Q97B95) 30S ribosomal protein S4P|
          Length = 200

 Score =  113 bits (282), Expect = 4e-25
 Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 13/179 (7%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKN 216
           K +  PR P+EK+R+D E K++ +YGL+ KRE+WR +  LS IR+ AR+L   L   + N
Sbjct: 9   KKYSTPRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLRASDAN 68

Query: 217 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHAR 396
            ++  E   +++R++RY +L++ +  LD VL+LT EN L RRLQT+VFK  +A S   AR
Sbjct: 69  AQKQLE--RMIKRLSRYKILSD-KATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQAR 125

Query: 397 VLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGG----------GPAGRVKRK 543
            LI   HI V  + V VP  +V  + E  I +   SP              PA RVK +
Sbjct: 126 QLITHGHITVNGRRVTVPGMLVEAQYEDTIAYYENSPIANELHPIRQALLSPAERVKEE 184

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>RS4_SULTO (Q96YV8) 30S ribosomal protein S4P|
          Length = 177

 Score =  109 bits (273), Expect = 4e-24
 Identities = 63/167 (37%), Positives = 95/167 (56%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           + ++ P  P+ +  L+ E  L+G+YGLR KRELW  Q  + + R+ AR LL L      R
Sbjct: 9   RKWEGPGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPPAE--R 66

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
                 L++++ R G++ +    LD +L L  EN+L RRLQT+V+K G+A++I+ AR LI
Sbjct: 67  STREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQARQLI 126

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
              HI +G + V  P ++V    E  IDF  TSPF   P  +   +N
Sbjct: 127 VHGHIAIGGRRVTSPGYIVMRGEEDLIDFYPTSPFKQHPPTQQGEEN 173

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>RS4_SULAC (P39467) 30S ribosomal protein S4P|
          Length = 176

 Score =  109 bits (273), Expect = 4e-24
 Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLD-- 207
           R   K +  P  P+ K  L  E  L+G+YGLR K+E+W  Q  +   R+ AR LL L   
Sbjct: 5   RKSKKKWMGPSHPWIKINLGKEQILIGKYGLRNKKEIWIAQTMIRNFRHQARSLLALPPA 64

Query: 208 EKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIH 387
           E+N R       L++++ R G+L +    LD +L+LT EN+L RRLQT+V+K G+A++I+
Sbjct: 65  ERNIRE----KQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIY 120

Query: 388 HARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGP 522
            AR LI   HI +  + V  P ++V    E  ID+  TSPF   P
Sbjct: 121 QARQLITHGHIAISGRKVTSPGYVVLRGEEDLIDYYPTSPFKQNP 165

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>RS4_SULSO (P95987) 30S ribosomal protein S4P|
          Length = 181

 Score =  109 bits (272), Expect = 6e-24
 Identities = 61/159 (38%), Positives = 94/159 (59%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P+ KER+  E +L+G+YGLR KRE+W  Q  + + R+ AR LL L      R
Sbjct: 9   KKWETPGHPWIKERIGYEQELLGKYGLRNKREIWIAQSIIRKFRHQARSLLALPPAE--R 66

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
                 L+ ++ + GLL +    +D +L+LT ++ L RRLQT+V+K G++ +I+ AR LI
Sbjct: 67  AVREKQLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQTIVYKKGLSNTIYQARQLI 126

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGP 522
              HI V  + V  P ++V V+ E  ID+ +TS F   P
Sbjct: 127 THGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRP 165

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>RS4_ARCFU (O28000) 30S ribosomal protein S4P|
          Length = 172

 Score =  108 bits (269), Expect = 1e-23
 Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTL--- 204
           + + K +  P  P++K RL+ E++LV +YGLR KRELWR Q  L + R  AR LL     
Sbjct: 5   KRHRKKYTTPTHPWDKARLEKEMQLVIKYGLRNKRELWRFQNILRKYRRVARDLLAEIGL 64

Query: 205 -DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKS 381
             ++      +   +++++N+ G+L E    LD +L L+ E+FL RRLQT+V++ G+A++
Sbjct: 65  PGKEGEIAKAKAQTVIKKLNKMGILPENAT-LDDILNLSVEDFLERRLQTMVYRQGLART 123

Query: 382 IHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
           I  AR  I   HI V  + V  PSF+V  E E  I F   SP
Sbjct: 124 IKQARQFITHGHIAVDGRRVTSPSFIVTKELESKISFYRNSP 165

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>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score =  107 bits (268), Expect = 2e-23
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K+F+ PR P+++ R+ +E++LV  YGLR KRE+W+    L   R+ AR LL     +  R
Sbjct: 9   KSFETPRHPWQEARMASEVQLVKAYGLRNKREVWKAASTLRMYRSEARRLLASAANSQER 68

Query: 226 IFEG------AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIH 387
             EG        +L ++ RYG++    D +D +L+L  EN L RRLQT V + G+A+++ 
Sbjct: 69  GLEGHQKTQSEEILAKLIRYGIIKSDAD-IDDILSLKTENILERRLQTQVLRLGLARTVV 127

Query: 388 HARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
            AR  I   HI +  +   VP  +V  E E HI +  TSP
Sbjct: 128 QARQFITHGHIAINGRKATVPGMLVSKEDEMHIGYYATSP 167

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>RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)|
          Length = 77

 Score =  107 bits (266), Expect = 3e-23
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 373 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAGRVKRKN 546
           AKS+HHARVLIRQRHIRVGRQ+VNVPSFMVR++S+KHIDFSL SPFGGG  GRVKRKN
Sbjct: 1   AKSVHHARVLIRQRHIRVGRQVVNVPSFMVRLDSQKHIDFSLISPFGGGRPGRVKRKN 58

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>RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P|
          Length = 180

 Score =  105 bits (262), Expect = 8e-23
 Identities = 64/155 (41%), Positives = 87/155 (56%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P+ KERLD E  L   Y L+ K+ELWR +  L   R  AR LL    K    
Sbjct: 9   KKYETPSHPWIKERLDRERVLKRNYALKNKKELWRHETQLKEFRRRARRLLAARGKQAE- 67

