ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15k18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463474.1| Oryza sativa (japonica cultivar-group), predic... 285 9e-74
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 285 9e-74
3dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 285 9e-74
4dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 285 9e-74
5dbj|AK104274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 9e-74
6dbj|AK099116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 9e-74
7dbj|AK059870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 9e-74
8gb|BT016289.1| Zea mays clone Contig122 mRNA sequence 208 2e-50
9gb|AY108629.1| Zea mays PCO100591 mRNA sequence 208 2e-50
10emb|AL669842.11| Mouse DNA sequence from clone RP23-25D18 on chr... 42 2.4
11emb|BX510999.11| Zebrafish DNA sequence from clone CH211-157P22 ... 42 2.4
12dbj|AK039933.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 2.4
13gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 2.4
14ref|NM_192727.1| Oryza sativa (japonica cultivar-group), predic... 40 9.4
15gb|AC169698.1| Rhesus Macaque BAC CH250-254N3 (Children's Hospi... 40 9.4
16gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complet... 40 9.4
17ref|XM_458572.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.4
18gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, c... 40 9.4
19ref|XM_461824.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.4
20gb|AC133906.9| Mus musculus chromosome 14, clone RP24-230P12, co... 40 9.4
21gb|AC118210.6| Mus musculus chromosome 9, clone RP24-124B1, comp... 40 9.4
22gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosom... 40 9.4
23gb|AY271618.1| Oryza sativa (indica cultivar-group) PDR-type ABC... 40 9.4
24emb|AL354685.17| Human DNA sequence from clone RP13-75G22 on chr... 40 9.4
25emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 9.4
26emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 9.4
27emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 40 9.4
28emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC... 40 9.4
29gb|AC099513.3| Homo sapiens chromosome 5 clone RP11-395C3, compl... 40 9.4
30gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 9.4
31gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete s... 40 9.4
32tpg|BK001017.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 40 9.4
33dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
34gb|AC084064.6| Homo sapiens chromosome 16 clone RP11-467I17, com... 40 9.4
35dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
36dbj|AK100135.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
37gb|AC154464.2| Mus musculus BAC clone RP24-146B1 from 16, comple... 40 9.4
38gb|AC154694.2| Mus musculus BAC clone RP24-341A16 from 16, compl... 40 9.4
39gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 ... 40 9.4
40emb|AJ535046.1|OSA535046 Oryza sativa (japonica cultivar-group) ... 40 9.4
41gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.4
42gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, comple... 40 9.4
43gb|AC134578.5| Mus musculus BAC clone RP24-79P21 from 9, complet... 40 9.4
44dbj|AB037688.1| Xenopus laevis Xptch-2 mRNA for patched-2, compl... 40 9.4
45dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.4
46dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.4 
>ref|XM_463474.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 642

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
           ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 351 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 410

                                                                       
Query: 61  caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
           ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 411 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 470

                                                                       
Query: 121 cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
           |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 471 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 530

                                                                       
Query: 181 taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
           |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 531 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 590

                                      
Query: 241 ggaatcagcttatagtgcgtttatggc 267
           ||| || || || |||||||| |||||
Sbjct: 591 ggattcggcgtacagtgcgttcatggc 617
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
                ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 33082995 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 33083054

                                                                            
Query: 61       caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
                ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 33083055 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 33083114

                                                                            
Query: 121      cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
                |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 33083115 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 33083174

                                                                            
Query: 181      taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
                |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 33083175 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 33083234

                                           
Query: 241      ggaatcagcttatagtgcgtttatggc 267
                ||| || || || |||||||| |||||
Sbjct: 33083235 ggattcggcgtacagtgcgttcatggc 33083261



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 336      tgtctttgcatcattcatgc 355
                ||||||||||||||||||||
Sbjct: 24074768 tgtctttgcatcattcatgc 24074749



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 306      ttggttcttctttctgtttt 325
                ||||||||||||||||||||
Sbjct: 12303045 ttggttcttctttctgtttt 12303064
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>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1100D10
          Length = 152997

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
             ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 19905 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 19964

                                                                         
Query: 61    caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
             ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 19965 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 20024

                                                                         
Query: 121   cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
             |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 20025 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 20084

                                                                         
Query: 181   taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
             |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 20085 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 20144

                                        
Query: 241   ggaatcagcttatagtgcgtttatggc 267
             ||| || || || |||||||| |||||
Sbjct: 20145 ggattcggcgtacagtgcgttcatggc 20171
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>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0010B10
          Length = 155263

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
              ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 149223 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 149282

                                                                          
Query: 61     caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
              ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 149283 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 149342

