ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15k05 |
|---|---|
| Clone Library Name | barley_pub |
>GUND_CELFI (P50400) Endoglucanase D precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 747 Score = 31.6 bits (70), Expect = 1.7 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 366 QSSHQGKPPHRFWRGETTGDVEDIQEGWEGAAARVAD 476 ++ + G + +W+G+ T ED+ EGWE AA R D Sbjct: 162 EADNSGHVYNMWWKGDIT--TEDVYEGWEWAATRWKD 196
>ITIH4_PIG (P79263) Inter-alpha-trypsin inhibitor heavy chain H4 precursor| (ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain 4) (Inter-alpha-trypsin inhibitor family heavy chain-related protein) (IHRP) (Major acute phase protein) (MAP) Length = 921 Score = 31.2 bits (69), Expect = 2.2 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Frame = +1 Query: 133 QQIALLTAKAWLSADKQLERKVIKLSIENSVLSEYTSMVVLQTNLDAAQKVKQKP--KGH 306 QQ+ T A + K LE + + LS+ S ++ TSMV+ + +V +KP G+ Sbjct: 550 QQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGN 609 Query: 307 KGANE---PLRFQLHGLKLGFGDKAATKENLLTGFGEEKPL 420 + N FQ H + GD+ + LTG P+ Sbjct: 610 RQGNTHSGHSSFQFHSV----GDRTSR----LTGGSSVDPV 642
>ADO_HUMAN (Q06278) Aldehyde oxidase (EC 1.2.3.1)| Length = 1338 Score = 30.8 bits (68), Expect = 2.9 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%) Frame = +1 Query: 106 MPLDNVFAPQQIALLTAKAWLSADKQLERKVIKLSIENSVLS------------EYTSMV 249 +PLD P Q + + + ADKQ +R + S S +Y Sbjct: 208 LPLD----PTQELIFPPELMIMADKQSQRTRVFGSERMMWFSPVTLKDLLEFKFKYPQAP 263 Query: 250 VLQTNLDAAQKVKQKPKGHKGANEPLRFQ--------LHGLKLGFGDKAATKENLLTGFG 405 V+ N +VK K H G N P R + ++GL LG G A +++L Sbjct: 264 VIMGNTSVGPEVKFKGVFHPGYNSPDRIEEPECCKPCIYGLTLGAGLSLAQVKDILADVV 323 Query: 406 EEKPLETLKIF 438 ++ P E +++ Sbjct: 324 QKLPEEKTQMY 334
>SECB_RICTY (Q68XU4) Protein-export protein secB| Length = 152 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 76 IELKVQHIKDMPLDNVFAPQQIALLTAKAWLSADKQLERKVIKLSIEN 219 I + Q+IKD+ L+N AP +A L + + D L+ + LS EN Sbjct: 15 ISVNAQYIKDLSLENPSAPSSLAALDQRPQI--DLSLDINITNLSDEN 60
>SECB_RICPR (Q9ZE76) Protein-export protein secB| Length = 152 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 76 IELKVQHIKDMPLDNVFAPQQIALLTAKAWLSADKQLERKVIKLSIEN 219 I + Q+IKD+ L+N AP +A L + + D L+ + LS EN Sbjct: 15 ISVNAQYIKDLSLENPSAPSSLAALDQRPQI--DLSLDINITNLSEEN 60
>SECB_RICFE (Q4UNF2) Protein-export protein secB| Length = 152 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 76 IELKVQHIKDMPLDNVFAPQQIALLTAKAWLSADKQLERKVIKLSIEN 219 I + Q+IKD+ L+N AP +A L + + D L+ + LS EN Sbjct: 15 ISVNAQYIKDLSLENPSAPSSLAALEQRPQI--DLSLDINITNLSEEN 60
>SECB_RICCN (Q92JG7) Protein-export protein secB| Length = 152 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 76 IELKVQHIKDMPLDNVFAPQQIALLTAKAWLSADKQLERKVIKLSIEN 219 I + Q+IKD+ L+N AP +A L + + D L+ + LS EN Sbjct: 15 ISVNAQYIKDLSLENPSAPSSLAALDQRPQI--DLSLDINITNLSEEN 60