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E   LL+R+ R GLL      LD VL+LT E+ L RRLQT+V++ G+A+++  AR LI
Sbjct: 68  -IERQQLLQRLYRLGLLP-ADAVLDDVLSLTVEDVLERRLQTIVYRKGLARTMKQARQLI 125

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPF 510
              HI V  Q++  P ++V  E E  I ++  SPF
Sbjct: 126 VHGHIEVNGQVIRSPGYLVLREEEDTITYAKGSPF 160

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>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 58/158 (36%), Positives = 92/158 (58%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R   K +  P  P+  ER+  E +LV +YGL+ K+E+W+ +  + R R  AR+LL +  +
Sbjct: 5   RKARKKYDTPPHPWNAERIKEENRLVAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASE 64

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
           +  +  E   LL  + R G+L EG  KL+ VL LT E+ L RRLQTLV K G+A+++  A
Sbjct: 65  HTGK--EREQLLGHLVRTGILNEGA-KLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEA 121

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
           R ++   HI +  + ++ P ++V+   E  I F  +SP
Sbjct: 122 RQMVIHGHIALDGRKIDAPGYIVKRGEEDKIGFYPSSP 159

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>RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P|
          Length = 180

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 2/168 (1%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           + ++ P  P++K+RL  E +L+ EYGL+ KRELW  +    + R  AR+L          
Sbjct: 6   RKWEGPSHPWQKQRLIIEKRLMKEYGLKNKRELWIAETIARKWRAYARYLNAKQAAGQDI 65

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E    L ++ + G+L+E  + LD VL LT ++ L RRLQT++ + G+AK++  AR  I
Sbjct: 66  SEEKERFLTKLKKLGVLSENAE-LDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFI 124

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGG--GPAGRVKRK 543
              HI V  ++V+ PS++V+ E E  I+F   SP      PA ++++K
Sbjct: 125 VHGHIMVNGEVVDAPSYLVKKEEEDKIEFVPFSPLANPEHPARKLEQK 172

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>RS4_METMP (Q6LXN0) 30S ribosomal protein S4P|
          Length = 178

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 55/158 (34%), Positives = 86/158 (54%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R  GK +  P  P+  ER+  E ++  +YGL  K+ELW+++  L   R  AR L++  + 
Sbjct: 5   RRLGKKYDTPNHPWIGERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DT 62

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
             +   E   L   + RY +L E +  LD+VL+L  E+ L RRLQT+VF+ G+AK+   A
Sbjct: 63  TTQGGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQA 122

Query: 394 RVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
           R  I   HI V  + V  P++++ V     I++   SP
Sbjct: 123 RQFIVHGHIAVNGKRVTAPAYLISVAENDAIEYVSNSP 160

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>RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P|
          Length = 159

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
 Frame = +1

Query: 58  KPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLL--TLDEKNPRRIF 231
           KP++ + K+ L  EL+L+GEYGLR K+ELW  +  L  I   AR LL  T +E+ P  + 
Sbjct: 15  KPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM- 73

Query: 232 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 411
                  ++ + G + +   +LD +L+L     L RRLQT+V++ G+AKSIHHAR LI  
Sbjct: 74  ---PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVH 130

Query: 412 RHIRVGRQIVNVPSFMVRVESEKHI 486
            H+ V  + V  P F+V  E E  I
Sbjct: 131 GHVAVAGRRVTSPGFLVPRELEDKI 155

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>RS4_METMA (Q8PV18) 30S ribosomal protein S4P|
          Length = 219

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTL------- 204
           K+++ PR P+++ R+ AE++LV  YGLR K+E+W+    L   R+ AR LL         
Sbjct: 9   KSYETPRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVASGGQE 68

Query: 205 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSI 384
            E       +   +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++
Sbjct: 69  GELEGHYATQSEEILSKLIRYGII-KADANVDDILSLKTENILERRLQTQVLRLGLARTV 127

Query: 385 HHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
             AR  I   HI +  +   +P  +V  E E HI +  +SP
Sbjct: 128 IQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGSSP 168

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>RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P|
          Length = 170

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 56/153 (36%), Positives = 81/153 (52%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  PY+ ER+  E  L+  YGL+ K ELWR Q  L   R  AR LL         
Sbjct: 9   KFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTG 63

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
              G   + R+ R G+L+E +++LD VL+L   + L RRLQT+V++ G+A ++  AR  +
Sbjct: 64  TVSGEEFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFV 122

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTS 504
              H+ V    V  PS+ V V  E  + F  TS
Sbjct: 123 SHGHVTVDGSRVTEPSYTVPVSEENTLAFDETS 155

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>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K+++ P+ P+++ R+  E++LV  YGLR K+E+W+    L   R+ AR LL         
Sbjct: 9   KSYETPKHPWQEARMATEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAHVASGQEG 68

Query: 226 IFEG------AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIH 387
             EG        +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++ 
Sbjct: 69  GLEGHYRTQSEEILSKLIRYGII-KSDANIDDILSLKTENILERRLQTQVLRLGLARTVI 127

Query: 388 HARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
            AR  I   HI +  +   +P  +V  E E HI +   SP
Sbjct: 128 QARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGNSP 167

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>RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P|
          Length = 174

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P++ ER+  E  L+  YGL  K ELWR Q  L   R  AR L+   + +   
Sbjct: 8   KFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVA 67

Query: 226 IFE-GAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVL 402
             E G+  L R+ R G+L + +D LD +L+L   + L RRLQT+ ++ G+  +   AR  
Sbjct: 68  AAEAGSEFLARLKRIGVL-DDEDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQF 126

Query: 403 IRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSP 507
           I   H+ V    V+ PS+ V V  E  I+F  TSP
Sbjct: 127 IAHGHVTVNGARVSAPSYKVDVAEEGEIEFDETSP 161

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>RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)|
          Length = 171

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 57/149 (38%), Positives = 77/149 (51%)
 Frame = +1

Query: 46  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 225
           K ++ P  P++ ER+  E  L+G YGL+ K ELWR Q  L   R  AR LL    ++   
Sbjct: 8   KFYETPNHPFQGERIADEANLIGRYGLKNKEELWRAQSELRGYRREARKLLGSAGEHET- 66