                                                                          
Query: 121    cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
              |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 149343 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 149402

                                                                          
Query: 181    taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
              |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 149403 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 149462

                                         
Query: 241    ggaatcagcttatagtgcgtttatggc 267
              ||| || || || |||||||| |||||
Sbjct: 149463 ggattcggcgtacagtgcgttcatggc 149489
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>dbj|AK104274.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G12, full
           insert sequence
          Length = 905

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
           ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 463 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 522

                                                                       
Query: 61  caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
           ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 523 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 582

                                                                       
Query: 121 cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
           |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 583 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 642

                                                                       
Query: 181 taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
           |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 643 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 702

                                      
Query: 241 ggaatcagcttatagtgcgtttatggc 267
           ||| || || || |||||||| |||||
Sbjct: 703 ggattcggcgtacagtgcgttcatggc 729
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>dbj|AK099116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034E12, full
           insert sequence
          Length = 908

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
           ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 466 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 525

                                                                       
Query: 61  caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
           ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 526 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 585

                                                                       
Query: 121 cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
           |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 586 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 645

                                                                       
Query: 181 taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
           |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 646 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 705

                                      
Query: 241 ggaatcagcttatagtgcgtttatggc 267
           ||| || || || |||||||| |||||
Sbjct: 706 ggattcggcgtacagtgcgttcatggc 732
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>dbj|AK059870.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E10, full
           insert sequence
          Length = 970

 Score =  285 bits (144), Expect = 9e-74
 Identities = 236/267 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgcccagtgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgc 60
           ||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 528 cgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgc 587

                                                                       
Query: 61  caacgaccaggtccgccccctgctccacgacctctccacctccatggggaagctcggtac 120
           ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  |
Sbjct: 588 caacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccc 647

                                                                       
Query: 121 cgtcctgccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgca 180
           |||||||||||| |||||||| |||||||||||||||| |||||||||||| | |||  |
Sbjct: 648 cgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaa 707

                                                                       
Query: 181 taagatgggggctggggacgagctcacagatcagcaggccagacagctcaattttgatct 240
           |||||||||||| ||||| |||||||| || || ||||| || |||||||| || |||||
Sbjct: 708 taagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatct 767

                                      
Query: 241 ggaatcagcttatagtgcgtttatggc 267
           ||| || || || |||||||| |||||
Sbjct: 768 ggattcggcgtacagtgcgttcatggc 794
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>gb|BT016289.1| Zea mays clone Contig122 mRNA sequence
          Length = 948

 Score =  208 bits (105), Expect = 2e-50
 Identities = 194/224 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   tgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgccaacgac 67
           ||||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||| 
Sbjct: 464 tgcgtgcagaccttcatcaccgccatggacgccgtcaagctcaacatgcttgccaacgat 523

                                                                       
Query: 68  caggtccgccccctgctccacgacctctccacctccatggggaagctcggtaccgtcctg 127
           ||||||||||||||||| || ||| || |||| |||||||  | ||||||| || | |||
Sbjct: 524 caggtccgccccctgctgcaggacgtcgccacatccatggccaggctcggttccttgctg 583

                                                                       
Query: 128 ccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgcataagatg 187
           ||||||||||| ||||||||||||||||| ||||||||||| || | ||||||||| |||
Sbjct: 584 ccgcccgactttgaggggaaggtcaaggttaacgagtggcttgccaagctgcataaaatg 643

                                                       
Query: 188 ggggctggggacgagctcacagatcagcaggccagacagctcaa 231
           || || | ||| || ||||| || ||||||||||| ||||||||
Sbjct: 644 ggcgccgcggatgaactcaccgagcagcaggccaggcagctcaa 687
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>gb|AY108629.1| Zea mays PCO100591 mRNA sequence
          Length = 578

 Score =  208 bits (105), Expect = 2e-50
 Identities = 194/224 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   tgcgtccagancttcatcaccgccatggacgccctcaagctcaacatgctcgccaacgac 67
           ||||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||| 
Sbjct: 80  tgcgtgcagaccttcatcaccgccatggacgccgtcaagctcaacatgcttgccaacgat 139

                                                                       
Query: 68  caggtccgccccctgctccacgacctctccacctccatggggaagctcggtaccgtcctg 127
           ||||||||||||||||| || ||| || |||| |||||||  | ||||||| || | |||
Sbjct: 140 caggtccgccccctgctgcaggacgtcgccacatccatggccaggctcggttccttgctg 199