>RPOA1_HALSA (Q9HM79) DNA-directed RNA polymerase subunit A' (EC 2.7.7.6)| Length = 971 Score = 30.0 bits (66), Expect = 5.0 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Frame = +1 Query: 151 TAKAWLSADKQLERKVIKLSIENSVLSEYT-SMVVLQTNLDAAQK-VKQKPKGHKGAN 318 +A+ +S D L ++ + + V +E T +MVV + NL+ A++ V+ P+GH GAN Sbjct: 393 SARTVISPDPTLSLN--EVGVPDRVATEMTQTMVVNEQNLERARRYVRNGPEGHPGAN 448
>GLYG2_SOYBN (P04405) Glycinin G2 precursor [Contains: Glycinin A2 subunit;| Glycinin B1a subunit] Length = 485 Score = 30.0 bits (66), Expect = 5.0 Identities = 27/102 (26%), Positives = 43/102 (42%) Frame = +1 Query: 169 SADKQLERKVIKLSIENSVLSEYTSMVVLQTNLDAAQKVKQKPKGHKGANEPLRFQLHGL 348 S + QL++ + + + E+ Q +QK KQ+ + ++G+N F L Sbjct: 167 SLENQLDQMPRRFYLAGNQEQEFLKYQQQQQGGSQSQKGKQQEEENEGSNILSGFAPEFL 226 Query: 349 KLGFGDKAATKENLLTGFGEEKPLETLKIFKKAGRVLQPALR 474 K FG N L G EE+ + K RV PA+R Sbjct: 227 KEAFGVNMQIVRN-LQGENEEEDSGAIVTVKGGLRVTAPAMR 267
>Y2141_ARCFU (O28141) Hypothetical protein AF2141| Length = 228 Score = 30.0 bits (66), Expect = 5.0 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +1 Query: 325 LRFQLHGLKLGFGDKAATKENLLTGFGEEKPLETLKIFKK 444 +RF + ++ G GD AT E GEE+ + +KIF++ Sbjct: 119 VRFFIEDVERGIGDWKATVERYFRAIGEERAEDFVKIFEE 158
>MYO3_YEAST (P36006) Myosin-3| Length = 1273 Score = 29.6 bits (65), Expect = 6.5 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +1 Query: 253 LQTNLDAAQKVKQKPKGHKGANEPLRFQLHGLKLGFGDKAATKENLL 393 LQ +DAA K+++ + KG N+ ++ + +G KL G K +LL Sbjct: 733 LQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLL 779
>PSD13_MOUSE (Q9WVJ2) 26S proteasome non-ATPase regulatory subunit 13 (26S| proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 Score = 29.6 bits (65), Expect = 6.5 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = +1 Query: 181 QLERKVIKLSIENSVLSEYTSMVVLQTNLDAAQKVKQKPKGHKGANEPLRFQLHGLKLGF 360 + E +V LS+ +L M L +K ++K K A + + LKL Sbjct: 66 EFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI 125 Query: 361 GDKAATKENL 390 GD ATKE + Sbjct: 126 GDLQATKETI 135
>ZN514_HUMAN (Q96K75) Zinc finger protein 514| Length = 400 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +3 Query: 174 RQTTGEKGDKIKHRE*CSFRVHKHGCTSNQFGRSTKSQAETERTQRC 314 RQT G + H E K C N+ G+S Q+E R QRC Sbjct: 186 RQTLGGNNSQRTHPE-------KKSCKCNECGKSFHFQSELRRHQRC 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.133 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,854,429 Number of Sequences: 219361 Number of extensions: 1770416 Number of successful extensions: 5055 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4894 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5052 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