Query: 226 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLI 405
             E    L R+ RYG+L E QD+LD VL+L   + L RRLQT+V++ G A +   AR  I
Sbjct: 67  --ESEEFLARLKRYGILNE-QDQLDDVLSLDVTDVLERRLQTVVYRKGYANTPEQARQFI 123

Query: 406 RQRHIRVGRQIVNVPSFMVRVESEKHIDF 492
              HI +    V  P   V    E  + F
Sbjct: 124 VHGHIVLDDARVTRPGMTVETAVESSVGF 152

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>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 42/130 (32%), Positives = 69/130 (53%)
 Frame = +1

Query: 97  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 276
           EL+++  Y L+ + E  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLV 89

Query: 277 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
              +  L+   +++A +F  RRL TL+ K  MA+ +  A   + Q H+RVG  +V  P+F
Sbjct: 90  PT-RGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 457 MVRVESEKHI 486
           +V    E  +
Sbjct: 149 LVTRSMEDFV 158

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>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = +1

Query: 97  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 276
           EL+++  Y L+ + +  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLV 89

Query: 277 AE--GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVP 450
                Q+  D+V   TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P
Sbjct: 90  PTRGSQELCDFV---TASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDP 146

Query: 451 SFMVRVESEKHI 486
           +F+V    E  +
Sbjct: 147 AFLVTRSMEDFV 158

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>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 40/130 (30%), Positives = 67/130 (51%)
 Frame = +1

Query: 97  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 276
           EL+++  Y L+ + +  R       +R  AR L  L E++  R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 277 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
              +  L+    +TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P+F
Sbjct: 90  PT-RGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 457 MVRVESEKHI 486
           +V    E  +
Sbjct: 149 LVTRSMEDFV 158

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>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
 Frame = +1

Query: 133 KRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVL 309
           KRE + +   L+ + R  A  +  L E +P R      +L +    GL+    D L+ + 
Sbjct: 40  KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTS-DTLERIG 98

Query: 310 ALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHID 489
            +T  +F  RRL  ++   GM +S+  A  L+ Q H+R+G ++V  P+FMV   SE  I 
Sbjct: 99  KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMIT 158

Query: 490 FSLTS 504
           ++  S
Sbjct: 159 WTKAS 163

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>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 32/136 (23%), Positives = 59/136 (43%)
 Frame = +1

Query: 97  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 276
           ++ ++  Y +  + E  +      + R  A  L  LD  +P R+     LL ++   G+L
Sbjct: 29  DVMVMRRYHISKREEYQKYNIICGKFRQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGIL 88

Query: 277 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
                  D            RRL  ++ K  M++ +  A  LI Q H+RVG  ++  P++
Sbjct: 89  PSKSKMSDIENKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQGHVRVGPHVITDPAY 148

Query: 457 MVRVESEKHIDFSLTS 504
           +V    E  + ++ TS
Sbjct: 149 LVTRSLEDFVTWTDTS 164

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>RS4_PELCD (Q3A6M1) 30S ribosomal protein S4|
          Length = 209

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = +1

Query: 250 RRMNR-YGLLAEGQ----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 405
           +RM R YGLL +      DK D +  +T EN L    RRL + V++ G A S    R L+
Sbjct: 61  QRMKRTYGLLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALV 120

Query: 406 RQRHIRVGRQIVNVPSFMVR 465
           RQ H  V  + VN+PS+++R
Sbjct: 121 RQGHFLVNGRKVNIPSYVMR 140

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>RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A|
          Length = 207

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
 Frame = +1

Query: 85  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 249
           R   +L L GE  Y  +C   KR     Q+  SR R    + + L EK   R + G  L 
Sbjct: 14  REGVKLYLKGEKCYSDKCPIVKRATPPGQHGASR-RKPTEYAIQLREKQKARRYYGV-LE 71

Query: 250 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 429
           R+  RY  +A  +  +   + L     L RRL  +V++ G A S   AR +++  HI V 
Sbjct: 72  RQFERYFEMASRKKGVTGEVLLQT---LERRLDNVVYRMGFAASRAEARQIVKHSHIEVN 128

Query: 430 RQIVNVPSFMVR 465
            + VN+PS++VR
Sbjct: 129 GRKVNIPSYLVR 140

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>RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 471
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+  + E
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 134

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>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 31/138 (22%), Positives = 63/138 (45%)
 Frame = +1

Query: 73  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLR 252
           +++++   + +++  Y ++ + +  +       IR  A  L  L   +P R      LL 
Sbjct: 21  WKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLD 80

Query: 253 RMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGR 432
           ++   G+L       D    +T      RRL  ++ +  MA++I  A   I Q H+RVG 
Sbjct: 81  KLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKMAETIQDAVKFIEQGHVRVGP 140

Query: 433 QIVNVPSFMVRVESEKHI 486
            ++N P+++V    E ++
Sbjct: 141 NLINDPAYLVTRNMEDYV 158

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>RS4_FUSNN (Q8RE43) 30S ribosomal protein S4|
          Length = 195

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 32/100 (32%), Positives = 51/100 (51%)
 Frame = +1

Query: 169 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 348
           R +  A+ +  + EK  R+I+E AA  R++               V  LT   +L RRL+
Sbjct: 48  REKQKAKFIYNVMEKQFRKIYEEAA--RKLG--------------VTGLTLIEYLERRLE 91

Query: 349 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 468
            +V++ G AK+   AR ++   HI V  + VN+ SF V+V
Sbjct: 92  NVVYRLGFAKTRRQARQIVSHGHIAVNGRRVNIASFRVKV 131

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>RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +1

Query: 325 NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 486
           N L  RL  +V +AG+A +I  +R L+  +HI V  +IVN+PSF   +    H+
Sbjct: 86  NLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVNNKIVNIPSFQCSIGDTIHV 139

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>RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           S  +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL
Sbjct: 36  STAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQILL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 483
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 484 IDFSLTS 504
           IDFS  S
Sbjct: 152 IDFSQKS 158

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>RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           S  +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL
Sbjct: 36  SAAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 483
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 484 IDFS 495
           IDFS
Sbjct: 152 IDFS 155