                                                                       
Query: 128 ccgcccgacttcgaggggaaggtcaaggtgaacgagtggctcgcaaggctgcataagatg 187
           ||||||||||| ||||||||||||||||| ||||||||||| || | ||||||||| |||
Sbjct: 200 ccgcccgactttgaggggaaggtcaaggttaacgagtggcttgccaagctgcataaaatg 259

                                                       
Query: 188 ggggctggggacgagctcacagatcagcaggccagacagctcaa 231
           || || | ||| || ||||| || ||||||||||| ||||||||
Sbjct: 260 ggcgccgcggatgaactcaccgagcagcaggccaggcagctcaa 303
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>emb|AL669842.11| Mouse DNA sequence from clone RP23-25D18 on chromosome 11 Contains
             three novel genes, the 3' end of the Ntn1 gene for netrin
             1 and the 3' end of the Stx8 gene for syntaxin 8, complete
             sequence
          Length = 121134

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 203   ctcacagatcagcaggccagacagc 227
             ||||||| |||||||||||||||||
Sbjct: 73995 ctcacagctcagcaggccagacagc 74019
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>emb|BX510999.11| Zebrafish DNA sequence from clone CH211-157P22 in linkage group 5,
            complete sequence
          Length = 160405

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  attgtttcatactcattatag 469
            |||||||||||||||||||||
Sbjct: 4660 attgtttcatactcattatag 4680
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>dbj|AK039933.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430033C09 product:unclassifiable, full
           insert sequence
          Length = 533

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 203 ctcacagatcagcaggccagacagc 227
           ||||||| |||||||||||||||||
Sbjct: 366 ctcacagctcagcaggccagacagc 390
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 403     caacaatgccaatcttatcga 423
               |||||||||||||||||||||
Sbjct: 1079445 caacaatgccaatcttatcga 1079465
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>ref|NM_192727.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4299

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtctttgcatcattcatgc 355
            ||||||||||||||||||||
Sbjct: 2040 tgtctttgcatcattcatgc 2059
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>gb|AC169698.1| Rhesus Macaque  BAC CH250-254N3 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 179377

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   tcttctttctgttttgccat 330
             ||||||||||||||||||||
Sbjct: 52483 tcttctttctgttttgccat 52464
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>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   tcgcttcccattgctggttt 529
             ||||||||||||||||||||
Sbjct: 38337 tcgcttcccattgctggttt 38356
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>ref|XM_458572.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D03091g)
           partial mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 gagttggttcttctttctgt 322
           ||||||||||||||||||||
Sbjct: 132 gagttggttcttctttctgt 113
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>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 576    tttgttaacatgttgtcttt 595
              ||||||||||||||||||||
Sbjct: 170090 tttgttaacatgttgtcttt 170071
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>ref|XM_461824.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G07029g)
           partial mRNA
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 acaacaatgccaatcttatc 421
           ||||||||||||||||||||
Sbjct: 707 acaacaatgccaatcttatc 688
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>gb|AC133906.9| Mus musculus chromosome 14, clone RP24-230P12, complete sequence
          Length = 176220

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 497    tgtgtttatggcctcgcttcccattgct 524
              ||||||||| ||||| ||||||||||||
Sbjct: 105504 tgtgtttattgcctcacttcccattgct 105477
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>gb|AC118210.6| Mus musculus chromosome 9, clone RP24-124B1, complete sequence
          Length = 212813

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   caaggctgcataagatgggg 190
             ||||||||||||||||||||
Sbjct: 47651 caaggctgcataagatgggg 47632
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>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete
             sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ctcacagatcagcaggccag 222
             ||||||||||||||||||||
Sbjct: 92592 ctcacagatcagcaggccag 92573
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>gb|AY271618.1| Oryza sativa (indica cultivar-group) PDR-type ABC transporter 9 mRNA,
            complete cds
          Length = 4700

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtctttgcatcattcatgc 355
            ||||||||||||||||||||
Sbjct: 2059 tgtctttgcatcattcatgc 2078
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>emb|AL354685.17| Human DNA sequence from clone RP13-75G22 on chromosome Xq21.33-22.2
             Contains the gene for a novel protein similar to envelope
             protein (LOC139302), a pseuodgene similar to part of
             NCK-associated protein 1 (NCKAP1) and a CpG island,
             complete sequence
          Length = 155166

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 577   ttgttaacatgttgtctttt 596
             ||||||||||||||||||||
Sbjct: 65418 ttgttaacatgttgtctttt 65437
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    acaacaatgccaatcttatc 421
              ||||||||||||||||||||
Sbjct: 559652 acaacaatgccaatcttatc 559671
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    gagttggttcttctttctgt 322
              ||||||||||||||||||||
Sbjct: 209624 gagttggttcttctttctgt 209605
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>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gttggttcttctttctgttt 324
             ||||||||||||||||||||
Sbjct: 71083 gttggttcttctttctgttt 71102
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>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project)
          Length = 93257