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>RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V R+IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNRRIVDIPSF 128

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>RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4|
          Length = 208

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLA---RRL 345
           +    + L L EK   +   G  L  +  RY  +AE Q        +T EN L    RRL
Sbjct: 48  KKPTEYALQLREKQKAKRIYGV-LEAQFRRYFEMAERQP------GITGENLLVILERRL 100

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 468
             +V++ G+A+S   AR L+R     V  + VN+PS++V+V
Sbjct: 101 DNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKV 141

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>RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 129

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>RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G A  + +    +    +     VL       L  RL  +
Sbjct: 40  KKVSQYCIRLEEKQKLRFHHGLAEQQLLKYVRIARRAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  +HI V  + +NVPS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHKHILVNNRAINVPSY 129

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>RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPSY 129

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>RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    R++ +Y  +A G       ++L +      RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITE-RQLLKYVRIARGAKGSTGQISLQSSEM---RLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ G+A +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 129

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>RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 41/141 (29%), Positives = 59/141 (41%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R  G  FKK RR      L ++   VG       R   + QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGALPGLTSKRPTVGSELRNQSRSTKKSQY---RIR--------LEEK 51

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
              R   G    + +    +  + +     VL       L  RL  ++F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPQA 107

Query: 394 RVLIRQRHIRVGRQIVNVPSF 456
           R L+  RH+ V   IV++PS+
Sbjct: 108 RQLVNHRHVFVNGHIVDIPSY 128

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>RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNIIFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +1

Query: 178 NAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLV 357
           N +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++
Sbjct: 40  NKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGPTGQVLL----QLLEMRLDNIL 95

Query: 358 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 96  FRLGMASTIPQARQLVNHRHILVNGRIVDIPSY 128

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>RS4_DESPS (Q6AP44) 30S ribosomal protein S4|
          Length = 210

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRC---KRELWRVQYALSRIRNAARHLLTL 204
           RN G   ++ RR    E L   LK    Y  +C   +R     Q+  +R +  + + + L
Sbjct: 3   RNIGAVCRRCRR----ENLKLFLKGDRCYSDKCSFERRAFAPGQHGQARFKKVSDYAVQL 58

Query: 205 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLA-----LTAENFLA---RRLQTLVF 360
            EK   +           + YG+L E Q +L +  A     +  EN L    RRL   VF
Sbjct: 59  REKQKVK-----------SMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVF 106

Query: 361 KAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
           +AG A S   AR ++R +HI +  + V++PS+ V
Sbjct: 107 RAGFASSRTQARQIVRHKHILINGKRVDIPSYQV 140

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>RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G   L+ +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +    +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARHAKGSTGEILL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNEHIVDIPSY 129

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>RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSSKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR LI  RH+ V   IV++PS+
Sbjct: 92  DNILFRLGMAATIPQARQLINHRHVLVNGHIVDIPSY 128

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>RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY 128

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>RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVQIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B|
          Length = 205

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = +1

Query: 316 TAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 477
           T    L RRL  +VF+AG A ++  AR L+  RH+R+  + VN+PS  + V  E
Sbjct: 87  TLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDE 140

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>RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4|
          Length = 200

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = +1

Query: 43  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           GK  +K  RPY   +    + K + EYGL+ +             +   RH+  ++E+  
Sbjct: 23  GKELQK--RPYAPGQHGPNQRKKLSEYGLQLQE------------KQKLRHMYGVNERQF 68

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHH 390
           RRIF  A  +  ++                    ENF   L  RL  LV++ G+A++   
Sbjct: 69  RRIFNDAGKMAGIH-------------------GENFMILLESRLDNLVYRMGLARTRRA 109

Query: 391 ARVLIRQRHIRVGRQIVNVPSFMVR 465
           AR L+   HI V  Q V++PS+ V+
Sbjct: 110 ARQLVNHGHITVDGQRVDIPSYRVK 134

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>RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+
Sbjct: 96  LFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 129

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>RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RS4_BACTN (Q8A4A1) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +1

Query: 112 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 291
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGVQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 292 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
                        L  RL  +VF+ G+A +   AR L+  +HI V  ++VN+PSF V+
Sbjct: 88  -----------QLLEGRLDNVVFRLGIAPTRAAARQLVSHKHITVDGEVVNIPSFAVK 134

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>RS4_BACFR (Q64NN4) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +1

Query: 112 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 291
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 292 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
                        L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

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>RS4_BACFN (Q5L8D5) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +1

Query: 112 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 291
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 292 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
                        L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

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>RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

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>RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

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>RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

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>RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

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>RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

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>RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

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>RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4|
          Length = 257

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = +1

Query: 328 FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           FL  RL  +VF+  MA +I  AR LI   HIRV  + VN+PS+M +
Sbjct: 107 FLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKVNIPSYMCK 152

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>RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

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>RT04_RECAM (O21263) Mitochondrial ribosomal protein S4|
          Length = 249

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           L RRL  ++++AG   SI+ AR+L+  +H+ V  +I N+ S++V+
Sbjct: 131 LERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQ 175

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>RS4_STRCO (Q9KXP5) 30S ribosomal protein S4|
          Length = 204

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE--------SEKHI 486
           L RRL  LV ++G+A++I+ AR ++   HI+V  Q V+ PSF VR +        S++  
Sbjct: 90  LERRLDALVLRSGIARTIYQARQMVVHGHIQVNGQKVDKPSFRVRPDDVVQVRERSKEKT 149

Query: 487 DFSLTSPFGGGPAGRVKR 540
            F++    G  P G   R
Sbjct: 150 LFTIAREGGFAPDGETPR 167

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>RS4_STRAW (Q827S7) 30S ribosomal protein S4|
          Length = 204

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
 Frame = +1

Query: 265 YGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVN 444
           Y   A+ Q K    L +  E    RRL  LV ++G+A++I+ AR ++   HI V  Q V+
Sbjct: 72  YERAAKTQGKTGEALVIELE----RRLDALVLRSGIARTIYQARQMVVHGHIEVNGQKVD 127

Query: 445 VPSF--------MVRVESEKHIDFSLTSPFGGGPAGRVKR 540
            PSF        MVR  S +   F +    G  P G   R
Sbjct: 128 KPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAPDGETPR 167

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>RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 42/141 (29%), Positives = 60/141 (42%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R  G  FKK RR      L ++    G       R + R QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGTLPGLTSKRPRSGSDLKNPLRSVKRSQY---RIR--------LEEK 51

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
              R   G    + +    +  + +     VL       L  RL  ++F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPGA 107

Query: 394 RVLIRQRHIRVGRQIVNVPSF 456
           R L+  RHI V  +IV++PS+
Sbjct: 108 RQLVNHRHILVNGRIVDIPSY 128

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>RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 42/141 (29%), Positives = 60/141 (42%)
 Frame = +1

Query: 34  RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 213
           R  G  FKK RR      L ++    G       R + R QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGTLPGLTSKRPRSGSDLKNPLRSVKRSQY---RIR--------LEEK 51

Query: 214 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHA 393
              R   G    + +    +  + +     VL       L  RL  ++F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPGA 107

Query: 394 RVLIRQRHIRVGRQIVNVPSF 456
           R L+  RHI V  +IV++PS+
Sbjct: 108 RQLVNHRHILVNGRIVDIPSY 128

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>RR4_OROMI (O78678) Plastid 30S ribosomal protein S4|
          Length = 203

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRFVKKSQYRIRLEEKQKLRFHYGLTERQLLKYIRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPAARQLVNHRHVLVNGRIVDIPSY 128

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>RS4_PORGI (Q7MTN9) 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 333
           Q+  +R R  + + L L EK   +   G  +L +  R+  L     +   V       FL
Sbjct: 35  QHGNNRRRKTSEYGLQLREKQKAKYTYG--VLEKQFRH--LFHRAQRAKGVTGELLIQFL 90

Query: 334 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
             RL  +VF+ G+A +   AR L+  RHI V   +VN+PS+ V+
Sbjct: 91  EARLDNVVFRLGIAPTRSAARQLVSHRHITVDGSVVNIPSYSVK 134

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>RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

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>RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

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>RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +1

Query: 169 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 348
           R    +++ + L+EK   R   G    + +    +  + +     VL       L  RL 
Sbjct: 37  RFGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLD 92

Query: 349 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 93  NILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

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>RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSY 128

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>RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRLVDIPSY 128

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>RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +    +     VL   +E     RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLLQLSE----MRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

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>RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   +V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYVVDIPSY 129

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>RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +    +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

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>RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGYIVDIPSY 129

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>RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLVRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPRARQLVNHRHILVNGRIVDIPSY 128

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>RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 28/90 (31%), Positives = 42/90 (46%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL   +F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNTLFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

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>RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4|
          Length = 212

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           S+ ++ + + + L+EK   R   G    + +    L    +     VL       L  RL
Sbjct: 36  SQRKDKSEYRIRLEEKQKLRFHYGITERQLLRYVRLARRAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+   H+ V  ++V++PSF
Sbjct: 92  DNIIFRLGMAPTIPAARQLVNHGHVLVNERVVDIPSF 128

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>RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHMAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RS4_THEFY (Q47R66) 30S ribosomal protein S4|
          Length = 203

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
 Frame = +1

Query: 112 GEYGLRCKRELWRVQYALSRI-RNAARHLLTLDEKNPRRIFEGAALLRRMNRYG--LLAE 282
           GE+G R +R      YA+ +  +   R    L EK   R++E A   +R  R G  ++AE
Sbjct: 34  GEHGRRVRRST--SDYAVRQAEKQKLRWYYDLSEKQLARVYENAK--KRPGRTGEEMIAE 89

Query: 283 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
                           L  RL T++ +AG A SI+ AR  I   HI V  + V++PS+ V
Sbjct: 90  ----------------LELRLATVLLRAGFAASIYAARQFINHGHITVDGKKVDIPSYQV 133

Query: 463 R 465
           +
Sbjct: 134 K 134

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>RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 429
           RR+ R  L   G      VL L     L  RL +LV++AG A +   AR L+   H+ V 
Sbjct: 71  RRLYRVALGRPG------VLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNHSHVLVN 124

Query: 430 RQIVNVPSFMVRVES 474
            + VN+PS +V V S
Sbjct: 125 NKKVNIPSALVEVGS 139

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>RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGHIVDIPSY 129

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>RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

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>RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

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>RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVQIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 197

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RS4_STAS1 (Q49YF2) 30S ribosomal protein S4|
          Length = 200

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
 Frame = +1

Query: 43  GKTFKKPRR-----PYEKERLDAELKLVGEYGLRCKRELWRVQYALS-RIRNAARHLLTL 204
           G  +KK RR         + L+      G++G   +++L   +YAL  R +   R+L  +
Sbjct: 6   GSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKL--SEYALQLREKQKLRYLYGM 63

Query: 205 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSI 384
            E+  R  FE A      N++G+  E   +L           LA RL  +V+  G+A++ 
Sbjct: 64  TERQFRNTFEIAG-----NQHGVHGENFMQL-----------LAARLDAVVYSLGLARTR 107

Query: 385 HHARVLIRQRHIRVGRQIVNVPSFMVRVESE 477
             AR ++   HI V  + V++PS+ ++   E
Sbjct: 108 RQARQIVNHGHIEVDGKRVDIPSYTLKPGQE 138

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>RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4|
          Length = 200

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
 Frame = +1

Query: 64  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 240
           RRPY   +    + K + EYGL+               +   RH+  L E+  +  F  A
Sbjct: 28  RRPYAPGQHGPTQRKKISEYGLQQAE------------KQKLRHMYGLTERQFKNTFNKA 75

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 411
             LR   ++G                 ENF   L +RL  +V++ G+A++   AR L+  
Sbjct: 76  GKLR--GKHG-----------------ENFMILLEQRLDNIVYRLGLARTRRAARQLVNH 116

Query: 412 RHIRVGRQIVNVPSFMVRV 468
            HI V  + V++PS+ V V
Sbjct: 117 GHITVDGKRVDIPSYQVSV 135

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>RS4_GEOKA (Q5KW49) 30S ribosomal protein S4|
          Length = 200