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gttggttcttctttctgttt 324
             ||||||||||||||||||||
Sbjct: 57366 gttggttcttctttctgttt 57385
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>gb|AC099513.3| Homo sapiens chromosome 5 clone RP11-395C3, complete sequence
          Length = 156348

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ttaacatgttgtcttttgac 599
             ||||||||||||||||||||
Sbjct: 60031 ttaacatgttgtcttttgac 60050
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     tgctcttgtctttgcatcat 349
               ||||||||||||||||||||
Sbjct: 4832884 tgctcttgtctttgcatcat 4832903
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>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence
          Length = 120787

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    ttggttcttctttctgtttt 325
              ||||||||||||||||||||
Sbjct: 109338 ttggttcttctttctgtttt 109319
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>tpg|BK001017.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate
            P0410E03.7 PDR3 ABC transporter (pdr3) gene, complete cds
          Length = 6575

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtctttgcatcattcatgc 355
            ||||||||||||||||||||
Sbjct: 3330 tgtctttgcatcattcatgc 3349
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>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E03
          Length = 164839

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tgtctttgcatcattcatgc 355
             ||||||||||||||||||||
Sbjct: 50590 tgtctttgcatcattcatgc 50571
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>gb|AC084064.6| Homo sapiens chromosome 16 clone RP11-467I17, complete sequence
          Length = 189897

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  caacaacaatgccaatctta 419
            ||||||||||||||||||||
Sbjct: 8356 caacaacaatgccaatctta 8337
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>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0426D06
          Length = 162173

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    ttggttcttctttctgtttt 325
              ||||||||||||||||||||
Sbjct: 127671 ttggttcttctttctgtttt 127690
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>dbj|AK100135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G13, full
            insert sequence
          Length = 4227

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtctttgcatcattcatgc 355
            ||||||||||||||||||||
Sbjct: 1548 tgtctttgcatcattcatgc 1567
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>gb|AC154464.2| Mus musculus BAC clone RP24-146B1 from 16, complete sequence
          Length = 143858

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   gtttctagtttgttaacatg 587
             ||||||||||||||||||||
Sbjct: 33258 gtttctagtttgttaacatg 33277
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>gb|AC154694.2| Mus musculus BAC clone RP24-341A16 from 16, complete sequence
          Length = 171564

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    gtttctagtttgttaacatg 587
              ||||||||||||||||||||
Sbjct: 162692 gtttctagtttgttaacatg 162711
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>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete
             sequence
          Length = 292632

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   tcgcttcccattgctggttt 529
             ||||||||||||||||||||
Sbjct: 91007 tcgcttcccattgctggttt 90988
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>emb|AJ535046.1|OSA535046 Oryza sativa (japonica cultivar-group) pdr9 gene for PDR-like ABC
            transporter, exons 1-21
          Length = 6575

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtctttgcatcattcatgc 355
            ||||||||||||||||||||
Sbjct: 3330 tgtctttgcatcattcatgc 3349
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      gaccaggtccgccccctgct 84
               ||||||||||||||||||||
Sbjct: 1971817 gaccaggtccgccccctgct 1971836
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>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence
          Length = 182809

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    gagttggttcttctttctgt 322
              ||||||||||||||||||||
Sbjct: 125112 gagttggttcttctttctgt 125131
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>gb|AC134578.5| Mus musculus BAC clone RP24-79P21 from 9, complete sequence
          Length = 206537

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    caaggctgcataagatgggg 190
              ||||||||||||||||||||
Sbjct: 166068 caaggctgcataagatgggg 166087
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>dbj|AB037688.1| Xenopus laevis Xptch-2 mRNA for patched-2, complete cds
          Length = 4762

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 510 tcgcttcccattgctggtttgtgg 533
           ||||||||||||| ||||||||||
Sbjct: 83  tcgcttcccattgatggtttgtgg 106
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>dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1241F12
          Length = 142424

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   ttctttctgttttgccatgc 332
             ||||||||||||||||||||
Sbjct: 14314 ttctttctgttttgccatgc 14333
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>dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1747F8
          Length = 161402

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   ttctttctgttttgccatgc 332
             ||||||||||||||||||||
Sbjct: 93805 ttctttctgttttgccatgc 93824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,095,334
Number of Sequences: 3902068
Number of extensions: 6095334
Number of successful extensions: 124897
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124588
Number of HSP's gapped (non-prelim): 309
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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