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = +1

Query: 43  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           GK  +K  RPY   +    + + + EYGL+ +             +   RH+  ++E+  
Sbjct: 23  GKELQK--RPYPPGQHGPGQRRKLSEYGLQLQE------------KQKLRHMYGVNERQF 68

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHH 390
           R+ FE A   +   ++G                 ENF   L  RL  LV++ G+A++   
Sbjct: 69  RKTFEEAG--KMPGKHG-----------------ENFMILLESRLDNLVYRLGLARTRRQ 109

Query: 391 ARVLIRQRHIRVGRQIVNVPSFMVR 465
           AR L+   HI V    VN+PS+ V+
Sbjct: 110 ARQLVTHGHILVDGSRVNIPSYRVK 134

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>RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

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>RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

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>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = +1

Query: 262 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 441
           R G + EGQ  +++++       L RRL ++V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGQHGINFMI------LLERRLDSIVYRLGLATTREQARQLVNHGHITVDGKRV 127

Query: 442 NVPSFMVRV 468
           ++PS+ V V
Sbjct: 128 DIPSYEVSV 136

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>RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

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>RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

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>RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

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>RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

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>RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic protein)|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 187 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 366
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

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>RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNDYIVDIPSY 129

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>RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRPGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  + V++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGRTVDIPSY 128

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>RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

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>RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

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>RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

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>RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  TFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

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>RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           +F+ GM  +I  AR L+  RHI V   IV++PS+  +
Sbjct: 96  IFRLGMFPTIPGARQLVNHRHILVNGPIVDIPSYQCK 132

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>RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4|
          Length = 228

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           S  R  +++ + L+EK   R   G    + +    +    +     VL       L  RL
Sbjct: 38  SSSRKISQYRIRLEEKQKLRFHYGLTERQLLKYVRVSRRAKGSTGQVLL----QLLEMRL 93

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+   HIRV   +V++PS+
Sbjct: 94  DNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 130

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>RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +1

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 357
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 358 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

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>RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +1

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 357
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNIL 98

Query: 358 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

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>RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +1

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 357
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 358 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

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>RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +1

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 357
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 358 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

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>RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)|
          Length = 199

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = +1

Query: 43  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           GK  +K  RPY   +    + + + EYGL+ +             +   RH+  ++E+  
Sbjct: 22  GKELQK--RPYPPGQHGPGQRRKLSEYGLQLQE------------KQKLRHMYGVNERQF 67

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHH 390
           R+ FE A   +   ++G                 ENF   L  RL  LV++ G+A++   
Sbjct: 68  RKTFEEAG--KMPGKHG-----------------ENFMILLESRLDNLVYRLGLARTRRQ 108

Query: 391 ARVLIRQRHIRVGRQIVNVPSFMVR 465
           AR L+   HI V    VN+PS+ V+
Sbjct: 109 ARQLVTHGHIIVDGSRVNIPSYRVK 133

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>RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4|
          Length = 208

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 36/133 (27%), Positives = 56/133 (42%)
 Frame = +1

Query: 64  RRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAA 243
           +RPY   +       + EYGL+ +             +  A+ +  + EK  R IF+ A 
Sbjct: 35  KRPYAPGQHGQRRSKISEYGLQLRE------------KQKAKFMYGISEKQFRSIFQEAN 82

Query: 244 LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIR 423
            L      G   E   KL           L RRL  +V++ G A +   AR ++   H+ 
Sbjct: 83  RLE-----GNTGELLIKL-----------LERRLDNVVYRMGFATTRRFARQMVSHGHVL 126

Query: 424 VGRQIVNVPSFMV 462
           V  + VN+PS+MV
Sbjct: 127 VDGKRVNIPSYMV 139

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>RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHIVDIPSY 121

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>RS4_STAAW (P66564) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAS (Q6G8K8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAR (Q6GFY8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAN (P66563) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAM (P66562) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAC (Q5HF54) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_STAAB (Q2YTH0) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

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>RS4_THET8 (P80373) 30S ribosomal protein S4|
          Length = 208

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
 Frame = +1

Query: 85  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 249
           R   +L L GE  Y  +C   +R     Q+   R R  + + + L EK   R   G +  
Sbjct: 13  REGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISER 72

Query: 250 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 429
           +  N    L E   K   V        L  RL  +V++ G A S   AR L+R  HI V 
Sbjct: 73  QFRN----LFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVN 128

Query: 430 RQIVNVPSFMVRVESE 477
            + V++PS+ VR   E
Sbjct: 129 GRRVDLPSYRVRPGDE 144

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>RS4_THET2 (P62664) 30S ribosomal protein S4|
          Length = 208

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
 Frame = +1

Query: 85  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 249
           R   +L L GE  Y  +C   +R     Q+   R R  + + + L EK   R   G +  
Sbjct: 13  REGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISER 72

Query: 250 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 429
           +  N    L E   K   V        L  RL  +V++ G A S   AR L+R  HI V 
Sbjct: 73  QFRN----LFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVN 128

Query: 430 RQIVNVPSFMVRVESE 477
            + V++PS+ VR   E
Sbjct: 129 GRRVDLPSYRVRPGDE 144

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>RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/94 (24%), Positives = 46/94 (48%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +    +  + +     +L+ T E     RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQILSQTLE----MRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM+ +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILINDNTVDIPSY 129

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>RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 184

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

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>RS4_PELLD (Q3B6D7) 30S ribosomal protein S4|
          Length = 203

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 330
           Q+   R    + + L L EK   +   G  L ++   Y   A  Q        +T +N  
Sbjct: 36  QHGQGRRGKISEYALQLREKQKMKYLYGI-LEKQFRNYYKKAVSQR------GVTGDNLV 88

Query: 331 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
             + RRL  +VF+AG A S   AR L+   H+ V  + VN+PSF+V
Sbjct: 89  KLIERRLDNVVFRAGFAPSRAGARQLVSHSHLLVNGRKVNIPSFLV 134

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>RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4|
          Length = 207

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +1

Query: 313 LTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           LT EN    L  RL  LV +AG A++I  AR  +  RHI V  ++V+ PSF V+
Sbjct: 82  LTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRHILVDGKLVDRPSFRVK 135

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>RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +1

Query: 79  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 255
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 256 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 426
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 427 GRQIVNVPSFMV 462
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

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>RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +1

Query: 79  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 255
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 256 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 426
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 427 GRQIVNVPSFMV 462
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

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>RS4_LEGPA (Q5X835) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +1

Query: 79  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 255
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 256 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 426
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 427 GRQIVNVPSFMV 462
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

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>RS4_SYNY3 (P48939) 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
 Frame = +1

Query: 169 RIRNAARHLLTLDEKNPRRIF---EGAALLRRMNRYGLLAEGQDKLDYVLALTAENF--- 330
           RI      L  L  K+PRR +   +     R+ + Y +  E + KL     +T +     
Sbjct: 10  RIVRRLGELPGLSRKSPRRAYPPGQHGQARRKRSEYAIRLEEKQKLRLNYGITEKQLVRY 69

Query: 331 ------------------LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
                             L  RL   VF+ GMA +I  AR L+   HI V  Q+V++PS+
Sbjct: 70  VKKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGHITVNGQVVDIPSY 129

Query: 457 MVR 465
             R
Sbjct: 130 QCR 132

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>RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNSTVDIPSY 129

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>RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G A  + +    +  + +     +L       L  RL   
Sbjct: 40  KKVSQYRIRLEEKQKLRSHYGLAERQLLKYMRIARKAKGSTGQILL----QLLEMRLDNT 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GM+ +I  AR L+  RHI +   +V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHISINNDVVDIPSY 129

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>RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNNTVDIPSY 129

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>RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    +    + +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFNYGLRERQLRKYFSIAIKTRGSTGKVLM----QLLEMRLDNIIFR 97

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHVLVNGRIVDIPSY 128

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>RS4_CORGL (Q8NSV4) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 330
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   AE   +       T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRY--YAEANRRA----GKTGENLV 86

Query: 331 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
             L  RL  +V++AG+A +   AR L+   H  V  + ++VPSF V
Sbjct: 87  VLLESRLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRV 132

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>RS4_COREF (Q8FS34) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 330
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   A  +         T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRYYAEANRRP------GKTGENLV 86

Query: 331 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
             L  RL  +V++AG+A++   AR L+   H  V  + V+VPSF V
Sbjct: 87  VMLESRLDNVVYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRV 132

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>RS4_CORAM (Q3S664) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 330
           Q   +RI+ +  +LL L EK   +   G  L R+  RY + A  Q         T +N  
Sbjct: 35  QAGRNRIKES-EYLLQLQEKQKAKYTYGV-LERQFRRYYVEANRQP------GKTGDNLV 86

Query: 331 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
             L  RL  +V++AG+A++   AR L+   H  V  +  NVPS+ V
Sbjct: 87  VLLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYRV 132

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>RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +1

Query: 184 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 363
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 364 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            GMA +I  AR L+  RHI V  +I+++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIMDIPSY 121

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>RS4_LACJO (Q74K05) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = +1

Query: 262 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 441
           R G + EG+  ++++        L RRL  +V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGKHGVNFMA------LLERRLDNIVYRLGLASTREQARQLVNHGHILVDGKRV 127

Query: 442 NVPSFMVRVESE 477
           ++PS+ V+V  E
Sbjct: 128 DIPSYEVKVGQE 139

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>RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = +1

Query: 64  RRPYEKERLDAELK-LVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 240
           RRPY+  +     +  V EYG++               +   RH+  ++E+  R +F  A
Sbjct: 28  RRPYKPGQHGPNSRGKVSEYGMQLTE------------KQKLRHMYGMNERQFRTLFIKA 75

Query: 241 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 420
           + ++         EG+  +++++       L +RL  +V++ G+A +   AR L+   HI
Sbjct: 76  SKIK---------EGKHGVNFMV------LLEQRLDNVVYRLGLATTRRQARQLVNHGHI 120

Query: 421 RVGRQIVNVPSFMVRV 468
            V  + V++PS+ V V
Sbjct: 121 TVDGKRVDIPSYHVEV 136

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>RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
 Frame = +1

Query: 43  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           GK  +K  RPY        + K + EYGL+ +             +   RH+  ++E+  
Sbjct: 22  GKELEK--RPYAPGPHGPGQRKKLSEYGLQLQE------------KQKLRHMYGVNERQF 67

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARV 399
           R +F+ A  L           G+   ++++ L +      RL  +V+K G+A++   AR 
Sbjct: 68  RTLFDKAGKLA----------GKHGENFMILLDS------RLDNVVYKLGLARTRRQARQ 111

Query: 400 LIRQRHIRVGRQIVNVPSFMVR 465
           L+   HI V    V++PS++V+
Sbjct: 112 LVNHGHILVDGSRVDIPSYLVK 133

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>RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
 Frame = +1

Query: 121 GLRCKRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 297
           GL  KR     Q  L  + +  +++ + L+EK   R   G    R++ RY  +A    K 
Sbjct: 20  GLTTKRRKLTEQNKLQDKKQKKSQYRIRLEEKQKLRFHYGLTE-RQLLRYIRIAR---KA 75

Query: 298 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
                 T    L  RL   +F+ GMA +I  AR L+   HI +  ++V++PS+
Sbjct: 76  KGSTGQTLLQLLEMRLDNTIFRLGMAATIRAARQLVNHGHIVLNERVVDIPSY 128

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>RS4_GEOSL (Q749B2) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +1

Query: 298 DYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  +R
Sbjct: 82  DRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARILVRHNHFTLNGKKANIPSIQLR 140

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>RS4_GEOMG (Q39XY0) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +1

Query: 289 DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 459
           ++ D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  
Sbjct: 79  EEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARILVRHNHFTLNGRKANIPSIQ 138

Query: 460 VR 465
           ++
Sbjct: 139 LK 140

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>RS4_BACLD (Q65G42) 30S ribosomal protein S4|
          Length = 200

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = +1

Query: 43  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 219
           GK  +K  RPY        + K + EYGL+ +             +   RH+  ++E+  
Sbjct: 23  GKELEK--RPYAPGPHGPGQRKKLSEYGLQLQE------------KQKLRHMYGVNERQF 68

Query: 220 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHH 390
           R +F+ AA  +   ++G                 ENF   L  RL  +V++ G+A++   
Sbjct: 69  RNLFDKAA--KMAGKHG-----------------ENFMILLESRLDNIVYRLGLARTRRQ 109

Query: 391 ARVLIRQRHIRVGRQIVNVPSFMVR 465
           AR L+   H+ V    V++PS+ V+
Sbjct: 110 ARQLVNHGHVLVDGSRVDIPSYQVK 134

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>RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4|
          Length = 197

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNR----YGLLAEGQDKLDYVLALTAEN-- 327
           S   N     L +D+   R+I +    L    R    YGL      +   +   T  +  
Sbjct: 16  SNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYGLTERQLLRYVRIARRTRGSTG 75

Query: 328 -----FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
                 L  RL  ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 76  QVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVDIPSY 123

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>RS4_LISMF (Q71Z71) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = +1

Query: 235 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 351
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 352 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 468
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

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>RS4_LISIN (Q92BB2) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = +1

Query: 235 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 351
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 352 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 468
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

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>RS4_NITWN (Q3ST14) 30S ribosomal protein S4|
          Length = 205

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = +1

Query: 265 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHI 420
           YG ++E Q    YV A      + EN    L RRL T+V++A    +I  AR  I   H+
Sbjct: 62  YGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGHV 121

Query: 421 RVGRQIVNVPSFMVRV 468
           +V  + VN+PS+ ++V
Sbjct: 122 KVNGRRVNIPSYKLKV 137

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>RS4_THETN (Q8R7Y1) 30S ribosomal protein S4|
          Length = 206

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQ-----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 405
           +++ RY  + E Q     ++ + +  +T EN L    RRL  +V++ G A S   AR L+
Sbjct: 61  QKLKRYYGILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQLV 120

Query: 406 RQRHIRVGRQIVNVPSFMVR 465
              HI V  + V++PS++V+
Sbjct: 121 SHGHIEVNGKKVDIPSYLVK 140

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>RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+  RHI V  +IV++ S+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASY 128

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>RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAA---LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           +  +++ + L+EK   R   G     LLR M R    A+G    + +        L  RL
Sbjct: 40  KKPSQYRIRLEEKQKLRYNYGVTEKQLLRYMQR-ARRAKGSSGENLL------QLLEMRL 92

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
            T +F+ GMA ++  AR LI   HI V  Q VN+PS+
Sbjct: 93  DTTIFRLGMAPTMLSARQLITHGHILVSEQRVNIPSY 129

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>RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

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>RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA ++  AR L+  RHI +   +V++PS+
Sbjct: 96  LFRLGMALTVPGARQLVNHRHILINNSMVDIPSY 129

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>RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSVKKSQYRIRLEEKQKLRFHYGLTEHQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+   HI V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPQARQLVNHGHILVNGRIVDIPSY 128

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>RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

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>RS4_IDILO (Q5QXV7) 30S ribosomal protein S4|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +1

Query: 316 TAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 471
           T EN L    +RL  +V++ G A +   AR L+  + + V  Q+VN+PSF VR E
Sbjct: 86  TGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKVRPE 140

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>RS4_CORJK (Q4JTC1) 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +1

Query: 154 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 330
           Q   +RI+ +  +LL L EK   +   G  L ++  RY   A  +         T +N  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKAKYTYGV-LEKQFRRYYAEANRRP------GKTGDNLV 86

Query: 331 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 462
             L  RL  +V++AG+A++   AR L+   H  V  + VNVPSF V
Sbjct: 87  ILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKV 132

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>RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/97 (26%), Positives = 45/97 (46%)
 Frame = +1

Query: 166 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 345
           SR    +++ + L+EK   R   G    + +    +  +       VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLL----QLLEMRL 91

Query: 346 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
             ++F+ GMA +I  AR L+   HI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSY 128

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>RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

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>RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

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>RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/94 (26%), Positives = 44/94 (46%)
 Frame = +1

Query: 175 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 354
           R  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  RKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 355 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           +F+ G+A +I  AR L+  RH+ V    V++PSF
Sbjct: 96  IFRLGLAPTIPGARQLVNHRHVLVNDCTVDIPSF 129

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>RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV+VPSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDVPSF 131

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>RS4_TROWT (Q83GC9) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = +1

Query: 250 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 408
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 409 QRHIRVGRQIVNVPSFMV 462
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

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>RS4_TROW8 (Q83HV1) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = +1

Query: 250 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 408
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 409 QRHIRVGRQIVNVPSFMV 462
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

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>RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +1

Query: 331 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 456
           L  RL  ++F+ G++ +I  AR L+  RHI V  QIV++PS+
Sbjct: 82  LEMRLDNIIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSY 123

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>RS4_STAHJ (Q4L760) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   H+ V  + V++PS+ ++
Sbjct: 102 GLARTRRQARQLVGHGHVEVDGRRVDIPSYSLK 134

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>RS4_STAES (Q8CS54) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

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>RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = +1

Query: 250 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 366
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 367 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 465
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

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>RS4_AQUAE (O66484) 30S ribosomal protein S4|
          Length = 211

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = +1

Query: 265 YGLLAEGQDKLDYVLALTAEN--------FLARRLQTLVFKAGMAKSIHHARVLIRQRHI 420
           YG L E Q K  + +A  ++         +L RRL  +V++ G A +   AR L+   H+
Sbjct: 66  YGGLREKQFKKYFDMASKSKENTGEMLLQYLERRLDNVVYRLGFASTRRQARQLVAHGHV 125

Query: 421 RVGRQIVNVPSFMV 462
            V  + VN+PS++V
Sbjct: 126 LVNGKKVNIPSYLV 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,146,435
Number of Sequences: 219361
Number of extensions: 1828054
Number of successful extensions: 5458
Number of sequences better than 10.0: 391
Number of HSP's better than 10.0 without gapping: 5234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5410
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result